mRNA_E-fasciculatus_F_contig1620.4222.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1620.4222.1 vs. uniprot
Match: D8LJH8_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJH8_ECTSI) HSP 1 Score: 905 bits (2340), Expect = 0.000e+0 Identity = 472/523 (90.25%), Postives = 483/523 (92.35%), Query Frame = 1
Query: 424 MRGVGAHPDDDVRVAQDRGVPDKLDPCGRCGEAVRFMEFGNNHFFGCSSHPLCKATRKTRKNGAVVELIAEETRPDADAASSSGEGLASVLENADPTGINRCHLCVKVRGGHLGGAAQAAWQLLRRNGIVPAREHGGTANGGG-GISD---NAGSANGAVAMVGTEDLKAVLELGARDAVRRLLNQERMSFRDIPQTTYSRLMASEAGKKPPAPSQARSGKGKARKGTAAAGRLEPREACEVLLYALPAGLRETLLPFQRDGVLYGLRRRGRCLIADEMGTGKTLQALGVMGCYREDWPLLIVAPASMRLMWAEEVERWYPFLAPSQIHLIKGNKDKLYLTNVSRHLWPRVVVVSYFMLRMLSASVGKGDWKAVIFDESHMISTSLGGESAQSQQVTVCRQVAGRAKRVVMLSGTPSLSKPFDLFNQASGIFFLPKREHQHVEALSPGLLGRAPLLKAKQGFAASYCGATMRGQMSRGGHVNRVPFISGSEYPDELHLLLKNEVMIRRLKANVVKQLPPLRQA 1980
MRGVGAHPDDDVR AQDRGVPD LDPCGRCGEAVRFMEFGNN F+GCSSHPLCKATRK+RKNGAVVELIAEETRPDADAASSSGEGL+SVLE ADPTGINRCHLCVKVRGGH+GGAAQAAWQLLRRNGIVP REHGG AN GIS+ NAG +GA A VGTEDLKAVLELGARDAVRRLLNQERMS+RD+PQTTYSRLMASEAGKKPP+PSQARSGKG A K AAGRLEPRE CEVLLY LPAGLRETLLPFQRDGVLYGLRRRGRCLIADEMGTGKTLQALGVMGCYREDWPLLIVAPASMRLMWAEEVERWYPFLAPS+IHLIKGNKDKLYLTNVSRHLWPRVVVVSYFMLRMLSASVGKGDWKAVIFDESHMISTSLGGESAQSQQVTVCRQVAGRAKRVVMLSGTPSLSKPFDLFNQ VEALSPGLLGRAPLLKAKQGFAASYCG TMRGQMSRGGHVNRVPFISGSEYPDELHLLL+NEVMIRRLKANVV QLPPLRQA
Sbjct: 1 MRGVGAHPDDDVRGAQDRGVPDSLDPCGRCGEAVRFMEFGNNQFYGCSSHPLCKATRKSRKNGAVVELIAEETRPDADAASSSGEGLSSVLEEADPTGINRCHLCVKVRGGHIGGAAQAAWQLLRRNGIVPTREHGGAANXXXXGISNSGTNAGGVSGA-ATVGTEDLKAVLELGARDAVRRLLNQERMSYRDVPQTTYSRLMASEAGKKPPSPSQARSGKGWASKD--AAGRLEPREPCEVLLYTLPAGLRETLLPFQRDGVLYGLRRRGRCLIADEMGTGKTLQALGVMGCYREDWPLLIVAPASMRLMWAEEVERWYPFLAPSEIHLIKGNKDKLYLTNVSRHLWPRVVVVSYFMLRMLSASVGKGDWKAVIFDESHMISTSLGGESAQSQQVTVCRQVAGRAKRVVMLSGTPSLSKPFDLFNQ--------------VEALSPGLLGRAPLLKAKQGFAASYCGGTMRGQMSRGGHVNRVPFISGSEYPDELHLLLRNEVMIRRLKANVVNQLPPLRQA 506
BLAST of mRNA_E-fasciculatus_F_contig1620.4222.1 vs. uniprot
Match: D8LJH7_ECTSI (Chromatin remodeling complex subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJH7_ECTSI) HSP 1 Score: 642 bits (1657), Expect = 2.420e-205 Identity = 366/464 (78.88%), Postives = 380/464 (81.90%), Query Frame = 1
Query: 2149 MSEDHRAGLKKVKSASEWVIEKIIASEETLTKFVVFAHHKTVLDRLQEASAFEVQGTRGNTCPFTPRAANDSDDASVGAFSCLRIDGSVPTALRASRLSEFNTNERCRVLVVSITAGGQGLDFTAASNVVFVELPESPAWLRQAEDRLHRRRQEKSVNVYLTVLPAGSHDDTRWLSLSEKLTTQTSVMNGTLDAENIDVDRVFDAGSALDHDGPTHRPSRRXXXXXXXXXXXXXXXXGAIEDAVGDGGCSGSLDXXXXXXXXXXCIELSGSDXXXXXXXXXXXGDMAEET--DLDAELRNALLSTPLDVPTHRPSQSPTFQLLRAIAESPASHPSDSTLPKPNNIFSQAASSNSAERKKKTSSGSPGARGVEGLARWLGRGEGNAKTPRTRGLEDAKGVGKGGARQTKTMTNMDAPAGRSACGAT--SPGVNRKRPRPSSPGSXXXSAKGSPGNPFEAYGHSRR 3528
MS+DHRAGLKKVKSASEWVIEK+IASEETLTKFVVFAHHKTVLDRLQEA FEVQGTRGNTCPFTPRAANDSDDASVGAF+CLRIDGSVPTALRASRLSEFNTNERCRVLVVSITAGGQGLDFTAASNVVFVELPESPAWLRQAEDRLHRRRQEKSVNVYLTVLP GSHDDTRWLSLSEKLTTQTSVMNGTL AENIDVDRV DAGS LDHDGPT RPSRR G EDAVGDGGC+GSLD CIELSGSD XX G +AEET DLDAELRNALLSTPLDVPTHRPSQSPTFQLLRAIAESP + PS ST PKPNNIFSQA +S+SA KKK SS SPGARG EGLARWLGR EG AKTPRT G E GVGKG AR+T T+ NMD+P GR GA SP V+RKRPR S PGS +A SPGNPFE YGH+ R
Sbjct: 1 MSKDHRAGLKKVKSASEWVIEKLIASEETLTKFVVFAHHKTVLDRLQEA--FEVQGTRGNTCPFTPRAANDSDDASVGAFTCLRIDGSVPTALRASRLSEFNTNERCRVLVVSITAGGQGLDFTAASNVVFVELPESPAWLRQAEDRLHRRRQEKSVNVYLTVLPTGSHDDTRWLSLSEKLTTQTSVMNGTLYAENIDVDRVVDAGSTLDHDGPTRRPSRRRGRRAPSSLPTNDSTAGGDEDAVGDGGCTGSLDNDDDAPAS--CIELSGSDDGSEDXXHDDGG-LAEETETDLDAELRNALLSTPLDVPTHRPSQSPTFQLLRAIAESPVAPPSGSTPPKPNNIFSQATTSSSANGKKKMSSTSPGARGDEGLARWLGREEGRAKTPRTGGGE---GVGKG-ARKTTTILNMDSPPGRGTYGAATASPVVSRKRPRSSPPGSG--NAHVSPGNPFETYGHNCR 453
BLAST of mRNA_E-fasciculatus_F_contig1620.4222.1 vs. uniprot
Match: A0A6H5K912_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K912_9PHAE) HSP 1 Score: 368 bits (944), Expect = 8.930e-115 Identity = 216/304 (71.05%), Postives = 225/304 (74.01%), Query Frame = 1
Query: 457 VRVAQDRGVPDKLDPCGRCGEAVRFMEFGNNHFFGCSSHPLCKATRKTRKNGAVVELIAEETRPDADAASSSGEGLASVLENADPTGINRCHLCVKVRGGHLGGAAQAAWQLLRRNGIVPAREHGGT--------ANGGGGISDNAGSANGAVAMVGTEDLKAVLELGARDAVRRLLNQERMSFRDIPQTTYSRLMASEAGKKPPAPSQARSGKGKARKGTAAAGRLEPREACEVLLYALPAGLRETLLPFQRDGVLYGLRRRGRCLIADEMGTGKTLQALGVMGCYREDWPLLIVAPASMRLM 1344
+R AQDRGVPD LDPC RC EAVRF FGC+SHPLCKATRKTRKNGAVVELIAEETRPDADA SSSGEGLASVLE ADPTGINRCHL VKVRGGH+GGAA+AAWQ+LRRNGIVP REHG +N G NAG +GA A VGTEDLKAVLELGARDAVRRLLNQERMS+RDIPQTTYSRLMASEAGKKPPAPSQARSGKG+A K A GRLEPREA E RGR GKTLQALGVMGCYREDWPLLIVAPASMRLM
Sbjct: 1 MRGAQDRGVPDSLDPCARCEEAVRF--------FGCTSHPLCKATRKTRKNGAVVELIAEETRPDADAVSSSGEGLASVLEEADPTGINRCHLRVKVRGGHVGGAAKAAWQMLRRNGIVPTREHGXXXXXXXXXISNNG----TNAGGVSGA-ATVGTEDLKAVLELGARDAVRRLLNQERMSYRDIPQTTYSRLMASEAGKKPPAPSQARSGKGRASKDVA--GRLEPREAYE----------------------------RGR---------GKTLQALGVMGCYREDWPLLIVAPASMRLM 252
BLAST of mRNA_E-fasciculatus_F_contig1620.4222.1 vs. uniprot
Match: A0A328D044_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta australis TaxID=267555 RepID=A0A328D044_9ASTE) HSP 1 Score: 306 bits (783), Expect = 3.220e-85 Identity = 210/574 (36.59%), Postives = 302/574 (52.61%), Query Frame = 1
Query: 1117 PREACEVLLYALPAGLRETLLPFQRDGVLYGLRRRGRCLIADEMGTGKTLQALGVMGCYREDWPLLIVAPASMRLMWAEEVERWYPFLAPSQIHLIKGNKDKLYLTNVSRHLWPRVVVVSYFMLRMLSASVGKGDWKAVIFDESHMISTSLGGESAQSQQVTVCRQVAGRAKRVVMLSGTPSLSKPFDLFNQASGIFFLPKREHQHVEALSPGLLGRAPLLKAKQGFAASYCGATMRGQMSRGGHVNRVPFISGSEYPDELHLLLKNEVMIRRLKANVVKQLPPLRQAPPPSFCSRIVVRVGESGEALKRALKEGGFEADAE-------------VDDEEGGQGRRDERGPGTGAGMMSEDHRAGLKKVKSASEWV-IEKIIAS---EETLT------KFVVFAHHKTVLDRLQEASAFEVQGTRGNTCPFTPRAANDSDDASVGAFSCLRIDGSVPTALRASRLSEFNTNERCRVLVVSITAGGQGLDFTAASNVVFVELPESPAWLRQAEDRLHRRRQEKSVNVYLTVLPAGSHDDTRWLSLSEKLTTQTSVMNGTLDA-ENIDVDRVFDAG 2766
P E L+ LP L +TLLPFQ +G+ +GLRR GRCLIADEMG GKTLQA+ + C+ + P LIV PA +R WAEE+E W L PS IHL+ G++D +++SR PR VV+SY ML+ L S+ + +W +I DESH + S + ++ +++ VA K +++LSGTPSLS+P+D+F+Q + L PGLLG K K FA +YC + Q RG F G+ +ELH+LLK VMIRRLK +V+ QLPP R+ R+V++ + A+ GG + +D++E G +D D G+ K+ EW+ I +I +ET++ K ++FAHH VLD +QE S S +RIDG P R S + F +++ ++ ++ I AGG GL+ +AA NVVF+ELP+ PA ++QAEDR HRR Q+ +VN+Y+ S D+ RW +L++ L +S MNG DA + I+VD V D G
Sbjct: 188 PDEKVNELINGLPKTLLDTLLPFQLEGIRFGLRRGGRCLIADEMGLGKTLQAIAIASCFMNEGPTLIVCPAILRYSWAEELEHWISCL-PSDIHLVFGHQDNP--SHLSRI--PRFVVISYTMLKRLKRSILEHEWAIIIIDESHHLRCSK--KKSEPEEIKAVLDVAVNIKHLILLSGTPSLSRPYDIFHQ--------------INMLWPGLLG-----KTKYDFAKTYCSIRLV-QGCRGKAF--YDFSKGTRL-EELHMLLKQTVMIRRLKEHVLVQLPPKRRQ-----IIRLVLKKSDIAYAVALTEASGGNAPTLDGNMTHAEHTVVKALDEDEDNSGNQD-------CSAKLSDQALGIAKLSGFCEWLSIHPVITEIDGDETVSASCSSHKMIIFAHHHKVLDGVQEF-------------------------VSEKGISYVRIDGHTPAYDRQSAIQSFQSSKELKIAIIGILAGGSGLNLSAAQNVVFLELPKEPAHMQQAEDRAHRRGQKNAVNIYIFCAKDTS-DEVRWQNLNKSLHRVSSTMNGKYDAIQEIEVDVVSDVG 693
BLAST of mRNA_E-fasciculatus_F_contig1620.4222.1 vs. uniprot
Match: A0A2K1L812_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L812_PHYPA) HSP 1 Score: 308 bits (788), Expect = 1.140e-82 Identity = 220/589 (37.35%), Postives = 306/589 (51.95%), Query Frame = 1
Query: 1132 EVLLYALPAGLRETLLPFQRDGVLYGLRRRGRCLIADEMGTGKTLQALGVMGCYREDWPLLIVAPASMRLMWAEEVERWYPFLAPSQIHLIKGNKDKLYLTNVSRHLWPRVVVVSYFMLRMLSASVGKGDWKAVIFDESHMISTSLGGESAQSQQVTVCRQVAGRAKRVVMLSGTPSLSKPFDLFNQASGIFFLPKREHQHVEALSPGLLGRAPLLKAKQGFAASYCGATMRGQMSRGGHVNRVPFISGSEYPDELHLLLKNEVMIRRLKANVVKQLPPLRQ-------APPP-----SFCS-----RIVVRVGESGEALKRALKEGGF-------EADAEVDDEEGGQGRRDERGPGTGAGMMSEDHRAGLKKVKSASEWVIEKIIAS------EETLTKFVVFAHHKTVLDRLQEASAFEVQGTRGNTCPFTPRAANDSDDASVGAFSCLRIDGSVPTALRASRLSEFNTNERCRVLVVSITAGGQGLDFTAASNVVFVELPESPAWLRQAEDRLHRRRQEKSVNVYLTVLPAGSHDDTRWLSLSEKLTTQTSVMNG---TLDAENI-DVDRVFDAGSALDHDGPTH 2796
E LL LP L +TLLPFQ++GV +GL+R GRCL ADEMG GKT+QA+ + CY+E+ LL++ PAS+RL+WA+E+ERW P+L+P +HL+ G K+ L P+VVV S+ ML L S+ W VI DE+H I + + + +V KRVV+L+GTPSLS+PFD+FNQ + L P LLG K K FA +YC Q S GH N + GS EL++LLK VMIRRLK +V+ QLPP R+ AP +F + RI V++GE EA K GF E ++ D EEG + T A ++E G+ K++ EW++ I + E T K ++FAHH VLD +Q + + +G +RIDGS R ++ F + +V +V + AGG GLDF+AA +VVFVELP+S + + QAEDR HRR Q+ SVN+Y+ V G+ DD W SLS L +++ NG TL+ + + D D + L +G H
Sbjct: 233 EQLLLKLPPNLSKTLLPFQKEGVKFGLQRGGRCLFADEMGVGKTIQAIAMASCYKEEGSLLVICPASLRLVWADELERWLPYLSPVDVHLVFGRKNNL----TENMELPKVVVTSFNMLTRLRESMLSRKWGMVIVDEAHNIRCT--SRKVECDETMAVLEVVQYVKRVVLLTGTPSLSRPFDIFNQ--------------INCLWPNLLG-----KNKYEFARNYCDR----QWSPCGHSNFKDYSRGSRLT-ELNVLLKQTVMIRRLKEDVMMQLPPKRRQLICLQLAPSDVKEAKAFTAANARERISVQLGE--EACKCGFTRKGFCDCEDENEDESHADSEEG----ENPLASKTSARSLTEQE-VGVAKLRGFQEWLLNNSIFADRESQDEATREKIIIFAHHLKVLDTIQ--TFVQSKGVE-----------------------YVRIDGSTLPQDRLKNVNRFRSQREVKVAIVGLQAGGVGLDFSAAQSVVFVELPKSASEMLQAEDRAHRRGQKNSVNIYIFVAK-GTADDRHWQSLSRSLERVSTMTNGAETTLEIDCVVDTDDTYRQTRMLSSNGDNH 758
BLAST of mRNA_E-fasciculatus_F_contig1620.4222.1 vs. uniprot
Match: A0A484M026_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484M026_9ASTE) HSP 1 Score: 308 bits (789), Expect = 1.330e-82 Identity = 213/574 (37.11%), Postives = 305/574 (53.14%), Query Frame = 1
Query: 1117 PREACEVLLYALPAGLRETLLPFQRDGVLYGLRRRGRCLIADEMGTGKTLQALGVMGCYREDWPLLIVAPASMRLMWAEEVERWYPFLAPSQIHLIKGNKDKLYLTNVSRHLWPRVVVVSYFMLRMLSASVGKGDWKAVIFDESHMISTSLGGESAQSQQVTVCRQVAGRAKRVVMLSGTPSLSKPFDLFNQASGIFFLPKREHQHVEALSPGLLGRAPLLKAKQGFAASYCGATMRGQMSRGGHVNRVPFISGSEYPDELHLLLKNEVMIRRLKANVVKQLPPLRQAPPPSFCSRIVVRVGESGEALKRALKEGGF-------EADAE------VDDEEGGQGRRDERGPGTGAGMMSEDHRAGLKKVKSASEWV-IEKIIAS---EETLT------KFVVFAHHKTVLDRLQEASAFEVQGTRGNTCPFTPRAANDSDDASVGAFSCLRIDGSVPTALRASRLSEFNTNERCRVLVVSITAGGQGLDFTAASNVVFVELPESPAWLRQAEDRLHRRRQEKSVNVYLTVLPAGSHDDTRWLSLSEKLTTQTSVMNGTLDA-ENIDVDRVFDAG 2766
P E L+ LP L +TLLPFQ +G+ +GLRR GRCLIADEMG GKTLQA+ + C+ + P LIV PA +R WAEE+E W L PS IHL+ G++D +++SR PR VV+SY ML+ L S+ +W +I DESH + S + ++ +++ VA KR+++LSGTPSLS+P+D+F+Q + L PGLLG K K FA +YC + Q RG F G+ +ELH+LLK VMIRRLK +V+ QLPP R+ R+V++ + A+ GG DAE ++++E G +D + D G+ K+ EW+ I +I +ET++ K ++FAHH VLD +QE S S +RIDG P R S + F +++ ++ ++ I AGG GL+ +AA NVVF+ELP+ PA ++QAEDR HRR Q+ +VN+Y+ S D+ RW +L++ L +S MNG DA + I+VD V D G
Sbjct: 462 PDEKVNELINRLPKTLLDTLLPFQLEGIRFGLRRGGRCLIADEMGLGKTLQAIAIASCFMNEGPTLIVCPAILRYSWAEELEHWISCL-PSDIHLVFGHQDNP--SHLSRI--PRFVVISYTMLKRLKRSILDHEWAIIIIDESHHLRCSK--KKSEPEEIKAVLDVAVNIKRLILLSGTPSLSRPYDIFHQ--------------INMLWPGLLG-----KTKYDFAKTYCSIRLV-QGCRGKAF--YDFSKGTRL-EELHMLLKQTVMIRRLKEHVLVQLPPKRRQ-----IIRLVLKKSDIAYAVALTEASGGNAPTLDGNRTDAENTVVNALEEDEDNSGNQD-------CSVKLSDQALGIAKLSGFCEWLSIHPVITEIDGDETVSASCSSHKMIIFAHHHKVLDGVQEF-------------------------VSEKGISYVRIDGHTPAYDRQSAIQSFQSSKELKIAIIGILAGGSGLNLSAAQNVVFLELPKEPAHMQQAEDRAHRRGQKNAVNIYIFCAKDTS-DEVRWQNLNKSLHRVSSTMNGKYDAIQEIEVDVVSDVG 967
BLAST of mRNA_E-fasciculatus_F_contig1620.4222.1 vs. uniprot
Match: UPI001BF83B96 (Uncharacterized protein n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001BF83B96) HSP 1 Score: 296 bits (759), Expect = 1.920e-82 Identity = 201/548 (36.68%), Postives = 291/548 (53.10%), Query Frame = 1
Query: 1123 EACEVLLYALPAGLRETLLPFQRDGVLYGLRRRGRCLIADEMGTGKTLQALGVMGCYREDWPLLIVAPASMRLMWAEEVERWYPFLAPSQIHLIKGNKDKLYLTNVSRHLWPRVVVVSYFMLRMLSASVGKGDWKAVIFDESHMISTSLGGESAQSQQVTVCRQVAGRAKRVVMLSGTPSLSKPFDLFNQASGIFFLPKREHQHVEALSPGLLGRAPLLKAKQGFAASYCGATMRGQMSRGGHVNRVPFISGSEYPDELHLLLKNEVMIRRLKANVVKQLPPLRQAPPPSFCSRIVVRVGESGEALKRALKEGGFEADAEVDDEEGGQG--RRDERGPGTGAGMMSEDHRAGLKKVKSASEWV-IEKIIASEETLT---------KFVVFAHHKTVLDRLQEASAFEVQGTRGNTCPFTPRAANDSDDASVGAFSCLRIDGSVPTALRASRLSEFNTNERCRVLVVSITAGGQGLDFTAASNVVFVELPESPAWLRQAEDRLHRRRQEKSVNVYLTVLPAGSHDDTRWLSLSEKLTTQTSVMNGTLDA 2730
E + L+ LP L +TLLPFQ +GV +GLRR GRCLIADEMG GKTLQA+ + GC+ + +L+V PA +R WAEE+ERW PF P+ IHL+ G++D PRVVV+SY ML L S+ + +W +I DESH + S ++++ +++ +A + KR+V+LSGTPSLS+P+D+F+Q + L PGLLG K K FA +YC A Q S+G F G +EL++LL VMIRRLK V+KQLPP R+ R++++ + A G ++ V D+ Q D+ G +G +S G+ K+ EW+ I ++A ++ K ++FAHH VLD +QE + S +RIDG+ R S + F ++ +V ++ ITAGG GLDF++A NVVF+ELP+SP+ + QAEDR HRR Q +VN+Y+ G+ D++ W L+ L +S NG DA
Sbjct: 186 EKVDELVGKLPKTLVDTLLPFQLEGVRFGLRRGGRCLIADEMGLGKTLQAIAIAGCFMNEGSILVVCPAILRYSWAEELERWLPFCLPADIHLVFGHRDNPAHVKTC----PRVVVISYTMLHRLRKSILEQEWAFLIVDESHHVRCSK--KASEPEEIKAVLDMAIKVKRIVLLSGTPSLSRPYDIFHQ--------------IHILWPGLLG-----KNKYEFAKTYC-AVQVVQSSQGKFYQ--DFSKGIRL-EELNVLLTQTVMIRRLKERVLKQLPPKRRQ-----IIRLLLKRSDIVSAKAAIRVVNGDASEKSVADDMNSQNLDEYDDCGDFCRSGKLSYQE-LGIAKLSGFREWLSIHPLVAESDSTEVLDLHSSSHKMIIFAHHHKVLDGIQEFVCEK-------------------------GISFVRIDGNTLARDRQSAVLSFKSSTEVKVAIIGITAGGIGLDFSSAQNVVFLELPKSPSLMLQAEDRAHRRGQTSAVNIYI-FCAKGTLDESHWSYLNRSLRHISSTTNGKYDA 672
BLAST of mRNA_E-fasciculatus_F_contig1620.4222.1 vs. uniprot
Match: A0A5J4Y511_9CHLO (SNF2 family DNA-dependent ATPase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y511_9CHLO) HSP 1 Score: 308 bits (788), Expect = 3.580e-82 Identity = 211/570 (37.02%), Postives = 288/570 (50.53%), Query Frame = 1
Query: 1105 GRLEPREACEVLLYALPAGLRETLLPFQRDGVLYGLRRRGRCLIADEMGTGKTLQALGVMGCYREDWPLLIVAPASMRLMWAEEVERWYPFLAPSQIHLIKGNKDKLYLTNVSRHLWPRVVVVSYFMLRMLSASVGKG---------------------DWKAVIFDESHMISTSLGGESAQSQQVTVCRQVAGRAKRVVMLSGTPSLSKPFDLFNQASGIFFLPKREHQHVEALSPGLLGRAPLLKAKQGFAASYCGATMRGQMSRGGHVNRVPFISGSEYPDELHLLLKNEVMIRRLKANVVKQLPPLRQAPPPSFCSRIVVRVGESGEALKRALKEGGFEADAEVDDEEGGQGRRDERGPGTGAGMMSEDHRAGLKKVKSASEWVIEKIIASE--------------ETLTKFVVFAHHKTVLDRLQEASAFEVQGTRGNTCPFTPRAANDSDDASVGAFSCLRIDGSVPTALRASRLSEFNTNERCRVLVVSITAGGQGLDFTAASNVVFVELPESPAWLRQAEDRLHRRRQEKSVNVYLTVLPAGSHDDTRWLSLSEKLTTQTSV 2709
GR E ++P LR+ L+PFQR GV + LRR GR L+ADEMG GKT+QA+ + CYRE+WPLLI+ PAS+RL+WAEE+E+W P L PS IH+I+G D+L ++ P V + SY M++ L+ KG WK +I DESH + TS A+ + V R+ R + L+GTPSLS+PFDLF Q V+AL PGLLG K + F+ YCG + + R G + +G ELH LLK E+M+RRLK +V+ +LPP R R VVR+ A + + DAE E G+ MS+ H+ GL K+ + EW+I + A+ E KF++FAHHK V+ +L A ++G +G G +RIDG + R + +F + R ++SITA G GLDF+AAS VVFVELP+ A +RQAEDR HR Q+ SVNVY V G+ D+ RW +LS L T+V
Sbjct: 303 GRRASESEAEERFSSMPYHLRQALMPFQRAGVQFALRREGRTLLADEMGVGKTVQAIAIASCYREEWPLLIIVPASLRLVWAEELEKWLPHLRPSSIHVIEGKSDRLQGADL-----PAVCITSYEMMQRLTCDACKGIDGRPVVLTACAGSQHCLASKGWKIIIADESHTLRTSEKPPDARHTEAAV--SAVRRSHRAIFLTGTPSLSRPFDLFRQ--------------VDALRPGLLG-----KDRAAFSYRYCGRRLI-PVGRHGSNTKKYDNTGLSRAGELHALLKEELMLRRLKRDVMAELPPKR---------RQVVRLPRPKPADWPSQE---VPEDAEDSGSEAXXXXXXXXXXLRGSEAMSKSHQTGLAKLPNGLEWLINALGAARQGSKGGVESQGEGAEPAPKFLIFAHHKDVMSKLANA----LEGGQGKE--------------GWGGVPYVRIDGETDSRDRRTACLQFKEDPSIRAALLSITAAGTGLDFSAASAVVFVELPQEVALVRQAEDRAHRHGQKLSVNVYFLVAK-GTSDEHRWQALSRSLERVTAV 814
BLAST of mRNA_E-fasciculatus_F_contig1620.4222.1 vs. uniprot
Match: UPI00053C336E (DNA annealing helicase and endonuclease ZRANB3 isoform X1 n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C336E) HSP 1 Score: 304 bits (778), Expect = 5.680e-82 Identity = 212/588 (36.05%), Postives = 303/588 (51.53%), Query Frame = 1
Query: 1117 PREACEVLLYALPAGLRETLLPFQRDGVLYGLRRRGRCLIADEMGTGKTLQALGVMGCYREDWPLLIVAPASMRLMWAEEVERWYPFLAPSQIHLIKGNKDK-LYLTNVSRHLWPRVVVVSYFMLRMLSASVGKGDWKAVIFDESHMISTSLGGESAQSQQVTVCRQVAGRAKRVVMLSGTPSLSKPFDLFNQASGIFFLPKREHQHVEALSPGLLGRAPLLKAKQGFAASYCGATMRGQMSRGGHVNRVPFISGSEYPD--------ELHLLLKNEVMIRRLKANVVKQLPPLRQAPPPSFCSRIVVRVGESG--EALKRALKEGGFEADAEVDDEEGGQGRRDERGPGTGAGMMSED------------------HRAGLKKVKSASEWV-IEKIIASEETL----------TKFVVFAHHKTVLDRLQEASAFEVQGTRGNTCPFTPRAANDSDDASVGAFSCLRIDGSVPTALRASRLSEFNTNERCRVLVVSITAGGQGLDFTAASNVVFVELPESPAWLRQAEDRLHRRRQEKSVNVYLTVLPAGSHDDTRWLSLSEKLTTQTSVMNGTLDA-ENIDVDRVF 2757
P E E L+ LP L +LLPFQ DG+ +GLRR GRCLIADEMG GKTLQA+ + GC+ + +L+V PA +R WAEE+ERW PF PS IHL+ G+++ +YL+ WP++VV+SY ML+ L ++ + +W +I DESH + S ++ ++ VA AKR+V+LSGTPSLS+PFD+F+Q + L PGLLG K K FA +YC + V + G + D EL++LLK VMIRRLK +V+ QLPP R+ + + + ++ EA ++A KE +A + EE G G G + SED G+ K+ +W + +I + + TK VVFAHH VLD +QE + D V RIDG+ R + F + +V ++ I AGG GLDF+AA NVVFVELP++P+ + QAEDR HRR Q+ +VNVY+ + D++RW +L++KL +S +G DA +I+VD V+
Sbjct: 187 PDEKVEELIGNLPRKLLNSLLPFQLDGLRFGLRRGGRCLIADEMGLGKTLQAIAIAGCFMNEGSILVVCPAVLRFSWAEELERWLPFCLPSDIHLVFGHQNNPVYLSR-----WPKIVVISYTMLQHLRKTMLEREWALLIVDESHHLRCSK--TKSEPAEIKTVLDVAENAKRIVLLSGTPSLSRPFDIFHQ--------------INMLWPGLLG-----KDKYEFAKTYC------------DIGFVKGLQGKVFQDFSKGIRLQELNVLLKQTVMIRRLKQHVLTQLPPKRRQIVTILLKKSDIALAKAAVSEAHQKAYKENVVITEANKNSEEPHAGNA--CGENKGGDVSSEDLGSPNPVTDNQLCGKLSYQELGIAKLSGFRDWFSLHPLIPESDNIPEEADGNTSSTKMVVFAHHHKVLDGIQEFIC-------------------EKDICFV------RIDGTTLPRDRQLAVQSFRSCSEVKVAIIGIEAGGVGLDFSAAQNVVFVELPQTPSLMLQAEDRAHRRGQKSAVNVYI-FCAKDTRDESRWKNLNKKLHRVSSTTDGKYDAVTHIEVDDVY 708
BLAST of mRNA_E-fasciculatus_F_contig1620.4222.1 vs. uniprot
Match: A0A067ETM0_CITSI (Uncharacterized protein n=7 Tax=Citrus TaxID=2706 RepID=A0A067ETM0_CITSI) HSP 1 Score: 297 bits (761), Expect = 8.070e-81 Identity = 201/548 (36.68%), Postives = 291/548 (53.10%), Query Frame = 1
Query: 1123 EACEVLLYALPAGLRETLLPFQRDGVLYGLRRRGRCLIADEMGTGKTLQALGVMGCYREDWPLLIVAPASMRLMWAEEVERWYPFLAPSQIHLIKGNKDK-LYLTNVSRHLWPRVVVVSYFMLRMLSASVGKGDWKAVIFDESHMISTSLGGESAQSQQVTVCRQVAGRAKRVVMLSGTPSLSKPFDLFNQASGIFFLPKREHQHVEALSPGLLGRAPLLKAKQGFAASYCGA-TMRGQMSRGGHVNRVPFISGSEYPDELHLLLKNEVMIRRLKANVVKQLPPLRQAPPPSFCSRIVVRVGESGEALKRALKEGGFEADAEVDDEEGGQGRRDERGPGTGAGMMSEDHRAGLKKVKSASEWV-IEKIIASEETLT---------KFVVFAHHKTVLDRLQEASAFEVQGTRGNTCPFTPRAANDSDDASVGAFSCLRIDGSVPTALRASRLSEFNTNERCRVLVVSITAGGQGLDFTAASNVVFVELPESPAWLRQAEDRLHRRRQEKSVNVYLTVLPAGSHDDTRWLSLSEKLTTQTSVMNGTLDA 2730
E + ++ LP L + +LPFQ +GV +GLRR GRCLIADEMG GKTLQA+ + C+ +L+V PA +RL WAEE+ERW PF P+ IHL+ G+++ ++LT +PRVVV+SY ML L S+ + DW +I DESH + S +++ ++V VA + KR+V+LSGTPSLS+P+D+F+Q + L PGLLG KAK FA +YC T++G G + + F G +EL++LLK VMIRRLK +++ QLPP R+ R++++ E A E DA D D+ G G +S G+ K+ EW+ I +IA + K ++FAHH VLD +QE S +RIDG+ R S + F + ++ ++ ITAGG GLDF++A NVVF+ELP+SP+ + QAEDR HRR Q +VN+Y+ + D++ W +L++ L +S NG DA
Sbjct: 184 EVVDEMIGKLPKSLLDVILPFQLEGVRFGLRRGGRCLIADEMGLGKTLQAIAIAACFISAGSILVVCPAILRLSWAEELERWLPFCLPADIHLVFGHRNNPVHLTR-----FPRVVVISYTMLHRLRKSMIEQDWALLIVDESHHVRCSK--RTSEPEEVKAVLDVAAKVKRIVLLSGTPSLSRPYDIFHQ--------------INMLWPGLLG-----KAKYDFAKTYCDVKTVQGYQ---GQLFQ-DFSKGVRL-EELNVLLKQTVMIRRLKQHLLVQLPPKRRQ-----IIRLLLKRSEIVSAKAAVGVINDSEKDATNDKTPKDSDEHDDSGACCRLGKISYQE-LGIAKLSGFREWLSIHPVIAESDGAADIDVNPRSNKMIIFAHHLKVLDGVQEF-------------------------ISEKGIGFVRIDGNTLPRDRQSAVHSFQLSNEVKIAIIGITAGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQTSAVNIYI-FCAKDTTDESHWQNLNKSLRCVSSATNGKYDA 668 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1620.4222.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1620.4222.1 >prot_E-fasciculatus_F_contig1620.4222.1 ID=prot_E-fasciculatus_F_contig1620.4222.1|Name=mRNA_E-fasciculatus_F_contig1620.4222.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=1271bp MDIDDEDPAWLEACMAVVDSLPAANLQSTSSNQGTTTAVLAPAIAAVGSNback to top mRNA from alignment at E-fasciculatus_F_contig1620:2..14813- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1620.4222.1 ID=mRNA_E-fasciculatus_F_contig1620.4222.1|Name=mRNA_E-fasciculatus_F_contig1620.4222.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=14812bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1620:2..14813- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1620:2..14813- >mRNA_E-fasciculatus_F_contig1620.4222.1 ID=mRNA_E-fasciculatus_F_contig1620.4222.1|Name=mRNA_E-fasciculatus_F_contig1620.4222.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=7626bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1620:2..14813- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |