mRNA_E-fasciculatus_F_contig16193.4219.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig16193.4219.1 vs. uniprot
Match: D7G926_ECTSI (Transmembrane 9 superfamily member n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G926_ECTSI) HSP 1 Score: 293 bits (749), Expect = 3.270e-94 Identity = 146/151 (96.69%), Postives = 150/151 (99.34%), Query Frame = 1
Query: 1 YPMLFCVLVGTGVQLLCMGIVTIAFAAIGFVNPSNRGSLAVSMLLLYVLMGVPAGYSSSVLYKSFKGRQWQQCTLLTALLFPSLCFTVFLSLNLMSQKYHSTQAVPFVEIIEVLALWFCISVPMVFLGAYFGYRKPVEAYPVVTSNIPRQV 453
YPMLFCVLVGTGVQLLCMGIVTIAFAAIGFVNPSNRGSLAVSMLLLYVLMGVPAGYSSSVLYKSFKGRQWQQCTLLTALLFPSLCFT+FLSLNLMSQ+YHSTQAVPFVEII+VLALWFCISVPMVFLGAYFGYRKPVE YPVVTSNIPRQ+
Sbjct: 294 YPMLFCVLVGTGVQLLCMGIVTIAFAAIGFVNPSNRGSLAVSMLLLYVLMGVPAGYSSSVLYKSFKGRQWQQCTLLTALLFPSLCFTIFLSLNLMSQRYHSTQAVPFVEIIKVLALWFCISVPMVFLGAYFGYRKPVEPYPVVTSNIPRQI 444
BLAST of mRNA_E-fasciculatus_F_contig16193.4219.1 vs. uniprot
Match: A0A7S2SNH7_9STRA (Transmembrane 9 superfamily member (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNH7_9STRA) HSP 1 Score: 184 bits (468), Expect = 1.790e-56 Identity = 88/152 (57.89%), Postives = 120/152 (78.95%), Query Frame = 1
Query: 4 PMLFCVLVGTGVQLLCMGIVTIAFAAIGFVNPSNRGSLAVSMLLLYVLMGVPAGYSSSVLYKSFKGRQWQQCTLLTALLFPSLCFTVFLSLNLMSQKYHSTQAVPFVEIIEVLALWFCISVPMVFLGAYFGYRKPVEAYPVV--TSNIPRQV 453
PMLFCV VGTGVQL M ++TIAF+AIGF++P+NRGSL ++MLLLYV+MG AGY S+ LYK+F+G++WQ+CT+LTA L+P +CF +F NL+ Y S+ AVPF+ ++ +++LWF ISVP+VFLGAY G+RK V +PV N+PRQ+
Sbjct: 19 PMLFCVFVGTGVQLFYMAVITIAFSAIGFLSPANRGSLMIAMLLLYVVMGAFAGYYSANLYKTFRGKEWQRCTMLTAFLYPGVCFLIFFIFNLVLWSYGSSGAVPFLSMLAIVSLWFGISVPLVFLGAYIGFRKEVMEFPVHPRADNMPRQI 170
BLAST of mRNA_E-fasciculatus_F_contig16193.4219.1 vs. uniprot
Match: A0A835ZB63_9STRA (Transmembrane 9 superfamily member n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB63_9STRA) HSP 1 Score: 195 bits (496), Expect = 2.370e-56 Identity = 95/151 (62.91%), Postives = 120/151 (79.47%), Query Frame = 1
Query: 1 YPMLFCVLVGTGVQLLCMGIVTIAFAAIGFVNPSNRGSLAVSMLLLYVLMGVPAGYSSSVLYKSFKGRQWQQCTLLTALLFPSLCFTVFLSLNLMSQKYHSTQAVPFVEIIEVLALWFCISVPMVFLGAYFGYRKPVEAYPVVTSNIPRQV 453
YPMLFCV+VGTG QL+ TI FAAIGF++P+NRGSL +++LLLYVL G AGY S+V+YK+FKGR++Q CTLLTAL +P +CF+VF L++ S Y STQAVPF+ + +L LWF IS+P+VFLGAY GYR+P YPV TSNIPRQ+
Sbjct: 344 YPMLFCVMVGTGAQLIAGAFATIVFAAIGFLSPANRGSLMIAVLLLYVLFGGVAGYVSAVVYKAFKGRKYQACTLLTALAYPGVCFSVFFMLDIASWSYGSTQAVPFLTMAALLLLWFGISMPLVFLGAYLGYRRPALEYPVETSNIPRQI 494
BLAST of mRNA_E-fasciculatus_F_contig16193.4219.1 vs. uniprot
Match: W7U2W1_9STRA (Transmembrane 9 superfamily member n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U2W1_9STRA) HSP 1 Score: 190 bits (483), Expect = 1.610e-54 Identity = 90/151 (59.60%), Postives = 122/151 (80.79%), Query Frame = 1
Query: 1 YPMLFCVLVGTGVQLLCMGIVTIAFAAIGFVNPSNRGSLAVSMLLLYVLMGVPAGYSSSVLYKSFKGRQWQQCTLLTALLFPSLCFTVFLSLNLMSQKYHSTQAVPFVEIIEVLALWFCISVPMVFLGAYFGYRKPVEAYPVVTSNIPRQV 453
+PML V+VGTG QLL M TI FAA+GF++P+NRG+L +++LL YVLMG AGY S+ LYK+FKG+QWQ+CT+LTAL +PS+CF+VFL L+ + Y S+ AVPF+E++++L LWF ISVP+VF+GAY GY++ V +PVVTSNIPR +
Sbjct: 335 HPMLLAVMVGTGAQLLMMAFCTIVFAAVGFLSPANRGALMIAVLLTYVLMGSVAGYVSARLYKTFKGKQWQKCTVLTALWYPSICFSVFLCLDFIDVSYGSSGAVPFLEMLKLLTLWFGISVPLVFMGAYLGYKRDVMTFPVVTSNIPRTI 485
BLAST of mRNA_E-fasciculatus_F_contig16193.4219.1 vs. uniprot
Match: A0A7S2SNL2_9STRA (Transmembrane 9 superfamily member n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNL2_9STRA) HSP 1 Score: 187 bits (475), Expect = 2.480e-53 Identity = 89/152 (58.55%), Postives = 122/152 (80.26%), Query Frame = 1
Query: 1 YPMLFCVLVGTGVQLLCMGIVTIAFAAIGFVNPSNRGSLAVSMLLLYVLMGVPAGYSSSVLYKSFKGRQWQQCTLLTALLFPSLCFTVFLSLNLMSQKYHSTQAVPFVEIIEVLALWFCISVPMVFLGAYFGYRKPVEAYPVVTSN-IPRQV 453
YPM+F VL GTG+QLLCM + TIAFAAIGF++P+NRGSL +++L+LYV+MG AGY+S+ LYK+FKG++WQ+CT+ TAL+FP LCF VFL N++ Y ST A+PF ++ ++A+WF ISVP+VFLGAYFGY+ +YP +N IPR++
Sbjct: 340 YPMMFAVLCGTGLQLLCMCLATIAFAAIGFLSPANRGSLVIAILVLYVMMGSIAGYTSARLYKAFKGKEWQRCTVYTALVFPGLCFAVFLFFNVVLWAYGSTGAIPFTSMLALIAMWFGISVPLVFLGAYFGYKMEPMSYPTKQANVIPREI 491
BLAST of mRNA_E-fasciculatus_F_contig16193.4219.1 vs. uniprot
Match: A0A7S0SYK0_9STRA (Transmembrane 9 superfamily member n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SYK0_9STRA) HSP 1 Score: 187 bits (474), Expect = 3.060e-53 Identity = 92/151 (60.93%), Postives = 118/151 (78.15%), Query Frame = 1
Query: 1 YPMLFCVLVGTGVQLLCMGIVTIAFAAIGFVNPSNRGSLAVSMLLLYVLMGVPAGYSSSVLYKSFKGRQWQQCTLLTALLFPSLCFTVFLSLNLMSQKYHSTQAVPFVEIIEVLALWFCISVPMVFLGAYFGYRKPVEAYPVVTSNIPRQV 453
YPMLFCVL+GTGVQL + I FAAIGF++P+NRGS+ + MLL +VLMG AG++S+ LYK+F G+QWQ+CTLLTA LFP + F VF L+++ Y ST AVPF+ ++ VL LWF ISVP+VFLGAYFGY++ +PVVTSNIPRQ+
Sbjct: 332 YPMLFCVLIGTGVQLSICACLLIIFAAIGFLSPANRGSIMMGMLLFFVLMGAFAGFTSARLYKTFHGKQWQRCTLLTATLFPGILFIVFFGLDIIVWFYGSTGAVPFLSMLAVLTLWFGISVPLVFLGAYFGYKRDPIEFPVVTSNIPRQI 482
BLAST of mRNA_E-fasciculatus_F_contig16193.4219.1 vs. uniprot
Match: A0A7S2FBA4_9STRA (Transmembrane 9 superfamily member n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FBA4_9STRA) HSP 1 Score: 186 bits (471), Expect = 7.320e-53 Identity = 83/154 (53.90%), Postives = 120/154 (77.92%), Query Frame = 1
Query: 4 PMLFCVLVGTGVQLLCMGIVTIAFAAIGFVNPSNRGSLAVSMLLLYVLMGVPAGYSSSVLYKSFKGRQWQQCTLLTALLFPSLCFTVFLSLNLMSQKYHSTQAVPFVEIIEVLALWFCISVPMVFLGAYFGYRKPVEAYP-----VVTSNIPRQ 450
PM+F V +GTG+QLLCM ++TI FAA+GF++P+NRGSL +++L+LYV+MG AGYSS+ LYK+FKG++WQ+CT+ TA LFP +CF VF+ N++ YHST A+P + ++ ++ALWF ISVP++FLGA+FGY++ YP V+ +IP Q
Sbjct: 323 PMMFAVFIGTGLQLLCMAVITIGFAAVGFLSPANRGSLVIAVLVLYVMMGAVAGYSSARLYKTFKGKEWQKCTMYTAFLFPGICFLVFVGFNIILSFYHSTAAIPMLSLVALVALWFGISVPLIFLGAFFGYKQEPMKYPTKQLNVIPKHIPEQ 476
BLAST of mRNA_E-fasciculatus_F_contig16193.4219.1 vs. uniprot
Match: A0A7S2DQ66_9STRA (Transmembrane 9 superfamily member n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DQ66_9STRA) HSP 1 Score: 185 bits (469), Expect = 1.780e-52 Identity = 81/146 (55.48%), Postives = 121/146 (82.88%), Query Frame = 1
Query: 1 YPMLFCVLVGTGVQLLCMGIVTIAFAAIGFVNPSNRGSLAVSMLLLYVLMGVPAGYSSSVLYKSFKGRQWQQCTLLTALLFPSLCFTVFLSLNLMSQKYHSTQAVPFVEIIEVLALWFCISVPMVFLGAYFGYRKPVEAYPVVTSN 438
YPM+F V +G+G+QL CM ++TI FAA+GF++P+NRGSL +++L+LYV+MG AG+SS+ LYK+FKG++WQ+CT+ TALLFP +C+T+FL L+L+ YHST ++P + ++ ++ALWF ISVP+VFLGA+FGY++ +YP+ SN
Sbjct: 338 YPMMFAVFIGSGLQLFCMSVITIVFAAVGFLSPANRGSLVIAVLVLYVMMGFVAGHSSARLYKTFKGKEWQKCTVYTALLFPGICYTLFLVLDLILWGYHSTASIPILSMLALVALWFGISVPLVFLGAFFGYKQEPMSYPIKQSN 483
BLAST of mRNA_E-fasciculatus_F_contig16193.4219.1 vs. uniprot
Match: F0Y8I7_AURAN (Transmembrane 9 superfamily member n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8I7_AURAN) HSP 1 Score: 183 bits (465), Expect = 6.280e-52 Identity = 86/150 (57.33%), Postives = 116/150 (77.33%), Query Frame = 1
Query: 4 PMLFCVLVGTGVQLLCMGIVTIAFAAIGFVNPSNRGSLAVSMLLLYVLMGVPAGYSSSVLYKSFKGRQWQQCTLLTALLFPSLCFTVFLSLNLMSQKYHSTQAVPFVEIIEVLALWFCISVPMVFLGAYFGYRKPVEAYPVVTSNIPRQV 453
PMLFCV GTGVQ+L + I FAA GF++P+NRGSLA ++L+L+V+MG PAGY+++ LYK+FKGR WQ+CTL TA +P +CF FLS + M Y ST AVP + ++ +LALWF +SVP+VFLGAY G+++ +YPV+TSNIPR+V
Sbjct: 334 PMLFCVACGTGVQVLLCTTICIVFAAAGFLSPANRGSLATAVLVLFVMMGAPAGYTAATLYKTFKGRLWQKCTLYTAFAYPGVCFVTFLSFDGMLYSYGSTGAVPLLSLLSLLALWFGVSVPLVFLGAYLGFKREPLSYPVITSNIPREV 483
BLAST of mRNA_E-fasciculatus_F_contig16193.4219.1 vs. uniprot
Match: A0A836CR71_9STRA (Transmembrane 9 superfamily member n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR71_9STRA) HSP 1 Score: 184 bits (466), Expect = 7.200e-52 Identity = 90/150 (60.00%), Postives = 120/150 (80.00%), Query Frame = 1
Query: 4 PMLFCVLVGTGVQLLCMGIVTIAFAAIGFVNPSNRGSLAVSMLLLYVLMGVPAGYSSSVLYKSFKGRQWQQCTLLTALLFPSLCFTVFLSLNLMSQKYHSTQAVPFVEIIEVLALWFCISVPMVFLGAYFGYRKPVEAYPVVTSNIPRQV 453
PMLFCV+VGTG QL +VTI F+AIGF++P+NRGSL +++LLLYVL G AGY S++LY+SFKGR+++ CTLLTALL+P +CFT F +L+L+ Y STQAVPF+ + +L LWF +SVP+VFLGA+ GYR+ +PV TSNIPR++
Sbjct: 358 PMLFCVMVGTGAQLTISCLVTIIFSAIGFLSPANRGSLMIAVLLLYVLCGGVAGYVSALLYQSFKGRKYRACTLLTALLYPGVCFTTFFTLDLVVWHYGSTQAVPFLSMAALLLLWFGVSVPLVFLGAFLGYRRAPLEFPVETSNIPREI 507 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16193.4219.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig16193.4219.1 >prot_E-fasciculatus_F_contig16193.4219.1 ID=prot_E-fasciculatus_F_contig16193.4219.1|Name=mRNA_E-fasciculatus_F_contig16193.4219.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=149bp MLFCVLVGTGVQLLCMGIVTIAFAAIGFVNPSNRGSLAVSMLLLYVLMGVback to top mRNA from alignment at E-fasciculatus_F_contig16193:298..1982+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig16193.4219.1 ID=mRNA_E-fasciculatus_F_contig16193.4219.1|Name=mRNA_E-fasciculatus_F_contig16193.4219.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1685bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16193:298..1982+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16193:298..1982+ >mRNA_E-fasciculatus_F_contig16193.4219.1 ID=mRNA_E-fasciculatus_F_contig16193.4219.1|Name=mRNA_E-fasciculatus_F_contig16193.4219.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=894bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16193:298..1982+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |