mRNA_E-fasciculatus_F_contig1616.4203.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1616.4203.1 vs. uniprot
Match: D8LQ51_ECTSI (Hydroxymethylglutaryl-CoA lyase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ51_ECTSI) HSP 1 Score: 596 bits (1536), Expect = 8.650e-210 Identity = 309/335 (92.24%), Postives = 317/335 (94.63%), Query Frame = 1
Query: 214 MIGSHXXXXXXXXXXXXXXSVASPTHRGLRSGAIRWPKSVSLVEVGPRDGLQNEPSTVPTEVKVELIDRLAAAGCKAIEAASFVSPKWVPQMADGGQVLADLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSIVESLERFKPVMEKAKGAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQALANILVALEEGITVLDTSVSGLGGCPYAPGASGNVATEDVVYMLDGMGINTGVDLEMLLDTSLYISDKLGRPPQSRVARAMLAKRS 1218
MIGSH S+ASPTHRGL+ GAIRWPKSVSLVEVGPRDGLQNE STVPTEVKVELIDRLAAAGCKAIEAASFVSPKWVPQMADG QVLA+LGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFS+ANINCSIVESLERFKPVMEKAK AGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLE+LREAGVPLEK+AVHFHDTYGQALANILVALEEGITVLDTSVSGLGGCPYAPGASGNVATEDVVYMLDGMGINTGVDL++LLDTSLYISDKLGRPPQSRVARAMLAKRS
Sbjct: 1 MIGSHRCRRAFASLSATRASIASPTHRGLKCGAIRWPKSVSLVEVGPRDGLQNELSTVPTEVKVELIDRLAAAGCKAIEAASFVSPKWVPQMADGDQVLANLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSSANINCSIVESLERFKPVMEKAKVAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLETLREAGVPLEKVAVHFHDTYGQALANILVALEEGITVLDTSVSGLGGCPYAPGASGNVATEDVVYMLDGMGINTGVDLDLLLDTSLYISDKLGRPPQSRVARAMLAKRS 335
BLAST of mRNA_E-fasciculatus_F_contig1616.4203.1 vs. uniprot
Match: UPI0016659C4E (hydroxymethylglutaryl-CoA lyase n=1 Tax=Tistrella bauzanensis TaxID=657419 RepID=UPI0016659C4E) HSP 1 Score: 410 bits (1054), Expect = 2.940e-137 Identity = 207/298 (69.46%), Postives = 245/298 (82.21%), Query Frame = 1
Query: 322 PKSVSLVEVGPRDGLQNEPSTVPTEVKVELIDRLAAAGCKAIEAASFVSPKWVPQMADGGQVLADLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSIVESLERFKPVMEKAKGAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQALANILVALEEGITVLDTSVSGLGGCPYAPGASGNVATEDVVYMLDGMGINTGVDLEMLLDTSLYISDKLGRPPQSRVARAMLAKR 1215
P V +VEVG RDGLQNE + VPT VK+ LI++LAAAG A+EA +FVSPKWVPQMAD +V+A L R PG +Y LTPN++GLEAAL AGADEVAVF AASEAFS NINC+I ESL+RF+PV++ A+ AG VRGYVSCVLGCPYEG +AP VAEV+ +LLDMGCY VSLGDTIG GTAG L+E++ A VP E++AVHFHDTYGQALANIL ALEEGI V+D+SV+GLGGCPYA GA+GNVATEDV+YML GMGINTGVDL+ +L+ +ISD+LGRPP RV+RAM A+R
Sbjct: 4 PSDVRIVEVGARDGLQNEKAVVPTAVKIALIEQLAAAGLPAVEATAFVSPKWVPQMADHAEVMAGLTRRPGTRYPVLTPNIKGLEAALAAGADEVAVFGAASEAFSKRNINCTIAESLDRFRPVVDAARAAGAEVRGYVSCVLGCPYEGEIAPEKVAEVSKALLDMGCYEVSLGDTIGVGTAGRVHRLIETV-SAVVPRERLAVHFHDTYGQALANILAALEEGIAVVDSSVAGLGGCPYAKGATGNVATEDVLYMLHGMGINTGVDLDAVLEAGWFISDQLGRPPVGRVSRAMRARR 300
BLAST of mRNA_E-fasciculatus_F_contig1616.4203.1 vs. uniprot
Match: A0A1Y5SIC2_9PROT (Hydroxymethylglutaryl-CoA lyase n=1 Tax=Oceanibacterium hippocampi TaxID=745714 RepID=A0A1Y5SIC2_9PROT) HSP 1 Score: 404 bits (1039), Expect = 5.420e-135 Identity = 202/300 (67.33%), Postives = 236/300 (78.67%), Query Frame = 1
Query: 313 IRWPKSVSLVEVGPRDGLQNEPSTVPTEVKVELIDRLAAAGCKAIEAASFVSPKWVPQMADGGQVLADLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSIVESLERFKPVMEKAKGAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQALANILVALEEGITVLDTSVSGLGGCPYAPGASGNVATEDVVYMLDGMGINTGVDLEMLLDTSLYISDKLGRPPQSRVARAMLAK 1212
+ WP V + EVGPRDGLQNE V VK EL+DRL AAG +EAASFVSPKWVPQMA +V+A + R PG +Y ALTPN+RG EAA EAG DEVAVFAAASE FS NINCS+ ESLE F+PV+E AK AGLPVRGYVSCVLGCP++G V PG VA VA +L MGCY VSLGDTIG GT +LE++ +P+EK+ VH+HDTYGQALANIL +LE GI +D+SV+GLGGCPYAPGA+GNVATEDVVYMLDG+GI TG+DLE L+ T+ +ISD+LGRPP SRVARAM A+
Sbjct: 1 MAWPTRVRMFEVGPRDGLQNEKQEVSPAVKAELVDRLVAAGIGTVEAASFVSPKWVPQMAGSAEVMAAIHRVPGARYTALTPNMRGFEAAREAGVDEVAVFAAASEGFSRKNINCSVAESLEMFRPVVEAAKAAGLPVRGYVSCVLGCPFDGDVPPGDVARVAAALYGMGCYEVSLGDTIGVGTPARARAMLEAVA-GDIPVEKIGVHYHDTYGQALANILASLEFGIATIDSSVAGLGGCPYAPGATGNVATEDVVYMLDGLGIETGIDLEALVRTAWWISDRLGRPPVSRVARAMKAR 299
BLAST of mRNA_E-fasciculatus_F_contig1616.4203.1 vs. uniprot
Match: UPI0004212E15 (hydroxymethylglutaryl-CoA lyase n=1 Tax=Azospirillum halopraeferens TaxID=34010 RepID=UPI0004212E15) HSP 1 Score: 403 bits (1036), Expect = 1.330e-134 Identity = 201/296 (67.91%), Postives = 238/296 (80.41%), Query Frame = 1
Query: 313 IRWPKSVSLVEVGPRDGLQNEPSTVPTEVKVELIDRLAAAGCKAIEAASFVSPKWVPQMADGGQVLADLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSIVESLERFKPVMEKAKGAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQALANILVALEEGITVLDTSVSGLGGCPYAPGASGNVATEDVVYMLDGMGINTGVDLEMLLDTSLYISDKLGRPPQSRVARA 1200
+R P V +VEVGPRDGLQNE + VPT VKVEL+DRL+AAG +EA SFVSPKWVPQMAD +V+ + R PG +YA LTPNL+GLE ALEA ADEVAVF AASE+FS NINCSI ESLERF PVME+A+ AG+PVRGYVSCVLGCPYEG +AP AVA VA L++MGCY VSLGDTIG GT G ++ ++ E VP EK+AVHFHDTYGQALANIL ALE G+ V+D+SV+GLGGCPYA GASGNVA+EDV+YML+G+G+ TGVDL+ L+ +I + LGRP S+VARA
Sbjct: 1 MRIPARVRMVEVGPRDGLQNEKTMVPTAVKVELVDRLSAAGLPVVEAGSFVSPKWVPQMADSAEVMQAIARRPGTRYAVLTPNLKGLEGALEARADEVAVFGAASESFSRKNINCSIAESLERFAPVMERARAAGVPVRGYVSCVLGCPYEGEIAPAAVAGVAARLMEMGCYEVSLGDTIGTGTPGKAQAMIAAVAER-VPPEKLAVHFHDTYGQALANILAALEMGVAVVDSSVAGLGGCPYAKGASGNVASEDVLYMLNGLGVETGVDLDALIAAGAFIGEALGRPTASKVARA 295
BLAST of mRNA_E-fasciculatus_F_contig1616.4203.1 vs. uniprot
Match: A0A162KV33_9PROT (Hydroxymethylglutaryl-CoA lyase n=3 Tax=Tistrella TaxID=171436 RepID=A0A162KV33_9PROT) HSP 1 Score: 403 bits (1036), Expect = 1.540e-134 Identity = 201/297 (67.68%), Postives = 239/297 (80.47%), Query Frame = 1
Query: 322 PKSVSLVEVGPRDGLQNEPSTVPTEVKVELIDRLAAAGCKAIEAASFVSPKWVPQMADGGQVLADLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSIVESLERFKPVMEKAKGAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQALANILVALEEGITVLDTSVSGLGGCPYAPGASGNVATEDVVYMLDGMGINTGVDLEMLLDTSLYISDKLGRPPQSRVARAMLAK 1212
P V +VEVG RDGLQNE VPT VK+ELI+RLAAAG A+EA +FVSPKWVPQMAD +V+ L R PG +Y LTPNL+GLE+ALE GADEVAVF AASEAFS NINC+I ESLERF+PV+E+A+ AG VRGYVSCVLGCPYEG + P VAEV+ +L +MGCY VSLGDTIG GTAG L++++ A VP +++AVHFHDTYGQALANIL ALEEGI V+D SV+GLGGCPYA GA+GNVATEDV+YML+GMGI TG+D + +L +ISD+LGRPP RV+RA+ AK
Sbjct: 4 PSEVRIVEVGARDGLQNEKEVVPTAVKIELIERLAAAGLPAVEATAFVSPKWVPQMADHAEVMRGLTRRPGTRYPVLTPNLKGLESALEVGADEVAVFGAASEAFSKRNINCTIAESLERFRPVVERAREAGAQVRGYVSCVLGCPYEGEIDPAKVAEVSKALYEMGCYEVSLGDTIGTGTAGKVKTLIDTV-SAVVPRDRLAVHFHDTYGQALANILAALEEGIAVVDASVAGLGGCPYAKGATGNVATEDVLYMLNGMGIRTGIDFDAVLQAGWFISDQLGRPPAGRVSRALRAK 299
BLAST of mRNA_E-fasciculatus_F_contig1616.4203.1 vs. uniprot
Match: G7Z9X9_AZOL4 (Hydroxymethylglutaryl-CoA lyase n=12 Tax=Azospirillum TaxID=191 RepID=G7Z9X9_AZOL4) HSP 1 Score: 402 bits (1034), Expect = 2.670e-134 Identity = 202/293 (68.94%), Postives = 237/293 (80.89%), Query Frame = 1
Query: 322 PKSVSLVEVGPRDGLQNEPSTVPTEVKVELIDRLAAAGCKAIEAASFVSPKWVPQMADGGQVLADLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSIVESLERFKPVMEKAKGAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQALANILVALEEGITVLDTSVSGLGGCPYAPGASGNVATEDVVYMLDGMGINTGVDLEMLLDTSLYISDKLGRPPQSRVARA 1200
PK V +VEVGPRDGLQNE S VPT VKVEL+DRL+ AG +EAASFVSPKWVPQM D +VLA + R PGV+YAALTPNL+GLE AL A ADEVAVF AASE+FS NINCSI ESL+RF PVME+AK AG+PVRGYVSCVLGCPYEG +AP AVA+VA L MGCY +SLGDTIG GT ++ ++ E VP+EK+AVHFHDTYGQALANIL AL+ G+ V+D+SV+GLGGCPYA GASGNVA+EDV+YML+G+GI TGVDL+ L+ +I D +GRP S+VARA
Sbjct: 4 PKFVRMVEVGPRDGLQNEKSMVPTAVKVELVDRLSDAGLSVVEAASFVSPKWVPQMGDSAEVLAGIARKPGVRYAALTPNLKGLEGALAAKADEVAVFGAASESFSRKNINCSIAESLDRFSPVMEQAKAAGVPVRGYVSCVLGCPYEGEIAPRAVADVAERLFAMGCYEISLGDTIGTGTPTKAQAMIAAVAER-VPVEKIAVHFHDTYGQALANILAALQMGVAVVDSSVAGLGGCPYAKGASGNVASEDVLYMLNGLGIETGVDLDKLIAAGAFIGDAIGRPTASKVARA 295
BLAST of mRNA_E-fasciculatus_F_contig1616.4203.1 vs. uniprot
Match: A0A2U1VHB5_9PROT (Hydroxymethylglutaryl-CoA lyase n=1 Tax=Azospirillum sp. TSO35-2 TaxID=716796 RepID=A0A2U1VHB5_9PROT) HSP 1 Score: 400 bits (1028), Expect = 2.150e-133 Identity = 200/296 (67.57%), Postives = 238/296 (80.41%), Query Frame = 1
Query: 313 IRWPKSVSLVEVGPRDGLQNEPSTVPTEVKVELIDRLAAAGCKAIEAASFVSPKWVPQMADGGQVLADLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSIVESLERFKPVMEKAKGAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQALANILVALEEGITVLDTSVSGLGGCPYAPGASGNVATEDVVYMLDGMGINTGVDLEMLLDTSLYISDKLGRPPQSRVARA 1200
++ P V +VEVGPRDGLQNE + VPT VKVEL+DRL+AAG +EAASFVSPKWVPQM D VLA + R PGV+YAALTPNL+GLE AL A ADEVAVF AASE+FS NINCSI ESL+RF PVME+A+ GLPVRGY+SCVLGCPYEG +AP AVAEVA L MGCY +SLGDTIG GT ++ ++ E VP++K+AVHFHDTYGQALANIL AL+ G+ V+D+SV+GLGGCPYA GASGNVA+EDV+YML+G+GI TGVDL+ L+ +ISD +GRP S+VARA
Sbjct: 1 MQLPNVVRMVEVGPRDGLQNEKTMVPTAVKVELVDRLSAAGLGVVEAASFVSPKWVPQMGDSADVLAGITRKPGVRYAALTPNLKGLEGALAAKADEVAVFGAASESFSQKNINCSIAESLDRFAPVMERARAEGLPVRGYISCVLGCPYEGEIAPKAVAEVAERLFAMGCYEISLGDTIGTGTPAKAQAMITAVAER-VPMDKIAVHFHDTYGQALANILAALQMGVAVVDSSVAGLGGCPYAKGASGNVASEDVLYMLNGLGIETGVDLDRLIAAGAFISDAIGRPTASKVARA 295
BLAST of mRNA_E-fasciculatus_F_contig1616.4203.1 vs. uniprot
Match: A0A4R6UJQ5_9GAMM (Hydroxymethylglutaryl-CoA lyase n=1 Tax=Permianibacter aggregans TaxID=1510150 RepID=A0A4R6UJQ5_9GAMM) HSP 1 Score: 400 bits (1027), Expect = 3.270e-133 Identity = 202/298 (67.79%), Postives = 238/298 (79.87%), Query Frame = 1
Query: 322 PKSVSLVEVGPRDGLQNEPSTVPTEVKVELIDRLAAAGCKAIEAASFVSPKWVPQMADGGQVLADLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSIVESLERFKPVMEKAKGAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQALANILVALEEGITVLDTSVSGLGGCPYAPGASGNVATEDVVYMLDGMGINTGVDLEMLLDTSLYISDKLGRPPQSRVARAMLAKR 1215
P+ V +V+VGPRDGLQNE + V TEVKVELI RLA AG +EA SFVSPKWVPQMAD +V+A + R GV+Y LTPNL+G EAAL AGADEVAVF AASE+FS NINCSI ESLERF PVME AK + VRGYVSCVLGCPYEG +A G VAEVA +LLDMGCY +SLGDTIG GT G +LE++ + VP+ ++AVHFHDTYGQALANI L+ G+ V+D+S++GLGGCPYA GASGNVATEDVVYML+G+GI TG+D+E LLD S +IS +LGR P S+ A+AMLAKR
Sbjct: 4 PQKVKIVDVGPRDGLQNEKTIVSTEVKVELIQRLAEAGLPVVEATSFVSPKWVPQMADNVEVMAKIQRKSGVRYPVLTPNLKGFEAALAAGADEVAVFGAASESFSQKNINCSIKESLERFAPVMEAAKANNVRVRGYVSCVLGCPYEGEIAVGKVAEVAKTLLDMGCYEISLGDTIGVGTPGKARTMLETVAKQ-VPMTQLAVHFHDTYGQALANIFACLQAGVAVVDSSIAGLGGCPYAKGASGNVATEDVVYMLNGLGIETGIDIERLLDVSAFISAQLGREPVSKAAKAMLAKR 300
BLAST of mRNA_E-fasciculatus_F_contig1616.4203.1 vs. uniprot
Match: A0A6A5L0Y2_LUPAL (Hydroxymethylglutaryl-CoA lyase, mitochondrial n=14 Tax=cellular organisms TaxID=131567 RepID=A0A6A5L0Y2_LUPAL) HSP 1 Score: 399 bits (1026), Expect = 4.310e-133 Identity = 200/293 (68.26%), Postives = 238/293 (81.23%), Query Frame = 1
Query: 322 PKSVSLVEVGPRDGLQNEPSTVPTEVKVELIDRLAAAGCKAIEAASFVSPKWVPQMADGGQVLADLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSIVESLERFKPVMEKAKGAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQALANILVALEEGITVLDTSVSGLGGCPYAPGASGNVATEDVVYMLDGMGINTGVDLEMLLDTSLYISDKLGRPPQSRVARA 1200
PK V +VEVGPRDGLQNE + VPT VKVEL++RL+ AG +EAASFVSPKWVPQM D +VLA + R PGV+YAALTPNL+GLE AL A ADEVAVF AASE+FS NINCSI ESL+RF PVME+AK AG+PVRGYVSCVLGCPYEG +AP AVA+VA L MGCY +SLGDTIG GT ++ ++ E VP++K+AVHFHDTYGQALANIL AL+ G+ V+D+SV+GLGGCPYA GASGNVA+EDV+YML+G+GI TGVDL+ L+ +ISD +GRP S+VARA
Sbjct: 4 PKFVRMVEVGPRDGLQNEKTMVPTAVKVELVNRLSDAGLSVVEAASFVSPKWVPQMGDSAEVLAGIARKPGVRYAALTPNLKGLEGALAAKADEVAVFGAASESFSQKNINCSIAESLDRFAPVMEQAKAAGVPVRGYVSCVLGCPYEGEIAPRAVADVAERLFAMGCYEISLGDTIGTGTPTKAQAMIAAVAER-VPVDKIAVHFHDTYGQALANILAALQMGVAVVDSSVAGLGGCPYAKGASGNVASEDVLYMLNGLGIETGVDLDRLIAAGAFISDAIGRPTASKVARA 295
BLAST of mRNA_E-fasciculatus_F_contig1616.4203.1 vs. uniprot
Match: A0A154VJN6_9PROT (Hydroxymethylglutaryl-CoA lyase n=1 Tax=Oceanibaculum pacificum TaxID=580166 RepID=A0A154VJN6_9PROT) HSP 1 Score: 399 bits (1025), Expect = 6.780e-133 Identity = 195/299 (65.22%), Postives = 239/299 (79.93%), Query Frame = 1
Query: 322 PKSVSLVEVGPRDGLQNEPSTVPTEVKVELIDRLAAAGCKAIEAASFVSPKWVPQMADGGQVLADLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSIVESLERFKPVMEKAKGAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQALANILVALEEGITVLDTSVSGLGGCPYAPGASGNVATEDVVYMLDGMGINTGVDLEMLLDTSLYISDKLGRPPQSRVARAMLAKRS 1218
P V +VEVGPRDGLQNE +P VKV LIDRL+AAG +E+ SFVSPKWVPQMAD QVLA + + PG Y L PNL+GLE AL AG +E+AVF AASE+FS NINCSI ESLERF+PV E A+GAG+ VRGYVSCVLGCPYEG +AP AVA V+ +L MGCY VSLGDTIG GT G +L ++ + +P++++AVHFHDTYGQALANI ALEEG++V+D+SV+GLGGCPYA GASGNVATEDVVYML+G+GI TG+D++ L++T+ +ISD LGRPP S+VARA+ K++
Sbjct: 4 PGRVKIVEVGPRDGLQNEAQVIPAAVKVALIDRLSAAGLPVVESGSFVSPKWVPQMADTAQVLAAISKRPGTAYPVLVPNLKGLEVALAAGVEEIAVFGAASESFSQRNINCSIAESLERFRPVAETARGAGIRVRGYVSCVLGCPYEGEIAPEAVAAVSQALFAMGCYEVSLGDTIGVGTPGKAKAMLRAVA-SDIPMDRLAVHFHDTYGQALANIYAALEEGVSVVDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGIETGIDIDALVETAFFISDALGRPPASKVARAIAGKKA 301 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1616.4203.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1616.4203.1 >prot_E-fasciculatus_F_contig1616.4203.1 ID=prot_E-fasciculatus_F_contig1616.4203.1|Name=mRNA_E-fasciculatus_F_contig1616.4203.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=336bp MIGSHRCRRAFASLSARRASVASPTHRGLRSGAIRWPKSVSLVEVGPRDGback to top mRNA from alignment at E-fasciculatus_F_contig1616:1753..5181+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1616.4203.1 ID=mRNA_E-fasciculatus_F_contig1616.4203.1|Name=mRNA_E-fasciculatus_F_contig1616.4203.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3429bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1616:1753..5181+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1616:1753..5181+ >mRNA_E-fasciculatus_F_contig1616.4203.1 ID=mRNA_E-fasciculatus_F_contig1616.4203.1|Name=mRNA_E-fasciculatus_F_contig1616.4203.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2016bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1616:1753..5181+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |