mRNA_E-fasciculatus_F_contig1616.4203.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1616.4203.1
Unique NamemRNA_E-fasciculatus_F_contig1616.4203.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1616.4203.1 vs. uniprot
Match: D8LQ51_ECTSI (Hydroxymethylglutaryl-CoA lyase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ51_ECTSI)

HSP 1 Score: 596 bits (1536), Expect = 8.650e-210
Identity = 309/335 (92.24%), Postives = 317/335 (94.63%), Query Frame = 1
Query:  214 MIGSHXXXXXXXXXXXXXXSVASPTHRGLRSGAIRWPKSVSLVEVGPRDGLQNEPSTVPTEVKVELIDRLAAAGCKAIEAASFVSPKWVPQMADGGQVLADLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSIVESLERFKPVMEKAKGAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQALANILVALEEGITVLDTSVSGLGGCPYAPGASGNVATEDVVYMLDGMGINTGVDLEMLLDTSLYISDKLGRPPQSRVARAMLAKRS 1218
            MIGSH              S+ASPTHRGL+ GAIRWPKSVSLVEVGPRDGLQNE STVPTEVKVELIDRLAAAGCKAIEAASFVSPKWVPQMADG QVLA+LGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFS+ANINCSIVESLERFKPVMEKAK AGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLE+LREAGVPLEK+AVHFHDTYGQALANILVALEEGITVLDTSVSGLGGCPYAPGASGNVATEDVVYMLDGMGINTGVDL++LLDTSLYISDKLGRPPQSRVARAMLAKRS
Sbjct:    1 MIGSHRCRRAFASLSATRASIASPTHRGLKCGAIRWPKSVSLVEVGPRDGLQNELSTVPTEVKVELIDRLAAAGCKAIEAASFVSPKWVPQMADGDQVLANLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSSANINCSIVESLERFKPVMEKAKVAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLETLREAGVPLEKVAVHFHDTYGQALANILVALEEGITVLDTSVSGLGGCPYAPGASGNVATEDVVYMLDGMGINTGVDLDLLLDTSLYISDKLGRPPQSRVARAMLAKRS 335          
BLAST of mRNA_E-fasciculatus_F_contig1616.4203.1 vs. uniprot
Match: UPI0016659C4E (hydroxymethylglutaryl-CoA lyase n=1 Tax=Tistrella bauzanensis TaxID=657419 RepID=UPI0016659C4E)

HSP 1 Score: 410 bits (1054), Expect = 2.940e-137
Identity = 207/298 (69.46%), Postives = 245/298 (82.21%), Query Frame = 1
Query:  322 PKSVSLVEVGPRDGLQNEPSTVPTEVKVELIDRLAAAGCKAIEAASFVSPKWVPQMADGGQVLADLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSIVESLERFKPVMEKAKGAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQALANILVALEEGITVLDTSVSGLGGCPYAPGASGNVATEDVVYMLDGMGINTGVDLEMLLDTSLYISDKLGRPPQSRVARAMLAKR 1215
            P  V +VEVG RDGLQNE + VPT VK+ LI++LAAAG  A+EA +FVSPKWVPQMAD  +V+A L R PG +Y  LTPN++GLEAAL AGADEVAVF AASEAFS  NINC+I ESL+RF+PV++ A+ AG  VRGYVSCVLGCPYEG +AP  VAEV+ +LLDMGCY VSLGDTIG GTAG    L+E++  A VP E++AVHFHDTYGQALANIL ALEEGI V+D+SV+GLGGCPYA GA+GNVATEDV+YML GMGINTGVDL+ +L+   +ISD+LGRPP  RV+RAM A+R
Sbjct:    4 PSDVRIVEVGARDGLQNEKAVVPTAVKIALIEQLAAAGLPAVEATAFVSPKWVPQMADHAEVMAGLTRRPGTRYPVLTPNIKGLEAALAAGADEVAVFGAASEAFSKRNINCTIAESLDRFRPVVDAARAAGAEVRGYVSCVLGCPYEGEIAPEKVAEVSKALLDMGCYEVSLGDTIGVGTAGRVHRLIETV-SAVVPRERLAVHFHDTYGQALANILAALEEGIAVVDSSVAGLGGCPYAKGATGNVATEDVLYMLHGMGINTGVDLDAVLEAGWFISDQLGRPPVGRVSRAMRARR 300          
BLAST of mRNA_E-fasciculatus_F_contig1616.4203.1 vs. uniprot
Match: A0A1Y5SIC2_9PROT (Hydroxymethylglutaryl-CoA lyase n=1 Tax=Oceanibacterium hippocampi TaxID=745714 RepID=A0A1Y5SIC2_9PROT)

HSP 1 Score: 404 bits (1039), Expect = 5.420e-135
Identity = 202/300 (67.33%), Postives = 236/300 (78.67%), Query Frame = 1
Query:  313 IRWPKSVSLVEVGPRDGLQNEPSTVPTEVKVELIDRLAAAGCKAIEAASFVSPKWVPQMADGGQVLADLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSIVESLERFKPVMEKAKGAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQALANILVALEEGITVLDTSVSGLGGCPYAPGASGNVATEDVVYMLDGMGINTGVDLEMLLDTSLYISDKLGRPPQSRVARAMLAK 1212
            + WP  V + EVGPRDGLQNE   V   VK EL+DRL AAG   +EAASFVSPKWVPQMA   +V+A + R PG +Y ALTPN+RG EAA EAG DEVAVFAAASE FS  NINCS+ ESLE F+PV+E AK AGLPVRGYVSCVLGCP++G V PG VA VA +L  MGCY VSLGDTIG GT      +LE++    +P+EK+ VH+HDTYGQALANIL +LE GI  +D+SV+GLGGCPYAPGA+GNVATEDVVYMLDG+GI TG+DLE L+ T+ +ISD+LGRPP SRVARAM A+
Sbjct:    1 MAWPTRVRMFEVGPRDGLQNEKQEVSPAVKAELVDRLVAAGIGTVEAASFVSPKWVPQMAGSAEVMAAIHRVPGARYTALTPNMRGFEAAREAGVDEVAVFAAASEGFSRKNINCSVAESLEMFRPVVEAAKAAGLPVRGYVSCVLGCPFDGDVPPGDVARVAAALYGMGCYEVSLGDTIGVGTPARARAMLEAVA-GDIPVEKIGVHYHDTYGQALANILASLEFGIATIDSSVAGLGGCPYAPGATGNVATEDVVYMLDGLGIETGIDLEALVRTAWWISDRLGRPPVSRVARAMKAR 299          
BLAST of mRNA_E-fasciculatus_F_contig1616.4203.1 vs. uniprot
Match: UPI0004212E15 (hydroxymethylglutaryl-CoA lyase n=1 Tax=Azospirillum halopraeferens TaxID=34010 RepID=UPI0004212E15)

HSP 1 Score: 403 bits (1036), Expect = 1.330e-134
Identity = 201/296 (67.91%), Postives = 238/296 (80.41%), Query Frame = 1
Query:  313 IRWPKSVSLVEVGPRDGLQNEPSTVPTEVKVELIDRLAAAGCKAIEAASFVSPKWVPQMADGGQVLADLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSIVESLERFKPVMEKAKGAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQALANILVALEEGITVLDTSVSGLGGCPYAPGASGNVATEDVVYMLDGMGINTGVDLEMLLDTSLYISDKLGRPPQSRVARA 1200
            +R P  V +VEVGPRDGLQNE + VPT VKVEL+DRL+AAG   +EA SFVSPKWVPQMAD  +V+  + R PG +YA LTPNL+GLE ALEA ADEVAVF AASE+FS  NINCSI ESLERF PVME+A+ AG+PVRGYVSCVLGCPYEG +AP AVA VA  L++MGCY VSLGDTIG GT G    ++ ++ E  VP EK+AVHFHDTYGQALANIL ALE G+ V+D+SV+GLGGCPYA GASGNVA+EDV+YML+G+G+ TGVDL+ L+    +I + LGRP  S+VARA
Sbjct:    1 MRIPARVRMVEVGPRDGLQNEKTMVPTAVKVELVDRLSAAGLPVVEAGSFVSPKWVPQMADSAEVMQAIARRPGTRYAVLTPNLKGLEGALEARADEVAVFGAASESFSRKNINCSIAESLERFAPVMERARAAGVPVRGYVSCVLGCPYEGEIAPAAVAGVAARLMEMGCYEVSLGDTIGTGTPGKAQAMIAAVAER-VPPEKLAVHFHDTYGQALANILAALEMGVAVVDSSVAGLGGCPYAKGASGNVASEDVLYMLNGLGVETGVDLDALIAAGAFIGEALGRPTASKVARA 295          
BLAST of mRNA_E-fasciculatus_F_contig1616.4203.1 vs. uniprot
Match: A0A162KV33_9PROT (Hydroxymethylglutaryl-CoA lyase n=3 Tax=Tistrella TaxID=171436 RepID=A0A162KV33_9PROT)

HSP 1 Score: 403 bits (1036), Expect = 1.540e-134
Identity = 201/297 (67.68%), Postives = 239/297 (80.47%), Query Frame = 1
Query:  322 PKSVSLVEVGPRDGLQNEPSTVPTEVKVELIDRLAAAGCKAIEAASFVSPKWVPQMADGGQVLADLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSIVESLERFKPVMEKAKGAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQALANILVALEEGITVLDTSVSGLGGCPYAPGASGNVATEDVVYMLDGMGINTGVDLEMLLDTSLYISDKLGRPPQSRVARAMLAK 1212
            P  V +VEVG RDGLQNE   VPT VK+ELI+RLAAAG  A+EA +FVSPKWVPQMAD  +V+  L R PG +Y  LTPNL+GLE+ALE GADEVAVF AASEAFS  NINC+I ESLERF+PV+E+A+ AG  VRGYVSCVLGCPYEG + P  VAEV+ +L +MGCY VSLGDTIG GTAG    L++++  A VP +++AVHFHDTYGQALANIL ALEEGI V+D SV+GLGGCPYA GA+GNVATEDV+YML+GMGI TG+D + +L    +ISD+LGRPP  RV+RA+ AK
Sbjct:    4 PSEVRIVEVGARDGLQNEKEVVPTAVKIELIERLAAAGLPAVEATAFVSPKWVPQMADHAEVMRGLTRRPGTRYPVLTPNLKGLESALEVGADEVAVFGAASEAFSKRNINCTIAESLERFRPVVERAREAGAQVRGYVSCVLGCPYEGEIDPAKVAEVSKALYEMGCYEVSLGDTIGTGTAGKVKTLIDTV-SAVVPRDRLAVHFHDTYGQALANILAALEEGIAVVDASVAGLGGCPYAKGATGNVATEDVLYMLNGMGIRTGIDFDAVLQAGWFISDQLGRPPAGRVSRALRAK 299          
BLAST of mRNA_E-fasciculatus_F_contig1616.4203.1 vs. uniprot
Match: G7Z9X9_AZOL4 (Hydroxymethylglutaryl-CoA lyase n=12 Tax=Azospirillum TaxID=191 RepID=G7Z9X9_AZOL4)

HSP 1 Score: 402 bits (1034), Expect = 2.670e-134
Identity = 202/293 (68.94%), Postives = 237/293 (80.89%), Query Frame = 1
Query:  322 PKSVSLVEVGPRDGLQNEPSTVPTEVKVELIDRLAAAGCKAIEAASFVSPKWVPQMADGGQVLADLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSIVESLERFKPVMEKAKGAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQALANILVALEEGITVLDTSVSGLGGCPYAPGASGNVATEDVVYMLDGMGINTGVDLEMLLDTSLYISDKLGRPPQSRVARA 1200
            PK V +VEVGPRDGLQNE S VPT VKVEL+DRL+ AG   +EAASFVSPKWVPQM D  +VLA + R PGV+YAALTPNL+GLE AL A ADEVAVF AASE+FS  NINCSI ESL+RF PVME+AK AG+PVRGYVSCVLGCPYEG +AP AVA+VA  L  MGCY +SLGDTIG GT      ++ ++ E  VP+EK+AVHFHDTYGQALANIL AL+ G+ V+D+SV+GLGGCPYA GASGNVA+EDV+YML+G+GI TGVDL+ L+    +I D +GRP  S+VARA
Sbjct:    4 PKFVRMVEVGPRDGLQNEKSMVPTAVKVELVDRLSDAGLSVVEAASFVSPKWVPQMGDSAEVLAGIARKPGVRYAALTPNLKGLEGALAAKADEVAVFGAASESFSRKNINCSIAESLDRFSPVMEQAKAAGVPVRGYVSCVLGCPYEGEIAPRAVADVAERLFAMGCYEISLGDTIGTGTPTKAQAMIAAVAER-VPVEKIAVHFHDTYGQALANILAALQMGVAVVDSSVAGLGGCPYAKGASGNVASEDVLYMLNGLGIETGVDLDKLIAAGAFIGDAIGRPTASKVARA 295          
BLAST of mRNA_E-fasciculatus_F_contig1616.4203.1 vs. uniprot
Match: A0A2U1VHB5_9PROT (Hydroxymethylglutaryl-CoA lyase n=1 Tax=Azospirillum sp. TSO35-2 TaxID=716796 RepID=A0A2U1VHB5_9PROT)

HSP 1 Score: 400 bits (1028), Expect = 2.150e-133
Identity = 200/296 (67.57%), Postives = 238/296 (80.41%), Query Frame = 1
Query:  313 IRWPKSVSLVEVGPRDGLQNEPSTVPTEVKVELIDRLAAAGCKAIEAASFVSPKWVPQMADGGQVLADLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSIVESLERFKPVMEKAKGAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQALANILVALEEGITVLDTSVSGLGGCPYAPGASGNVATEDVVYMLDGMGINTGVDLEMLLDTSLYISDKLGRPPQSRVARA 1200
            ++ P  V +VEVGPRDGLQNE + VPT VKVEL+DRL+AAG   +EAASFVSPKWVPQM D   VLA + R PGV+YAALTPNL+GLE AL A ADEVAVF AASE+FS  NINCSI ESL+RF PVME+A+  GLPVRGY+SCVLGCPYEG +AP AVAEVA  L  MGCY +SLGDTIG GT      ++ ++ E  VP++K+AVHFHDTYGQALANIL AL+ G+ V+D+SV+GLGGCPYA GASGNVA+EDV+YML+G+GI TGVDL+ L+    +ISD +GRP  S+VARA
Sbjct:    1 MQLPNVVRMVEVGPRDGLQNEKTMVPTAVKVELVDRLSAAGLGVVEAASFVSPKWVPQMGDSADVLAGITRKPGVRYAALTPNLKGLEGALAAKADEVAVFGAASESFSQKNINCSIAESLDRFAPVMERARAEGLPVRGYISCVLGCPYEGEIAPKAVAEVAERLFAMGCYEISLGDTIGTGTPAKAQAMITAVAER-VPMDKIAVHFHDTYGQALANILAALQMGVAVVDSSVAGLGGCPYAKGASGNVASEDVLYMLNGLGIETGVDLDRLIAAGAFISDAIGRPTASKVARA 295          
BLAST of mRNA_E-fasciculatus_F_contig1616.4203.1 vs. uniprot
Match: A0A4R6UJQ5_9GAMM (Hydroxymethylglutaryl-CoA lyase n=1 Tax=Permianibacter aggregans TaxID=1510150 RepID=A0A4R6UJQ5_9GAMM)

HSP 1 Score: 400 bits (1027), Expect = 3.270e-133
Identity = 202/298 (67.79%), Postives = 238/298 (79.87%), Query Frame = 1
Query:  322 PKSVSLVEVGPRDGLQNEPSTVPTEVKVELIDRLAAAGCKAIEAASFVSPKWVPQMADGGQVLADLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSIVESLERFKPVMEKAKGAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQALANILVALEEGITVLDTSVSGLGGCPYAPGASGNVATEDVVYMLDGMGINTGVDLEMLLDTSLYISDKLGRPPQSRVARAMLAKR 1215
            P+ V +V+VGPRDGLQNE + V TEVKVELI RLA AG   +EA SFVSPKWVPQMAD  +V+A + R  GV+Y  LTPNL+G EAAL AGADEVAVF AASE+FS  NINCSI ESLERF PVME AK   + VRGYVSCVLGCPYEG +A G VAEVA +LLDMGCY +SLGDTIG GT G    +LE++ +  VP+ ++AVHFHDTYGQALANI   L+ G+ V+D+S++GLGGCPYA GASGNVATEDVVYML+G+GI TG+D+E LLD S +IS +LGR P S+ A+AMLAKR
Sbjct:    4 PQKVKIVDVGPRDGLQNEKTIVSTEVKVELIQRLAEAGLPVVEATSFVSPKWVPQMADNVEVMAKIQRKSGVRYPVLTPNLKGFEAALAAGADEVAVFGAASESFSQKNINCSIKESLERFAPVMEAAKANNVRVRGYVSCVLGCPYEGEIAVGKVAEVAKTLLDMGCYEISLGDTIGVGTPGKARTMLETVAKQ-VPMTQLAVHFHDTYGQALANIFACLQAGVAVVDSSIAGLGGCPYAKGASGNVATEDVVYMLNGLGIETGIDIERLLDVSAFISAQLGREPVSKAAKAMLAKR 300          
BLAST of mRNA_E-fasciculatus_F_contig1616.4203.1 vs. uniprot
Match: A0A6A5L0Y2_LUPAL (Hydroxymethylglutaryl-CoA lyase, mitochondrial n=14 Tax=cellular organisms TaxID=131567 RepID=A0A6A5L0Y2_LUPAL)

HSP 1 Score: 399 bits (1026), Expect = 4.310e-133
Identity = 200/293 (68.26%), Postives = 238/293 (81.23%), Query Frame = 1
Query:  322 PKSVSLVEVGPRDGLQNEPSTVPTEVKVELIDRLAAAGCKAIEAASFVSPKWVPQMADGGQVLADLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSIVESLERFKPVMEKAKGAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQALANILVALEEGITVLDTSVSGLGGCPYAPGASGNVATEDVVYMLDGMGINTGVDLEMLLDTSLYISDKLGRPPQSRVARA 1200
            PK V +VEVGPRDGLQNE + VPT VKVEL++RL+ AG   +EAASFVSPKWVPQM D  +VLA + R PGV+YAALTPNL+GLE AL A ADEVAVF AASE+FS  NINCSI ESL+RF PVME+AK AG+PVRGYVSCVLGCPYEG +AP AVA+VA  L  MGCY +SLGDTIG GT      ++ ++ E  VP++K+AVHFHDTYGQALANIL AL+ G+ V+D+SV+GLGGCPYA GASGNVA+EDV+YML+G+GI TGVDL+ L+    +ISD +GRP  S+VARA
Sbjct:    4 PKFVRMVEVGPRDGLQNEKTMVPTAVKVELVNRLSDAGLSVVEAASFVSPKWVPQMGDSAEVLAGIARKPGVRYAALTPNLKGLEGALAAKADEVAVFGAASESFSQKNINCSIAESLDRFAPVMEQAKAAGVPVRGYVSCVLGCPYEGEIAPRAVADVAERLFAMGCYEISLGDTIGTGTPTKAQAMIAAVAER-VPVDKIAVHFHDTYGQALANILAALQMGVAVVDSSVAGLGGCPYAKGASGNVASEDVLYMLNGLGIETGVDLDRLIAAGAFISDAIGRPTASKVARA 295          
BLAST of mRNA_E-fasciculatus_F_contig1616.4203.1 vs. uniprot
Match: A0A154VJN6_9PROT (Hydroxymethylglutaryl-CoA lyase n=1 Tax=Oceanibaculum pacificum TaxID=580166 RepID=A0A154VJN6_9PROT)

HSP 1 Score: 399 bits (1025), Expect = 6.780e-133
Identity = 195/299 (65.22%), Postives = 239/299 (79.93%), Query Frame = 1
Query:  322 PKSVSLVEVGPRDGLQNEPSTVPTEVKVELIDRLAAAGCKAIEAASFVSPKWVPQMADGGQVLADLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSIVESLERFKPVMEKAKGAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQALANILVALEEGITVLDTSVSGLGGCPYAPGASGNVATEDVVYMLDGMGINTGVDLEMLLDTSLYISDKLGRPPQSRVARAMLAKRS 1218
            P  V +VEVGPRDGLQNE   +P  VKV LIDRL+AAG   +E+ SFVSPKWVPQMAD  QVLA + + PG  Y  L PNL+GLE AL AG +E+AVF AASE+FS  NINCSI ESLERF+PV E A+GAG+ VRGYVSCVLGCPYEG +AP AVA V+ +L  MGCY VSLGDTIG GT G    +L ++  + +P++++AVHFHDTYGQALANI  ALEEG++V+D+SV+GLGGCPYA GASGNVATEDVVYML+G+GI TG+D++ L++T+ +ISD LGRPP S+VARA+  K++
Sbjct:    4 PGRVKIVEVGPRDGLQNEAQVIPAAVKVALIDRLSAAGLPVVESGSFVSPKWVPQMADTAQVLAAISKRPGTAYPVLVPNLKGLEVALAAGVEEIAVFGAASESFSQRNINCSIAESLERFRPVAETARGAGIRVRGYVSCVLGCPYEGEIAPEAVAAVSQALFAMGCYEVSLGDTIGVGTPGKAKAMLRAVA-SDIPMDRLAVHFHDTYGQALANIYAALEEGVSVVDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGIETGIDIDALVETAFFISDALGRPPASKVARAIAGKKA 301          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1616.4203.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ51_ECTSI8.650e-21092.24Hydroxymethylglutaryl-CoA lyase n=2 Tax=Ectocarpus... [more]
UPI0016659C4E2.940e-13769.46hydroxymethylglutaryl-CoA lyase n=1 Tax=Tistrella ... [more]
A0A1Y5SIC2_9PROT5.420e-13567.33Hydroxymethylglutaryl-CoA lyase n=1 Tax=Oceanibact... [more]
UPI0004212E151.330e-13467.91hydroxymethylglutaryl-CoA lyase n=1 Tax=Azospirill... [more]
A0A162KV33_9PROT1.540e-13467.68Hydroxymethylglutaryl-CoA lyase n=3 Tax=Tistrella ... [more]
G7Z9X9_AZOL42.670e-13468.94Hydroxymethylglutaryl-CoA lyase n=12 Tax=Azospiril... [more]
A0A2U1VHB5_9PROT2.150e-13367.57Hydroxymethylglutaryl-CoA lyase n=1 Tax=Azospirill... [more]
A0A4R6UJQ5_9GAMM3.270e-13367.79Hydroxymethylglutaryl-CoA lyase n=1 Tax=Permianiba... [more]
A0A6A5L0Y2_LUPAL4.310e-13368.26Hydroxymethylglutaryl-CoA lyase, mitochondrial n=1... [more]
A0A154VJN6_9PROT6.780e-13365.22Hydroxymethylglutaryl-CoA lyase n=1 Tax=Oceanibacu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1616contigE-fasciculatus_F_contig1616:1753..5181 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score624.0
Seed ortholog evalue4e-176
Seed eggNOG ortholog2880.D8LQ51
KEGG rclassRC00502,RC00503,RC01118,RC01946
KEGG koko:K01640
KEGG ReactionR01360,R08090
KEGG Pathwayko00072,ko00280,ko00281,ko00650,ko01100,ko04146,map00072,map00280,map00281,map00650,map01100,map04146
KEGG ModuleM00036,M00088
EggNOG free text desc.hydroxymethylglutaryl-CoA lyase activity
EggNOG OGsCOG0119@1,KOG2368@2759
EC4.1.3.4
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionHydroxymethylglutaryl-CoA lyase
Ec32 orthologEc-26_006120.1
Exons5
Model size1773
Cds size1008
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928080.7502348-UTR-E-fasciculatus_F_contig1616:1752..19651622928080.7502348-UTR-E-fasciculatus_F_contig1616:1752..1965Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1616 1753..1965 +
1695995815.6267028-UTR-E-fasciculatus_F_contig1616:1752..19651695995815.6267028-UTR-E-fasciculatus_F_contig1616:1752..1965Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1616 1753..1965 +
1622928080.8867333-UTR-E-fasciculatus_F_contig1616:4629..51811622928080.8867333-UTR-E-fasciculatus_F_contig1616:4629..5181Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1616 4630..5181 +
1695995815.693793-UTR-E-fasciculatus_F_contig1616:4629..51811695995815.693793-UTR-E-fasciculatus_F_contig1616:4629..5181Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1616 4630..5181 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928080.786339-CDS-E-fasciculatus_F_contig1616:1965..21541622928080.786339-CDS-E-fasciculatus_F_contig1616:1965..2154Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1616 1966..2154 +
1695995815.642042-CDS-E-fasciculatus_F_contig1616:1965..21541695995815.642042-CDS-E-fasciculatus_F_contig1616:1965..2154Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1616 1966..2154 +
1622928080.8040414-CDS-E-fasciculatus_F_contig1616:2406..26071622928080.8040414-CDS-E-fasciculatus_F_contig1616:2406..2607Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1616 2407..2607 +
1695995815.6527684-CDS-E-fasciculatus_F_contig1616:2406..26071695995815.6527684-CDS-E-fasciculatus_F_contig1616:2406..2607Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1616 2407..2607 +
1622928080.8405104-CDS-E-fasciculatus_F_contig1616:3198..33901622928080.8405104-CDS-E-fasciculatus_F_contig1616:3198..3390Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1616 3199..3390 +
1695995815.6645396-CDS-E-fasciculatus_F_contig1616:3198..33901695995815.6645396-CDS-E-fasciculatus_F_contig1616:3198..3390Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1616 3199..3390 +
1622928080.8587177-CDS-E-fasciculatus_F_contig1616:3599..37941622928080.8587177-CDS-E-fasciculatus_F_contig1616:3599..3794Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1616 3600..3794 +
1695995815.6734734-CDS-E-fasciculatus_F_contig1616:3599..37941695995815.6734734-CDS-E-fasciculatus_F_contig1616:3599..3794Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1616 3600..3794 +
1622928080.8701315-CDS-E-fasciculatus_F_contig1616:4398..46291622928080.8701315-CDS-E-fasciculatus_F_contig1616:4398..4629Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1616 4399..4629 +
1695995815.683751-CDS-E-fasciculatus_F_contig1616:4398..46291695995815.683751-CDS-E-fasciculatus_F_contig1616:4398..4629Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1616 4399..4629 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1616.4203.1prot_E-fasciculatus_F_contig1616.4203.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1616 1966..4629 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1616.4203.1

>prot_E-fasciculatus_F_contig1616.4203.1 ID=prot_E-fasciculatus_F_contig1616.4203.1|Name=mRNA_E-fasciculatus_F_contig1616.4203.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=336bp
MIGSHRCRRAFASLSARRASVASPTHRGLRSGAIRWPKSVSLVEVGPRDG
LQNEPSTVPTEVKVELIDRLAAAGCKAIEAASFVSPKWVPQMADGGQVLA
DLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSI
VESLERFKPVMEKAKGAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLL
DMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQAL
ANILVALEEGITVLDTSVSGLGGCPYAPGASGNVATEDVVYMLDGMGINT
GVDLEMLLDTSLYISDKLGRPPQSRVARAMLAKRS*
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mRNA from alignment at E-fasciculatus_F_contig1616:1753..5181+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1616.4203.1 ID=mRNA_E-fasciculatus_F_contig1616.4203.1|Name=mRNA_E-fasciculatus_F_contig1616.4203.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3429bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1616:1753..5181+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGAGTGCACCGCTCACGGTGGTGATTTTGCTCTCCTGGGCTGGCTGGGGG CGAGGTGAGCCAGATCCCATTTTTTTAAGCGAGGGGGCGACGTAACTGCA ACATCCGTACGGGCGGACTCCTGTGGTGTTTGCGCTGTACATCTTGATCT TCACGAACACGAACCACGTCTTGTCCAAAAGGTCCCTATCGACCAAGTGC ACGGTGCCGTAGGATGATCGGTTCTCACCGCTGTCGGCGAGCTTTCGCGT CCCTCAGTGCAAGGCGCGCAAGCGTAGCGTCACCGACACATCGAGGCCTA AGAAGCGGCGCAATTAGGTGGCCCAAGTCCGTGTCCCTCGTGGAAGTGGG CCCCAGAGACGGACTGCAGAATGAGCCCTCCACTGTGCCAACTGAGGTCA AGGTGAGACAGTAGTGGCGGCAACAGCATGGTGTAGCCCCGACGCCTTTT CTTCATGCTCATGCCACAACATATATGTGGATACATGGGAACATCCCTCG TTGTCTGGTTTCTCACGTATACTGCTGCGTGTACAGAGTCTCCCCGCAAG TTGAAGTGAAACAGCAAGCATGCTCTAGCTGTGCGTCTTGTGCGAGTCTG TCGGCAACACGTCTGCCGTCCCTCTTGGCTGTTGCATGCACGCGCAACGC AAAGGTGGAATTGATTGATCGGTTGGCAGCGGCCGGGTGTAAAGCTATCG AAGCTGCATCTTTCGTCAGCCCCAAGTGGGTTCCGCAGATGGCTGACGGC GGCCAAGTGCTGGCCGATCTTGGAAGAGCGCCGGGCGTCAAATATGCGGC CCTGACGCCCAACCTACGGGGGCTTGAGGCAGCGCTCGAGGCTGGCGCTG ATGAGGTGCAGTTGGTCGGGGCCCGTGGTCTCTCTTTCGTGCCGTTGGTT CAACCTGGCAGCATAAGCCATGGGTGATATGATATCGGCAACTTGGTGCT GTGTAGCAAGTCACAGGGTGCTGTGTAGCAAGTTACATGGTGGACTTACG TAGTCTAGTCTAGCTACTGCCAGATGGAGCATCCACGATCGGTACGATGT CCAGATGACGTGCACCACAAGGCAGAGGGGCTGAAAGGGAGATAAACTGA CGGACTGTGACGGTAGCACTGATACAGCCCAGTGCACATGGTAGACCCTC CAAGGTGTATGTAGTCTACAGCAGCAGTCGTTCTCGCAATCGTGTTACAT AGCGCCCCTTCCCACATCAAGGACCCAGCACTTCCACCACCACCTGGTAG ACAGAATTTAACTAACCAGTAGTCCAGTAGTCCATCAGGCGCAAATCAAA ATTCCGGCAAACAGGCAAACCCTCCGGTCGTGCTCTCTCCCGATAGTCCT ACCTTGACTCACGGCTGCCCTCTGTATTCGAAAACGGTATGCATATGCAG ATGTACCTGGATATTATTGCACCTGTAATTGCTGTTCCTGCGACAGGTTG CGGTTTTCGCTGCGGCGTCAGAGGCATTCAGTGCTGCCAACATCAACTGC TCAATTGTGGAGAGCTTAGAACGCTTCAAGCCAGTCATGGAAAAGGCCAA GGGAGCGGGGTTGCCAGTACGGGGCTACGTGTCGTGCGTGCTCGGGTGCC CGTACGAGGGGCGAGTGGCTCCAGGAGCCGTTGCGGAGGTGAGTGCATGG GCGCACCTGCTGCGCCGAGTCCCTGGTACACGAGATCAGAAGGGCAAAGC AACCATTGACTGTACGCGGTAGGTTTGTTCACCAAGGCAGCCGTCTACAT GAGCGAAGTATTACAGTGGCAGCACGATCAAATCATCTCCAAGTGGTTCC CCGTCGTAGCGGCCGCTGATCTGGCGGCCTTACCTTCCGCGGAATAGGTG GCGACTTCCCTGTTGGACATGGGATGCTACTCGGTGTCACTGGGAGACAC CATCGGCGCGGGCACAGCTGGCAGTACCCTTGTCCTCCTAGAAAGCTTGA GAGAAGCGGGAGTGCCTCTGGAGAAAATGGCGGTGCACTTCCACGACACA TACGGGCAGGCCTTGGCTAACATCCTTGTTGCGCTGGAGGAGGTGAGGGG TCAAATGGGTGCGATACTTCCATGCCCACAACGCTGCTCTTGATACCGGT CGCCGCGCGTGTGACTGCCGCATAGGTGGGTCTAAAACAGTGTTCGGAAT CAAATCGTAACTTTTGTGAGGGGTCAGCGGTGTTGGCAAGCTGACGATCT AATAACAACTCGTACTGTAGTAGGTATCAACCACGCGGTACACGAAAGCA CACTCCCTACGTGTGGTAGTATGTTTGCGGTTCGACCTAAGTCCAAAACA TCAAACCCTTCTCAGATCAAGTAAGGAGATCGACAAGATTTCACACCCCG AACACAACAACTATAATAGCACACTCGGTGACAATGTTGCCAGGCGCCAG AATGTGATCACCGGGGTTGGTTGTGTCGTGTGCGGTACTTCGGAGCAAGG TTCTGAGATCTCAAAGGTTTCAGAAGAAATGACTAAATCAAGTTGTATAG GATACCTGGGAAATCTGAGTACCTTTCAGGACCCTAATCGCACTTCGCTA AGGATATATGCTGCTTTGAACCCCCGATTTCCCGCCACACTCGCCGACTG AAAGCCCCAAATTCCCCGCTGCTATTCATGCTTTGTTTTGCACCAGGGTA TTACCGTGTTGGACACGTCCGTTTCTGGCCTAGGGGGTTGCCCATACGCT CCCGGGGCAAGCGGCAACGTCGCAACAGAAGACGTGGTGTACATGCTGGA TGGGATGGGAATCAACACGGGCGTTGACCTAGAAATGTTGTTAGACACTT CTTTGTATATTTCAGATAAGTTGGGTAGGCCGCCCCAGTCCAGAGTAGCG AGAGCGATGTTGGCCAAGCGAAGTTGACTTTTGCGAGGGACAAAGAATGA GATTCGATGTTGTTGCCCTCATGTGTCTGTCCTTGATTATTTGTCCATAC CACACTTACTCGTTTTTCTTAGCCTCTGGTACATTCGAAGGAACGTTGAA CCTATTTAGTGTTCAGCTGCCCTTAGGTCGTCTCTTAACGAGTTGAACCG ATTTCTTCGTACCCCGGAAGCGTGTCATCTAGCGTTGAGGAAGCAGAACA CGCGCCTTCTTCATGTTCCTTCCCTTGACGAGGGTTCTTGACGACTTATA CTCATTGGCTCCCTCTCTCGTTCGGAACTTTCGAGTTTTTGTTTGAGCGT GCATGGTGTGTTCCTCATGACAACGCGTGATGTCGCTGCATGTGTTTGTA TTGCCACTAACATTGGTTTCTAGGAGTTACCACCTGATGATGGTGCCAAC GTTCGACGTTTTTCTTGATGCAGCATCGAATCTAGGTCTCCCGTCGAGAG TATACGTAGGGACAATCCCCATAGGACGCAGCGCGCCAAACAAACCGGTA ACGGTCGCACTTCCTTCTTGCTTCCGTGC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1616:1753..5181+

>mRNA_E-fasciculatus_F_contig1616.4203.1 ID=mRNA_E-fasciculatus_F_contig1616.4203.1|Name=mRNA_E-fasciculatus_F_contig1616.4203.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2016bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1616:1753..5181+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGATCGGTTCTCACCGCTGTCGGCGAGCTTTCGCGTCCCTCAGTGCAAG
GCGCGCAAGCGTAGCGTCACCGACACATCGAGGCCTAAGAAGCGGCGCAA
TTAGGTGGCCCAAGTCCGTGTCCCTCGTGGAAGTGGGCCCCAGAGACGGA
CTGCAGAATGAGCCCTCCACTGTGCCAACTGAGGTCAAGATGATCGGTTC
TCACCGCTGTCGGCGAGCTTTCGCGTCCCTCAGTGCAAGGCGCGCAAGCG
TAGCGTCACCGACACATCGAGGCCTAAGAAGCGGCGCAATTAGGTGGCCC
AAGTCCGTGTCCCTCGTGGAAGTGGGCCCCAGAGACGGACTGCAGAATGA
GCCCTCCACTGTGCCAACTGAGGTCAAGGTGGAATTGATTGATCGGTTGG
CAGCGGCCGGGTGTAAAGCTATCGAAGCTGCATCTTTCGTCAGCCCCAAG
TGGGTTCCGCAGATGGCTGACGGCGGCCAAGTGCTGGCCGATCTTGGAAG
AGCGCCGGGCGTCAAATATGCGGCCCTGACGCCCAACCTACGGGGGCTTG
AGGCAGCGCTCGAGGCTGGCGCTGATGAGGTGGAATTGATTGATCGGTTG
GCAGCGGCCGGGTGTAAAGCTATCGAAGCTGCATCTTTCGTCAGCCCCAA
GTGGGTTCCGCAGATGGCTGACGGCGGCCAAGTGCTGGCCGATCTTGGAA
GAGCGCCGGGCGTCAAATATGCGGCCCTGACGCCCAACCTACGGGGGCTT
GAGGCAGCGCTCGAGGCTGGCGCTGATGAGGTTGCGGTTTTCGCTGCGGC
GTCAGAGGCATTCAGTGCTGCCAACATCAACTGCTCAATTGTGGAGAGCT
TAGAACGCTTCAAGCCAGTCATGGAAAAGGCCAAGGGAGCGGGGTTGCCA
GTACGGGGCTACGTGTCGTGCGTGCTCGGGTGCCCGTACGAGGGGCGAGT
GGCTCCAGGAGCCGTTGCGGAGGTTGCGGTTTTCGCTGCGGCGTCAGAGG
CATTCAGTGCTGCCAACATCAACTGCTCAATTGTGGAGAGCTTAGAACGC
TTCAAGCCAGTCATGGAAAAGGCCAAGGGAGCGGGGTTGCCAGTACGGGG
CTACGTGTCGTGCGTGCTCGGGTGCCCGTACGAGGGGCGAGTGGCTCCAG
GAGCCGTTGCGGAGGTGGCGACTTCCCTGTTGGACATGGGATGCTACTCG
GTGTCACTGGGAGACACCATCGGCGCGGGCACAGCTGGCAGTACCCTTGT
CCTCCTAGAAAGCTTGAGAGAAGCGGGAGTGCCTCTGGAGAAAATGGCGG
TGCACTTCCACGACACATACGGGCAGGCCTTGGCTAACATCCTTGTTGCG
CTGGAGGAGGTGGCGACTTCCCTGTTGGACATGGGATGCTACTCGGTGTC
ACTGGGAGACACCATCGGCGCGGGCACAGCTGGCAGTACCCTTGTCCTCC
TAGAAAGCTTGAGAGAAGCGGGAGTGCCTCTGGAGAAAATGGCGGTGCAC
TTCCACGACACATACGGGCAGGCCTTGGCTAACATCCTTGTTGCGCTGGA
GGAGGGTATTACCGTGTTGGACACGTCCGTTTCTGGCCTAGGGGGTTGCC
CATACGCTCCCGGGGCAAGCGGCAACGTCGCAACAGAAGACGTGGTGTAC
ATGCTGGATGGGATGGGAATCAACACGGGCGTTGACCTAGAAATGTTGTT
AGACACTTCTTTGTATATTTCAGATAAGTTGGGTAGGCCGCCCCAGTCCA
GAGTAGCGAGAGCGATGTTGGCCAAGCGAAGTTGAGGTATTACCGTGTTG
GACACGTCCGTTTCTGGCCTAGGGGGTTGCCCATACGCTCCCGGGGCAAG
CGGCAACGTCGCAACAGAAGACGTGGTGTACATGCTGGATGGGATGGGAA
TCAACACGGGCGTTGACCTAGAAATGTTGTTAGACACTTCTTTGTATATT
TCAGATAAGTTGGGTAGGCCGCCCCAGTCCAGAGTAGCGAGAGCGATGTT
GGCCAAGCGAAGTTGA
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