mRNA_E-fasciculatus_F_contig1613.4190.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1613.4190.1 vs. uniprot
Match: D7G5D5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D5_ECTSI) HSP 1 Score: 273 bits (699), Expect = 3.920e-83 Identity = 144/218 (66.06%), Postives = 161/218 (73.85%), Query Frame = 2
Query: 2 VEMCDGDIPGIQVSDVCCSSSCGSCGGSGCTGRDGGAEACCGGGVRASGRDCSVTGEAPCVVSGPTPAPAP--------TPEVEMCDGDIPGIQVSDVCCSSSCGSCGGFGCTGRDGGAEACCGGGVRASGRECSVTGEAPCVVSG*APEPTPTPAPEDETCDGGIVGIQTADVCCALSCGSCGGTGCSQREGGSTSCCYDDIQANGDSCGSVDSAPC 631
VE CDG I GIQ SD+ CSSSCGSCGG+GCT RDGG+EACCGGGVRASGR CSVTGEAPC+ +GP P P T EV MCDG I GIQ SD+CCSSSCGSCGG GCT RDGG+EACCGGGVRASGR CSVTGEAPC+ + E CDGGIVGIQ +DVCC+LSCGSCGGTGC+ R+GGS +CC ++A+G C APC
Sbjct: 61 VETCDGGIVGIQQSDISCSSSCGSCGGTGCTSRDGGSEACCGGGVRASGRYCSVTGEAPCM-TGPAPTPEXXXXXXXXXTDEVSMCDGGIVGIQQSDICCSSSCGSCGGTGCTSRDGGSEACCGGGVRASGRYCSVTGEAPCMTN------------EVPMCDGGIVGIQQSDVCCSLSCGSCGGTGCTSRDGGSEACCGGGVRASGRDCSVTGEAPC 265
BLAST of mRNA_E-fasciculatus_F_contig1613.4190.1 vs. uniprot
Match: A0A6H5JTV1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV1_9PHAE) HSP 1 Score: 279 bits (714), Expect = 1.690e-80 Identity = 148/228 (64.91%), Postives = 168/228 (73.68%), Query Frame = 2
Query: 2 VEMCDGDIPGIQVSDVCCSSSCGSCGGSGCTGRDGGAEACCGGGVRASGRDCSVTGEAPCVVSGPTPAP--------APTPEVEMCDGDIPGIQVSDVCCSSSCGSCGGFGCTGRDGGAEACCGGGVRASGRECSVTGEAPCVVSG*APEPTPTPAP----------EDETCDGGIVGIQTADVCCALSCGSCGGTGCSQREGGSTSCCYDDIQANGDSCGSVDSAPC 631
V MCDGDI GIQ SDVCCS+SCGSCGGSGCT RDGG+E+CCGGGVRASGR CS+TGEAPC+ +GP P P T EV MCDGDI GIQ SDVCCS+SCG+CGG GCTGRDGG+E+CCGGGVRASGR CS+TGEAPC+ PTPA E CDGGIVGIQ +DVCC+LSCGSCGG+GC+ R+GGS SCC ++A+G C APC
Sbjct: 142 VPMCDGDIVGIQSSDVCCSASCGSCGGSGCTERDGGSESCCGGGVRASGRYCSITGEAPCM-TGPAPTPDXXXXXXXXXTVEVPMCDGDIVGIQSSDVCCSASCGTCGGSGCTGRDGGSESCCGGGVRASGRYCSITGEAPCMTGA-----APTPAXXXXXXXXXTVEVPKCDGGIVGIQASDVCCSLSCGSCGGSGCTGRDGGSESCCGGGVRASGRDCSVTGEAPC 363
BLAST of mRNA_E-fasciculatus_F_contig1613.4190.1 vs. uniprot
Match: D7G3T6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T6_ECTSI) HSP 1 Score: 275 bits (703), Expect = 3.160e-80 Identity = 144/218 (66.06%), Postives = 161/218 (73.85%), Query Frame = 2
Query: 2 VEMCDGDIPGIQVSDVCCSSSCGSCGGSGCTGRDGGAEACCGGGVRASGRDCSVTGEAPCVVSGPTPAPAP--------TPEVEMCDGDIPGIQVSDVCCSSSCGSCGGFGCTGRDGGAEACCGGGVRASGRECSVTGEAPCVVSG*APEPTPTPAPEDETCDGGIVGIQTADVCCALSCGSCGGTGCSQREGGSTSCCYDDIQANGDSCGSVDSAPC 631
V MCDG I GIQ SD+CCSSSCGSCGG+GCT RDGG+EACCGGGVRASGR CSVTGEAPC+ +GP P P T EV MCDG I GIQ SD+CCSS CGSCGG GCT RDGG+EACCGGGVRASGR CSVTGEAPC+ + E CDGGIVGIQ +DVCC+LSCGSCGGTGC+ R+GGS +CC ++A+G C APC
Sbjct: 22 VPMCDGGIVGIQQSDICCSSSCGSCGGTGCTSRDGGSEACCGGGVRASGRFCSVTGEAPCM-TGPAPTPXXXXXXXXXXTDEVPMCDGGIVGIQQSDICCSSRCGSCGGTGCTSRDGGSEACCGGGVRASGRYCSVTGEAPCMTN------------EVPMCDGGIVGIQQSDVCCSLSCGSCGGTGCTSRDGGSEACCGGGVRASGRDCSVTGEAPC 226
BLAST of mRNA_E-fasciculatus_F_contig1613.4190.1 vs. uniprot
Match: D7G4E0_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E0_ECTSI) HSP 1 Score: 276 bits (707), Expect = 3.390e-77 Identity = 146/226 (64.60%), Postives = 166/226 (73.45%), Query Frame = 2
Query: 2 VEMCDGDIPGIQVSDVCCSSSCGSCGGSGCTGRDGGAEACCGGGVRASGRDCSVTGEAPCVVSGPTPAPAP--------TPEVEMCDGDIPGIQVSDVCCSSSCGSCGGFGCTGRDGGAEACCGGGVRASGRECSVTGEAPCVVSG*APEPTPTPAP--------EDETCDGGIVGIQTADVCCALSCGSCGGTGCSQREGGSTSCCYDDIQANGDSCGSVDSAPC 631
+ MCDG I GIQ SDVCCS+SCGSCGGSGCTGRDGG+E+CCGGGVRASGR CS+TGEAPC+ +GP P P T EV MCDG I GIQ SDVCCS+SCGSCGG GCTGRDGG+E+CCGGGVRASGR CS+TGEAPC+ P PTP E CDGGIVGIQ++DVCC+ SCGSCGG+GCS R+GGS SCC ++ +G C APC
Sbjct: 155 IPMCDGGIVGIQTSDVCCSASCGSCGGSGCTGRDGGSESCCGGGVRASGRYCSITGEAPCM-TGPAPTPXXXXXXXXXXTVEVPMCDGGIVGIQSSDVCCSASCGSCGGSGCTGRDGGSESCCGGGVRASGRYCSITGEAPCMTG---PAPTPXXXXXXXXXXTVEVPMCDGGIVGIQSSDVCCSASCGSCGGSGCSGRDGGSESCCGGGVRGSGRYCSVTGEAPC 376
BLAST of mRNA_E-fasciculatus_F_contig1613.4190.1 vs. uniprot
Match: D7G3U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U7_ECTSI) HSP 1 Score: 267 bits (682), Expect = 1.140e-76 Identity = 140/213 (65.73%), Postives = 156/213 (73.24%), Query Frame = 2
Query: 2 VEMCDGDIPGIQVSDVCCSSSCGSCGGSGCTGRDGGAEACCGGGVRASGRDCSVTGEAPCVVSGPTPAPAPTPEVEMCDGDIPGIQVSDVCCSSSCGSCGGFGCTGRDGGAEACCGGGVRASGRECSVTGEAPCVVSG*APE-PTPTPAPEDE--TCDGGIVGIQTADVCCALSCGSCGGTGCSQREGGSTSCCYDDIQANGDSCGSVDSAPC 631
V MCDG I GIQ SDVCCS+SCGSCGG+GC+GRDGG+ ACCGGGVRASGR CSVTGEAPC+ V CDG I GIQ SDVCCS SC SCGG GC+GRDGG + CCGGGVRASGR+CSVTGEAPC+V+ P P PTPAP TCDGGIVG+Q +DVCCALSCGSCGG GCS R+GG +CC +I+ C APC
Sbjct: 267 VPMCDGGIVGIQTSDVCCSTSCGSCGGTGCSGRDGGSGACCGGGVRASGRYCSVTGEAPCMT------------VPKCDGGIVGIQASDVCCSLSCESCGGSGCSGRDGGEDECCGGGVRASGRDCSVTGEAPCIVTSPEPSTPAPTPAPTRAAGTCDGGIVGVQASDVCCALSCGSCGGDGCSDRDGGEDNCCGVEIRTANLDCSVTGEAPC 467
BLAST of mRNA_E-fasciculatus_F_contig1613.4190.1 vs. uniprot
Match: A0A6H5JVC9_9PHAE (AMOP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVC9_9PHAE) HSP 1 Score: 275 bits (704), Expect = 1.740e-76 Identity = 147/228 (64.47%), Postives = 165/228 (72.37%), Query Frame = 2
Query: 2 VEMCDGDIPGIQVSDVCCSSSCGSCGGSGCTGRDGGAEACCGGGVRASGRDCSVTGEAPCVVSGPTPAPAPTPE----------VEMCDGDIPGIQVSDVCCSSSCGSCGGFGCTGRDGGAEACCGGGVRASGRECSVTGEAPCVVSG*APEPTPTP--------APEDETCDGGIVGIQTADVCCALSCGSCGGTGCSQREGGSTSCCYDDIQANGDSCGSVDSAPC 631
V CDG I GIQ SDVCCS SCGSCGG+GCTGRDGGA+ACCGGGVR+SGR CSVTGEAPC+ +GP P P PT V MCDG I GIQ SDVCC+SSCGSCGG GCTGRDGG +ACCGGGVRASGR CSVTGEAPC+ P PTP E CDGGIVGIQ++DVCC+LSCGSCGGTGC+ R+GG+ +CC ++A+G C APC
Sbjct: 50 VPTCDGGIVGIQSSDVCCSLSCGSCGGTGCTGRDGGADACCGGGVRSSGRFCSVTGEAPCI-TGPAPTPEPTXXXXXXXXDEGAVPMCDGGIVGIQSSDVCCTSSCGSCGGSGCTGRDGGEDACCGGGVRASGRYCSVTGEAPCMTG---PAPTPXXXXXXXXXXTEEVPMCDGGIVGIQSSDVCCSLSCGSCGGTGCTVRDGGADACCGGGVRASGRDCSVTGEAPC 273
BLAST of mRNA_E-fasciculatus_F_contig1613.4190.1 vs. uniprot
Match: A0A6H5JWJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWJ0_9PHAE) HSP 1 Score: 264 bits (674), Expect = 2.440e-76 Identity = 141/226 (62.39%), Postives = 161/226 (71.24%), Query Frame = 2
Query: 2 VEMCDGDIPGIQVSDVCCSSSCGSCGGSGCTGRDGGAEACCGGGVRASGRDCSVTGEAPCVVSGPTPAPAP--------TPEVEMCDGDIPGIQVSDVCCSSSCGSCGGFGCTGRDGGAEACCGGGVRASGRECSVTGEAPCVVSG*APEPTPTPAP--------EDETCDGGIVGIQTADVCCALSCGSCGGTGCSQREGGSTSCCYDDIQANGDSCGSVDSAPC 631
V MCDG I GIQ +VCCS+SCGSCGG GC+GRDGG++ACCGGGV ASGR C+VTGEAPC+ +GP P P T E MCDG I GIQ SDVCCS+SCGSC G GC+GRDGG +ACCGGGVRASGR CSVTGEAPC+ P PTP E CDGGIVGIQ +DVCC+LSCGSCGG+GCS R+GGS +CC ++A+G C APC
Sbjct: 313 VPMCDGGIVGIQAKEVCCSASCGSCGGVGCSGRDGGSDACCGGGVTASGRLCAVTGEAPCI-TGPAPTPEXXXXXXXXXTVEAPMCDGGIIGIQTSDVCCSASCGSCXGSGCSGRDGGPDACCGGGVRASGRFCSVTGEAPCITG---PAPTPXXXXXXXXXXTIEVPECDGGIVGIQASDVCCSLSCGSCGGSGCSGRDGGSDACCGGGVRASGRFCSVTGEAPC 534
BLAST of mRNA_E-fasciculatus_F_contig1613.4190.1 vs. uniprot
Match: A0A6H5K3Y1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Y1_9PHAE) HSP 1 Score: 254 bits (649), Expect = 2.500e-74 Identity = 139/224 (62.05%), Postives = 160/224 (71.43%), Query Frame = 2
Query: 8 MCDGDIPGIQVSDVCCSSSCGSCGGSGCTGRDGGAEACCGGGVRASGRDCSVTGEAPCVVSGPTPAPAP--------TPEVEMCDGDIPGIQVSDVCCSSSCGSCGGFGCTGRDGGAEACCGGGVRASGRECSVTGEAPCVVSG*APEPTPTPAP------EDETCDGGIVGIQTADVCCALSCGSCGGTGCSQREGGSTSCCYDDIQANGDSCGSVDSAPCRL 637
MC+G I GIQ SDVCCS SCGSCGGSGC+GRDGG++ACCGGGVRASGR CS+T EAPC+ +GP P P T EV MCDG+I GIQ SDVCCS+SCGSCGG GC+GRDGG++ACCGGGVRASGR CSVTGEAPC+ G AP PT E CDGGIVGIQ +DVCC+ SCGS C+ R+GG +CC ++A+G C APC L
Sbjct: 179 MCEGGIAGIQASDVCCSVSCGSCGGSGCSGRDGGSDACCGGGVRASGRFCSITEEAPCM-TGPAPTPXXXXXXXXXXTVEVPMCDGEIVGIQASDVCCSASCGSCGGSGCSGRDGGSDACCGGGVRASGRFCSVTGEAPCMT-GPAPTTEPTXXXXXXXTVEVPMCDGGIVGIQASDVCCSASCGSXXXXXCTGRDGGPDACCGGGVRASGLLCSVTGEAPCLL 400
BLAST of mRNA_E-fasciculatus_F_contig1613.4190.1 vs. uniprot
Match: A0A6H5JVK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVK3_9PHAE) HSP 1 Score: 145 bits (366), Expect = 2.160e-37 Identity = 79/115 (68.70%), Postives = 86/115 (74.78%), Query Frame = 2
Query: 8 MCDGDIPGIQVSDVCCSSSCGSCGGSGCTGRDGGAEACCGGGVRASGRDCSVTGEAPCVVSGPTPAPAP--------TPEVEMCDGDIPGIQVSDVCCSSSCGSCGGFGCTGRDG 328
MCDG I GIQ SDVCCS+SCGSCGGSGC+GRDGG++ACCGGGVRASGR CSVTGEAPC+ +GP P P T EV MCDG I GIQ SDVCCS+SCGS GRDG
Sbjct: 1 MCDGGIVGIQASDVCCSASCGSCGGSGCSGRDGGSDACCGGGVRASGRFCSVTGEAPCM-TGPAPTPXXXXXXXXXXTVEVPMCDGGIVGIQASDVCCSASCGSXXXXXXXGRDG 114
BLAST of mRNA_E-fasciculatus_F_contig1613.4190.1 vs. uniprot
Match: A0A6H5JC43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC43_9PHAE) HSP 1 Score: 149 bits (377), Expect = 1.300e-35 Identity = 96/226 (42.48%), Postives = 124/226 (54.87%), Query Frame = 2
Query: 11 CDGDIPGIQVSDV-CCSSSCGSCGGSGCT------GRDGGAEACCGGGVRASGRDCSVTGEAPCVVSGPTPAPAPTPEVEMCDGDIPGIQVSDV-CCSSSCGSCGGFGCT------GRDGGAEACCGGGVRASGRECSVTGEAPCVVSG*APEPTPTPAPEDETCDGGIVGIQ-TADVCCALSCGSCGGTGCSQREG----GSTSCCYDDIQANGDSCGSVDSAPC 631
C + GI + V CC +CG CGG+GC G DG +CCGGGV+AS C T EAPC++ G P P+PT C + GI + V CC CG CGG GC G DG +CCGG ++ASG+ C T +APC++ G +P P+PTP+ ETC G+ GI VCC L CG CGG GC+ G+ SCC I+A+ + C + APC
Sbjct: 193 CSNGLEGIDANGVVCCPLACGQCGGTGCNTSGAAFGLDG--SSCCGGGVKASDEYCDETNEAPCII-GSRPTPSPT-SANTCSNGLEGIDGNGVVCCPLGCGQCGGTGCNTSGAAAGLDG--SSCCGGSIKASGKYCDETNDAPCII-GSSPAPSPTPS---ETCSNGVEGIDGNGVVCCPLGCGQCGGAGCTTSGAAAGLGADSCCGGSIKASDEYCDETNEAPC 408 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1613.4190.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1613.4190.1 >prot_E-fasciculatus_F_contig1613.4190.1 ID=prot_E-fasciculatus_F_contig1613.4190.1|Name=mRNA_E-fasciculatus_F_contig1613.4190.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=137bp MCDGDIPGIQVSDVCCSSSCGSCGGSGCTGRDGGAEACCGGGVRASGRDCback to top mRNA from alignment at E-fasciculatus_F_contig1613:9..4028+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1613.4190.1 ID=mRNA_E-fasciculatus_F_contig1613.4190.1|Name=mRNA_E-fasciculatus_F_contig1613.4190.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4020bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1613:9..4028+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1613:9..4028+ >mRNA_E-fasciculatus_F_contig1613.4190.1 ID=mRNA_E-fasciculatus_F_contig1613.4190.1|Name=mRNA_E-fasciculatus_F_contig1613.4190.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=822bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1613:9..4028+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |