mRNA_E-fasciculatus_F_contig16105.4176.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig16105.4176.1 vs. uniprot
Match: D8LGB2_ECTSI (Peroxisomal membrane protein-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB2_ECTSI) HSP 1 Score: 221 bits (563), Expect = 1.800e-71 Identity = 112/127 (88.19%), Postives = 113/127 (88.98%), Query Frame = 1
Query: 1 IQKTIWNPIFGVMFFTYLGLAEGKSVDDIQKKIKNDLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINTIQASYLGLCSSALRQIGYNIFLSFLGNKKADDDSVKSALVPADAGNIERFAEDAKED 381
I +TIWNPIFGVMFFTYLGLAEGKSVDDIQKKIKNDLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINTIQ IGYNIFLSFLGNKKADDDSVKSALVPADAGNIERFAEDAKED
Sbjct: 90 IDQTIWNPIFGVMFFTYLGLAEGKSVDDIQKKIKNDLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINTIQ-------------IGYNIFLSFLGNKKADDDSVKSALVPADAGNIERFAEDAKED 203
BLAST of mRNA_E-fasciculatus_F_contig16105.4176.1 vs. uniprot
Match: G3G651_9PHAE (Mpv17-like protein (Fragment) n=17 Tax=Fucaceae TaxID=3010 RepID=G3G651_9PHAE) HSP 1 Score: 164 bits (416), Expect = 1.960e-50 Identity = 87/119 (73.11%), Postives = 92/119 (77.31%), Query Frame = 1
Query: 25 IFGVMFFTYLGLAEGKSVDDIQKKIKNDLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINTIQASYLGLCSSALRQIGYNIFLSFLGNKKADDDSVKSALVPADAGNIERFAEDAKED 381
IFGVMFFTYLGL EGKS DDIQKKIKNDLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINTIQ IGYNIFLSFLGN+K ++ VK +L+P IER AED ED
Sbjct: 1 IFGVMFFTYLGLTEGKSFDDIQKKIKNDLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINTIQ-------------IGYNIFLSFLGNRKTEEPDVKLSLMPET--EIERLAEDIDED 104
BLAST of mRNA_E-fasciculatus_F_contig16105.4176.1 vs. uniprot
Match: A0A835Z5E2_9STRA (Peroxisomal membrane protein-related n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5E2_9STRA) HSP 1 Score: 160 bits (404), Expect = 1.540e-47 Identity = 78/105 (74.29%), Postives = 86/105 (81.90%), Query Frame = 1
Query: 1 IQKTIWNPIFGVMFFTYLGLAEGKSVDDIQKKIKNDLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINTIQASYLGLCSSALRQIGYNIFLSFLGNKKADDDSV 315
I +TIWNPIFG+MFF+YLGL EGKSVD I +KIK DLATAVMGSWTVWIPAHTINFKFVPTSQRLLYIN+IQ IGYN+FLSFLGNKKA +D+V
Sbjct: 90 IDQTIWNPIFGIMFFSYLGLTEGKSVDQIYQKIKADLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINSIQ-------------IGYNVFLSFLGNKKAPEDAV 181
BLAST of mRNA_E-fasciculatus_F_contig16105.4176.1 vs. uniprot
Match: W7TJ93_9STRA (Mpv17-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJ93_9STRA) HSP 1 Score: 150 bits (379), Expect = 1.070e-43 Identity = 75/109 (68.81%), Postives = 86/109 (78.90%), Query Frame = 1
Query: 1 IQKTIWNPIFGVMFFTYLGLAEGKSVDDIQKKIKNDLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINTIQASYLGLCSSALRQIGYNIFLSFLGNKKADD-DSVKSA 324
I + +WNP FGVMFF+YLGLAEGKS DIQ KIKNDLATAV+GSWTVWIPAH INF+FVP++QRLLYIN+IQ IGYNIFLSFLGNKK DD + +K+A
Sbjct: 93 IDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLATAVVGSWTVWIPAHFINFRFVPSNQRLLYINSIQ-------------IGYNIFLSFLGNKKVDDTEELKAA 188
BLAST of mRNA_E-fasciculatus_F_contig16105.4176.1 vs. uniprot
Match: Q0IHG9_XENLA (MGC154358 protein n=1 Tax=Xenopus laevis TaxID=8355 RepID=Q0IHG9_XENLA) HSP 1 Score: 149 bits (375), Expect = 5.810e-43 Identity = 73/120 (60.83%), Postives = 85/120 (70.83%), Query Frame = 1
Query: 1 IQKTIWNPIFGVMFFTYLGLAEGKSVDDIQKKIKNDLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINTIQASYLGLCSSALRQIGYNIFLSFLGNKKADDDSVKSALVPADAGNIERF 360
I + +WNP FGVMFF+YLGLAEGKS DIQ KIKNDL TAV+GSWTVWIPAH +NF+FVP+SQRLLYIN+IQ IGYNIFLSFLGNKK D+ V A +++
Sbjct: 93 IDQLLWNPCFGVMFFSYLGLAEGKSFADIQTKIKNDLTTAVVGSWTVWIPAHFVNFRFVPSSQRLLYINSIQ-------------IGYNIFLSFLGNKKVDEPEVVKEAEAAVTSAVDKM 199
BLAST of mRNA_E-fasciculatus_F_contig16105.4176.1 vs. uniprot
Match: A0A7S2RA66_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RA66_9STRA) HSP 1 Score: 146 bits (369), Expect = 3.510e-42 Identity = 71/102 (69.61%), Postives = 76/102 (74.51%), Query Frame = 1
Query: 1 IQKTIWNPIFGVMFFTYLGLAEGKSVDDIQKKIKNDLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINTIQASYLGLCSSALRQIGYNIFLSFLGNKKADD 306
I + WNP FG+MFFTYLGLAEGKS DI KKIK DL TAVMGSW VW+PAHTINF F+P SQRLLYIN+IQ IGYNIFLSFLGNKK DD
Sbjct: 99 IDQVFWNPCFGIMFFTYLGLAEGKSFADIMKKIKADLKTAVMGSWAVWVPAHTINFAFIPPSQRLLYINSIQ-------------IGYNIFLSFLGNKKVDD 187
BLAST of mRNA_E-fasciculatus_F_contig16105.4176.1 vs. uniprot
Match: A0A7S2V4A9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4A9_9STRA) HSP 1 Score: 145 bits (366), Expect = 8.390e-42 Identity = 72/106 (67.92%), Postives = 79/106 (74.53%), Query Frame = 1
Query: 1 IQKTIWNPIFGVMFFTYLGLAEGKSVDDIQKKIKNDLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINTIQASYLGLCSSALRQIGYNIFLSFLGNKKADDDSVK 318
I + WNPIFG +FFTYLGLAEGKS +I KIK+DL TAVMGSWTVW+PAH INFKFVP+SQRLLYINTIQ IGYNIFLSFLGNK AD+ K
Sbjct: 90 IDQLFWNPIFGTVFFTYLGLAEGKSGGEIVNKIKSDLKTAVMGSWTVWVPAHIINFKFVPSSQRLLYINTIQ-------------IGYNIFLSFLGNKSADEPEKK 182
BLAST of mRNA_E-fasciculatus_F_contig16105.4176.1 vs. uniprot
Match: A0A7S2LHQ9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LHQ9_9STRA) HSP 1 Score: 144 bits (362), Expect = 3.810e-41 Identity = 68/106 (64.15%), Postives = 79/106 (74.53%), Query Frame = 1
Query: 1 IQKTIWNPIFGVMFFTYLGLAEGKSVDDIQKKIKNDLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINTIQASYLGLCSSALRQIGYNIFLSFLGNKKADDDSVK 318
I +TIWNPIFG+MFF YL L EGKS DD +KKI++DL TAVMGSW VW+PAHTINF F+P SQRLLYIN+IQ IGYN+FLSFLGNKK D + +
Sbjct: 90 IDQTIWNPIFGLMFFGYLNLVEGKSFDDYKKKIQSDLKTAVMGSWAVWVPAHTINFAFIPPSQRLLYINSIQ-------------IGYNVFLSFLGNKKVDGEEAE 182
BLAST of mRNA_E-fasciculatus_F_contig16105.4176.1 vs. uniprot
Match: A0A7R9Z9F5_9STRA (Hypothetical protein n=3 Tax=Odontellaceae TaxID=2749909 RepID=A0A7R9Z9F5_9STRA) HSP 1 Score: 142 bits (358), Expect = 2.970e-40 Identity = 70/108 (64.81%), Postives = 77/108 (71.30%), Query Frame = 1
Query: 1 IQKTIWNPIFGVMFFTYLGLAEGKSVDDIQKKIKNDLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINTIQASYLGLCSSALRQIGYNIFLSFLGNKKADDDSVKSA 324
I +TIWNPIFG MFF YL L EGKS +D + KIK DL TAVMGSW VW+PAHTINF FVP SQRLLYINTIQ IGYN+FLSFLGNK+ D + K A
Sbjct: 117 IDQTIWNPIFGCMFFGYLNLMEGKSFEDYKNKIKADLKTAVMGSWAVWVPAHTINFAFVPPSQRLLYINTIQ-------------IGYNVFLSFLGNKEVDGEEKKEA 211
BLAST of mRNA_E-fasciculatus_F_contig16105.4176.1 vs. uniprot
Match: B7G8P1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G8P1_PHATC) HSP 1 Score: 140 bits (353), Expect = 8.050e-40 Identity = 68/106 (64.15%), Postives = 76/106 (71.70%), Query Frame = 1
Query: 1 IQKTIWNPIFGVMFFTYLGLAEGKSVDDIQKKIKNDLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINTIQASYLGLCSSALRQIGYNIFLSFLGNKKADDDSVK 318
I +TIWNPIFG MFF YL L EGKS+DD KIK DL TAVMGSW VW+PAHTINF FVP +QRLLYINTIQ IGYN+FLSFLGNK +++ K
Sbjct: 91 IDQTIWNPIFGCMFFGYLNLMEGKSLDDYTTKIKTDLKTAVMGSWAVWVPAHTINFAFVPPAQRLLYINTIQ-------------IGYNVFLSFLGNKSVEEEPKK 183 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16105.4176.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig16105.4176.1 >prot_E-fasciculatus_F_contig16105.4176.1 ID=prot_E-fasciculatus_F_contig16105.4176.1|Name=mRNA_E-fasciculatus_F_contig16105.4176.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=128bp IQKTIWNPIFGVMFFTYLGLAEGKSVDDIQKKIKNDLATAVMGSWTVWIPback to top mRNA from alignment at E-fasciculatus_F_contig16105:1639..2214+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig16105.4176.1 ID=mRNA_E-fasciculatus_F_contig16105.4176.1|Name=mRNA_E-fasciculatus_F_contig16105.4176.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=576bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16105:1639..2214+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16105:1639..2214+ >mRNA_E-fasciculatus_F_contig16105.4176.1 ID=mRNA_E-fasciculatus_F_contig16105.4176.1|Name=mRNA_E-fasciculatus_F_contig16105.4176.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=768bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16105:1639..2214+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |