mRNA_E-fasciculatus_F_contig1609.4168.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1609.4168.1 vs. uniprot
Match: D7FY69_ECTSI (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY69_ECTSI) HSP 1 Score: 202 bits (513), Expect = 2.870e-62 Identity = 104/116 (89.66%), Postives = 106/116 (91.38%), Query Frame = 1
Query: 1 GNGNAVLFKSKPEVFTFSIHCKANYFSEKEASTRHSDVDVEVEEGAGDEEYLRLLSERLPSLVDQVRPDLIFYQGGVDPLVHDRLGRLSLTREGLRLRNSLVYDTALARGIPTVVT 348
GNGNAVLFKSKPEV TFSIHCKANYFSEKE SDVD+EVEEGAGDEEYL LLSERLPSLVD VRPDLIFYQGGVDPL HDRLGRLSLTREGLRLRN LVYDTALARGIPTV+T
Sbjct: 191 GNGNAVLFKSKPEVSTFSIHCKANYFSEKE----DSDVDIEVEEGAGDEEYLSLLSERLPSLVDHVRPDLIFYQGGVDPLEHDRLGRLSLTREGLRLRNRLVYDTALARGIPTVLT 302
BLAST of mRNA_E-fasciculatus_F_contig1609.4168.1 vs. uniprot
Match: A0A6H5K9Q6_9PHAE (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Q6_9PHAE) HSP 1 Score: 139 bits (351), Expect = 2.530e-40 Identity = 74/93 (79.57%), Postives = 78/93 (83.87%), Query Frame = 1
Query: 97 TRHSDVDVEVEEGAGDEEYLRLLSERLPSLVDQVRPDLIFYQ---------GGVDPLVHDRLGRLSLTREGLRLRNSLVYDTALARGIPTVVT 348
T+ SDVD+EVEEGAGD EYL LLSE LPSLVDQVRPDLIFYQ GGVDPL HDRLGRLSLTR+GLRLRN LVYDTALARGIPTV+T
Sbjct: 4 TQDSDVDIEVEEGAGDAEYLSLLSEHLPSLVDQVRPDLIFYQIRSDAVVYQGGVDPLEHDRLGRLSLTRDGLRLRNRLVYDTALARGIPTVLT 96
BLAST of mRNA_E-fasciculatus_F_contig1609.4168.1 vs. uniprot
Match: A0A7S2E319_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E319_9STRA) HSP 1 Score: 140 bits (352), Expect = 7.680e-40 Identity = 70/116 (60.34%), Postives = 85/116 (73.28%), Query Frame = 1
Query: 1 GNGNAVLFKSKPEVFTFSIHCKANYFSEKEASTRHSDVDVEVEEGAGDEEYLRLLSERLPSLVDQVRPDLIFYQGGVDPLVHDRLGRLSLTREGLRLRNSLVYDTALARGIPTVVT 348
GNGNA +FK+ P+VFTFS+HC ANYFS+ E S +D+EV EGA D+ YL +L LP L+ +V P L+F+Q GVDPL DRLGRLSLTR GLR RN LVYDT L+ G+ VVT
Sbjct: 26 GNGNADIFKTDPDVFTFSVHCAANYFSKVETSN----LDLEVPEGADDDAYLTILQRWLPILMREVNPSLVFFQSGVDPLQSDRLGRLSLTRAGLRRRNQLVYDTCLSHGVSVVVT 137
BLAST of mRNA_E-fasciculatus_F_contig1609.4168.1 vs. uniprot
Match: A0A835Z933_9STRA (Hist_deacetyl domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z933_9STRA) HSP 1 Score: 135 bits (340), Expect = 2.670e-36 Identity = 69/116 (59.48%), Postives = 83/116 (71.55%), Query Frame = 1
Query: 1 GNGNAVLFKSKPEVFTFSIHCKANYFSEKEASTRHSDVDVEVEEGAGDEEYLRLLSERLPSLVDQVRPDLIFYQGGVDPLVHDRLGRLSLTREGLRLRNSLVYDTALARGIPTVVT 348
GNGNA LF V+TFS+HCKANYFS ++ +SD+DVEV+ AGD+ YL L+ + +P L+DQVRPDL+FYQ GVDPL DRLG L LTREGL RN +VY AL R VVT
Sbjct: 191 GNGNAALFAGNDAVYTFSMHCKANYFSARQ----YSDMDVEVDASAGDDAYLSLVEQWVPKLLDQVRPDLVFYQAGVDPLWCDRLGHLKLTREGLSRRNRIVYSAALQRCTRLVVT 302
BLAST of mRNA_E-fasciculatus_F_contig1609.4168.1 vs. uniprot
Match: A0A7S3MFR4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MFR4_9STRA) HSP 1 Score: 127 bits (320), Expect = 2.270e-35 Identity = 67/116 (57.76%), Postives = 82/116 (70.69%), Query Frame = 1
Query: 1 GNGNAVLFKSKPEVFTFSIHCKANYFSEKEASTRHSDVDVEVEEGAGDEEYLRLLSERLPSLVDQVRPDLIFYQGGVDPLVHDRLGRLSLTREGLRLRNSLVYDTALARGIPTVVT 348
GNGNAVLFK+ P VFTFS+HCK NYFS+KE HS++DVEVE G DEEYL L+ LP L ++V+P L+F+Q GVD DRLG+L +TR GL+ RN VY + R I VVT
Sbjct: 38 GNGNAVLFKNDPRVFTFSMHCKDNYFSKKE----HSNIDVEVEAGCQDEEYLAKLNLWLPILFEKVQPQLVFFQAGVDIYEGDRLGKLKITRTGLQQRNQAVYREIVKRKIKCVVT 149
BLAST of mRNA_E-fasciculatus_F_contig1609.4168.1 vs. uniprot
Match: A0A7S4FM83_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FM83_9EUGL) HSP 1 Score: 129 bits (325), Expect = 3.360e-35 Identity = 64/116 (55.17%), Postives = 84/116 (72.41%), Query Frame = 1
Query: 1 GNGNAVLFKSKPEVFTFSIHCKANYFSEKEASTRHSDVDVEVEEGAGDEEYLRLLSERLPSLVDQVRPDLIFYQGGVDPLVHDRLGRLSLTREGLRLRNSLVYDTALARGIPTVVT 348
GNGNAVLF+ VFTFS+HC+ANYFS+K+ S +DVE+ +G D+EY+R L LP L+DQ++P L++YQ GVD V DRLG++ ++REGLR RN VY+ AL R IP V T
Sbjct: 89 GNGNAVLFQEDERVFTFSMHCEANYFSKKQVSN----LDVELPKGCNDKEYMRHLRWHLPRLLDQLQPSLVYYQAGVDIFVGDRLGKMDISREGLRERNWYVYEEALTRDIPLVTT 200
BLAST of mRNA_E-fasciculatus_F_contig1609.4168.1 vs. uniprot
Match: A0A7S0H8Q2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0H8Q2_9EUKA) HSP 1 Score: 125 bits (313), Expect = 2.330e-34 Identity = 65/116 (56.03%), Postives = 79/116 (68.10%), Query Frame = 1
Query: 1 GNGNAVLFKSKPEVFTFSIHCKANYFSEKEASTRHSDVDVEVEEGAGDEEYLRLLSERLPSLVDQVRPDLIFYQGGVDPLVHDRLGRLSLTREGLRLRNSLVYDTALARGIPTVVT 348
GNG AVLF+ +P V TFS+HC N+FS+K+ SD+DVEV GAGD EYL LL E LP L ++V+PDL F+Q GVDP D LG+L L+ GL+ RN LVYD A A VVT
Sbjct: 32 GNGCAVLFQDEPRVTTFSLHCAGNFFSDKQ----RSDLDVEVPPGAGDAEYLALLQEHLPPLFERVKPDLTFFQAGVDPHEDDALGKLRLSSAGLKRRNKLVYDQAAAHATRLVVT 143
BLAST of mRNA_E-fasciculatus_F_contig1609.4168.1 vs. uniprot
Match: A0A7S1IVC4_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IVC4_9EUGL) HSP 1 Score: 128 bits (321), Expect = 1.510e-33 Identity = 62/116 (53.45%), Postives = 84/116 (72.41%), Query Frame = 1
Query: 1 GNGNAVLFKSKPEVFTFSIHCKANYFSEKEASTRHSDVDVEVEEGAGDEEYLRLLSERLPSLVDQVRPDLIFYQGGVDPLVHDRLGRLSLTREGLRLRNSLVYDTALARGIPTVVT 348
GNGNAVLFK++ VFTFS+HCK NYFS+K+ S D+D+E+ +G D+EYL +L L L D+V+PDL+F+Q GVD D+LG++ LTR GL RN VY+TA+ R +P V+T
Sbjct: 185 GNGNAVLFKNEDRVFTFSMHCKQNYFSQKQTS----DLDIELPKGCTDQEYLAVLQMHLARLFDRVQPDLVFFQAGVDVFYQDKLGKMLLTRGGLLRRNRHVYETAIFRQVPVVIT 296
BLAST of mRNA_E-fasciculatus_F_contig1609.4168.1 vs. uniprot
Match: A0A0G4EU19_VITBC (Hist_deacetyl domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EU19_VITBC) HSP 1 Score: 128 bits (322), Expect = 3.210e-33 Identity = 69/119 (57.98%), Postives = 83/119 (69.75%), Query Frame = 1
Query: 1 GNGNAVLFKSKPEVFTFSIHCKANYFSEKEASTRHSDVDVEVEEGAGDEEYLRLLSERLPSLVDQVRPDLIFYQGGVDPLVHDRLGRLSLTREGLRLRNSLVYDTALA---RGIPTVVT 348
GNGNAVLF+ + VFT S+HC ANYFS KEAS VD+EV EG GD YL LL++ LP +V + RPDLIFYQ GVD L DR G+LSL+R GL+ RN LVY+ A+ +P VVT
Sbjct: 240 GNGNAVLFQDQSNVFTLSVHCTANYFSPKEASH----VDIEVPEGTGDGAYLSLLAKTLPDIVREFRPDLIFYQSGVDCLKTDRFGKLSLSRGGLQTRNRLVYEMAMTDKHTPVPVVVT 354
BLAST of mRNA_E-fasciculatus_F_contig1609.4168.1 vs. uniprot
Match: A0A8J5XGD3_DIALT (Hist_deacetyl domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XGD3_DIALT) HSP 1 Score: 124 bits (310), Expect = 4.320e-32 Identity = 64/116 (55.17%), Postives = 76/116 (65.52%), Query Frame = 1
Query: 1 GNGNAVLFKSKPEVFTFSIHCKANYFSEKEASTRHSDVDVEVEEGAGDEEYLRLLSERLPSLVDQVRPDLIFYQGGVDPLVHDRLGRLSLTREGLRLRNSLVYDTALARGIPTVVT 348
GNGNAVLFK + VFTFS+HC NYFS EAS D+D+EV GAGD EY L LP L + P L+F+QGGVDPL +DR G+L L+R GLR RN V+ G+P VVT
Sbjct: 167 GNGNAVLFKDEHRVFTFSMHCAGNYFSPVEAS----DLDIEVPIGAGDAEYCGKLEAVLPPLFHALAPQLVFFQGGVDPLANDRYGKLQLSRAGLRRRNEAVFGLCAQHGVPLVVT 278 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1609.4168.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1609.4168.1 >prot_E-fasciculatus_F_contig1609.4168.1 ID=prot_E-fasciculatus_F_contig1609.4168.1|Name=mRNA_E-fasciculatus_F_contig1609.4168.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=69bp MGTPCCSSRNLRFSRSASTARPTTSPRRRRARVIPTWMLRWRKVPGTRSIback to top mRNA from alignment at E-fasciculatus_F_contig1609:15066..16049- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1609.4168.1 ID=mRNA_E-fasciculatus_F_contig1609.4168.1|Name=mRNA_E-fasciculatus_F_contig1609.4168.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=984bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1609:15066..16049- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1609:15066..16049- >mRNA_E-fasciculatus_F_contig1609.4168.1 ID=mRNA_E-fasciculatus_F_contig1609.4168.1|Name=mRNA_E-fasciculatus_F_contig1609.4168.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=414bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1609:15066..16049- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |