mRNA_E-fasciculatus_F_contig16088.4165.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig16088.4165.1 vs. uniprot
Match: D7G152_ECTSI (Mcl1_mid domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G152_ECTSI) HSP 1 Score: 384 bits (985), Expect = 5.530e-124 Identity = 213/242 (88.02%), Postives = 222/242 (91.74%), Query Frame = 1
Query: 1 SQSFGWQWAPLLDTLKVSKNKRNRFWPVGVVSGKLLAATLKGGEEHPAAYPRPVITAVPLTALCAQSQDGEEMSKFEKSFPAMEARARQRKFNLDHGLVMGDDVSAEPEAEMEGELMAQQAALDTMVVKRIQEACAAEKSERAMDLSSLLHLEKSYSIAIKVANHHGLTSLAAGMDDAMVAKFQGPENEDAFDEDEGFEAGEGGLARGXXXXXXXXXXXXXM---DEEQNLGPLDRARLEQA 717
++SFGWQW PLLDTLKVSK+KR RFWPVGVVSGKLLAATLK GEEHPAAYPRPVITAVPLTA+CAQSQDGEEMSKF+KSFPAMEARA+QRKFNLDHGLVMGDDVSAEPE EMEGELM Q A LDTMVVKRIQEACAAEK ERAMDLSSLLHLEKSYSIAIKVANHHGLTSLAAGMDDAMVAKFQGP++EDAFD DEG EAG+GG AR XXXXXXXXX DEEQNLGPLDRARLEQA
Sbjct: 563 TRSFGWQWTPLLDTLKVSKSKRYRFWPVGVVSGKLLAATLKDGEEHPAAYPRPVITAVPLTAICAQSQDGEEMSKFDKSFPAMEARAKQRKFNLDHGLVMGDDVSAEPE-EMEGELMTQLAKLDTMVVKRIQEACAAEKPERAMDLSSLLHLEKSYSIAIKVANHHGLTSLAAGMDDAMVAKFQGPDDEDAFDGDEGSEAGDGGWARSGRSGXXXXXXXXXXXXXDEEQNLGPLDRARLEQA 803
BLAST of mRNA_E-fasciculatus_F_contig16088.4165.1 vs. uniprot
Match: A0A6H5KWI2_9PHAE (Mcl1_mid domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWI2_9PHAE) HSP 1 Score: 325 bits (834), Expect = 2.180e-107 Identity = 168/182 (92.31%), Postives = 174/182 (95.60%), Query Frame = 1
Query: 1 SQSFGWQWAPLLDTLKVSKNKRNRFWPVGVVSGKLLAATLKGGEEHPAAYPRPVITAVPLTALCAQSQDGEEMSKFEKSFPAMEARARQRKFNLDHGLVMGDDVSAEPEAEMEGELMAQQAALDTMVVKRIQEACAAEKSERAMDLSSLLHLEKSYSIAIKVANHHGLTSLAAGMDDAMVAK 546
++SFGWQW PLLDTLKVSK+KR RFWPVGVVSGKLLAATLK GEEHPAAYPRPVITAVPLTA+CAQSQDGEEMSKFEK+FP+MEARARQRKFNLDHGLVMGDDVSAEPE EMEGELM Q A LDTMVVKRIQEACAAEK ERAMDLSSLLHLEKSYSIAIKVANHHGLTSLAAGMDDAMVAK
Sbjct: 82 TRSFGWQWTPLLDTLKVSKSKRYRFWPVGVVSGKLLAATLKDGEEHPAAYPRPVITAVPLTAICAQSQDGEEMSKFEKTFPSMEARARQRKFNLDHGLVMGDDVSAEPE-EMEGELMTQLAKLDTMVVKRIQEACAAEKPERAMDLSSLLHLEKSYSIAIKVANHHGLTSLAAGMDDAMVAK 262
BLAST of mRNA_E-fasciculatus_F_contig16088.4165.1 vs. uniprot
Match: A0A836CJ04_9STRA (Mcl1_mid domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ04_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 1.800e-19 Identity = 67/194 (34.54%), Postives = 95/194 (48.97%), Query Frame = 1
Query: 46 KVSKNKRNRFWPVGVVSGKLLAATLKGGEEHPAAYPRPVITAVPLTALCAQSQDGEEMSKFEKSF--------PAMEARARQRKFNL----------DHGLVMGDDVSAEPEAEMEGELMAQQAALDTMVVKRIQEACAAEKSERAMDLSSLLHLEKSYSIAIKVANHHGLTSLAAGMDDAMVAKFQGPENEDA 573
+ + + +R WPV V L A LKG E+ PA +PRPV+T V L + +G ++FE S A EAR RK D G + D E + + A +D V+K +QEA + RA+DL++ L+LEKS++IAI++ANHHGL+ LAA +D M F DA
Sbjct: 822 ETAASTHSRMWPVSVAGAHLTAVALKGSEKFPATFPRPVVTQVALAVPPVRGPEGAAAARFEASLMLAKATRRAAAEARLALRKAMRAAGVRAERWDDGGELQDFDEVXXXXXXXXXEHLLELADIDKGVLKALQEAITQQNQGRALDLAARLNLEKSHTIAIRLANHHGLSQLAASIDACMQRLFNDDGGNDA 1015
BLAST of mRNA_E-fasciculatus_F_contig16088.4165.1 vs. uniprot
Match: A0A139A7A8_GONPJ (WD40 repeat-like protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139A7A8_GONPJ) HSP 1 Score: 86.3 bits (212), Expect = 1.180e-15 Identity = 60/175 (34.29%), Postives = 95/175 (54.29%), Query Frame = 1
Query: 22 WAPLLDTLKVSKNKRNRFWPVGVVSGKLLAATLKGGEEHPAAYPRPVITAVPLTALCAQSQDGEEMSKFEKSFPAMEARARQRKFNLDHGLVMGDDVSAEPEAEMEGELMAQQAALDTMVVKRIQEACAAEKSERAMDLSSLLHLEKSYSIAIKVANHHGLTSLAAGMDDAMVAK 546
WAPL DT + + K+ +WP+GV KL+ KGG++ P YP +I+ + L A ++ E S AME + + K L H + + SA+ E +L+ ++ D + ++ IQ AC AEK++RA+DLS+ L+L +S A+K+A HH L LA ++ AK
Sbjct: 651 WAPLCDTRILRQGKQEWYWPIGVTDSKLMFVITKGGQKSPQ-YPNRLISELDLKAPF--------LALDESSLGAMEEKLYRLKIILTH---LENQASAD-----ERDLLRRKIESDKVALQLIQNACKAEKAQRALDLSTHLYLSQSLDGAVKLAVHHHLPGLAERINIVKEAK 808
BLAST of mRNA_E-fasciculatus_F_contig16088.4165.1 vs. uniprot
Match: A0A7S0UJP5_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UJP5_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 2.360e-15 Identity = 66/193 (34.20%), Postives = 105/193 (54.40%), Query Frame = 1
Query: 7 SFGWQWAPLLDTLKVSKNKRNRFWPVGVVSGKLLAATLKGGEEHPAAYPRPVITAVPLTALCAQSQDGEEMSKFEKSFPAMEARARQRKFNLDHGLVMGDDVSAEPEAEMEGELMAQQAALDTMVVKRIQEACAAEKSERAMDLSSLLHLEKSYSIAIKVANHHGLTSLAAGMDDAMVAKFQGPENEDAFDED 585
++ W+WAP+LDT+ + K+ + WPV V +GKL+ LKGG +P A RPV T + L A+S + + E S + A + Q+KF + D +E ++E E +A A +D + ++ + K E A DL S LH EKSY IAI++A+ H LA ++ V K++ P+++D +ED
Sbjct: 184 TYIWEWAPVLDTIGLRKSSDDYHWPVTVHNGKLVCIPLKGGNTYPDANRRPVTTTLGLKMPLAKSVVSKNSALEELSVRSNIALS-QKKFLREL------DCDSE---DLEAEYVALCAQVDKVTLRLYSGMVDSGKLESAFDLVSRLHSEKSYEIAIRLADRH--YKLADEVE--RVKKYKFPDDDDVSNED 362
BLAST of mRNA_E-fasciculatus_F_contig16088.4165.1 vs. uniprot
Match: A0A8H7UD51_9FUNG (Uncharacterized protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7UD51_9FUNG) HSP 1 Score: 80.9 bits (198), Expect = 8.120e-14 Identity = 55/186 (29.57%), Postives = 91/186 (48.92%), Query Frame = 1
Query: 22 WAPLLDTLKVSKNKR--NRFWPVGVVSGKLLAATLKGGEEHPAAYPRPVITAVPLTALCAQSQDGEEMSKFEKSFPAMEARARQRKFNLDHGLVMGDDVSA-EPEAEMEGELMAQQAALDTMVVKRIQEACAAEKSERAMDLSSLLHLEKSYSIAIKVANHHGLTSLAAGMDDAMVAKFQGPENED 570
W P+ D KV++ + +WPVG++ +++ LKG A+PRPVI+ + L E +K E+S+ + + D+ +A E E L +D +++ IQ AC AEKS+RA+D++ LHL +S A+K+A+HH + +LA + KF N+D
Sbjct: 654 WVPVFDGSKVAQERGLDEHYWPVGLLRDQIMCLVLKGKTNQYPAFPRPVISNIILQMPFLHMDT--ETTKLEESYVRTNIMSTHER----------DEATATSQEDEFHRILSNADIEMDKTLLRLIQFACKAEKSQRAIDIAKSLHLSRSLDAAVKIASHHRMPALAERFNQIKETKFMSSINDD 827
BLAST of mRNA_E-fasciculatus_F_contig16088.4165.1 vs. uniprot
Match: A0A7S2XSN8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XSN8_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 1.400e-13 Identity = 63/204 (30.88%), Postives = 98/204 (48.04%), Query Frame = 1
Query: 1 SQSFGWQWAPLLDTLKVSKNKRNRFWPVGVVSGKLLAATLKGGEEHPAAYPRPVITAVPLTALCAQSQDGEEMSKFEKSFPAMEARARQRKFNLDHGLVMGDDVSAEPEAEMEGELMAQQAALDTMVVKRIQEACAAEKSERAMDLSSLLHLEKSYSIAIKVANHHGLTSLAAGMDDAMVAKFQGPENEDAFDEDEGFEAGEGG 612
S ++W P+LDTL + K+ + FWP+ V+ GKL+ LKGG EHP A RPV T + A+ + E S A A +++ FN ++ D + + E + +Q +D + +K K ERA+DL S LHLEKS+ +AI +++ L+ ++ +F P ED D+ E G G
Sbjct: 112 STGNSFEWLPMLDTLGLKKSDDDVFWPITVLDGKLVCVPLKGGNEHPDATRRPVTTTLSFRMPLARGTATKSSMLEEVSVRANIALNQKKFFN---DIISADHENPDDLLEEYDSVCSQ---VDKVTLKLFIGYLEGGKVERALDLVSRLHLEKSFDVAITLSDRMSQGKLSDRIEIVKECRFTLP-LEDEMDDGSFIEDGADG 308
BLAST of mRNA_E-fasciculatus_F_contig16088.4165.1 vs. uniprot
Match: F4NTR3_BATDJ (Mcl1_mid domain-containing protein n=1 Tax=Batrachochytrium dendrobatidis (strain JAM81 / FGSC 10211) TaxID=684364 RepID=F4NTR3_BATDJ) HSP 1 Score: 77.8 bits (190), Expect = 9.520e-13 Identity = 56/179 (31.28%), Postives = 88/179 (49.16%), Query Frame = 1
Query: 22 WAPLLDTLKVSKNKRNRFWPVGVVSGKLLAATLKGGEEHPAAYPRPVITAVPLTALCAQSQDGEEMSKFEKSFPAMEARARQRKFNLDHGLV---MGDDVSAEPEAEMEGELMAQQAALDTMVVKRIQEACAAEKSERAMDLSSLLHLEKSYSIAIKVANHHGLTSLAAGMDDAMVAKF 549
W PLLDT V K++ +W +GVV + + K + +P+P+I +PL Q F + ME Q+K L H + M D ++ ++ + + ALD V+K I AC AE+S+RA+DL S+LH KS A K+A H L +LA+ ++ A++
Sbjct: 679 WVPLLDTDVVRGTKQDHYWALGVVGSQFMCIICKNDKTPQ--FPKPIINELPLQVPFCQ---------FNLTSTQMEESFFQQKLFLRHKIAENSMNMDEFSDNDSHDTDMFLHENLALDKTVLKLIHGACTAERSQRALDLCSMLHSTKSLEGATKLAIHLHLPNLASRINSIKEARY 846
BLAST of mRNA_E-fasciculatus_F_contig16088.4165.1 vs. uniprot
Match: A0A2G5B252_COERN (Mcl1_mid domain-containing protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5B252_COERN) HSP 1 Score: 75.5 bits (184), Expect = 5.710e-12 Identity = 56/189 (29.63%), Postives = 95/189 (50.26%), Query Frame = 1
Query: 22 WAPLLDTLKVSKN--KRNRFWPVGVVSGKLLAATLKGGEEHPAAYPRPVITA--VPLTALCAQSQDGEEMSKF--EKSFPAMEARARQRKFNLDHGLVMGDDVSAEPEAEMEGELMAQQAALDTMVVKRIQEACAAEKSERAMDLSSLLHLEKSYSIAIKVANHHGLTSLAAGMDDAMVAKFQGPENED 570
W P+LDT ++S+ K FWPV + + + + T +G P +PRP++ V + L + +Q G++ +KF + F + +R G GD A E E D ++++ IQ AC A+KS+RA+DL+ ++ LE+S+ A+K+A + T+LA + +F G E D
Sbjct: 652 WMPVLDTRRLSRERGKHENFWPVALSARQFIVVTCRGKSRFPP-FPRPILDELDVEMPLLHSDTQVGQQEAKFLAVRVFCEQQQGEAERTGKEYPG---GDTAHARDELEQ-----------DKLLLRLIQLACKADKSQRAVDLALMIRLERSFDAALKIAIYQKQTALAERLVRIKEHRFAGDEYSD 825
BLAST of mRNA_E-fasciculatus_F_contig16088.4165.1 vs. uniprot
Match: A0A7S2XVD2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XVD2_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 1.630e-6 Identity = 53/179 (29.61%), Postives = 82/179 (45.81%), Query Frame = 1
Query: 76 WPVGVVSGKLLAATLKGGEEHPAAYPRPVITAVPLTALCAQSQDGEEMSKFEKSFPAMEARARQRKFNLDHGLVMGDDVSAEPEAEMEGELMAQQAALDTMVVKRIQEACAAEKSERAMDLSSLLHLEKSYSIAIKVANHHGLTSLAAGMDDAMVAKFQGPENEDAFDEDEGFEAGEGG 612
W + V+ GKL+ LKGG EHP A RPV T + A+ + E S A A +++ FN ++ D + + E + +Q +D + +K K ERA+DL S LHLEKS+ +AI +++ L+ ++ +F P ED D+ E G G
Sbjct: 3 WTITVLDGKLVCVPLKGGNEHPDATRRPVTTTLSFRMPLARGTATKSSMLEEVSVRANIALNQKKFFN---DIISADHENPDDLLEEYDSVCSQ---VDKVTLKLFIGYLEGGKVERALDLVSRLHLEKSFDVAITLSDRMSQGKLSDRIEIVKECRFTLP-LEDEMDDGSFIEDGADG 174 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16088.4165.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig16088.4165.1 >prot_E-fasciculatus_F_contig16088.4165.1 ID=prot_E-fasciculatus_F_contig16088.4165.1|Name=mRNA_E-fasciculatus_F_contig16088.4165.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=240bp SQSFGWQWAPLLDTLKVSKNKRNRFWPVGVVSGKLLAATLKGGEEHPAAYback to top mRNA from alignment at E-fasciculatus_F_contig16088:15..2563+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig16088.4165.1 ID=mRNA_E-fasciculatus_F_contig16088.4165.1|Name=mRNA_E-fasciculatus_F_contig16088.4165.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2549bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16088:15..2563+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16088:15..2563+ >mRNA_E-fasciculatus_F_contig16088.4165.1 ID=mRNA_E-fasciculatus_F_contig16088.4165.1|Name=mRNA_E-fasciculatus_F_contig16088.4165.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1440bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16088:15..2563+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |