mRNA_E-fasciculatus_F_contig16087.4164.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig16087.4164.1
Unique NamemRNA_E-fasciculatus_F_contig16087.4164.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig16087.4164.1 vs. uniprot
Match: D7FMQ9_ECTSI (Aquarius intron-binding protein similar to aquarius n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMQ9_ECTSI)

HSP 1 Score: 506 bits (1303), Expect = 1.180e-161
Identity = 290/321 (90.34%), Postives = 295/321 (91.90%), Query Frame = 1
Query:    1 LCHRDIDERHLLRLGAGERELREDTMKDFSKFGRVNYTLKRRLELLAEVQRLAETIGVEGDVGYTGETAEYFQLFHVTSRIERFEAELEQRKPTTP-SATASPXXXXXXXXXXXXXXXXXXXXXXXXXXGAKGVVKELFPFHGFFANAPAGDKLFGGEDDGEDLEVARGCFRHISKMFEELADYRAFELLRSHSARSDYLLTKQARIIAMTCTHAALIRRRLVELGFKYDNMVMEESAQILEVETFIPMMLQASCCYCLSSLLDLDPVLGCRLKRVTLIGDHHQLPPVVKSMAFQKYSKLDQSLFTRFVRLGTPTVQVSCR 960
            +  +DIDERHLLRLGAGERELREDTMKDFSKFGRVNYTLKRRLELLAEVQRLAETIGVEGDVGYTGETAEYFQLFHVTSRIERFEAELEQRKPT P SATASP XXXXXXXXXXXXXXXXXXX       A GVVKELFPFHGFFANAPAGDKLFGG DDGEDLEVARGCFRHISKMFEELADYRAFELLRSHSARSDYLLTKQARIIAMTCTHAALIRRRLVELGFKYDNMVMEESAQILEVETFIPMMLQ           DLDPVLGCRLKRVTLIGDHHQLPPVVKSMAFQKYSKLDQSLFTRFVRLGTPTVQ++ +
Sbjct: 1516 IMEKDIDERHLLRLGAGERELREDTMKDFSKFGRVNYTLKRRLELLAEVQRLAETIGVEGDVGYTGETAEYFQLFHVTSRIERFEAELEQRKPTAPPSATASPEXXXXXXXXXXXXXXXXXXX-------AAGVVKELFPFHGFFANAPAGDKLFGGVDDGEDLEVARGCFRHISKMFEELADYRAFELLRSHSARSDYLLTKQARIIAMTCTHAALIRRRLVELGFKYDNMVMEESAQILEVETFIPMMLQ-----------DLDPVLGCRLKRVTLIGDHHQLPPVVKSMAFQKYSKLDQSLFTRFVRLGTPTVQLNAQ 1818          
BLAST of mRNA_E-fasciculatus_F_contig16087.4164.1 vs. uniprot
Match: A0A7S2C5H4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C5H4_9STRA)

HSP 1 Score: 318 bits (814), Expect = 9.000e-101
Identity = 180/323 (55.73%), Postives = 224/323 (69.35%), Query Frame = 1
Query:    1 LCHRDIDERHLLRLGAGERELREDTM-KDFSKFGRVNYTLKRRLELLAEVQRLAETIGVEGDVGYTGETAEYFQLFHVTSRIERFEAELEQRKPTTPSATASPXXXXXXXXXXXXXXXXXXXXXXXXXXGAKGVVKELFPFHGFFANAPAGDKLFG---GEDDG--EDLEVARGCFRHISKMFEELADYRAFELLRSHSARSDYLLTKQARIIAMTCTHAALIRRRLVELGFKYDNMVMEESAQILEVETFIPMMLQASCCYCLSSLLDLDPVLGCRLKRVTLIGDHHQLPPVVKSMAFQKYSKLDQSLFTRFVRLGTPTVQV 951
            +  RD+ ERH+LRLGAG  +L E T  +DFSKFGRVN+TL RR ELL +VQRLA ++G++GD  YT E AE+F L+H+TSR+E+FEAE+ + +    +   +                                +  LFPF  FF++AP  D +F    GE +   + L+VARGCFRHI K+FEEL D+RAFELLR+H  RS+YLL KQ+RI+AMTCTHAA+ RR LV+LGF+YDN+VMEE+AQILEVET IPM+LQ           +LDPV GCRLKRV LIGDHHQLPPVVK+MAFQKYSKLDQ+LFTRFVRLG P V +
Sbjct:   60 IMERDVLERHMLRLGAGVEKLAEHTGGRDFSKFGRVNFTLARREELLDQVQRLASSLGIQGDA-YTCEAAEFFDLYHITSRVEKFEAEVAKLQAADNAEELTALK-----------------------------IVSLFPFANFFSDAPH-DAMFEPTLGESNDVIKALDVARGCFRHIHKVFEELKDFRAFELLRNHRMRSNYLLLKQSRIVAMTCTHAAITRRNLVDLGFRYDNLVMEEAAQILEVETVIPMLLQ-----------NLDPVEGCRLKRVCLIGDHHQLPPVVKNMAFQKYSKLDQTLFTRFVRLGVPHVML 340          
BLAST of mRNA_E-fasciculatus_F_contig16087.4164.1 vs. uniprot
Match: A0A835YIG8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIG8_9STRA)

HSP 1 Score: 310 bits (795), Expect = 1.100e-96
Identity = 183/338 (54.14%), Postives = 220/338 (65.09%), Query Frame = 1
Query:    1 LCHRDIDERHLLRLGAGERELREDTMKDFSKFGRVNYTLKRRLELLAEVQRLAETI-------GVEGDVGYTG---------ETAEYFQLFHVTSRIERFEAELEQRKPTTPSATASPXXXXXXXXXXXXXXXXXXXXXXXXXXGAKGVVKELFPFHGFFANAPAGDKLFGGEDDGEDLEVARGCFRHISKMFEELADYRAFELLRSHSARSDYLLTKQARIIAMTCTHAALIRRRLVELGFKYDNMVMEESAQILEVETFIPMMLQASCCYCLSSLLDLDPVLG--CRLKRVTLIGDHHQLPPVVKSMAFQKYSKLDQSLFTRFVRLGTPTVQVSCR 960
            +  RDIDERHLLRLGAGE+EL   T KDFSK GRVNYTL RRL+LL EV RLA T+       G EG  G  G         ETA +FQL+HVTSRIE FEAE+  +    P+                                    V  LFPF  FF++AP    LF  +D  +DL +ARGCFRH++++FEELA+YRAFELLR+ SAR+DYLLTKQAR++AMTCTHAAL+RRRLV+L FKYD++VMEE+ QILEVET IPM+LQ           D D V G   RLKRV LIGDHHQLPPVV+  A Q+++ LDQSLF RF+RLGTP+VQ+  +
Sbjct:  213 IMERDIDERHLLRLGAGEKELA--TSKDFSKAGRVNYTLSRRLKLLEEVSRLASTLTLSLATEGAEGAGGPAGLAEAAGHSCETAAHFQLYHVTSRIEAFEAEIAAQPQPLPADA----------------------------------VARLFPFAKFFSDAPV-QPLFEQKDGAKDLSIARGCFRHLARVFEELAEYRAFELLRTQSARADYLLTKQARVVAMTCTHAALLRRRLVQLAFKYDSLVMEEAGQILEVETLIPMLLQ-----------DQDMVEGGDSRLKRVVLIGDHHQLPPVVQCQALQQHAHLDQSLFARFIRLGTPSVQLDAQ 502          
BLAST of mRNA_E-fasciculatus_F_contig16087.4164.1 vs. uniprot
Match: W7TJX7_9STRA (Intron-binding protein aquarius n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJX7_9STRA)

HSP 1 Score: 311 bits (797), Expect = 7.400e-94
Identity = 183/332 (55.12%), Postives = 218/332 (65.66%), Query Frame = 1
Query:   10 RDIDERHLLRLGAGERELR-----EDTMKDFSKFGRVNYTLKRRLELLAEVQRLAETIGV-EGDVG--------YTGETAEYFQLFHVTSRIERFEAELEQRKPTTPSATASPXXXXXXXXXXXXXXXXXXXXXXXXXXGAK--GVVKELFPFHGFFANAPAGDKLFGGEDDG--EDLEVARGCFRHISKMFEELADYRAFELLRSHSARSDYLLTKQARIIAMTCTHAALIRRRLVELGFKYDNMVMEESAQILEVETFIPMMLQASCCYCLSSLLDLDPVLGCRLKRVTLIGDHHQLPPVVKSMAFQKYSKLDQSLFTRFVRLGTPTVQV 951
            R ID RH+LRLGAGE+EL      ++   DF+K+GRVNYTL RRLELL EV RLA ++G+ EG+ G        +T ETAEYF+L+ V SRIE FEA +++                                      G K  GVV   FPF  FF+ AP    LF    D   +DLEVARGCFRH+ ++FEELADYRAFELLR H  R DYLLTKQARI+AMTCTHAAL R RLVELGFK+D +VMEE+AQILEVETFIPM+LQ           ++DP+ GCRLKRV LIGDHHQLPP+V++ A QKY++LDQSLF RFVRLG  TVQ+
Sbjct:  602 RAIDPRHMLRLGAGEKELNVEGRGQEGGYDFTKWGRVNYTLARRLELLGEVTRLARSLGLQEGEGGSGGGTEGNFTCETAEYFRLYQVQSRIEAFEAAIKE--------------------------------------GGKDGGVVAAAFPFTAFFSTAP--QPLFRSTTDSWADDLEVARGCFRHLDRLFEELADYRAFELLRHHGMRGDYLLTKQARIVAMTCTHAALTRGRLVELGFKFDGLVMEEAAQILEVETFIPMLLQ-----------EVDPIEGCRLKRVVLIGDHHQLPPIVQNQALQKYARLDQSLFARFVRLGVKTVQL 882          
BLAST of mRNA_E-fasciculatus_F_contig16087.4164.1 vs. uniprot
Match: A0A7L4M1F4_GLAPT (AQR helicase (Fragment) n=5 Tax=Neognathae TaxID=8825 RepID=A0A7L4M1F4_GLAPT)

HSP 1 Score: 301 bits (771), Expect = 2.140e-93
Identity = 171/317 (53.94%), Postives = 209/317 (65.93%), Query Frame = 1
Query:   13 DIDERHLLRLGAGERELREDTMKDFSKFGRVNYTLKRRLELLAEVQRLAETIGVEGDVGYTGETAEYFQLFHVTSRIERFEAELEQRKPTTPSATASPXXXXXXXXXXXXXXXXXXXXXXXXXXGAKGVVKELFPFHGFFANAPAGDKLFGGEDDGEDLEVARGCFRHISKMFEELADYRAFELLRSHSARSDYLLTKQARIIAMTCTHAALIRRRLVELGFKYDNMVMEESAQILEVETFIPMMLQASCCYCLSSLLDLDPVLG-CRLKRVTLIGDHHQLPPVVKSMAFQKYSKLDQSLFTRFVRLGTPTVQVSCR 960
            DIDERHLLRLG GE EL  +T KDFS++GRVNY L RRLELL EV RL E++GV GDV YT ETA +F L+ V SR E + ++++ +   TP  T                                  V  LFPFH +FANAP    +F G    ED+E+A GCFRH+ K+F +L ++RAFELLRS   RS YLL K+A+IIAMTCTHAAL R  LVELGFKYDN++MEESAQILE+ETFIP++LQ             +P  G  RLKR  +IGDHHQLPPV+K+MAFQKYS ++QSLFTRFVR+G PTV +  +
Sbjct:  207 DIDERHLLRLGHGEEEL--ETEKDFSRYGRVNYVLARRLELLREVGRLQESLGVPGDVSYTCETAGHFFLYQVMSRWEEYISKVKAKGGKTPDVTD---------------------------------VSSLFPFHQYFANAP--QPIFKGRSYEEDMEIAEGCFRHVKKIFTQLEEFRAFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVELGFKYDNILMEESAQILEIETFIPLLLQ-------------NPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQ 473          
BLAST of mRNA_E-fasciculatus_F_contig16087.4164.1 vs. uniprot
Match: A0A0Q3MP80_AMAAE (Uncharacterized protein n=5 Tax=Neognathae TaxID=8825 RepID=A0A0Q3MP80_AMAAE)

HSP 1 Score: 298 bits (763), Expect = 4.470e-93
Identity = 169/317 (53.31%), Postives = 208/317 (65.62%), Query Frame = 1
Query:   13 DIDERHLLRLGAGERELREDTMKDFSKFGRVNYTLKRRLELLAEVQRLAETIGVEGDVGYTGETAEYFQLFHVTSRIERFEAELEQRKPTTPSATASPXXXXXXXXXXXXXXXXXXXXXXXXXXGAKGVVKELFPFHGFFANAPAGDKLFGGEDDGEDLEVARGCFRHISKMFEELADYRAFELLRSHSARSDYLLTKQARIIAMTCTHAALIRRRLVELGFKYDNMVMEESAQILEVETFIPMMLQASCCYCLSSLLDLDPVLG-CRLKRVTLIGDHHQLPPVVKSMAFQKYSKLDQSLFTRFVRLGTPTVQVSCR 960
            DIDERHLLRLG GE EL  +T KDFS++GRVNY L RRLELL EV RL E++GV GDV YT ETA +F L+ V SR E + ++++ +    P  T                                  V   FPFH +FANAP    +F G+   ED+E+A GCFRH+ K+F +L ++RAFELLRS   RS YLL K+A+IIAMTCTHAAL R  LVELGFKYDN++MEESAQILE+ETFIP++LQ             +P  G  RLKR  +IGDHHQLPPV+K+MAFQKYS ++QSLFTRFVR+G PTV +  +
Sbjct:   53 DIDERHLLRLGHGEEEL--ETEKDFSRYGRVNYVLARRLELLREVGRLQESLGVPGDVSYTCETAGHFFLYQVMSRWEEYISKVKAKGGKVPDVTD---------------------------------VSSFFPFHQYFANAP--QPVFKGKSYEEDMEIAEGCFRHVKKIFTQLEEFRAFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVELGFKYDNILMEESAQILEIETFIPLLLQ-------------NPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRIGVPTVDLDAQ 319          
BLAST of mRNA_E-fasciculatus_F_contig16087.4164.1 vs. uniprot
Match: A0A8B9FQP9_9PSIT (Uncharacterized protein n=2 Tax=Amazona collaria TaxID=241587 RepID=A0A8B9FQP9_9PSIT)

HSP 1 Score: 298 bits (763), Expect = 6.870e-92
Identity = 169/317 (53.31%), Postives = 208/317 (65.62%), Query Frame = 1
Query:   13 DIDERHLLRLGAGERELREDTMKDFSKFGRVNYTLKRRLELLAEVQRLAETIGVEGDVGYTGETAEYFQLFHVTSRIERFEAELEQRKPTTPSATASPXXXXXXXXXXXXXXXXXXXXXXXXXXGAKGVVKELFPFHGFFANAPAGDKLFGGEDDGEDLEVARGCFRHISKMFEELADYRAFELLRSHSARSDYLLTKQARIIAMTCTHAALIRRRLVELGFKYDNMVMEESAQILEVETFIPMMLQASCCYCLSSLLDLDPVLG-CRLKRVTLIGDHHQLPPVVKSMAFQKYSKLDQSLFTRFVRLGTPTVQVSCR 960
            DIDERHLLRLG GE EL  +T KDFS++GRVNY L RRLELL EV RL E++GV GDV YT ETA +F L+ V SR E + ++++ +    P  T                                  V   FPFH +FANAP    +F G+   ED+E+A GCFRH+ K+F +L ++RAFELLRS   RS YLL K+A+IIAMTCTHAAL R  LVELGFKYDN++MEESAQILE+ETFIP++LQ             +P  G  RLKR  +IGDHHQLPPV+K+MAFQKYS ++QSLFTRFVR+G PTV +  +
Sbjct:  261 DIDERHLLRLGHGEEEL--ETEKDFSRYGRVNYVLARRLELLREVGRLQESLGVPGDVSYTCETAGHFFLYQVMSRWEEYISKVKAKGGKVPDVTD---------------------------------VSSFFPFHQYFANAP--QPVFKGKSYEEDMEIAEGCFRHVKKIFTQLEEFRAFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVELGFKYDNILMEESAQILEIETFIPLLLQ-------------NPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRIGVPTVDLDAQ 527          
BLAST of mRNA_E-fasciculatus_F_contig16087.4164.1 vs. uniprot
Match: A0A4D9CVZ4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVZ4_9STRA)

HSP 1 Score: 308 bits (790), Expect = 1.060e-91
Identity = 182/332 (54.82%), Postives = 217/332 (65.36%), Query Frame = 1
Query:   10 RDIDERHLLRLGAGERELR-----EDTMKDFSKFGRVNYTLKRRLELLAEVQRLAETIGV-EGDVG--------YTGETAEYFQLFHVTSRIERFEAELEQRKPTTPSATASPXXXXXXXXXXXXXXXXXXXXXXXXXXGAK--GVVKELFPFHGFFANAPAGDKLFGGEDDG--EDLEVARGCFRHISKMFEELADYRAFELLRSHSARSDYLLTKQARIIAMTCTHAALIRRRLVELGFKYDNMVMEESAQILEVETFIPMMLQASCCYCLSSLLDLDPVLGCRLKRVTLIGDHHQLPPVVKSMAFQKYSKLDQSLFTRFVRLGTPTVQV 951
            R ID RH+LRLGAGE+EL      ++   DF+K+GRVNYTL RRLELL EV RLA ++GV EG+ G        +T ETAEYF+L+ V SRIE FEA +++                                      G K  GVV   FPF  FF+ AP    LF        +DLEVARGCFRH+ ++FEELADYRAFELLR H  R DYLLTKQARI+AMTCTHAAL R RLVELGFK+D +VMEE+AQILEVETFIPM+LQ           ++DP+ GCRLKRV LIGDHHQLPP++++ A QKY++LDQSLF RFVRLG  TVQ+
Sbjct: 1201 RAIDPRHMLRLGAGEKELNVEGRGQEGGYDFTKWGRVNYTLARRLELLGEVTRLARSLGVQEGEGGSGGGTEGNFTCETAEYFRLYQVQSRIEAFEAAIKE--------------------------------------GGKDGGVVTTAFPFTAFFSTAP--QPLFRSTTVSWADDLEVARGCFRHLDRLFEELADYRAFELLRHHGMRGDYLLTKQARIVAMTCTHAALTRGRLVELGFKFDGLVMEEAAQILEVETFIPMLLQ-----------EVDPIEGCRLKRVVLIGDHHQLPPIIQNQALQKYARLDQSLFARFVRLGVKTVQL 1481          
BLAST of mRNA_E-fasciculatus_F_contig16087.4164.1 vs. uniprot
Match: A0A2D4GTI6_MICCO (Uncharacterized protein (Fragment) n=2 Tax=Lepidosauria TaxID=8504 RepID=A0A2D4GTI6_MICCO)

HSP 1 Score: 293 bits (750), Expect = 1.880e-91
Identity = 167/317 (52.68%), Postives = 208/317 (65.62%), Query Frame = 1
Query:   13 DIDERHLLRLGAGERELREDTMKDFSKFGRVNYTLKRRLELLAEVQRLAETIGVEGDVGYTGETAEYFQLFHVTSRIERFEAELEQRKPTTPSATASPXXXXXXXXXXXXXXXXXXXXXXXXXXGAKGVVKELFPFHGFFANAPAGDKLFGGEDDGEDLEVARGCFRHISKMFEELADYRAFELLRSHSARSDYLLTKQARIIAMTCTHAALIRRRLVELGFKYDNMVMEESAQILEVETFIPMMLQASCCYCLSSLLDLDPVLG-CRLKRVTLIGDHHQLPPVVKSMAFQKYSKLDQSLFTRFVRLGTPTVQVSCR 960
            D+DERHLLRLG GE EL  +T KDFS++GRVNY L RRLELL EV RL E++GV GDV YT ETA +F L+ V SR E + ++++  K + PS  A                                 +   FPFH +F NAP    +F G    ED+E+A GCFRHI K+F +L ++RAFELLRS   RS YLL K+A+IIAMTCTHAAL R  LVELGFKYDN++MEE+AQILE+ETFIP++LQ             +P  G  RLKR  +IGDHHQLPPV+K+MAFQKYS ++QSLFTRFVR+G PT+ +  +
Sbjct:  158 DVDERHLLRLGHGEEEL--ETEKDFSRYGRVNYVLSRRLELLREVGRLQESLGVPGDVSYTCETAGHFFLYQVMSRWEEYMSKVKV-KGSKPSEVAD--------------------------------ICNFFPFHQYFTNAP--QPIFKGRSYTEDMEIAEGCFRHIKKIFTQLEEFRAFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVELGFKYDNILMEEAAQILEIETFIPLLLQ-------------NPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTIDLDAQ 424          
BLAST of mRNA_E-fasciculatus_F_contig16087.4164.1 vs. uniprot
Match: A0A093FKH4_GAVST (Intron-binding protein aquarius (Fragment) n=1 Tax=Gavia stellata TaxID=37040 RepID=A0A093FKH4_GAVST)

HSP 1 Score: 297 bits (761), Expect = 3.490e-91
Identity = 169/317 (53.31%), Postives = 208/317 (65.62%), Query Frame = 1
Query:   13 DIDERHLLRLGAGERELREDTMKDFSKFGRVNYTLKRRLELLAEVQRLAETIGVEGDVGYTGETAEYFQLFHVTSRIERFEAELEQRKPTTPSATASPXXXXXXXXXXXXXXXXXXXXXXXXXXGAKGVVKELFPFHGFFANAPAGDKLFGGEDDGEDLEVARGCFRHISKMFEELADYRAFELLRSHSARSDYLLTKQARIIAMTCTHAALIRRRLVELGFKYDNMVMEESAQILEVETFIPMMLQASCCYCLSSLLDLDPVLG-CRLKRVTLIGDHHQLPPVVKSMAFQKYSKLDQSLFTRFVRLGTPTVQVSCR 960
            DIDERHLLRLG GE EL  +T KDFS++GRVNY L RRLELL EV RL E++GV GDV YT ETA +F L+ V SR E + ++++ +    P  T                                  V   FPFH +FANAP    +F G+   ED+E+A GCFRH+ K+F +L ++RAFELLRS   RS YLL K+A+IIAMTCTHAAL R  LVELGFKYDN++MEESAQILE+ETFIP++LQ             +P  G  RLKR  +IGDHHQLPPV+K+MAFQKYS ++QSLFTRFVR+G PTV +  +
Sbjct:  262 DIDERHLLRLGHGEEEL--ETEKDFSRYGRVNYVLARRLELLREVGRLQESLGVPGDVSYTCETAGHFFLYQVMSRWEEYISKVKVKGGKLPDVTD---------------------------------VSSFFPFHQYFANAP--QPIFKGKSYEEDMEIAEGCFRHVKKIFTQLEEFRAFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVELGFKYDNILMEESAQILEIETFIPLLLQ-------------NPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQ 528          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16087.4164.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMQ9_ECTSI1.180e-16190.34Aquarius intron-binding protein similar to aquariu... [more]
A0A7S2C5H4_9STRA9.000e-10155.73Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A835YIG8_9STRA1.100e-9654.14P-loop containing nucleoside triphosphate hydrolas... [more]
W7TJX7_9STRA7.400e-9455.12Intron-binding protein aquarius n=1 Tax=Nannochlor... [more]
A0A7L4M1F4_GLAPT2.140e-9353.94AQR helicase (Fragment) n=5 Tax=Neognathae TaxID=8... [more]
A0A0Q3MP80_AMAAE4.470e-9353.31Uncharacterized protein n=5 Tax=Neognathae TaxID=8... [more]
A0A8B9FQP9_9PSIT6.870e-9253.31Uncharacterized protein n=2 Tax=Amazona collaria T... [more]
A0A4D9CVZ4_9STRA1.060e-9154.82Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A2D4GTI6_MICCO1.880e-9152.68Uncharacterized protein (Fragment) n=2 Tax=Lepidos... [more]
A0A093FKH4_GAVST3.490e-9153.31Intron-binding protein aquarius (Fragment) n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig16087contigE-fasciculatus_F_contig16087:251..2398 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score513.1
Seed ortholog evalue9.6e-143
Seed eggNOG ortholog2880.D7FMQ9
KEGG koko:K12874
KEGG Pathwayko03040,map03040
KEGG ModuleM00355
GOsGO:0000375,GO:0000377,GO:0000398,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005684,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0032991,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045292,GO:0046483,GO:0071014,GO:0071704,GO:0090304,GO:1901360,GO:1990904
EggNOG free text desc.mRNA splicing, via spliceosome
EggNOG OGsKOG1806@1,KOG1806@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Hectar predicted targeting categoryother localisation
Exons4
Model size960
Cds size960
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig16087.4164.1prot_E-fasciculatus_F_contig16087.4164.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig16087 251..2398 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928075.6100671-CDS-E-fasciculatus_F_contig16087:250..4301622928075.6100671-CDS-E-fasciculatus_F_contig16087:250..430Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16087 251..430 +
1695995813.1374023-CDS-E-fasciculatus_F_contig16087:250..4301695995813.1374023-CDS-E-fasciculatus_F_contig16087:250..430Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16087 251..430 +
1622928075.6226888-CDS-E-fasciculatus_F_contig16087:803..11481622928075.6226888-CDS-E-fasciculatus_F_contig16087:803..1148Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16087 804..1148 +
1695995813.1481194-CDS-E-fasciculatus_F_contig16087:803..11481695995813.1481194-CDS-E-fasciculatus_F_contig16087:803..1148Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16087 804..1148 +
1622928075.636193-CDS-E-fasciculatus_F_contig16087:1643..19041622928075.636193-CDS-E-fasciculatus_F_contig16087:1643..1904Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16087 1644..1904 +
1695995813.1568754-CDS-E-fasciculatus_F_contig16087:1643..19041695995813.1568754-CDS-E-fasciculatus_F_contig16087:1643..1904Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16087 1644..1904 +
1622928075.6502628-CDS-E-fasciculatus_F_contig16087:2224..23981622928075.6502628-CDS-E-fasciculatus_F_contig16087:2224..2398Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16087 2225..2398 +
1695995813.1665874-CDS-E-fasciculatus_F_contig16087:2224..23981695995813.1665874-CDS-E-fasciculatus_F_contig16087:2224..2398Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16087 2225..2398 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig16087.4164.1

>prot_E-fasciculatus_F_contig16087.4164.1 ID=prot_E-fasciculatus_F_contig16087.4164.1|Name=mRNA_E-fasciculatus_F_contig16087.4164.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=320bp
LCHRDIDERHLLRLGAGERELREDTMKDFSKFGRVNYTLKRRLELLAEVQ
RLAETIGVEGDVGYTGETAEYFQLFHVTSRIERFEAELEQRKPTTPSATA
SPKKKSSESNGKEAGGGDGAAGAAAAAAGAKGVVKELFPFHGFFANAPAG
DKLFGGEDDGEDLEVARGCFRHISKMFEELADYRAFELLRSHSARSDYLL
TKQARIIAMTCTHAALIRRRLVELGFKYDNMVMEESAQILEVETFIPMML
QASCCYCLSSLLDLDPVLGCRLKRVTLIGDHHQLPPVVKSMAFQKYSKLD
QSLFTRFVRLGTPTVQVSCR
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mRNA from alignment at E-fasciculatus_F_contig16087:251..2398+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig16087.4164.1 ID=mRNA_E-fasciculatus_F_contig16087.4164.1|Name=mRNA_E-fasciculatus_F_contig16087.4164.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2148bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16087:251..2398+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TTGTGTCACAGGGACATCGACGAGAGGCATCTGCTGCGGCTGGGAGCGGG CGAGCGCGAGCTGCGCGAGGACACGATGAAAGACTTTTCCAAGTTCGGAC GTGTCAACTACACCCTCAAGCGCAGGCTCGAGCTCCTTGCAGAGGTCCAG AGGTTGGCGGAGACCATCGGGGTCGAGGGGGTGAGAGCGGCAAGGACATG CATAAAATTTTGAGCGTGTGGAGCTCAAGCAGGAACTTTTTGTTGTTGTT GTTTTGTGTGTTTTTAAGCCCGGAGATACAGCATGTTCGTGCGTGTAGCT TTTATTTTATTTTATTTACTTACGTTTTTGTACGCTTGTTGTCCAGTAGC GAAGGACATCATTAAAAAAACGAATTAAAAGCAATCGTGGGCCGTGGGAT CCATCGATTTCAACACGATTGGCGTTTTTTTCATCTTCGAAGCGTTACAT TCGTGCCGCCCGGCCTCGTTGTCGATGGCCACACTGACGGCGGCGTTTTG GTGATACTGTACTGTACTGTACACGACGACGACGATACTGACGCCTAAAA CAGGACGTGGGCTACACGGGCGAGACCGCCGAGTACTTCCAGCTCTTCCA CGTAACCTCCCGCATCGAGCGCTTCGAGGCTGAGCTGGAGCAGCGCAAGC CCACCACCCCCTCTGCTACCGCTTCCCCCAAGAAGAAGAGCAGCGAGAGC AACGGCAAGGAGGCCGGGGGCGGGGATGGCGCGGCGGGGGCGGCAGCGGC AGCAGCGGGTGCGAAGGGCGTCGTGAAGGAGCTCTTCCCGTTCCACGGCT TCTTCGCCAACGCTCCCGCCGGCGACAAGCTGTTCGGGGGCGAGGACGAC GGGGAGGACCTGGAGGTGGCACGGGGCTGCTTCCGGCACATCAGCAAGGT CGGTTGTTGTTGTTGCTGTTGTTGTTTGTTGTTCCGTTGGACGTTTCAAA GCAGTGGTAGGCCCCCTGTAAGGCTGTATGGCGGGTGCTCGAAATCAGGC GGGTACCCTATGTTAGGCGGGGGGAAGTTGGCTGGGGCAGACGGAATAAT CAAGTTGTTTTACGCAATGAATAAGGCGAGTGCCCTGTACAGGGCGGGTG AATCGGTCTGGCGTATACCCGCGTCATTGAGGGCCTACGTCTGTGTGTAC TAAATACCCGTTTTTTGGGGTAATTGGGCTTTGTTATGGTTGTTTTGGTG GTGGCGTCATGGTCGTTGTCGTTGTTGCTGCTGGTGATTGTGGTGATGGT GGTTGATGCACAAGGAAGCCTAGGTGCCACCTCTTTTTTTTTTTTCTTGA AGTGGTGATCAATTTTTTTTGTCAGCTTCCTTTGTTTTTCCTCATTTTTT GTCCCTTCTTTCCCTTTCCTTTTTCTTTTTCCGATGTGTGCAGATGTTCG AGGAGCTGGCGGACTACCGCGCCTTCGAGCTCCTCCGGTCACACTCTGCC CGCAGCGACTACCTCCTCACCAAGCAGGCGAGGATCATCGCCATGACGTG CACGCATGCCGCCCTCATCCGCCGGCGCCTGGTGGAGCTGGGGTTCAAGT ACGACAACATGGTGATGGAGGAGAGCGCGCAGATTCTGGAGGTGGAGACG TTCATCCCCATGATGCTCCAGGCGAGTTGCTGCTATTGTTTGTCATCGTT GTTGGTGGTGGTGGTGATGAATTCGTGCCTGCTGTGGCATTGGTGGAATC AAATCCACGACTTGGGTGTTTGTGTTGGCGCTGTTGGTATCCTTGTTGAC GTATTGTTGTAGTGACATGGGTATGTATCCGCAGCATTCATGCTCCCTCC GTTTTGCTGTTCTTTTTTTTTATGTTTCATTTTTTTTTCGGCATTATGGT ATTTGTTGTTCTTTTTGTGATTCCTTCCTCGACGTTCTTTCTTTTCCCGC AACATGGTACGGTAGACATGCCTTCTCTCCCCTCTCACTTCCGCTGTTGT TATTTTGTTTATTTTTTTGTGCAGGACCTCGACCCCGTACTCGGGTGCCG ACTGAAGCGCGTGACTCTCATCGGCGACCACCACCAGCTTCCCCCCGTCG TCAAGTCGATGGCTTTCCAGAAGTACAGCAAGCTGGACCAGAGCCTCTTC ACTCGGTTCGTACGCCTGGGCACGCCCACGGTGCAGGTAAGTTGTCGC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16087:251..2398+

>mRNA_E-fasciculatus_F_contig16087.4164.1 ID=mRNA_E-fasciculatus_F_contig16087.4164.1|Name=mRNA_E-fasciculatus_F_contig16087.4164.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1920bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16087:251..2398+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TTGTGTCACAGGGACATCGACGAGAGGCATCTGCTGCGGCTGGGAGCGGG
CGAGCGCGAGCTGCGCGAGGACACGATGAAAGACTTTTCCAAGTTCGGAC
GTGTCAACTACACCCTCAAGCGCAGGCTCGAGCTCCTTGCAGAGGTCCAG
AGGTTGGCGGAGACCATCGGGGTCGAGGGGTTGTGTCACAGGGACATCGA
CGAGAGGCATCTGCTGCGGCTGGGAGCGGGCGAGCGCGAGCTGCGCGAGG
ACACGATGAAAGACTTTTCCAAGTTCGGACGTGTCAACTACACCCTCAAG
CGCAGGCTCGAGCTCCTTGCAGAGGTCCAGAGGTTGGCGGAGACCATCGG
GGTCGAGGGGGACGTGGGCTACACGGGCGAGACCGCCGAGTACTTCCAGC
TCTTCCACGTAACCTCCCGCATCGAGCGCTTCGAGGCTGAGCTGGAGCAG
CGCAAGCCCACCACCCCCTCTGCTACCGCTTCCCCCAAGAAGAAGAGCAG
CGAGAGCAACGGCAAGGAGGCCGGGGGCGGGGATGGCGCGGCGGGGGCGG
CAGCGGCAGCAGCGGGTGCGAAGGGCGTCGTGAAGGAGCTCTTCCCGTTC
CACGGCTTCTTCGCCAACGCTCCCGCCGGCGACAAGCTGTTCGGGGGCGA
GGACGACGGGGAGGACCTGGAGGTGGCACGGGGCTGCTTCCGGCACATCA
GCAAGGACGTGGGCTACACGGGCGAGACCGCCGAGTACTTCCAGCTCTTC
CACGTAACCTCCCGCATCGAGCGCTTCGAGGCTGAGCTGGAGCAGCGCAA
GCCCACCACCCCCTCTGCTACCGCTTCCCCCAAGAAGAAGAGCAGCGAGA
GCAACGGCAAGGAGGCCGGGGGCGGGGATGGCGCGGCGGGGGCGGCAGCG
GCAGCAGCGGGTGCGAAGGGCGTCGTGAAGGAGCTCTTCCCGTTCCACGG
CTTCTTCGCCAACGCTCCCGCCGGCGACAAGCTGTTCGGGGGCGAGGACG
ACGGGGAGGACCTGGAGGTGGCACGGGGCTGCTTCCGGCACATCAGCAAG
ATGTTCGAGGAGCTGGCGGACTACCGCGCCTTCGAGCTCCTCCGGTCACA
CTCTGCCCGCAGCGACTACCTCCTCACCAAGCAGGCGAGGATCATCGCCA
TGACGTGCACGCATGCCGCCCTCATCCGCCGGCGCCTGGTGGAGCTGGGG
TTCAAGTACGACAACATGGTGATGGAGGAGAGCGCGCAGATTCTGGAGGT
GGAGACGTTCATCCCCATGATGCTCCAGGCGAGTTGCTGCTATTGTTTGT
CATCGTTGTTGATGTTCGAGGAGCTGGCGGACTACCGCGCCTTCGAGCTC
CTCCGGTCACACTCTGCCCGCAGCGACTACCTCCTCACCAAGCAGGCGAG
GATCATCGCCATGACGTGCACGCATGCCGCCCTCATCCGCCGGCGCCTGG
TGGAGCTGGGGTTCAAGTACGACAACATGGTGATGGAGGAGAGCGCGCAG
ATTCTGGAGGTGGAGACGTTCATCCCCATGATGCTCCAGGCGAGTTGCTG
CTATTGTTTGTCATCGTTGTTGGACCTCGACCCCGTACTCGGGTGCCGAC
TGAAGCGCGTGACTCTCATCGGCGACCACCACCAGCTTCCCCCCGTCGTC
AAGTCGATGGCTTTCCAGAAGTACAGCAAGCTGGACCAGAGCCTCTTCAC
TCGGTTCGTACGCCTGGGCACGCCCACGGTGCAGGTAAGTTGTCGCGACC
TCGACCCCGTACTCGGGTGCCGACTGAAGCGCGTGACTCTCATCGGCGAC
CACCACCAGCTTCCCCCCGTCGTCAAGTCGATGGCTTTCCAGAAGTACAG
CAAGCTGGACCAGAGCCTCTTCACTCGGTTCGTACGCCTGGGCACGCCCA
CGGTGCAGGTAAGTTGTCGC
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