mRNA_E-fasciculatus_F_contig16071.4154.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig16071.4154.1
Unique NamemRNA_E-fasciculatus_F_contig16071.4154.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig16071.4154.1 vs. uniprot
Match: D8LJ62_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ62_ECTSI)

HSP 1 Score: 587 bits (1514), Expect = 2.260e-206
Identity = 290/319 (90.91%), Postives = 300/319 (94.04%), Query Frame = 1
Query:    1 MVSASRPAAAVVFLAAVTAGTSANQGGPELKFRQHEHQPRASPMLPPFLEGQPETWQARSYGADVRVAPHTAAGPGLRSASTGVPASFTIRLAGADSSGARQGQQ--ENPDWEYNVDKKRFIYVWVASEDNVFVAGVRNNGNGTLTATYESSFPGDYLIHVEDVNLRVQDHFGRGRPIVGSPFSLTVSGDPAVDVDALPVCGGQEEEEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLDEPTWLLALGNSILRGVFLTILDMALAQGQKDEFSTSVVKKCWGFIDVRIGNLRISYQ 951
            MVS SRP  AV +LAAVT GT+ANQGGPEL FRQHEHQP ASPMLPPFLEGQPE WQAR YG DVRVAPHTAAGPGLRSASTGVPASFTIRLAG D+SGAR  QQ  +NPDW+YNVDKKRFIYVWVASEDNVFVAGVRNNGNGTLTA YESSFPGDYL+HVEDVNL+VQDHFGRGRPI+GSPFSLTVSGDPAVDVDALPVCGG E EEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLDEP WLLALGNSILRG+FLTILDMALAQGQKDEFSTSVVKKCWGFID+RIGNLRISYQ
Sbjct:    1 MVSVSRPGTAVFYLAAVTVGTAANQGGPELNFRQHEHQPPASPMLPPFLEGQPERWQARFYGPDVRVAPHTAAGPGLRSASTGVPASFTIRLAGVDASGARPEQQGEKNPDWDYNVDKKRFIYVWVASEDNVFVAGVRNNGNGTLTAAYESSFPGDYLVHVEDVNLKVQDHFGRGRPIIGSPFSLTVSGDPAVDVDALPVCGG-EGEEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLDEPAWLLALGNSILRGIFLTILDMALAQGQKDEFSTSVVKKCWGFIDIRIGNLRISYQ 318          
BLAST of mRNA_E-fasciculatus_F_contig16071.4154.1 vs. uniprot
Match: D7FXD9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXD9_ECTSI)

HSP 1 Score: 311 bits (797), Expect = 2.800e-99
Identity = 162/316 (51.27%), Postives = 218/316 (68.99%), Query Frame = 1
Query:   31 VVFLAAVTAGTSANQGG------PELKFRQHEHQPRASPMLPPFLEGQPETWQARSYGADVRVAPHTAAGPGLRSASTGVPASFTIRLAGADSSGARQGQQENPDWEYNVDKKRFIYVWVASEDNVFVAGVRNNGN-GTLTATYESSFPGDYLIHVEDVNLRVQDHFGRGRPIVGSPFSLTVSGD-PAVDVDALPVCGGQEEEEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLD-EPTWLLALGNSILRGVFLTILDMALAQGQKDEFSTSVVKKCWGFIDVRIGNLRISYQ 951
            V  L   TAG  A Q G      P L+   H     AS   P F++G+P+T QA  Y ++   A HTA+G GL  A+ G+ ASFTI+L G +  G+  G    P+WE N    RFIYVW+++ED + +A +  +GN GTLTATY+S FPGDYL++VE+V    Q   G G PIVGSPFSL ++GD P +DV++LPVC  QE+   D+A ++WR G+W+SSN+A+  HGV+R+GWVFQPK+CV++ FSY DLMLLA LD EPTWL+ +G S+ RGVFLT++DM LA GQKD+ +TS + KCWG+ D+ +GNLR++YQ
Sbjct:   10 VAQLVLATAGALAAQRGYPRDAPPSLRLEIHREL-SASANQPEFIQGRPDTDQAHGYSSNESAA-HTASGDGLHEATVGISASFTIQLVGDNLGGS--GGSSLPNWEPN-SSSRFIYVWISNEDQILIAEIVGDGNTGTLTATYKSDFPGDYLVYVEEVQPSEQ---GEGLPIVGSPFSLKIAGDFPTLDVNSLPVCDSQEDGSNDIADTFWRPGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVDMVLAAGQKDDIATSTLGKCWGYTDLLVGNLRLTYQ 317          
BLAST of mRNA_E-fasciculatus_F_contig16071.4154.1 vs. uniprot
Match: D8LHZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHZ4_ECTSI)

HSP 1 Score: 301 bits (771), Expect = 2.350e-95
Identity = 148/273 (54.21%), Postives = 204/273 (74.73%), Query Frame = 1
Query:  145 LEGQPETWQARSYGADVRVAPHTAAGPGLRSASTGVPASFTIRLAGADSSGARQGQQENPDWEYNVDKKRFIYVWVASEDNVFVAGVRNNG--NGTLTATYESSFPGDYLIHVEDVNLRVQDHFGRGRPIVGSPFSLTVSGD-PAVDVDALPVCGGQEEEEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLD-EPTWLLALGNSILRGVFLTILDMALAQGQKDEFSTSVVKKCWGFIDVRIGNLRISYQ 951
             +G+P+  QA SY +  R APHTA+G GL  A+ G PASFTI+L G D  G+       PDW+ N    RFIYVW+A++D + +A V + G  NGTLTATY+S FPGDYL+++++V    +D    G PI+GSPFSLT++GD P +D+++LPVC   E+  +D+A ++WR+G+W+SSN+A+  HGV+R+GWVFQPK+CV++ FSY+DLMLLA LD EPTWLL LG S+ RGVFLT++DM LA GQK +  +SV++KCWG+ DVR+GN R++YQ
Sbjct:   38 FQGKPDNEQAHSYRSHER-APHTASGDGLHKATVGRPASFTIQLVG-DQLGSL------PDWKPNTST-RFIYVWIANKDQILIAEVVDGGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDE---GVPILGSPFSLTIAGDAPTLDINSLPVCSTHEDANKDIADTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLVDMVLAAGQKHDIRSSVIQKCWGYADVRVGNFRLTYQ 298          
BLAST of mRNA_E-fasciculatus_F_contig16071.4154.1 vs. uniprot
Match: A0A6H5JGZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGZ7_9PHAE)

HSP 1 Score: 294 bits (753), Expect = 8.140e-92
Identity = 147/273 (53.85%), Postives = 201/273 (73.63%), Query Frame = 1
Query:  145 LEGQPETWQARSYGADVRVAPHTAAGPGLRSASTGVPASFTIRLAGADSSGARQGQQENPDWEYNVDKKRFIYVWVASEDNVFVAGVRNNG--NGTLTATYESSFPGDYLIHVEDVNLRVQDHFGRGRPIVGSPFSLTVSGD-PAVDVDALPVCGGQEEEEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLD-EPTWLLALGNSILRGVFLTILDMALAQGQKDEFSTSVVKKCWGFIDVRIGNLRISYQ 951
             +G+P+  QA SY +  R APHTA+G GL  A+ G+PASFTI+L G D+ G        P+WE  +  +RFIYVW+A+ED +  A V + G  +GTLTATY+S FPG+Y +H+E+V L  +   G G PI+GSPFSLT++GD P ++V++LPVC   E+   D+A ++WR G+W+SSN+A+  HGV+R+GWVFQPK+CV++ FSY+DLMLLA +  EPTWLL LG S+ RGVFLT++DM LA GQK    +SV+ KCWG+ DVR+GNLR++YQ
Sbjct:   41 FQGKPDNEQAHSYRSHER-APHTASGDGLHKATVGMPASFTIQLVG-DNLG--DFHVLLPNWE-RIRSRRFIYVWIANEDQILTAEVVDGGRKDGTLTATYKSDFPGNYSVHIEEVQLSKK---GEGVPILGSPFSLTIAGDAPTLNVNSLPVCSSDEDANTDIADTFWRPGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASIGGEPTWLLVLGGSVERGVFLTLIDMVLAAGQKQGIRSSVLNKCWGYADVRVGNLRLTYQ 305          
BLAST of mRNA_E-fasciculatus_F_contig16071.4154.1 vs. uniprot
Match: A0A6H5K539_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K539_9PHAE)

HSP 1 Score: 286 bits (733), Expect = 4.980e-90
Identity = 149/285 (52.28%), Postives = 203/285 (71.23%), Query Frame = 1
Query:  115 PRASPMLPPFLEGQPETWQARSYGADVRVAPHTAAGPGLRSASTGVPASFTIRLAGADSSGARQGQQENPDWEYNVDKKRFIYVWVAS--EDNVFVAGVRNNG--NGTLTATYESSFPGDYLIHVEDVNLRVQDHFGRGRPIVGSPFSLTVSGD-PAVDVDALPVCGGQEEEEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLD-EPTWLLALGNSILRGVFLTILDMALAQGQKDEFSTSVVKKCWGFIDVRIGNLRISYQ 951
            P  S + PP  +      QA SY +  R + HTA+G GL  A+ G  ASFTI+L G D  G+       PDW+ N    RFIYVW+A+  +D + +A V + G  NGTLTATY+S FPGDYL+++++V    +D    G PI+GSPFSLT++GD P +DV++LPVC   E+  +D+  ++WR+G+W+SSN+A+  HGV+R+GWVFQPK+CV++ FSY+DLMLLA LD EPTWLL LG S+ RGVFLT++DM LA GQK +  +SVV+KCWG+ DVR+GNLR++YQ
Sbjct:   14 PYFSALTPPARDA-----QAHSYRSLERAS-HTASGDGLHKATVGRSASFTIQLVG-DQLGSL------PDWKPN-SSTRFIYVWIANKDQDEILIAEVADGGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDE---GVPILGSPFSLTIAGDAPTLDVNSLPVCSTHEDTNKDIPDTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLIDMVLAAGQKHDIQSSVVQKCWGYADVRVGNLRLTYQ 281          
BLAST of mRNA_E-fasciculatus_F_contig16071.4154.1 vs. uniprot
Match: D7FXE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE0_ECTSI)

HSP 1 Score: 288 bits (736), Expect = 5.460e-90
Identity = 140/250 (56.00%), Postives = 186/250 (74.40%), Query Frame = 1
Query:  214 AAGPGLRSASTGVPASFTIRLAGADSSGARQGQQENPDWEYNVDKKRFIYVWVASEDNVFVAGVRNNG--NGTLTATYESSFPGDYLIHVEDVNLRVQDHFGRGRPIVGSPFSLTVSGD-PAVDVDALPVCGGQEEEEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLD-EPTWLLALGNSILRGVFLTILDMALAQGQKDEFSTSVVKKCWGFIDVRIGNLRISYQ 951
            A+G GL  A+ G+ ASFTI+L G +  G        PDWE N    RFIYVW++S+D + +A V  +G  NGTLTATY+S FPGDYL+HVE+V        G G PIVGSPFSL ++GD P +DV +LPVCG Q++   D+A ++WR G+W+S+N+A+  HGV+R GWVFQPK+CV++ FSY DLMLLA  D EPTWL+ +G S+ RGVFLT++DMALA GQKD+ +TSV++KCWG+ D+R+GNLR++YQ
Sbjct:    2 ASGDGLHQATVGISASFTIQLVGDEVGGGGS----LPDWEPN-SSFRFIYVWISSKDQILIAEVVGDGSNNGTLTATYKSDFPGDYLVHVEEVQ---PSERGEGLPIVGSPFSLKIAGDFPTLDVHSLPVCGSQDDGSTDIADTFWRPGTWLSANVASAAHGVMRTGWVFQPKSCVFDTFSYQDLMLLASPDGEPTWLVVVGGSVQRGVFLTLVDMALAAGQKDDMATSVLEKCWGYADLRVGNLRLTYQ 243          
BLAST of mRNA_E-fasciculatus_F_contig16071.4154.1 vs. uniprot
Match: A0A6H5K8P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8P1_9PHAE)

HSP 1 Score: 286 bits (731), Expect = 2.100e-88
Identity = 137/235 (58.30%), Postives = 179/235 (76.17%), Query Frame = 1
Query:  259 SFTIRLAGADSSGARQGQQENPDWEYNVDKKRFIYVWVASEDNVFVAGVRNNG--NGTLTATYESSFPGDYLIHVEDVNLRVQDHFGRGRPIVGSPFSLTVSGD-PAVDVDALPVCGGQEEEEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLD-EPTWLLALGNSILRGVFLTILDMALAQGQKDEFSTSVVKKCWGFIDVRIGNLRISYQ 951
            SFTI L G +  G        PDWE N    RFIYVW+ S+D + +A V  +G  NGTLTATY+S FPGDYL+HVE+V    +   G G PIVGSPFSLT++GD P +DVD+LPVCG Q++   D+A ++WR G+W+SSN+A+  HGV+R+GWVFQPK+CV++ FSY DLMLLA LD EPTWL+ +G S+ RGVFLT++DMALA GQKD+ +TSV++KCWG+ D+R+GNLR++YQ
Sbjct:    2 SFTIELVGDEIGGGGS----LPDWEPN-SSFRFIYVWICSKDQILIAEVVGDGSNNGTLTATYQSDFPGDYLVHVEEVQPSKR---GEGLPIVGSPFSLTITGDGPTLDVDSLPVCGSQDDGSNDIADTFWRPGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVDMALAAGQKDDMATSVLQKCWGYADLRVGNLRLTYQ 228          
BLAST of mRNA_E-fasciculatus_F_contig16071.4154.1 vs. uniprot
Match: D7FLN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLN2_ECTSI)

HSP 1 Score: 270 bits (690), Expect = 3.490e-84
Identity = 131/213 (61.50%), Postives = 164/213 (77.00%), Query Frame = 1
Query:  340 VDKKRFIYVWVASEDNVFVAGVRNNGNGTLTATYESSFPGDYLIHVEDV--NLRVQDHFGRGRP------IVGSPFSLTVSGDPAVDVDALPVCGGQEEEEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLA-GLDEPTWLLALGNSILRGVFLTILDMALAQGQKDEFSTSVVKKCWGFIDVRIGNLRISYQ 951
            +D K F+YVW+AS D+V  A V +NG+GTLTATYES +PGDYL+HV+DV  ++ V    G+ RP      IV SPF LT+SG+ AVDVD LP+C   E  +ED   ++WRTGSW+SS  A+  HGVLRDGWVFQPKTCV++ FSYDDLMLLA G  EPTWLL LG S+ RGVFLT++DM LAQGQK +F+TS ++KCWGF +VR+GNLR++YQ
Sbjct:    1 MDDKHFVYVWIASTDHVLHAAVVDNGDGTLTATYESPYPGDYLVHVQDVCTDMSVVGR-GKKRPGERAKAIVDSPFRLTISGEIAVDVDDLPLCDA-EHPQEDEEDTFWRTGSWISSKFASAKHGVLRDGWVFQPKTCVHDTFSYDDLMLLATGSKEPTWLLILGTSVQRGVFLTLVDMVLAQGQKSDFATSAIQKCWGFAEVRVGNLRLTYQ 211          
BLAST of mRNA_E-fasciculatus_F_contig16071.4154.1 vs. uniprot
Match: A0A6H5JGW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGW9_9PHAE)

HSP 1 Score: 242 bits (617), Expect = 2.760e-72
Identity = 109/192 (56.77%), Postives = 156/192 (81.25%), Query Frame = 1
Query:  388 VFVAGVRNNG--NGTLTATYESSFPGDYLIHVEDVNLRVQDHFGRGRPIVGSPFSLTVSGD-PAVDVDALPVCGGQEEEEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLD-EPTWLLALGNSILRGVFLTILDMALAQGQKDEFSTSVVKKCWGFIDVRIGNLRISYQ 951
            + +A V ++G  NGTLTATY+S FPGDYL+++++V    +D    G PI+GSPFSLT++GD P +DV++LPVC   ++  +++A ++WR+G+W+SS++A+  HGV+R+GWVFQPK+CV++ FSY+DLMLLA LD EPTWLL LG S+ RGVFLT++DM LA GQK++  +SVV+KCWG+ DVR+GNLR++YQ
Sbjct:   14 ILIAEVADDGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDE---GVPILGSPFSLTIAGDAPTLDVNSLPVCSTHDDANKNIADTFWRSGTWLSSSVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLIDMVLAAGQKNDIQSSVVQKCWGYADVRVGNLRLTYQ 202          
BLAST of mRNA_E-fasciculatus_F_contig16071.4154.1 vs. uniprot
Match: D7G348_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G348_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 5.690e-51
Identity = 88/193 (45.60%), Postives = 126/193 (65.28%), Query Frame = 1
Query:  382 DNVFVAGVRNNG--NGTLTATYESSFPGDYLIHVEDVNLRVQDHFGRGRPIVGSPFSLTVSGDPAVDVDALPVCGGQEEEEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLD-EPTWLLALGNSILRGVFLTILDMALAQGQKDEFSTSVVKKCWGFIDVRIGNLRISYQ 951
            + + +A V ++G  NGTLTATY+S FPG Y +++++V L                                     +++   D+A ++WR G+W+SSN+A+  HGVLR+GWVFQP +CV + FSY+DLMLLA LD EPTWLL LG S+ RGVFLT++DM LA GQK++  +SV++KCWG+ DV++GNLR++YQ
Sbjct:   48 EQILIAEVVDDGSKNGTLTATYKSDFPGTYWVYIDEVEL------------------------------------SRKDANNDIADTFWRPGTWLSSNVASAAHGVLRNGWVFQPISCVLDTFSYEDLMLLASLDKEPTWLLVLGGSVQRGVFLTLIDMVLAAGQKNDIISSVLRKCWGYADVQVGNLRLTYQ 204          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16071.4154.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LJ62_ECTSI2.260e-20690.91Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FXD9_ECTSI2.800e-9951.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LHZ4_ECTSI2.350e-9554.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGZ7_9PHAE8.140e-9253.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K539_9PHAE4.980e-9052.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXE0_ECTSI5.460e-9056.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K8P1_9PHAE2.100e-8858.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLN2_ECTSI3.490e-8461.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGW9_9PHAE2.760e-7256.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G348_ECTSI5.690e-5145.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig16071contigE-fasciculatus_F_contig16071:1326..2639 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score592.8
Seed ortholog evalue9.4e-167
Seed eggNOG ortholog2880.D8LJ62
EggNOG OGs2E5RD@1,2SCI8@2759
Ec32 ortholog descriptionImmunoglobulin E-set
Ec32 orthologEc-02_004900.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons2
Model size951
Cds size951
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928074.6164503-CDS-E-fasciculatus_F_contig16071:1325..14961622928074.6164503-CDS-E-fasciculatus_F_contig16071:1325..1496Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16071 1326..1496 +
1695995812.7201016-CDS-E-fasciculatus_F_contig16071:1325..14961695995812.7201016-CDS-E-fasciculatus_F_contig16071:1325..1496Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16071 1326..1496 +
1622928074.6319244-CDS-E-fasciculatus_F_contig16071:1859..26391622928074.6319244-CDS-E-fasciculatus_F_contig16071:1859..2639Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16071 1860..2639 +
1695995812.7325363-CDS-E-fasciculatus_F_contig16071:1859..26391695995812.7325363-CDS-E-fasciculatus_F_contig16071:1859..2639Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16071 1860..2639 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig16071.4154.1prot_E-fasciculatus_F_contig16071.4154.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig16071 1326..2639 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig16071.4154.1

>prot_E-fasciculatus_F_contig16071.4154.1 ID=prot_E-fasciculatus_F_contig16071.4154.1|Name=mRNA_E-fasciculatus_F_contig16071.4154.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=317bp
MVSASRPAAAVVFLAAVTAGTSANQGGPELKFRQHEHQPRASPMLPPFLE
GQPETWQARSYGADVRVAPHTAAGPGLRSASTGVPASFTIRLAGADSSGA
RQGQQENPDWEYNVDKKRFIYVWVASEDNVFVAGVRNNGNGTLTATYESS
FPGDYLIHVEDVNLRVQDHFGRGRPIVGSPFSLTVSGDPAVDVDALPVCG
GQEEEEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSY
DDLMLLAGLDEPTWLLALGNSILRGVFLTILDMALAQGQKDEFSTSVVKK
CWGFIDVRIGNLRISYQ
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mRNA from alignment at E-fasciculatus_F_contig16071:1326..2639+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig16071.4154.1 ID=mRNA_E-fasciculatus_F_contig16071.4154.1|Name=mRNA_E-fasciculatus_F_contig16071.4154.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1314bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16071:1326..2639+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGTGTCGGCGTCGCGGCCCGCCGCCGCCGTGGTGTTTTTGGCGGCGGT TACGGCGGGGACATCGGCGAACCAGGGCGGCCCAGAGTTGAAGTTTCGTC AACATGAGCACCAGCCGCGAGCCTCGCCGATGCTGCCGCCCTTCCTCGAG GGGCAACCGGAGACTTGGCAGGTGCGTCCAGAAAGAACTGCTCTCGGCGG AGTTCGCCGAGTTGGAAAGGCATGTGCGTACATATCATACTACTGCCGTT CGAGGACCTCGCGGAGACAGCGGTCGCAGAAGTGCCTCAAGAGCATCGCG AGTTTTTTTTTTGCGAAACCTCCAAGTAGCGCAGCCCTGTGTGGTTAGCG TCAACGCGTGTGGTTCGCCGTACATGTTGCCAGCCTTGGTATTCGTGCGG GTTGATTTATTCGAAACCGGCGTGCTGTACCCCTCGCCCTTCGGGGGATT TTAGGTCGGCGCAGTGCTTGTAGCTTGCTTTTCTACCCATTTTTCATTCT CATTCCGATCATCGTGCCGCGTCGCGACATCCAGGCACGCTCGTACGGCG CAGACGTACGCGTGGCGCCTCACACCGCGGCCGGGCCGGGGCTCCGCTCG GCGTCCACCGGGGTCCCGGCGTCCTTCACGATCCGGTTGGCCGGCGCCGA CAGCAGTGGGGCTCGGCAGGGGCAGCAGGAGAATCCCGACTGGGAGTACA ACGTGGACAAGAAGCGGTTCATTTACGTCTGGGTGGCGAGCGAGGACAAC GTTTTCGTCGCCGGGGTGCGGAACAACGGTAACGGGACTCTCACCGCCAC CTACGAGAGCTCCTTTCCGGGGGACTACCTCATCCACGTCGAAGACGTCA ACCTGCGGGTCCAAGACCACTTCGGGCGCGGCAGGCCGATCGTCGGAAGC CCGTTCTCCCTGACCGTTTCGGGAGACCCTGCGGTCGACGTGGACGCCCT CCCCGTCTGCGGCGGACAAGAAGAGGAGGAGGAAGACCTGGCGTCGTCCT ACTGGCGCACGGGCTCGTGGGTCTCCTCCAACATCGCGGCCAGGAACCAC GGCGTCCTGCGGGACGGGTGGGTGTTCCAGCCCAAGACGTGCGTCTACGA GGCGTTCTCCTACGACGACCTCATGCTCCTGGCAGGCCTGGACGAGCCCA CGTGGCTTCTCGCCCTGGGGAACTCCATCCTGCGAGGCGTCTTCCTGACG ATCTTGGACATGGCTCTCGCCCAAGGGCAGAAGGACGAGTTTTCCACCAG CGTCGTGAAGAAGTGCTGGGGGTTCATCGACGTCCGTATCGGCAACCTGC GGATAAGCTACCAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16071:1326..2639+

>mRNA_E-fasciculatus_F_contig16071.4154.1 ID=mRNA_E-fasciculatus_F_contig16071.4154.1|Name=mRNA_E-fasciculatus_F_contig16071.4154.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1902bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16071:1326..2639+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGTGTCGGCGTCGCGGCCCGCCGCCGCCGTGGTGTTTTTGGCGGCGGT
TACGGCGGGGACATCGGCGAACCAGGGCGGCCCAGAGTTGAAGTTTCGTC
AACATGAGCACCAGCCGCGAGCCTCGCCGATGCTGCCGCCCTTCCTCGAG
GGGCAACCGGAGACTTGGCAGATGGTGTCGGCGTCGCGGCCCGCCGCCGC
CGTGGTGTTTTTGGCGGCGGTTACGGCGGGGACATCGGCGAACCAGGGCG
GCCCAGAGTTGAAGTTTCGTCAACATGAGCACCAGCCGCGAGCCTCGCCG
ATGCTGCCGCCCTTCCTCGAGGGGCAACCGGAGACTTGGCAGGCACGCTC
GTACGGCGCAGACGTACGCGTGGCGCCTCACACCGCGGCCGGGCCGGGGC
TCCGCTCGGCGTCCACCGGGGTCCCGGCGTCCTTCACGATCCGGTTGGCC
GGCGCCGACAGCAGTGGGGCTCGGCAGGGGCAGCAGGAGAATCCCGACTG
GGAGTACAACGTGGACAAGAAGCGGTTCATTTACGTCTGGGTGGCGAGCG
AGGACAACGTTTTCGTCGCCGGGGTGCGGAACAACGGTAACGGGACTCTC
ACCGCCACCTACGAGAGCTCCTTTCCGGGGGACTACCTCATCCACGTCGA
AGACGTCAACCTGCGGGTCCAAGACCACTTCGGGCGCGGCAGGCCGATCG
TCGGAAGCCCGTTCTCCCTGACCGTTTCGGGAGACCCTGCGGTCGACGTG
GACGCCCTCCCCGTCTGCGGCGGACAAGAAGAGGAGGAGGAAGACCTGGC
GTCGTCCTACTGGCGCACGGGCTCGTGGGTCTCCTCCAACATCGCGGCCA
GGAACCACGGCGTCCTGCGGGACGGGTGGGTGTTCCAGCCCAAGACGTGC
GTCTACGAGGCGTTCTCCTACGACGACCTCATGCTCCTGGCAGGCCTGGA
CGAGCCCACGTGGCTTCTCGCCCTGGGGAACTCCATCCTGCGAGGCGTCT
TCCTGACGATCTTGGACATGGCTCTCGCCCAAGGGCAGAAGGACGAGTTT
TCCACCAGCGTCGTGAAGAAGTGCTGGGGGTTCATCGACGTCCGTATCGG
CAACCTGCGGATAAGCTACCAGGCACGCTCGTACGGCGCAGACGTACGCG
TGGCGCCTCACACCGCGGCCGGGCCGGGGCTCCGCTCGGCGTCCACCGGG
GTCCCGGCGTCCTTCACGATCCGGTTGGCCGGCGCCGACAGCAGTGGGGC
TCGGCAGGGGCAGCAGGAGAATCCCGACTGGGAGTACAACGTGGACAAGA
AGCGGTTCATTTACGTCTGGGTGGCGAGCGAGGACAACGTTTTCGTCGCC
GGGGTGCGGAACAACGGTAACGGGACTCTCACCGCCACCTACGAGAGCTC
CTTTCCGGGGGACTACCTCATCCACGTCGAAGACGTCAACCTGCGGGTCC
AAGACCACTTCGGGCGCGGCAGGCCGATCGTCGGAAGCCCGTTCTCCCTG
ACCGTTTCGGGAGACCCTGCGGTCGACGTGGACGCCCTCCCCGTCTGCGG
CGGACAAGAAGAGGAGGAGGAAGACCTGGCGTCGTCCTACTGGCGCACGG
GCTCGTGGGTCTCCTCCAACATCGCGGCCAGGAACCACGGCGTCCTGCGG
GACGGGTGGGTGTTCCAGCCCAAGACGTGCGTCTACGAGGCGTTCTCCTA
CGACGACCTCATGCTCCTGGCAGGCCTGGACGAGCCCACGTGGCTTCTCG
CCCTGGGGAACTCCATCCTGCGAGGCGTCTTCCTGACGATCTTGGACATG
GCTCTCGCCCAAGGGCAGAAGGACGAGTTTTCCACCAGCGTCGTGAAGAA
GTGCTGGGGGTTCATCGACGTCCGTATCGGCAACCTGCGGATAAGCTACC
AG
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