mRNA_E-fasciculatus_F_contig16071.4154.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig16071.4154.1 vs. uniprot
Match: D8LJ62_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ62_ECTSI) HSP 1 Score: 587 bits (1514), Expect = 2.260e-206 Identity = 290/319 (90.91%), Postives = 300/319 (94.04%), Query Frame = 1
Query: 1 MVSASRPAAAVVFLAAVTAGTSANQGGPELKFRQHEHQPRASPMLPPFLEGQPETWQARSYGADVRVAPHTAAGPGLRSASTGVPASFTIRLAGADSSGARQGQQ--ENPDWEYNVDKKRFIYVWVASEDNVFVAGVRNNGNGTLTATYESSFPGDYLIHVEDVNLRVQDHFGRGRPIVGSPFSLTVSGDPAVDVDALPVCGGQEEEEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLDEPTWLLALGNSILRGVFLTILDMALAQGQKDEFSTSVVKKCWGFIDVRIGNLRISYQ 951
MVS SRP AV +LAAVT GT+ANQGGPEL FRQHEHQP ASPMLPPFLEGQPE WQAR YG DVRVAPHTAAGPGLRSASTGVPASFTIRLAG D+SGAR QQ +NPDW+YNVDKKRFIYVWVASEDNVFVAGVRNNGNGTLTA YESSFPGDYL+HVEDVNL+VQDHFGRGRPI+GSPFSLTVSGDPAVDVDALPVCGG E EEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLDEP WLLALGNSILRG+FLTILDMALAQGQKDEFSTSVVKKCWGFID+RIGNLRISYQ
Sbjct: 1 MVSVSRPGTAVFYLAAVTVGTAANQGGPELNFRQHEHQPPASPMLPPFLEGQPERWQARFYGPDVRVAPHTAAGPGLRSASTGVPASFTIRLAGVDASGARPEQQGEKNPDWDYNVDKKRFIYVWVASEDNVFVAGVRNNGNGTLTAAYESSFPGDYLVHVEDVNLKVQDHFGRGRPIIGSPFSLTVSGDPAVDVDALPVCGG-EGEEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLDEPAWLLALGNSILRGIFLTILDMALAQGQKDEFSTSVVKKCWGFIDIRIGNLRISYQ 318
BLAST of mRNA_E-fasciculatus_F_contig16071.4154.1 vs. uniprot
Match: D7FXD9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXD9_ECTSI) HSP 1 Score: 311 bits (797), Expect = 2.800e-99 Identity = 162/316 (51.27%), Postives = 218/316 (68.99%), Query Frame = 1
Query: 31 VVFLAAVTAGTSANQGG------PELKFRQHEHQPRASPMLPPFLEGQPETWQARSYGADVRVAPHTAAGPGLRSASTGVPASFTIRLAGADSSGARQGQQENPDWEYNVDKKRFIYVWVASEDNVFVAGVRNNGN-GTLTATYESSFPGDYLIHVEDVNLRVQDHFGRGRPIVGSPFSLTVSGD-PAVDVDALPVCGGQEEEEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLD-EPTWLLALGNSILRGVFLTILDMALAQGQKDEFSTSVVKKCWGFIDVRIGNLRISYQ 951
V L TAG A Q G P L+ H AS P F++G+P+T QA Y ++ A HTA+G GL A+ G+ ASFTI+L G + G+ G P+WE N RFIYVW+++ED + +A + +GN GTLTATY+S FPGDYL++VE+V Q G G PIVGSPFSL ++GD P +DV++LPVC QE+ D+A ++WR G+W+SSN+A+ HGV+R+GWVFQPK+CV++ FSY DLMLLA LD EPTWL+ +G S+ RGVFLT++DM LA GQKD+ +TS + KCWG+ D+ +GNLR++YQ
Sbjct: 10 VAQLVLATAGALAAQRGYPRDAPPSLRLEIHREL-SASANQPEFIQGRPDTDQAHGYSSNESAA-HTASGDGLHEATVGISASFTIQLVGDNLGGS--GGSSLPNWEPN-SSSRFIYVWISNEDQILIAEIVGDGNTGTLTATYKSDFPGDYLVYVEEVQPSEQ---GEGLPIVGSPFSLKIAGDFPTLDVNSLPVCDSQEDGSNDIADTFWRPGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVDMVLAAGQKDDIATSTLGKCWGYTDLLVGNLRLTYQ 317
BLAST of mRNA_E-fasciculatus_F_contig16071.4154.1 vs. uniprot
Match: D8LHZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHZ4_ECTSI) HSP 1 Score: 301 bits (771), Expect = 2.350e-95 Identity = 148/273 (54.21%), Postives = 204/273 (74.73%), Query Frame = 1
Query: 145 LEGQPETWQARSYGADVRVAPHTAAGPGLRSASTGVPASFTIRLAGADSSGARQGQQENPDWEYNVDKKRFIYVWVASEDNVFVAGVRNNG--NGTLTATYESSFPGDYLIHVEDVNLRVQDHFGRGRPIVGSPFSLTVSGD-PAVDVDALPVCGGQEEEEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLD-EPTWLLALGNSILRGVFLTILDMALAQGQKDEFSTSVVKKCWGFIDVRIGNLRISYQ 951
+G+P+ QA SY + R APHTA+G GL A+ G PASFTI+L G D G+ PDW+ N RFIYVW+A++D + +A V + G NGTLTATY+S FPGDYL+++++V +D G PI+GSPFSLT++GD P +D+++LPVC E+ +D+A ++WR+G+W+SSN+A+ HGV+R+GWVFQPK+CV++ FSY+DLMLLA LD EPTWLL LG S+ RGVFLT++DM LA GQK + +SV++KCWG+ DVR+GN R++YQ
Sbjct: 38 FQGKPDNEQAHSYRSHER-APHTASGDGLHKATVGRPASFTIQLVG-DQLGSL------PDWKPNTST-RFIYVWIANKDQILIAEVVDGGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDE---GVPILGSPFSLTIAGDAPTLDINSLPVCSTHEDANKDIADTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLVDMVLAAGQKHDIRSSVIQKCWGYADVRVGNFRLTYQ 298
BLAST of mRNA_E-fasciculatus_F_contig16071.4154.1 vs. uniprot
Match: A0A6H5JGZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGZ7_9PHAE) HSP 1 Score: 294 bits (753), Expect = 8.140e-92 Identity = 147/273 (53.85%), Postives = 201/273 (73.63%), Query Frame = 1
Query: 145 LEGQPETWQARSYGADVRVAPHTAAGPGLRSASTGVPASFTIRLAGADSSGARQGQQENPDWEYNVDKKRFIYVWVASEDNVFVAGVRNNG--NGTLTATYESSFPGDYLIHVEDVNLRVQDHFGRGRPIVGSPFSLTVSGD-PAVDVDALPVCGGQEEEEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLD-EPTWLLALGNSILRGVFLTILDMALAQGQKDEFSTSVVKKCWGFIDVRIGNLRISYQ 951
+G+P+ QA SY + R APHTA+G GL A+ G+PASFTI+L G D+ G P+WE + +RFIYVW+A+ED + A V + G +GTLTATY+S FPG+Y +H+E+V L + G G PI+GSPFSLT++GD P ++V++LPVC E+ D+A ++WR G+W+SSN+A+ HGV+R+GWVFQPK+CV++ FSY+DLMLLA + EPTWLL LG S+ RGVFLT++DM LA GQK +SV+ KCWG+ DVR+GNLR++YQ
Sbjct: 41 FQGKPDNEQAHSYRSHER-APHTASGDGLHKATVGMPASFTIQLVG-DNLG--DFHVLLPNWE-RIRSRRFIYVWIANEDQILTAEVVDGGRKDGTLTATYKSDFPGNYSVHIEEVQLSKK---GEGVPILGSPFSLTIAGDAPTLNVNSLPVCSSDEDANTDIADTFWRPGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASIGGEPTWLLVLGGSVERGVFLTLIDMVLAAGQKQGIRSSVLNKCWGYADVRVGNLRLTYQ 305
BLAST of mRNA_E-fasciculatus_F_contig16071.4154.1 vs. uniprot
Match: A0A6H5K539_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K539_9PHAE) HSP 1 Score: 286 bits (733), Expect = 4.980e-90 Identity = 149/285 (52.28%), Postives = 203/285 (71.23%), Query Frame = 1
Query: 115 PRASPMLPPFLEGQPETWQARSYGADVRVAPHTAAGPGLRSASTGVPASFTIRLAGADSSGARQGQQENPDWEYNVDKKRFIYVWVAS--EDNVFVAGVRNNG--NGTLTATYESSFPGDYLIHVEDVNLRVQDHFGRGRPIVGSPFSLTVSGD-PAVDVDALPVCGGQEEEEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLD-EPTWLLALGNSILRGVFLTILDMALAQGQKDEFSTSVVKKCWGFIDVRIGNLRISYQ 951
P S + PP + QA SY + R + HTA+G GL A+ G ASFTI+L G D G+ PDW+ N RFIYVW+A+ +D + +A V + G NGTLTATY+S FPGDYL+++++V +D G PI+GSPFSLT++GD P +DV++LPVC E+ +D+ ++WR+G+W+SSN+A+ HGV+R+GWVFQPK+CV++ FSY+DLMLLA LD EPTWLL LG S+ RGVFLT++DM LA GQK + +SVV+KCWG+ DVR+GNLR++YQ
Sbjct: 14 PYFSALTPPARDA-----QAHSYRSLERAS-HTASGDGLHKATVGRSASFTIQLVG-DQLGSL------PDWKPN-SSTRFIYVWIANKDQDEILIAEVADGGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDE---GVPILGSPFSLTIAGDAPTLDVNSLPVCSTHEDTNKDIPDTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLIDMVLAAGQKHDIQSSVVQKCWGYADVRVGNLRLTYQ 281
BLAST of mRNA_E-fasciculatus_F_contig16071.4154.1 vs. uniprot
Match: D7FXE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE0_ECTSI) HSP 1 Score: 288 bits (736), Expect = 5.460e-90 Identity = 140/250 (56.00%), Postives = 186/250 (74.40%), Query Frame = 1
Query: 214 AAGPGLRSASTGVPASFTIRLAGADSSGARQGQQENPDWEYNVDKKRFIYVWVASEDNVFVAGVRNNG--NGTLTATYESSFPGDYLIHVEDVNLRVQDHFGRGRPIVGSPFSLTVSGD-PAVDVDALPVCGGQEEEEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLD-EPTWLLALGNSILRGVFLTILDMALAQGQKDEFSTSVVKKCWGFIDVRIGNLRISYQ 951
A+G GL A+ G+ ASFTI+L G + G PDWE N RFIYVW++S+D + +A V +G NGTLTATY+S FPGDYL+HVE+V G G PIVGSPFSL ++GD P +DV +LPVCG Q++ D+A ++WR G+W+S+N+A+ HGV+R GWVFQPK+CV++ FSY DLMLLA D EPTWL+ +G S+ RGVFLT++DMALA GQKD+ +TSV++KCWG+ D+R+GNLR++YQ
Sbjct: 2 ASGDGLHQATVGISASFTIQLVGDEVGGGGS----LPDWEPN-SSFRFIYVWISSKDQILIAEVVGDGSNNGTLTATYKSDFPGDYLVHVEEVQ---PSERGEGLPIVGSPFSLKIAGDFPTLDVHSLPVCGSQDDGSTDIADTFWRPGTWLSANVASAAHGVMRTGWVFQPKSCVFDTFSYQDLMLLASPDGEPTWLVVVGGSVQRGVFLTLVDMALAAGQKDDMATSVLEKCWGYADLRVGNLRLTYQ 243
BLAST of mRNA_E-fasciculatus_F_contig16071.4154.1 vs. uniprot
Match: A0A6H5K8P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8P1_9PHAE) HSP 1 Score: 286 bits (731), Expect = 2.100e-88 Identity = 137/235 (58.30%), Postives = 179/235 (76.17%), Query Frame = 1
Query: 259 SFTIRLAGADSSGARQGQQENPDWEYNVDKKRFIYVWVASEDNVFVAGVRNNG--NGTLTATYESSFPGDYLIHVEDVNLRVQDHFGRGRPIVGSPFSLTVSGD-PAVDVDALPVCGGQEEEEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLD-EPTWLLALGNSILRGVFLTILDMALAQGQKDEFSTSVVKKCWGFIDVRIGNLRISYQ 951
SFTI L G + G PDWE N RFIYVW+ S+D + +A V +G NGTLTATY+S FPGDYL+HVE+V + G G PIVGSPFSLT++GD P +DVD+LPVCG Q++ D+A ++WR G+W+SSN+A+ HGV+R+GWVFQPK+CV++ FSY DLMLLA LD EPTWL+ +G S+ RGVFLT++DMALA GQKD+ +TSV++KCWG+ D+R+GNLR++YQ
Sbjct: 2 SFTIELVGDEIGGGGS----LPDWEPN-SSFRFIYVWICSKDQILIAEVVGDGSNNGTLTATYQSDFPGDYLVHVEEVQPSKR---GEGLPIVGSPFSLTITGDGPTLDVDSLPVCGSQDDGSNDIADTFWRPGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVDMALAAGQKDDMATSVLQKCWGYADLRVGNLRLTYQ 228
BLAST of mRNA_E-fasciculatus_F_contig16071.4154.1 vs. uniprot
Match: D7FLN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLN2_ECTSI) HSP 1 Score: 270 bits (690), Expect = 3.490e-84 Identity = 131/213 (61.50%), Postives = 164/213 (77.00%), Query Frame = 1
Query: 340 VDKKRFIYVWVASEDNVFVAGVRNNGNGTLTATYESSFPGDYLIHVEDV--NLRVQDHFGRGRP------IVGSPFSLTVSGDPAVDVDALPVCGGQEEEEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLA-GLDEPTWLLALGNSILRGVFLTILDMALAQGQKDEFSTSVVKKCWGFIDVRIGNLRISYQ 951
+D K F+YVW+AS D+V A V +NG+GTLTATYES +PGDYL+HV+DV ++ V G+ RP IV SPF LT+SG+ AVDVD LP+C E +ED ++WRTGSW+SS A+ HGVLRDGWVFQPKTCV++ FSYDDLMLLA G EPTWLL LG S+ RGVFLT++DM LAQGQK +F+TS ++KCWGF +VR+GNLR++YQ
Sbjct: 1 MDDKHFVYVWIASTDHVLHAAVVDNGDGTLTATYESPYPGDYLVHVQDVCTDMSVVGR-GKKRPGERAKAIVDSPFRLTISGEIAVDVDDLPLCDA-EHPQEDEEDTFWRTGSWISSKFASAKHGVLRDGWVFQPKTCVHDTFSYDDLMLLATGSKEPTWLLILGTSVQRGVFLTLVDMVLAQGQKSDFATSAIQKCWGFAEVRVGNLRLTYQ 211
BLAST of mRNA_E-fasciculatus_F_contig16071.4154.1 vs. uniprot
Match: A0A6H5JGW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGW9_9PHAE) HSP 1 Score: 242 bits (617), Expect = 2.760e-72 Identity = 109/192 (56.77%), Postives = 156/192 (81.25%), Query Frame = 1
Query: 388 VFVAGVRNNG--NGTLTATYESSFPGDYLIHVEDVNLRVQDHFGRGRPIVGSPFSLTVSGD-PAVDVDALPVCGGQEEEEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLD-EPTWLLALGNSILRGVFLTILDMALAQGQKDEFSTSVVKKCWGFIDVRIGNLRISYQ 951
+ +A V ++G NGTLTATY+S FPGDYL+++++V +D G PI+GSPFSLT++GD P +DV++LPVC ++ +++A ++WR+G+W+SS++A+ HGV+R+GWVFQPK+CV++ FSY+DLMLLA LD EPTWLL LG S+ RGVFLT++DM LA GQK++ +SVV+KCWG+ DVR+GNLR++YQ
Sbjct: 14 ILIAEVADDGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDE---GVPILGSPFSLTIAGDAPTLDVNSLPVCSTHDDANKNIADTFWRSGTWLSSSVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLIDMVLAAGQKNDIQSSVVQKCWGYADVRVGNLRLTYQ 202
BLAST of mRNA_E-fasciculatus_F_contig16071.4154.1 vs. uniprot
Match: D7G348_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G348_ECTSI) HSP 1 Score: 183 bits (464), Expect = 5.690e-51 Identity = 88/193 (45.60%), Postives = 126/193 (65.28%), Query Frame = 1
Query: 382 DNVFVAGVRNNG--NGTLTATYESSFPGDYLIHVEDVNLRVQDHFGRGRPIVGSPFSLTVSGDPAVDVDALPVCGGQEEEEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLD-EPTWLLALGNSILRGVFLTILDMALAQGQKDEFSTSVVKKCWGFIDVRIGNLRISYQ 951
+ + +A V ++G NGTLTATY+S FPG Y +++++V L +++ D+A ++WR G+W+SSN+A+ HGVLR+GWVFQP +CV + FSY+DLMLLA LD EPTWLL LG S+ RGVFLT++DM LA GQK++ +SV++KCWG+ DV++GNLR++YQ
Sbjct: 48 EQILIAEVVDDGSKNGTLTATYKSDFPGTYWVYIDEVEL------------------------------------SRKDANNDIADTFWRPGTWLSSNVASAAHGVLRNGWVFQPISCVLDTFSYEDLMLLASLDKEPTWLLVLGGSVQRGVFLTLIDMVLAAGQKNDIISSVLRKCWGYADVQVGNLRLTYQ 204 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16071.4154.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig16071.4154.1 >prot_E-fasciculatus_F_contig16071.4154.1 ID=prot_E-fasciculatus_F_contig16071.4154.1|Name=mRNA_E-fasciculatus_F_contig16071.4154.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=317bp MVSASRPAAAVVFLAAVTAGTSANQGGPELKFRQHEHQPRASPMLPPFLEback to top mRNA from alignment at E-fasciculatus_F_contig16071:1326..2639+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig16071.4154.1 ID=mRNA_E-fasciculatus_F_contig16071.4154.1|Name=mRNA_E-fasciculatus_F_contig16071.4154.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1314bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16071:1326..2639+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16071:1326..2639+ >mRNA_E-fasciculatus_F_contig16071.4154.1 ID=mRNA_E-fasciculatus_F_contig16071.4154.1|Name=mRNA_E-fasciculatus_F_contig16071.4154.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1902bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16071:1326..2639+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |