mRNA_E-fasciculatus_F_contig16070.4153.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig16070.4153.1 vs. uniprot
Match: A0A6H5KIH1_9PHAE (PPM-type phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIH1_9PHAE) HSP 1 Score: 288 bits (736), Expect = 6.120e-88 Identity = 140/143 (97.90%), Postives = 142/143 (99.30%), Query Frame = 1
Query: 1 LSEVVLKFTTVADGNEASSFTVKRGGATVGRGSCNDICIPNDSCMGESEHASIVWREGAFHVEDRGLPYGASVRIGTGRGVRDWPLDQGAMFSAGNSVFHTTEIDEDKGMLLEIVAGPLKGQKRRVQKDGANIGRATESTIRY 429
LSEV+LKFTTVADGNEASSFTVKR GATVGRGSCNDICIPNDSCMGESEHASIVWREGAFHVEDRGLPYGASVRIGTGRGVRDWPLDQGAMFSAGNSVFHTTEIDEDKGMLLEIVAGPLKGQKRRVQKDGANIGRATESTIR+
Sbjct: 324 LSEVILKFTTVADGNEASSFTVKREGATVGRGSCNDICIPNDSCMGESEHASIVWREGAFHVEDRGLPYGASVRIGTGRGVRDWPLDQGAMFSAGNSVFHTTEIDEDKGMLLEIVAGPLKGQKRRVQKDGANIGRATESTIRH 466
BLAST of mRNA_E-fasciculatus_F_contig16070.4153.1 vs. uniprot
Match: A0A7S0XEJ1_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XEJ1_9STRA) HSP 1 Score: 134 bits (336), Expect = 8.270e-34 Identity = 71/143 (49.65%), Postives = 100/143 (69.93%), Query Frame = 1
Query: 1 LSEVVLKFTTVADG-NEASSFTVKRGGATVGRGSCNDICIPNDSCMGESEHASIVWREGAFHVEDRGLPYGASVRIGTGRGVR-DWPLDQGAMFSAGNSVFHTTEIDEDKGMLLEIVAGPLKGQKRRVQKDGANIGRATESTI 423
L+++VLKFTTV++ NEA SFTV GA +G GS N+I IP+D + + HA+I + +G+F++ D G AS+RIG G G R W L+ A FSAGNSVF + IDED ++L+++ GPLK +KR V K GA+ GR++E+TI
Sbjct: 90 LNKIVLKFTTVSESCNEAPSFTVSTKGANIGSGSTNEIYIPSDLRLNKDAHATINYSKGSFYICDNGYDNPASIRIGVGTGHRMTWYLENNARFSAGNSVFCSEGIDEDGNLVLKVLEGPLKNEKRVVTKRGASFGRSSENTI 232
BLAST of mRNA_E-fasciculatus_F_contig16070.4153.1 vs. uniprot
Match: A0A7R9U1S5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1S5_9STRA) HSP 1 Score: 120 bits (300), Expect = 4.310e-32 Identity = 56/118 (47.46%), Postives = 85/118 (72.03%), Query Frame = 1
Query: 76 GATVGRGSCNDICIPNDSCMGESEHASIVWREG--AFHVEDRGLPYGASVRIGTGRGVRDWPLDQGAMFSAGNSVFHTTEIDEDKGMLLEIVAGPLKGQKRRVQKDGANIGRATESTI 423
GA++GRG N++ +P D+ + +HA IV++ AF+++D GL +GA+VRI G G+R W L + A+FSAGNS F E D D G+L+E+ AGPLKG++RRV + GA++GRAT++ +
Sbjct: 2 GASIGRGPANEVAVPTDTTLEADKHAMIVYKHDRKAFYLKDMGLEHGAAVRIEAGTGLRQWRLSENALFSAGNSSFKVVESD-DTGVLIEVGAGPLKGERRRVTQKGASLGRATDNVL 118
BLAST of mRNA_E-fasciculatus_F_contig16070.4153.1 vs. uniprot
Match: A0A7S1UBQ7_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UBQ7_9STRA) HSP 1 Score: 125 bits (315), Expect = 2.880e-31 Identity = 63/137 (45.99%), Postives = 91/137 (66.42%), Query Frame = 1
Query: 1 LSEVVLKFTTVADGNEASSFTVKRGGATVGRGSCNDICIPNDSCMGESEHASIVWREG--AFHVEDRGLPYGASVRIGTGRGVRDWPLDQGAMFSAGNSVFHTTEIDEDKGMLLEIVAGPLKGQKRRVQKDGANIGR 405
L E+VLKFTT+++GNEA +F V GGA++GR N++ +P D+ + HA I +R AF++ D G +GA++RI G G+R W L + A+FSAGNS F D +LLE+ +GPLKG++RRV + GA +GR
Sbjct: 168 LEEIVLKFTTLSEGNEAPAFLVGMGGASIGRDPTNEVSVPTDATLEPERHAVIEYRADRQAFYLRDMGHDHGAAIRIEAGSGLRQWRLQENAVFSAGNSSFKVVTCDASS-VLLEVGSGPLKGERRRVGEKGATLGR 303
BLAST of mRNA_E-fasciculatus_F_contig16070.4153.1 vs. uniprot
Match: A0A7S1XX31_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XX31_9STRA) HSP 1 Score: 125 bits (315), Expect = 9.230e-31 Identity = 63/137 (45.99%), Postives = 91/137 (66.42%), Query Frame = 1
Query: 1 LSEVVLKFTTVADGNEASSFTVKRGGATVGRGSCNDICIPNDSCMGESEHASIVWREG--AFHVEDRGLPYGASVRIGTGRGVRDWPLDQGAMFSAGNSVFHTTEIDEDKGMLLEIVAGPLKGQKRRVQKDGANIGR 405
L E+VLKFTT+++GNEA +F V GGA++GR N++ +P D+ + HA I +R AF++ D G +GA++RI G G+R W L + A+FSAGNS F D +LLE+ +GPLKG++RRV + GA +GR
Sbjct: 168 LEEIVLKFTTLSEGNEAPAFLVGMGGASIGRDPTNEVSVPTDATLEPERHAVIEYRADRQAFYLRDMGHDHGAAIRIEAGSGLRQWRLQENAVFSAGNSSFKVVTCDASS-VLLEVGSGPLKGERRRVGEKGATLGR 303
BLAST of mRNA_E-fasciculatus_F_contig16070.4153.1 vs. uniprot
Match: A0A7S2FV88_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FV88_9STRA) HSP 1 Score: 124 bits (312), Expect = 9.730e-31 Identity = 58/143 (40.56%), Postives = 90/143 (62.94%), Query Frame = 1
Query: 1 LSEVVLKFTTVADGNEASSFTVKRGGATVGRGSCNDICIPNDSCMGESEHASIVWREGAFHVEDRGLPYGASVRIGTGRGVRDWPLDQGAMFSAGNSVFHTTEID--EDKGMLLEIVAGPLKGQKRRVQKDGANIGRATESTI 423
+ +VLKFTT++DGNE +SF + G T+GRG N +C+P+D+ + + HA + + G F + D Y A+VR+G GR + WPL + A FS+GNS+F +++ + L + GP KG+ V KDGA +GRAT++T+
Sbjct: 1 VDRLVLKFTTLSDGNEKASFCLDARGGTIGRGLENHVCVPSDTTLAKLRHACVEYSNGEFQLVDTSSDYHAAVRVGVGRAAQAWPLTKTAAFSSGNSIFEVVDVELHPTPAVSLAVRTGPRKGETLVVGKDGATLGRATDNTV 143
BLAST of mRNA_E-fasciculatus_F_contig16070.4153.1 vs. uniprot
Match: A0A7S3YCX7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YCX7_HETAK) HSP 1 Score: 80.9 bits (198), Expect = 2.740e-16 Identity = 41/88 (46.59%), Postives = 60/88 (68.18%), Query Frame = 1
Query: 169 EGAFHVEDRGLPYGASVRIGTGRGVRDWPLDQGAMFSAGNSVF--HTTEIDEDKGML-LEIVAGPLKGQKRRVQKDGANIGRATESTI 423
E FH+ D G P GA+V+IG G R+WPL + FSAGNSV + +++ D+ M+ L I GPLKG++R++ K+GA +GRATE+ +
Sbjct: 3 EPGFHLHDLGQPLGAAVQIGKGIEDREWPLIVNSAFSAGNSVLVVESADLNGDEPMIWLRIEEGPLKGERRKITKEGAALGRATENAL 90 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16070.4153.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig16070.4153.1 >prot_E-fasciculatus_F_contig16070.4153.1 ID=prot_E-fasciculatus_F_contig16070.4153.1|Name=mRNA_E-fasciculatus_F_contig16070.4153.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=144bp LSEVVLKFTTVADGNEASSFTVKRGGATVGRGSCNDICIPNDSCMGESEHback to top mRNA from alignment at E-fasciculatus_F_contig16070:1829..2584+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig16070.4153.1 ID=mRNA_E-fasciculatus_F_contig16070.4153.1|Name=mRNA_E-fasciculatus_F_contig16070.4153.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=756bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16070:1829..2584+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16070:1829..2584+ >mRNA_E-fasciculatus_F_contig16070.4153.1 ID=mRNA_E-fasciculatus_F_contig16070.4153.1|Name=mRNA_E-fasciculatus_F_contig16070.4153.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=864bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16070:1829..2584+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |