mRNA_E-fasciculatus_F_contig16050.4142.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig16050.4142.1
Unique NamemRNA_E-fasciculatus_F_contig16050.4142.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig16050.4142.1 vs. uniprot
Match: D8LM80_ECTSI (Putative adenosylmethionine-8-amino-7-oxononanoate aminotransferase, aminoterminal part n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM80_ECTSI)

HSP 1 Score: 342 bits (877), Expect = 1.270e-110
Identity = 163/172 (94.77%), Postives = 166/172 (96.51%), Query Frame = 1
Query:    1 LEPWYDDDATARGFQTLLGGLSERCAAETARLAEMKARGHRALWWPFTQHDQLSEGKVNLLDSAYGDYYCVADVEEGEGEGETRVSHRALVDACASWWTQGAGHGNPGMALAVAEAAGRYGHVIFPGNIHAPALEVAERLVEGPGRGWASRVFFTDNGSTATEVAIKMGFRR 516
            LEPWYDDDATARGFQTLLGGLSER  AE +RLA MKARGHRALWWPFTQHDQLSEGKVNLLDSAYGDYYCVADV+E  G+GETRVSHRALVDACASWWTQGAGHGNPGMALAVAEAAGRYGHVIFPGNIHAPALEVAERLVEGPGRGWASRVFFTDNGSTATEVAIKMGFRR
Sbjct:  261 LEPWYDDDATARGFQTLLGGLSERRVAEASRLAGMKARGHRALWWPFTQHDQLSEGKVNLLDSAYGDYYCVADVDEEGGKGETRVSHRALVDACASWWTQGAGHGNPGMALAVAEAAGRYGHVIFPGNIHAPALEVAERLVEGPGRGWASRVFFTDNGSTATEVAIKMGFRR 432          
BLAST of mRNA_E-fasciculatus_F_contig16050.4142.1 vs. uniprot
Match: W7TUI3_9STRA (Bifunctional dethiobiotin synthetase adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TUI3_9STRA)

HSP 1 Score: 180 bits (456), Expect = 1.840e-49
Identity = 87/173 (50.29%), Postives = 114/173 (65.90%), Query Frame = 1
Query:    1 LEPWYDDDATARGFQTLLGGLSERCAAETARLAEMKARGHRALWWPFTQHDQLSEGKVNLLDSAYGDYYCVADVEEGEGEGETRVS-HRALVDACASWWTQGAGHGNPGMALAVAEAAGRYGHVIFPGNIHAPALEVAERLVEGPGRGWASRVFFTDNGSTATEVAIKMGFRR 516
            L+ WY        F  LL  L +R      RL +M  +  +  W+PFTQH  LS   ++++DSAYGD Y +      +G+ + RV   R L+DACASWWTQG GHG   +ALAV  AAGR+GHVIFPGN+H PAL +AE ++ GPG+GWASRVFF+DNGSTA E+A+KM  ++
Sbjct:  247 LDQWYHQHEHV--FHHLLDTLIDRERVRIQRLQKMTTQAAQVFWYPFTQHSGLSGTDLHVVDSAYGDNYTLISKSSEDGDAKERVPCSRTLIDACASWWTQGLGHGRVDVALAVGAAAGRFGHVIFPGNVHEPALRLAELMLAGPGQGWASRVFFSDNGSTAMEIAVKMALKK 417          
BLAST of mRNA_E-fasciculatus_F_contig16050.4142.1 vs. uniprot
Match: A0A4D9CW22_9STRA (Delta-aminolevulinic acid dehydratase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CW22_9STRA)

HSP 1 Score: 177 bits (448), Expect = 3.620e-48
Identity = 86/173 (49.71%), Postives = 113/173 (65.32%), Query Frame = 1
Query:    1 LEPWYDDDATARGFQTLLGGLSERCAAETARLAEMKARGHRALWWPFTQHDQLSEGKVNLLDSAYGDYYCVADVEEGEGEGETRVS-HRALVDACASWWTQGAGHGNPGMALAVAEAAGRYGHVIFPGNIHAPALEVAERLVEGPGRGWASRVFFTDNGSTATEVAIKMGFRR 516
            L+ WY        F  LL  L +R      RL +M  +  +  W+PFTQH  LS   ++++DSAYGD Y +      +G+ +  V   R L+DACASWWTQG GHG   +ALAV  AAGR+GHVIFPGN+H PAL +AE ++ GPG+GWASRVFF+DNGSTA E+A+KM  ++
Sbjct:  247 LDQWYHQHEHV--FHHLLDMLIDRERVRIQRLQKMTTQAAQVFWYPFTQHSGLSGTDLHVVDSAYGDNYTLIRKSSEDGDAKEHVPCSRTLIDACASWWTQGLGHGRVDVALAVGAAAGRFGHVIFPGNVHEPALRLAELMLAGPGQGWASRVFFSDNGSTAMEIAVKMALKK 417          
BLAST of mRNA_E-fasciculatus_F_contig16050.4142.1 vs. uniprot
Match: A0A836CC51_9STRA (Putative adenosylmethionine-8-amino-7-oxononanoate aminotransferase, aminoterminal part n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC51_9STRA)

HSP 1 Score: 170 bits (431), Expect = 4.790e-46
Identity = 96/188 (51.06%), Postives = 113/188 (60.11%), Query Frame = 1
Query:    1 LEPWYDDDATARGFQTLLGGLSERCAAETARLAEMKARGHRALWWPFTQHDQLSEGKVNLLDSAYGDYY--------CVADVEEGEGEGET-----RVSHRALV--DACASWWTQGAGHGNPGMALAVAEAAGRYGHVIFPGNIHAPALEVAERLVE-GPGRGWASRVFFTDNGSTATEVAIKMGFRR 516
            L  W+   A+AR F  ++  L  +   E A      AR  R LWWPFTQH  L    V  +DSAYG+Y+          A  E+G    +      R+S R L   DA ASWWTQG GHGNP + LAVAEAAGRYGH++FPG  HAPAL +AE LVE GPG GWA+R FFTD+GST  EVAIKM  RR
Sbjct:  280 LHAWHA--ASARDFDEVVAALRAQWRRELADALTHAARARRRLWWPFTQHATLPRDGVTNVDSAYGNYFHSLESAAGAAAAEEDGAQSNDAAAPAARMSGRILPLHDAPASWWTQGLGHGNPELGLAVAEAAGRYGHLLFPGTTHAPALRLAEELVERGPGAGWAARAFFTDDGSTGMEVAIKMALRR 465          
BLAST of mRNA_E-fasciculatus_F_contig16050.4142.1 vs. uniprot
Match: A0A2D4BSY9_PYTIN (Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSY9_PYTIN)

HSP 1 Score: 164 bits (416), Expect = 1.050e-44
Identity = 80/172 (46.51%), Postives = 109/172 (63.37%), Query Frame = 1
Query:    1 LEPWYDDDATARGFQTLLGGLSERCAAETARLAEMKARGHRALWWPFTQHDQLSEGKVNLLDSAYGDYYCVADVEEGEGEGETRVSHRALVDACASWWTQGAGHGNPGMALAVAEAAGRYGHVIFPGNIHAPALEVAERLVEGPGRGWASRVFFTDNGSTATEVAIKMGFRR 516
            L  WY +      F +++  L    +    RLAEM+ +  +  WWPFTQH Q   G ++L+DSA+GD +C  + +E         +   + DACASWWTQG GHGN  MA A+A  AGRYGHV+FP N H PA +++E+L+E  GR WASRV+F+D+GSTA EV +KM FR+
Sbjct:   84 LHEWYSEHDYV--FSSVVAQLKRFHSXRLQRLAEMRDKAEQVFWWPFTQHKQY--GGISLIDSAHGDEFCTFNSKE--------TALEPMFDACASWWTQGIGHGNAKMATALAYTAGRYGHVMFPENAHEPAFQLSEKLLETVGRNWASRVYFSDDGSTAVEVGLKMAFRK 243          
BLAST of mRNA_E-fasciculatus_F_contig16050.4142.1 vs. uniprot
Match: A0A024G6W2_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G6W2_9STRA)

HSP 1 Score: 164 bits (416), Expect = 4.480e-44
Identity = 81/172 (47.09%), Postives = 111/172 (64.53%), Query Frame = 1
Query:    1 LEPWYDDDATARGFQTLLGGLSERCAAETARLAEMKARGHRALWWPFTQHDQLSEGKVNLLDSAYGDYYCVADVEEGEGEGETRVSHRALVDACASWWTQGAGHGNPGMALAVAEAAGRYGHVIFPGNIHAPALEVAERLVEGPGRGWASRVFFTDNGSTATEVAIKMGFRR 516
            L  WY   +    F  ++  L+E  +    RL E++ +G    WWPFTQH Q+S  +  ++DSAYGD + V + E          S  ++ D+CASWWTQG GHGN  MA ++A AAGR+GHV+FP N+H PA  +++RL++  G GWASRVFF+DNGSTA EVA+KM FR+
Sbjct:  262 LTEWYALQSNL--FDEVVSTLNEFHSKRLKRLFELEDKGSSIFWWPFTQHKQISNKRPTVIDSAYGDTFQVWNKEH--------KSIDSMFDSCASWWTQGIGHGNAKMATSLAYAAGRFGHVMFPENVHEPAFRLSQRLLKSFGNGWASRVFFSDNGSTAVEVALKMAFRK 423          
BLAST of mRNA_E-fasciculatus_F_contig16050.4142.1 vs. uniprot
Match: A0A418B151_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B151_9STRA)

HSP 1 Score: 162 bits (410), Expect = 7.610e-44
Identity = 85/171 (49.71%), Postives = 109/171 (63.74%), Query Frame = 1
Query:    1 LEPWYDDDATARGFQTLLGGLSERCAAETARLAEMKARGHRALWWPFTQHDQLSEGKVNLLDSAYGDYYCVADVEEGEGEGETRVSHRALVDACASWWTQGAGHGNPGMALAVAEAAGRYGHVIFPGNIHAPALEVAERLVEGPGRGWASRVFFTDNGSTATEVAIKMGFR 513
            L  WY   A    F ++L  ++    A   RL  + ++    LWWPFTQH Q ++G V ++DSAYGD +   +         +R S   +VDACASWWTQG GHGNP  ALAVA  A RYGHV+FP N H PA++VA +L++  GR WASRVFF+D+GSTA EVA+KM FR
Sbjct:  107 LHDWYS--ANDESFASILDAITAYHHARVDRLHAISSQAQEILWWPFTQHKQ-NKG-VLVIDSAYGDSFATYNA--------SRNSLEPMVDACASWWTQGLGHGNPKAALAVATTAARYGHVMFPENAHEPAVQVAAKLLDTVGRNWASRVFFSDDGSTAVEVALKMAFR 265          
BLAST of mRNA_E-fasciculatus_F_contig16050.4142.1 vs. uniprot
Match: A0A0G4HTL3_9ALVE (Uncharacterized protein n=3 Tax=Eukaryota TaxID=2759 RepID=A0A0G4HTL3_9ALVE)

HSP 1 Score: 164 bits (414), Expect = 1.370e-43
Identity = 83/170 (48.82%), Postives = 99/170 (58.24%), Query Frame = 1
Query:    7 PWYDDDATARGFQTLLGGLSERCAAETARLAEMKARGHRALWWPFTQHDQLS-EGKVNLLDSAYGDYYCVADVEEGEGEGETRVSHRALVDACASWWTQGAGHGNPGMALAVAEAAGRYGHVIFPGNIHAPALEVAERLVEGPGRGWASRVFFTDNGSTATEVAIKMGFR 513
            PW+     +R F  L   +  R         E+  R     WWPFTQH  +  EG+V  +DSAYGD Y +AD       G  R+      D CASWWTQG GHGNP +AL+ A AAGRYGHVIFP   H PA ++ E L+ G G GWASRVFF+DNGSTA EV +KM  R
Sbjct:  281 PWFSLPHVSRSFAELKEAILARLMRRLLPSVELAERARAVTWWPFTQHRDIEREGRVLAMDSAYGDDYVLAD------SGGGRIVDYRRFDGCASWWTQGVGHGNPEIALSAAWAAGRYGHVIFPEIAHEPATQLCEELLAGVGAGWASRVFFSDNGSTAVEVGMKMAMR 444          
BLAST of mRNA_E-fasciculatus_F_contig16050.4142.1 vs. uniprot
Match: A0A024UR15_9STRA (Dethiobiotin synthase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UR15_9STRA)

HSP 1 Score: 162 bits (410), Expect = 2.720e-43
Identity = 85/171 (49.71%), Postives = 109/171 (63.74%), Query Frame = 1
Query:    1 LEPWYDDDATARGFQTLLGGLSERCAAETARLAEMKARGHRALWWPFTQHDQLSEGKVNLLDSAYGDYYCVADVEEGEGEGETRVSHRALVDACASWWTQGAGHGNPGMALAVAEAAGRYGHVIFPGNIHAPALEVAERLVEGPGRGWASRVFFTDNGSTATEVAIKMGFR 513
            L  WY   A    F ++L  ++    A   RL  + ++    LWWPFTQH Q ++G V ++DSAYGD +   +         +R S   +VDACASWWTQG GHGNP  ALAVA  A RYGHV+FP N H PA++VA +L++  GR WASRVFF+D+GSTA EVA+KM FR
Sbjct:  258 LHDWYS--ANDESFASILDAITAYHHARVDRLHAISSQAQEILWWPFTQHKQ-NKG-VLVIDSAYGDSFATYNA--------SRNSLEPMVDACASWWTQGLGHGNPKAALAVATTAARYGHVMFPENAHEPAVQVAAKLLDTVGRNWASRVFFSDDGSTAVEVALKMAFR 416          
BLAST of mRNA_E-fasciculatus_F_contig16050.4142.1 vs. uniprot
Match: M5G9F9_DACPD (Uncharacterized protein n=1 Tax=Dacryopinax primogenitus (strain DJM 731) TaxID=1858805 RepID=M5G9F9_DACPD)

HSP 1 Score: 162 bits (409), Expect = 4.890e-43
Identity = 83/172 (48.26%), Postives = 107/172 (62.21%), Query Frame = 1
Query:    1 LEPWYDDDATARGFQTLLGGLSERCAAETARLAEMKARGHRALWWPFTQHDQLSEGKVNLLDSAYGDYYCVADVEEGEGEGETRVSH-RALVDACASWWTQGAGHGNPGMALAVAEAAGRYGHVIFPGNIHAPALEVAERLVEGPGRGWASRVFFTDNGSTATEVAIKMGFR 513
            +E +Y   + +   Q LL  L ER  +  + L  M AR   ++WWPFTQH Q+ E +V  +DSA GD+Y V        +  T  S  + + D  ASWWTQ  GH +P +ALA A AA RYGHVIFP + HAPALE+AERL+ G G GWA RVF++D+GST  EVA+KM  R
Sbjct:  234 MEGYYS--SLSSSVQPLLSSLDERHQSRLSELDSMDARTRNSVWWPFTQHGQVREKEVMTIDSASGDFYSVYRSSSTSPQTPTDPSLLQQVYDGSASWWTQSLGHAHPSLALAAANAAARYGHVIFPSSTHAPALELAERLLRGEGEGWADRVFWSDDGSTGVEVALKMATR 403          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16050.4142.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM80_ECTSI1.270e-11094.77Putative adenosylmethionine-8-amino-7-oxononanoate... [more]
W7TUI3_9STRA1.840e-4950.29Bifunctional dethiobiotin synthetase adenosylmethi... [more]
A0A4D9CW22_9STRA3.620e-4849.71Delta-aminolevulinic acid dehydratase n=1 Tax=Nann... [more]
A0A836CC51_9STRA4.790e-4651.06Putative adenosylmethionine-8-amino-7-oxononanoate... [more]
A0A2D4BSY9_PYTIN1.050e-4446.51Adenosylmethionine-8-amino-7-oxononanoate aminotra... [more]
A0A024G6W2_9STRA4.480e-4447.09Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A418B151_9STRA7.610e-4449.71Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A0G4HTL3_9ALVE1.370e-4348.82Uncharacterized protein n=3 Tax=Eukaryota TaxID=27... [more]
A0A024UR15_9STRA2.720e-4349.71Dethiobiotin synthase n=1 Tax=Aphanomyces invadans... [more]
M5G9F9_DACPD4.890e-4348.26Uncharacterized protein n=1 Tax=Dacryopinax primog... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig16050contigE-fasciculatus_F_contig16050:94..1664 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score342.4
Seed ortholog evalue1.2e-91
Seed eggNOG ortholog2880.D8LM80
Preferred namebioDA
KEGG rclassRC00006,RC00868,RC00887
KEGG koko:K19562
KEGG ReactionR03182,R03231
KEGG Pathwayko00780,ko01100,map00780,map01100
KEGG ModuleM00123
GOsGO:0003674,GO:0003824,GO:0004015,GO:0004141,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0016874,GO:0016879,GO:0016882,GO:0017144,GO:0018130,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
EggNOG OGsCOG4992@1,KOG1401@2759
EC2.6.1.62,6.3.3.3
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons3
Model size516
Cds size516
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig16050.4142.1prot_E-fasciculatus_F_contig16050.4142.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig16050 94..1664 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928073.1529858-CDS-E-fasciculatus_F_contig16050:93..3391622928073.1529858-CDS-E-fasciculatus_F_contig16050:93..339Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16050 94..339 +
1695995812.1395292-CDS-E-fasciculatus_F_contig16050:93..3391695995812.1395292-CDS-E-fasciculatus_F_contig16050:93..339Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16050 94..339 +
1622928073.1642814-CDS-E-fasciculatus_F_contig16050:793..9521622928073.1642814-CDS-E-fasciculatus_F_contig16050:793..952Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16050 794..952 +
1695995812.1522942-CDS-E-fasciculatus_F_contig16050:793..9521695995812.1522942-CDS-E-fasciculatus_F_contig16050:793..952Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16050 794..952 +
1622928073.1777077-CDS-E-fasciculatus_F_contig16050:1553..16641622928073.1777077-CDS-E-fasciculatus_F_contig16050:1553..1664Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16050 1554..1664 +
1695995812.1605015-CDS-E-fasciculatus_F_contig16050:1553..16641695995812.1605015-CDS-E-fasciculatus_F_contig16050:1553..1664Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16050 1554..1664 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig16050.4142.1

>prot_E-fasciculatus_F_contig16050.4142.1 ID=prot_E-fasciculatus_F_contig16050.4142.1|Name=mRNA_E-fasciculatus_F_contig16050.4142.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=172bp
LEPWYDDDATARGFQTLLGGLSERCAAETARLAEMKARGHRALWWPFTQH
DQLSEGKVNLLDSAYGDYYCVADVEEGEGEGETRVSHRALVDACASWWTQ
GAGHGNPGMALAVAEAAGRYGHVIFPGNIHAPALEVAERLVEGPGRGWAS
RVFFTDNGSTATEVAIKMGFRR
back to top

mRNA from alignment at E-fasciculatus_F_contig16050:94..1664+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig16050.4142.1 ID=mRNA_E-fasciculatus_F_contig16050.4142.1|Name=mRNA_E-fasciculatus_F_contig16050.4142.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1571bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16050:94..1664+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CTCGAGCCCTGGTACGACGACGACGCCACCGCACGGGGTTTCCAGACCCT GCTCGGCGGCCTGTCGGAGCGGTGTGCCGCTGAGACGGCCCGCCTCGCCG AGATGAAGGCTCGCGGGCACAGGGCCCTGTGGTGGCCGTTCACCCAGCAC GACCAGCTGAGCGAGGGCAAGGTTAACCTGCTTGACTCGGCGTACGGGGA CTACTATTGCGTGGCGGATGTCGAAGAGGGGGAGGGCGAGGGGGAGGTGA GACGAAACTCAGAAGAGAAAGAAGGCCATTCACCTTACCGGTACTTTCCG AGTCGCGTGAGGGTGGGTAGGGTGGTATGGGGTGGTGCGGGCGAGTTTGC GCCGCCGGGGTGAGTGTGTTTGCTTTGTGTGCGTGTTTTCGCTCGCTTTC GGCATGACATGACAGAATACCTCTTGCAGCCAACTTACTGCTGTTTAGCT TTCGGTCCTTCGCTCATAGACAAAATATTGTCGGCGGGACATGTCGACCC CACTCTTCCCCCAAGTTTCTCCCCCGATGCGTTGCCCGCGAAAGGTTACC ACGGTGCCACAGTGCTCTTGATTTGTCGCGCGTTGTCGCCGTGGAGCACA CCACATGTTTGGTTGTGCTCCATGCCGTTGCTTGTGACAGCATTGATGGA TGGTACCAGTAACTCCACCACTGCTGTGTCGATGCTTGCACCTGACGTAG ACTCGAGTGTCGCACCGTGCGCTGGTGGATGCGTGTGCGTCGTGGTGGAC CCAAGGGGCTGGTCATGGAAACCCGGGGATGGCGTTGGCGGTTGCCGAGG CCGCCGGCCGATACGGGCACGTCATCTTCCCGGGAAACATACACGCGCCG GCTCTGGAGGTGACTTTGTGTTTTGGTTTGTCGGCCGCATGGAGCCAGCA GTGTTGTTGTTGTTCTTGTTGTTGTTGTTGTTGTTGTTATCTTCACATTA AAAACCGTTCCGATGTCTCTACCTGGTACCTTCATCTGTCCGTACTGATC GAACACTTGGCCGAGCGATTCCCGTGTTCACAGGCTAGCTTTCCTAGAAA AGGTATACTCAAATAAATGGATACGAAGGGTCTGCAACCCGTGTGTGCGT CCGAAACAGTTAGTGTTGGTGTCTAGAAGTCAACAGGTTCGAGGTGTTTG ATTCTGATGGGTAGACGACAAGAAGGAGCACGAGAACGAACAGGCAGGTC TCACCATCTCTCGTGCGTCCTTTTTTCTTTTATATGCTGATGATGAAGGA CGCTTCTTCTTTTCTGTCGTATAGTTGTCGCGCCTGATCAGGTCTTGCAC GACGGTAACATCGTCAGGTCCTTGTTATTTCCCCGCGTTGGAAGCCTGTT TGTGTACAGAACCCCCCTTTTCAACACCTCCTACAAAACCCCCTCCTCTA ACGCCTCCTTATTGTTCTTCCTTGTACCCGGTGGACGGTTGTTTCACGTA CGTATGGCAGGTCGCGGAGAGGCTGGTGGAAGGGCCGGGTAGGGGCTGGG CGTCGCGGGTGTTCTTCACGGACAACGGATCCACCGCAACCGAGGTGGCC ATCAAGATGGGCTTCAGGCGA
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16050:94..1664+

>mRNA_E-fasciculatus_F_contig16050.4142.1 ID=mRNA_E-fasciculatus_F_contig16050.4142.1|Name=mRNA_E-fasciculatus_F_contig16050.4142.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1032bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16050:94..1664+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CTCGAGCCCTGGTACGACGACGACGCCACCGCACGGGGTTTCCAGACCCT
GCTCGGCGGCCTGTCGGAGCGGTGTGCCGCTGAGACGGCCCGCCTCGCCG
AGATGAAGGCTCGCGGGCACAGGGCCCTGTGGTGGCCGTTCACCCAGCAC
GACCAGCTGAGCGAGGGCAAGGTTAACCTGCTTGACTCGGCGTACGGGGA
CTACTATTGCGTGGCGGATGTCGAAGAGGGGGAGGGCGAGGGGGAGCTCG
AGCCCTGGTACGACGACGACGCCACCGCACGGGGTTTCCAGACCCTGCTC
GGCGGCCTGTCGGAGCGGTGTGCCGCTGAGACGGCCCGCCTCGCCGAGAT
GAAGGCTCGCGGGCACAGGGCCCTGTGGTGGCCGTTCACCCAGCACGACC
AGCTGAGCGAGGGCAAGGTTAACCTGCTTGACTCGGCGTACGGGGACTAC
TATTGCGTGGCGGATGTCGAAGAGGGGGAGGGCGAGGGGGAGACTCGAGT
GTCGCACCGTGCGCTGGTGGATGCGTGTGCGTCGTGGTGGACCCAAGGGG
CTGGTCATGGAAACCCGGGGATGGCGTTGGCGGTTGCCGAGGCCGCCGGC
CGATACGGGCACGTCATCTTCCCGGGAAACATACACGCGCCGGCTCTGGA
GACTCGAGTGTCGCACCGTGCGCTGGTGGATGCGTGTGCGTCGTGGTGGA
CCCAAGGGGCTGGTCATGGAAACCCGGGGATGGCGTTGGCGGTTGCCGAG
GCCGCCGGCCGATACGGGCACGTCATCTTCCCGGGAAACATACACGCGCC
GGCTCTGGAGGTCGCGGAGAGGCTGGTGGAAGGGCCGGGTAGGGGCTGGG
CGTCGCGGGTGTTCTTCACGGACAACGGATCCACCGCAACCGAGGTGGCC
ATCAAGATGGGCTTCAGGCGAGTCGCGGAGAGGCTGGTGGAAGGGCCGGG
TAGGGGCTGGGCGTCGCGGGTGTTCTTCACGGACAACGGATCCACCGCAA
CCGAGGTGGCCATCAAGATGGGCTTCAGGCGA
back to top