mRNA_E-fasciculatus_F_contig16038.4136.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig16038.4136.1
Unique NamemRNA_E-fasciculatus_F_contig16038.4136.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig16038.4136.1 vs. uniprot
Match: A0A6H5L4N4_9PHAE (RNA cytidine acetyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4N4_9PHAE)

HSP 1 Score: 293 bits (750), Expect = 4.650e-90
Identity = 157/161 (97.52%), Postives = 158/161 (98.14%), Query Frame = 1 
Query:    1 RWCYYKDTERVLGQTFGVLVLQDFEALTPNLLARTIETVEGGGLVILLLKTVTSLKQLYAMSMDVHSRFRTESSGDVVGRFNERFMLTLGDCKSCLVCDDELNVLPLSSHARDIVPLPPVDEDAETTEAXXXXXXXXSLEGTPPVGPLVAGAKTLDQVHTV 483
            RWCYYKDTERVLGQTFGVLVLQDFEALTPNLLARTIETVEGGGLVILLLKTVTSLKQLYAMSMDVHSRFRTESSGDVVGRFNERFMLTLGDCKSCLVCDDELNVLPLSSHARDIVPLPPVDEDAETTEAXXXXXXXXSLEGTPPVGPLVAGAKTLDQ   +
Sbjct:   33 RWCYYKDTERVLGQTFGVLVLQDFEALTPNLLARTIETVEGGGLVILLLKTVTSLKQLYAMSMDVHSRFRTESSGDVVGRFNERFMLTLGDCKSCLVCDDELNVLPLSSHARDIVPLPPVDEDAETTEAXXXXXXXXSLEGTPPVGPLVAGAKTLDQARAL 193
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BLAST of mRNA_E-fasciculatus_F_contig16038.4136.1 vs. uniprot
Match: UPI00052892DA (N-acetyltransferase 10-like n=2 Tax=Neognathae TaxID=8825 RepID=UPI00052892DA)

HSP 1 Score: 203 bits (516), Expect = 2.650e-63
Identity = 100/162 (61.73%), Postives = 126/162 (77.78%), Query Frame = 1 
Query:    1 RWCYYKDTERVLGQTFGVLVLQDFEALTPNLLARTIETVEGGGLVILLLKTVTSLKQLYAMSMDVHSRFRTESSGDVVGRFNERFMLTLGDCKSCLVCDDELNVLPLSSHARDIVPLPPVD-EDAETTEAXXXXXXXXSLEGTPPVGPLVAGAKTLDQVHTV 483
            R+CYY +T ++LG TFG+ VLQDFEALTPNLLART+ETVEGGG+V++LL+T+ SLKQLY M+MDVHSR+RTE+  DVVGRFNERF+L+L  CK+C+V DD+LN+LP+SSH  +I P+PP   ED+   +         SL+ T PVG LV G KTLDQV  V
Sbjct:   67 RYCYYNETHKILGNTFGMCVLQDFEALTPNLLARTVETVEGGGIVVILLRTMNSLKQLYTMTMDVHSRYRTEAHQDVVGRFNERFILSLASCKNCIVIDDQLNILPISSHVANITPVPPQSQEDSLRPQDLELKELKDSLQDTQPVGVLVDGCKTLDQVGVV 228
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BLAST of mRNA_E-fasciculatus_F_contig16038.4136.1 vs. uniprot
Match: A0A835Z409_9STRA (RNA cytidine acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z409_9STRA)

HSP 1 Score: 219 bits (558), Expect = 2.680e-63
Identity = 110/161 (68.32%), Postives = 125/161 (77.64%), Query Frame = 1 
Query:    1 RWCYYKDTERVLGQTFGVLVLQDFEALTPNLLARTIETVEGGGLVILLLKTVTSLKQLYAMSMDVHSRFRTESSGDVVGRFNERFMLTLGDCKSCLVCDDELNVLPLSSHARDIVPLPPVDEDAETTEAXXXXXXXXSLEGTPPVGPLVAGAKTLDQVHTV 483
            RW YY+DT +VLGQTFG+ VLQDFEALTPNLLARTIETVEGGG+V+LLLKTV SL+QLY ++MDVH RFRTE+ GDVV RFNERFML+L DC +CL CDDELNVLPLSS  R +  LP       T E         SLEGTPP+GPLV+GAKTLDQ   +
Sbjct:  105 RWTYYRDTAKVLGQTFGMCVLQDFEALTPNLLARTIETVEGGGVVVLLLKTVASLQQLYTLTMDVHDRFRTEAHGDVVARFNERFMLSLADCGACLACDDELNVLPLSSRMRRVEALPAAAGAEPTQEQAELAELKASLEGTPPIGPLVSGAKTLDQARAL 265
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BLAST of mRNA_E-fasciculatus_F_contig16038.4136.1 vs. uniprot
Match: A0A3Q2ZUE5_KRYMA (N-acetyltransferase 10 n=1 Tax=Kryptolebias marmoratus TaxID=37003 RepID=A0A3Q2ZUE5_KRYMA)

HSP 1 Score: 201 bits (512), Expect = 4.330e-62
Identity = 99/159 (62.26%), Postives = 124/159 (77.99%), Query Frame = 1 
Query:    1 RWCYYKDTERVLGQTFGVLVLQDFEALTPNLLARTIETVEGGGLVILLLKTVTSLKQLYAMSMDVHSRFRTESSGDVVGRFNERFMLTLGDCKSCLVCDDELNVLPLSSHARDIVPLPPVDEDAETTEAXXXXXXXXSLEGTPPVGPLVAGAKTLDQVH 477
            R+CYY +T ++LG TFG+ VLQDFEALTPNLLARTIETVEGGGLV+LLL+T+ SLKQLY M+MDVHSR+RTE+  DVVGRFNERF+L+L  CK+C+V DD+LN+LP+SSH  +I P+PP  ED  +           SL+ T PVG LV   +T+DQV+
Sbjct:  105 RYCYYNETHKILGNTFGMCVLQDFEALTPNLLARTIETVEGGGLVVLLLRTMNSLKQLYTMTMDVHSRYRTEAHQDVVGRFNERFILSLSSCKNCVVIDDQLNILPISSHMANIKPVPPKTEDGLSPRDQELKDLKESLQDTQPVGVLVDCCRTMDQVN 263
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BLAST of mRNA_E-fasciculatus_F_contig16038.4136.1 vs. uniprot
Match: UPI0005152A54 (N-acetyltransferase 10-like n=1 Tax=Phalacrocorax carbo TaxID=9209 RepID=UPI0005152A54)

HSP 1 Score: 201 bits (510), Expect = 1.470e-61
Identity = 99/162 (61.11%), Postives = 124/162 (76.54%), Query Frame = 1 
Query:    1 RWCYYKDTERVLGQTFGVLVLQDFEALTPNLLARTIETVEGGGLVILLLKTVTSLKQLYAMSMDVHSRFRTESSGDVVGRFNERFMLTLGDCKSCLVCDDELNVLPLSSHARDIVPLPPVD-EDAETTEAXXXXXXXXSLEGTPPVGPLVAGAKTLDQVHTV 483
            R+CYY +T ++LG TFG+ VLQDFEALTPNLLART+ETVEGGG+V++LL+T+ SLKQLY M+MDVHSR+RTE+  DVVGRFNERF+L+L  CK+C+V DD+LN+LP+SSH  +I P+PP   ED    +         SL+ T PVG LV G KTLDQ   V
Sbjct:   67 RYCYYNETHKILGNTFGMCVLQDFEALTPNLLARTVETVEGGGIVVILLRTMNSLKQLYTMTMDVHSRYRTEAHQDVVGRFNERFILSLASCKNCIVIDDQLNILPISSHVANITPVPPQSQEDNIRPQDLELKELKESLQDTQPVGVLVDGCKTLDQAKAV 228
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BLAST of mRNA_E-fasciculatus_F_contig16038.4136.1 vs. uniprot
Match: A0A665U3G6_ECHNA (N-acetyltransferase 10 n=1 Tax=Echeneis naucrates TaxID=173247 RepID=A0A665U3G6_ECHNA)

HSP 1 Score: 198 bits (504), Expect = 7.440e-61
Identity = 97/160 (60.62%), Postives = 124/160 (77.50%), Query Frame = 1 
Query:    1 RWCYYKDTERVLGQTFGVLVLQDFEALTPNLLARTIETVEGGGLVILLLKTVTSLKQLYAMSMDVHSRFRTESSGDVVGRFNERFMLTLGDCKSCLVCDDELNVLPLSSHARDIVPLPP-VDEDAETTEAXXXXXXXXSLEGTPPVGPLVAGAKTLDQVH 477
            R+CYY +T ++LG T+G+ VLQDFEALTPNLLARTIETVEGGG+V++LL+T+ SLKQLY M+MDVHSR+RTE+  DVVGRFNERF+L+L  CK+C+V DD+LN+LP+SSH  +I P+PP   ED  + +         SL+ T PVG LV   +TLDQV 
Sbjct:  105 RYCYYNETHKILGNTYGMCVLQDFEALTPNLLARTIETVEGGGIVVILLRTMNSLKQLYTMTMDVHSRYRTEAHQDVVGRFNERFILSLASCKTCVVIDDQLNILPISSHMANIKPVPPKTQEDGLSPQEQELRDLKESLQDTQPVGALVDSCRTLDQVR 264
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BLAST of mRNA_E-fasciculatus_F_contig16038.4136.1 vs. uniprot
Match: A0A8C9X124_SANLU (N-acetyltransferase 10 n=1 Tax=Sander lucioperca TaxID=283035 RepID=A0A8C9X124_SANLU)

HSP 1 Score: 198 bits (503), Expect = 1.090e-60
Identity = 94/160 (58.75%), Postives = 123/160 (76.88%), Query Frame = 1 
Query:    1 RWCYYKDTERVLGQTFGVLVLQDFEALTPNLLARTIETVEGGGLVILLLKTVTSLKQLYAMSMDVHSRFRTESSGDVVGRFNERFMLTLGDCKSCLVCDDELNVLPLSSHARDIVPLPPVDEDAETTEAXXXXXXXXSLEGTPPVGPLVAGAKTLDQVHT 480
            R+CYY +T ++LG T+G+ VLQDFEALTPNLLART+ETVEGGG+V++LL+T+ SLKQLY M+MDVHSR+RTE+  DVVGRFNERF+L+L  CK+C+V DD+LN+LP+SSH  +I P+PP  +D  +           SL+ T PVG LV   +T+DQ  T
Sbjct:  105 RYCYYNETHKILGNTYGMCVLQDFEALTPNLLARTVETVEGGGIVVILLRTMNSLKQLYTMTMDVHSRYRTEAHQDVVGRFNERFILSLASCKNCVVIDDQLNILPISSHMANITPVPPKTQDGLSPREQELKDLKESLQDTQPVGVLVDSCRTMDQRFT 264
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BLAST of mRNA_E-fasciculatus_F_contig16038.4136.1 vs. uniprot
Match: A0A1V9YCU8_9STRA (RNA cytidine acetyltransferase n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YCU8_9STRA)

HSP 1 Score: 211 bits (538), Expect = 1.400e-60
Identity = 106/161 (65.84%), Postives = 129/161 (80.12%), Query Frame = 1 
Query:    1 RWCYYKDTERVLGQTFGVLVLQDFEALTPNLLARTIETVEGGGLVILLLKTVTSLKQLYAMSMDVHSRFRTESSGDVVGRFNERFMLTLGDCKSCLVCDDELNVLPLSSHARDIVPLPPVDEDAETTEAXXXXXXXXSLEGTPPVGPLVAGAKTLDQVHTV 483
            RWCYYK+T+++LGQT+G+ VLQDFEA+TPN+LARTIETVEGGG+V+LLL+T+TSLK+LY MSMDVH+RFRTE+  DVV RFNERF+L+L +C  CLV DDELNVLP+S HAR+I  LPPV ED  T +         SL+ T PVG LVA AKTLDQ   +
Sbjct:  103 RWCYYKETQKILGQTYGMCVLQDFEAITPNILARTIETVEGGGVVVLLLRTMTSLKKLYTMSMDVHARFRTEAHQDVVARFNERFILSLSNCDKCLVLDDELNVLPISKHARNIEALPPV-EDELTPDQRELADLKESLKDTQPVGSLVAEAKTLDQAKAI 262
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BLAST of mRNA_E-fasciculatus_F_contig16038.4136.1 vs. uniprot
Match: A0A024U7Z3_9STRA (RNA cytidine acetyltransferase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U7Z3_9STRA)

HSP 1 Score: 207 bits (527), Expect = 1.540e-60
Identity = 103/161 (63.98%), Postives = 127/161 (78.88%), Query Frame = 1 
Query:    1 RWCYYKDTERVLGQTFGVLVLQDFEALTPNLLARTIETVEGGGLVILLLKTVTSLKQLYAMSMDVHSRFRTESSGDVVGRFNERFMLTLGDCKSCLVCDDELNVLPLSSHARDIVPLPPVDEDAETTEAXXXXXXXXSLEGTPPVGPLVAGAKTLDQVHTV 483
            RWCYYK+T+++LGQTFG+ VLQDFEA+TPN+LARTIETVEGGG+V+LLL+T+TSLK+LY M+MDVH+RFRTE+  DVV RFNERF+L+L  C  CLV DDELNVLP+S HAR+I  LPPV+ D  T           SL+ T PVG LVA ++T+DQ   V
Sbjct:  103 RWCYYKETQKILGQTFGMCVLQDFEAVTPNILARTIETVEGGGVVVLLLRTMTSLKKLYTMTMDVHARFRTEAHQDVVARFNERFILSLSSCDKCLVLDDELNVLPISKHARNIEALPPVENDV-TPAQQELLDLKESLKDTQPVGALVAESRTMDQAKAV 262
[Close]
BLAST of mRNA_E-fasciculatus_F_contig16038.4136.1 vs. uniprot
Match: A0A8C0WU07_CASCN (RNA cytidine acetyltransferase-like n=1 Tax=Castor canadensis TaxID=51338 RepID=A0A8C0WU07_CASCN)

HSP 1 Score: 197 bits (501), Expect = 2.910e-60
Identity = 100/160 (62.50%), Postives = 123/160 (76.88%), Query Frame = 1 
Query:    1 RWCYYKDTERVLGQTFGVLVLQDFEALTPNLLARTIETVEGGGLVILLLKTVTSLKQLYAMSMDVHSRFRTESSGDVVGRFNERFMLTLGDCKSCLVCDDELNVLPLSSHARDIVPLPP-VDEDAETTEAXXXXXXXXSLEGTPPVGPLVAGAKTLDQVH 477
            R+CYY +T ++LG TFG+ VLQDFEALTPNLLART+ETVEGGGLV++LL+T+ SLKQLY M+MDVHSR+RTE+  DVVGRFNERF+L+L  CK CLV DD+LN+LP+SSH  +I  LPP V ++  +  A        SL+ T PVG LV   KTLDQV 
Sbjct:  103 RYCYYNETHKILGNTFGMCVLQDFEALTPNLLARTVETVEGGGLVVILLRTMNSLKQLYTMTMDVHSRYRTEAHQDVVGRFNERFILSLASCKKCLVIDDQLNILPISSHMANIEALPPQVPDENLSPSALELQELTESLQDTQPVGVLVDCCKTLDQVR 262
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16038.4136.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4N4_9PHAE4.650e-9097.52RNA cytidine acetyltransferase n=2 Tax=Ectocarpus ... [more]
UPI00052892DA2.650e-6361.73N-acetyltransferase 10-like n=2 Tax=Neognathae Tax... [more]
A0A835Z409_9STRA2.680e-6368.32RNA cytidine acetyltransferase n=1 Tax=Tribonema m... [more]
A0A3Q2ZUE5_KRYMA4.330e-6262.26N-acetyltransferase 10 n=1 Tax=Kryptolebias marmor... [more]
UPI0005152A541.470e-6161.11N-acetyltransferase 10-like n=1 Tax=Phalacrocorax ... [more]
A0A665U3G6_ECHNA7.440e-6160.63N-acetyltransferase 10 n=1 Tax=Echeneis naucrates ... [more]
A0A8C9X124_SANLU1.090e-6058.75N-acetyltransferase 10 n=1 Tax=Sander lucioperca T... [more]
A0A1V9YCU8_9STRA1.400e-6065.84RNA cytidine acetyltransferase n=4 Tax=Saprolegnia... [more]
A0A024U7Z3_9STRA1.540e-6063.98RNA cytidine acetyltransferase n=1 Tax=Aphanomyces... [more]
A0A8C0WU07_CASCN2.910e-6062.50RNA cytidine acetyltransferase-like n=1 Tax=Castor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig16038contigE-fasciculatus_F_contig16038:236..2326 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score298.1
Seed ortholog evalue2.4e-78
Seed eggNOG ortholog2880.D7FZ70
Preferred nameNAT10
KEGG koko:K14521
KEGG Pathwayko03008,map03008
GOsGO:0000049,GO:0000154,GO:0000166,GO:0002097,GO:0002101,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005697,GO:0005730,GO:0006139,GO:0006325,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006464,GO:0006473,GO:0006475,GO:0006725,GO:0006807,GO:0006996,GO:0008033,GO:0008080,GO:0008144,GO:0008150,GO:0008152,GO:0009451,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010556,GO:0010558,GO:0010605,GO:0010639,GO:0016043,GO:0016070,GO:0016072,GO:0016407,GO:0016410,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0017076,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0022613,GO:0030490,GO:0030496,GO:0030554,GO:0030684,GO:0030686,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032204,GO:0032205,GO:0032210,GO:0032211,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033043,GO:0033044,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0036211,GO:0042254,GO:0042274,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043543,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051276,GO:0051391,GO:0051392,GO:0060255,GO:0065007,GO:0065008,GO:0070013,GO:0070182,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1904356,GO:1904357,GO:1904812,GO:1990882,GO:1990883,GO:1990884,GO:1990904,GO:2000112,GO:2000113,GO:2000278,GO:2000279,GO:2001251
EggNOG free text desc.tRNA N-acetyltransferase activity
EggNOG OGsCOG1444@1,KOG2036@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009
Hectar predicted targeting categoryother localisation
Exons4
Model size483
Cds size483
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig16038.4136.1prot_E-fasciculatus_F_contig16038.4136.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig16038 236..2326 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928072.2343845-CDS-E-fasciculatus_F_contig16038:235..3101622928072.2343845-CDS-E-fasciculatus_F_contig16038:235..310Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16038 236..310 +
1695995811.756291-CDS-E-fasciculatus_F_contig16038:235..3101695995811.756291-CDS-E-fasciculatus_F_contig16038:235..310Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16038 236..310 +
1622928072.2521095-CDS-E-fasciculatus_F_contig16038:924..10521622928072.2521095-CDS-E-fasciculatus_F_contig16038:924..1052Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16038 925..1052 +
1695995811.7781658-CDS-E-fasciculatus_F_contig16038:924..10521695995811.7781658-CDS-E-fasciculatus_F_contig16038:924..1052Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16038 925..1052 +
1622928072.2680922-CDS-E-fasciculatus_F_contig16038:1271..14321622928072.2680922-CDS-E-fasciculatus_F_contig16038:1271..1432Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16038 1272..1432 +
1695995811.7880597-CDS-E-fasciculatus_F_contig16038:1271..14321695995811.7880597-CDS-E-fasciculatus_F_contig16038:1271..1432Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16038 1272..1432 +
1622928072.2832475-CDS-E-fasciculatus_F_contig16038:2207..23261622928072.2832475-CDS-E-fasciculatus_F_contig16038:2207..2326Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16038 2208..2326 +
1695995811.7986662-CDS-E-fasciculatus_F_contig16038:2207..23261695995811.7986662-CDS-E-fasciculatus_F_contig16038:2207..2326Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16038 2208..2326 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig16038.4136.1

>prot_E-fasciculatus_F_contig16038.4136.1 ID=prot_E-fasciculatus_F_contig16038.4136.1|Name=mRNA_E-fasciculatus_F_contig16038.4136.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=161bp
RWCYYKDTERVLGQTFGVLVLQDFEALTPNLLARTIETVEGGGLVILLLK
TVTSLKQLYAMSMDVHSRFRTESSGDVVGRFNERFMLTLGDCKSCLVCDD
ELNVLPLSSHARDIVPLPPVDEDAETTEAKELRELKESLEGTPPVGPLVA
GAKTLDQVHTV
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mRNA from alignment at E-fasciculatus_F_contig16038:236..2326+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig16038.4136.1 ID=mRNA_E-fasciculatus_F_contig16038.4136.1|Name=mRNA_E-fasciculatus_F_contig16038.4136.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2091bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16038:236..2326+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGGTGGTGCTACTACAAGGACACGGAGAGGGTGCTGGGACAGACCTTCGG
CGTCCTGGTCCTGCAGGACTTCGAGGTGCGGGACTGACCAGCAAGCTTTG
GTGTGTGTTGGTTGCTACTCTTCTTGCGCGTTGTGTCTGTGTCGTGGCCA
AAGTGTGTGTGTTGTAGCTTTACTTGAGATGCTGTTGCTTTGCCTGAAAT
GTCATTTGCTGCTGTACCTGAAATGTCGTTTGTTGCTGTACCTGAGATGC
TGCTGTGCCTTCTTGTCGCTGCTTTGGGCTTTCGGCTGTGATGGGGCCTT
GTCGTTCATGTGTGACAAACCAACCAACCGCTGGCTGGCTGGCTGGCAGC
ACCTGGTGGTGTTTCGCGGTGCCTGCGATCTTCGGAACGATAGCGCGGTG
TCGTGTCGCACGTGGTGATGGTGGTGATAGGGGCGGTTTGTCCTGCAACT
CTGTTGCGTGGAATCGGGAGACGGGAGAAACAGTAGGGTGTGTCGTTTGA
CCATTTCTGCTTGTCCTTGTTTGTTTTTTTTCTAGTTGCCTGAGCCGTGA
TCGGTGGCACCCAGATGTGCCGGTAATCACCGTCAAGCCTTTGTCCCTGA
CGATTTGTTTTCGGCGGCGTTGTGTCCGTTCCGGGTTGTTGCTGCTGCTG
CTGTTGCTGTTGCTGCTGCTGCTGCTGCTGTATGTTCAGGCGTTGACGCC
CAATCTGCTGGCGAGGACAATCGAGACGGTGGAAGGAGGCGGCCTTGTCA
TCCTGCTGCTCAAGACCGTCACCAGCCTCAAGCAGCTCTACGCCATGTCC
ATGGACGTGCACTCCAGGTAAGGCTTGCTGAAGCCGCTTCTTTTTTCTCA
CCCCGTCAGGAACGGTTGGCCATCGGTGATCGGTTCTGTGGGGGCGATGC
TCCGTCCTCTTGAGGACGCTTCCCCCAACAACTAAAAGGCATGCAAAACA
TGGTACCCCCGTCCCCCCGTGTGTTGGTGACTGACCGTTCGCCACGCGGG
TGACAATCCCTTGCTGTCTGATTGGAACATTACTAGATTCCGCACGGAGA
GCTCCGGAGACGTGGTCGGCCGGTTCAACGAGCGCTTCATGCTCACGCTG
GGCGACTGCAAGAGCTGCCTCGTGTGCGACGACGAGCTTAACGTGCTCCC
TCTCTCGTCCCACGCGAGAGACATCGTGCCTCTTCCGCCCGTCGACGGTG
AGAACGCCGGGTGTTTTTCGTGCCCACCCGCGCTGCGACGGAAATCCTCC
TTTGCGGTTTTGACCCGTTTTGTCTGTCTCTGCGGGCCTCGATTGGAGTT
GTCTTGAGATGTTGACCAGTTTTTTGTCCCTGTCCTTCCATGGAAAGCCT
CGTGCGACCTTGACCCGTTCGTGTCTCTTCCCTCTCCTCGGATTTCTGGA
AAGGTTGACCTGTTTTCGTCTCCGCCCTCCTATGGAATCCTGGCGGTTTT
GACTCGCCTCTCCCCTCCTTGGTCTTTTTTTTTTTTCTTTTCTAACATTG
GGACACGAAAGAAAGCGGTGTCTGAATCGGTGTTTGATGATGTACTTTGT
GCTCACCCCTTGACCTAGACAGCATTCAGTGCACACAGCAGGTTTTCTGT
GTTGCTTTCAACGCTCTTGTTTCTTTGAACCCTTTCGAAGGCGCTGCAAC
CAAAAGTCGTCTGTTGATGTAAATGTGTGTGTGTTGTTACTGTCATTGTG
TGTACGTATCGCGCGAACCGGCTGGCCATTGATCCCGTCTGGCGTACTGT
ACTTCTGTGAAACGGGTCATTCTCGCGTTATGACTGCAAGCCATCGGCAT
CTTTTCCGTCGCCTTCGTGCCTTGTGCCGTATCGCTTTCTTGGCCATCTT
CTGCCCCGTGCTCTTCCCGAACGTTTGTGTCACCGTCTTCGCTTTGGCTG
CCATTGTCATTGTTGGTGATGTTGCTGCTATTGCTATTGCTACTGCTGCT
GTTGTTGTTTGTTGTTGTCCAGAGGACGCGGAGACTACGGAGGCGAAGGA
GCTGCGAGAGCTCAAAGAGTCCCTGGAGGGGACGCCTCCCGTTGGCCCCC
TGGTGGCCGGAGCCAAGACATTGGACCAGGTACATACCGTA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16038:236..2326+

>mRNA_E-fasciculatus_F_contig16038.4136.1 ID=mRNA_E-fasciculatus_F_contig16038.4136.1|Name=mRNA_E-fasciculatus_F_contig16038.4136.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=966bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16038:236..2326+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGGTGGTGCTACTACAAGGACACGGAGAGGGTGCTGGGACAGACCTTCGG
CGTCCTGGTCCTGCAGGACTTCGAGAGGTGGTGCTACTACAAGGACACGG
AGAGGGTGCTGGGACAGACCTTCGGCGTCCTGGTCCTGCAGGACTTCGAG
GCGTTGACGCCCAATCTGCTGGCGAGGACAATCGAGACGGTGGAAGGAGG
CGGCCTTGTCATCCTGCTGCTCAAGACCGTCACCAGCCTCAAGCAGCTCT
ACGCCATGTCCATGGACGTGCACTCCAGGCGTTGACGCCCAATCTGCTGG
CGAGGACAATCGAGACGGTGGAAGGAGGCGGCCTTGTCATCCTGCTGCTC
AAGACCGTCACCAGCCTCAAGCAGCTCTACGCCATGTCCATGGACGTGCA
CTCCAGATTCCGCACGGAGAGCTCCGGAGACGTGGTCGGCCGGTTCAACG
AGCGCTTCATGCTCACGCTGGGCGACTGCAAGAGCTGCCTCGTGTGCGAC
GACGAGCTTAACGTGCTCCCTCTCTCGTCCCACGCGAGAGACATCGTGCC
TCTTCCGCCCGTCGACGATTCCGCACGGAGAGCTCCGGAGACGTGGTCGG
CCGGTTCAACGAGCGCTTCATGCTCACGCTGGGCGACTGCAAGAGCTGCC
TCGTGTGCGACGACGAGCTTAACGTGCTCCCTCTCTCGTCCCACGCGAGA
GACATCGTGCCTCTTCCGCCCGTCGACGAGGACGCGGAGACTACGGAGGC
GAAGGAGCTGCGAGAGCTCAAAGAGTCCCTGGAGGGGACGCCTCCCGTTG
GCCCCCTGGTGGCCGGAGCCAAGACATTGGACCAGGTACATACCGTAAGG
ACGCGGAGACTACGGAGGCGAAGGAGCTGCGAGAGCTCAAAGAGTCCCTG
GAGGGGACGCCTCCCGTTGGCCCCCTGGTGGCCGGAGCCAAGACATTGGA
CCAGGTACATACCGTA
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