mRNA_E-fasciculatus_F_contig1603.4133.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1603.4133.1 vs. uniprot
Match: A0A150FWK8_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150FWK8_GONPE) HSP 1 Score: 174 bits (440), Expect = 1.880e-48 Identity = 76/137 (55.47%), Postives = 93/137 (67.88%), Query Frame = 1
Query: 130 SRCFCGCSYKMHVFRRGHT-LPVCKTCECQGFDFVPSRPEEIGEWWLPRRPGFDASSWRAKCRCGHTHEEHHPVRRSCGSCKCGEFYSAYGCVVCDARQEDHQTQVETAEERVSAGRPVGRDYIPLSQSPQLSEMTF 537
SRCFC SY H F + PVCK C C+ F F+PSRPEE+GEWWLPRR GF+ +WRAKCRCGH H+EH P R C C C F S + C+ CD + EDH+T ETA+ER+ AGRPVG ++ PLS P + +M F
Sbjct: 61 SRCFCNHSYAEHFFVSPKSPYPVCKGCSCRAFAFIPSRPEEVGEWWLPRRKGFNVHTWRAKCRCGHGHDEHDPTHRRC-RCGCPAFISNFACLACDLKWEDHETVFETAQERLIAGRPVGDEFRPLSDDPTIRDMVF 196
BLAST of mRNA_E-fasciculatus_F_contig1603.4133.1 vs. uniprot
Match: A0A835SDR5_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835SDR5_9CHLO) HSP 1 Score: 171 bits (434), Expect = 2.980e-48 Identity = 75/138 (54.35%), Postives = 94/138 (68.12%), Query Frame = 1
Query: 127 RSRCFCGCSYKMHVFRRGHT-LPVCKTCECQGFDFVPSRPEEIGEWWLPRRPGFDASSWRAKCRCGHTHEEHHPVRRSCGSCKCGEFYSAYGCVVCDARQEDHQTQVETAEERVSAGRPVGRDYIPLSQSPQLSEMTF 537
++RCFC + H F + P+CK+C C+GF F+PSRPEEIGEWWLPRR GF+ +WRAKCRCGH H+EH P R C C C F S + C+ CD + EDH+T ETA ER+ AGRPVG D+ PL+ P L +M F
Sbjct: 35 KARCFCDHPFADHFFVSPKSPYPICKSCNCRGFAFIPSRPEEIGEWWLPRRKGFNVHTWRAKCRCGHGHDEHDPHTRRC-RCGCPAFTSNFACLACDLKWEDHETVFETARERLVAGRPVGEDFRPLADDPALRDMVF 171
BLAST of mRNA_E-fasciculatus_F_contig1603.4133.1 vs. uniprot
Match: A0A7R9YVQ9_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9YVQ9_9CHLO) HSP 1 Score: 168 bits (426), Expect = 2.710e-46 Identity = 70/137 (51.09%), Postives = 92/137 (67.15%), Query Frame = 1
Query: 130 SRCFCGCSYKMHVFRRGHT-LPVCKTCECQGFDFVPSRPEEIGEWWLPRRPGFDASSWRAKCRCGHTHEEHHPVRRSCGSCKCGEFYSAYGCVVCDARQEDHQTQVETAEERVSAGRPVGRDYIPLSQSPQLSEMTF 537
+RCFCG +++ H F P C +C C GF FVP RPEE+GEWWLPRR GF+ +WRAKCRCGH H+ H P+ + C SC C F S + C+VCD + E+H+T ET ER++AGRPVG + PL+ +L +M F
Sbjct: 62 ARCFCGHAFEEHQFLSSRAPAPRCCSCACGGFSFVPQRPEEVGEWWLPRRKGFNVHTWRAKCRCGHAHDVHEPLYKRCLSCGCSTFQSNFACLVCDGKWEEHETVFETTRERIAAGRPVGDAFKPLADDAELQKMVF 198
BLAST of mRNA_E-fasciculatus_F_contig1603.4133.1 vs. uniprot
Match: A0A0G4EG44_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EG44_VITBC) HSP 1 Score: 167 bits (422), Expect = 2.640e-45 Identity = 71/138 (51.45%), Postives = 90/138 (65.22%), Query Frame = 1
Query: 130 SRCFCGCSYKMHVFRRGHTL-PVCKTCECQGFDFVPSRPEEIGEWWLPRRPGFDASSWRAKCRCGHTHEEHHPVRR-SCGSCKCGEFYSAYGCVVCDARQEDHQTQVETAEERVSAGRPVGRDYIPLSQSPQLSEMTF 537
S+CFCG H F+ L P C CEC+ + FVP+RPEE+GEWWLPRRPGFD +WRAKC+C HTHEEH P R C C C F SA+ C+ CD EDH+T E+ ER +AGRPV D++P ++ P+ E +
Sbjct: 67 SKCFCGHPLSSHEFKNSRALWPHCTMCECKAYAFVPTRPEEVGEWWLPRRPGFDVRTWRAKCKCKHTHEEHMPNRPYRCRKCPCSTFTSAFLCIACDKHWEDHETVFESEAERRAAGRPVNEDFVPFAEMPEFYEAVY 204
BLAST of mRNA_E-fasciculatus_F_contig1603.4133.1 vs. uniprot
Match: A0A835SEC1_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835SEC1_9CHLO) HSP 1 Score: 171 bits (434), Expect = 5.650e-45 Identity = 75/138 (54.35%), Postives = 94/138 (68.12%), Query Frame = 1
Query: 127 RSRCFCGCSYKMHVFRRGHT-LPVCKTCECQGFDFVPSRPEEIGEWWLPRRPGFDASSWRAKCRCGHTHEEHHPVRRSCGSCKCGEFYSAYGCVVCDARQEDHQTQVETAEERVSAGRPVGRDYIPLSQSPQLSEMTF 537
++RCFC + H F + P+CK+C C+GF F+PSRPEEIGEWWLPRR GF+ +WRAKCRCGH H+EH P R C C C F S + C+ CD + EDH+T ETA ER+ AGRPVG D+ PL+ P L +M F
Sbjct: 35 KARCFCDHPFADHFFVSPKSPYPICKSCNCRGFAFIPSRPEEIGEWWLPRRKGFNVHTWRAKCRCGHGHDEHDPHTRRC-RCGCPAFTSNFACLACDLKWEDHETVFETARERLVAGRPVGEDFRPLADDPALRDMVF 171
BLAST of mRNA_E-fasciculatus_F_contig1603.4133.1 vs. uniprot
Match: A0A7S0V496_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0V496_9CHLO) HSP 1 Score: 163 bits (412), Expect = 2.520e-44 Identity = 66/137 (48.18%), Postives = 85/137 (62.04%), Query Frame = 1
Query: 130 SRCFCGCSYKMHVFR-RGHTLPVCKTCECQGFDFVPSRPEEIGEWWLPRRPGFDASSWRAKCRCGHTHEEHHPVRRSCGSCKCGEFYSAYGCVVCDARQEDHQTQVETAEERVSAGRPVGRDYIPLSQSPQLSEMTF 537
SRCFC ++ H F + P C C C+ F F+P RPEE+GEWWLPRR GFD +WRAKCRCGH H++H PV R C C CG+F S + C+ CD E H+T E+ ER +A +P+G Y P S P + + F
Sbjct: 61 SRCFCYHNFSQHNFASKKSVFPHCTLCRCKAFSFIPQRPEEVGEWWLPRRKGFDVRTWRAKCRCGHGHDDHDPVARHCSVCGCGQFNSVFACLSCDMNWEHHETVFESEMERAAASKPIGNAYRPFSDDPSMRSLVF 197
BLAST of mRNA_E-fasciculatus_F_contig1603.4133.1 vs. uniprot
Match: A0A7S2NZ14_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2NZ14_9DINO) HSP 1 Score: 159 bits (403), Expect = 1.370e-43 Identity = 69/139 (49.64%), Postives = 87/139 (62.59%), Query Frame = 1
Query: 130 SRCFCGCSYKMHVFRRGHTL--PVCKTCECQGFDFVPSRPEEIGEWWLPRRPGFDASSWRAKCRCGHTHEEHHPVRRSCGSCKCGEFYSAYGCVVCDARQEDHQTQVETAEERVSAGRPVGRDYIPLSQSPQLSEMTFG 540
SRCFCG Y HV+ +G P C C+C GF ++P RPEE+GEWWLPRR GFD WRAKCRCGH H++H P R +C C C + SA+ C C R EDH+ ET ER +AG VG ++PL+ +P + FG
Sbjct: 35 SRCFCGHDYSEHVWDKGRRRLRPACGCCDCDGFRYMPRRPEEVGEWWLPRRRGFDVRVWRAKCRCGHGHDDHDPNRLACRLCGCTAYSSAWLCTCCGGRWEDHEALWETEGERRAAGLAVGSAFVPLASTPSIQAAAFG 173
BLAST of mRNA_E-fasciculatus_F_contig1603.4133.1 vs. uniprot
Match: A0A0G4GRF0_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GRF0_9ALVE) HSP 1 Score: 164 bits (415), Expect = 1.020e-42 Identity = 74/142 (52.11%), Postives = 90/142 (63.38%), Query Frame = 1
Query: 127 RSRCFCGCSYKMHVF-RRGHTLPVCKTCECQGFDFVPSRPEEIGEWWLPRRPGFDASSWRAKCRCGHTHEEHHPVR----RSCGSCKCGEFYSAYGCVVCDARQEDHQTQVETAEERVSAGRPVGRDYIPLSQSPQLSEMTF 537
+S+CFCG YK H F R P C TC C+ F+F+P+RPEE GEWWLPRRPGF S WRAKC+CGHTHE+H R R C KC + SA+ CV CD E H+T ET +ER G PVG D+IPL + P+ + F
Sbjct: 97 KSKCFCGHFYKDHQFANRRAPWPKCCTCACEAFEFIPTRPEEAGEWWLPRRPGFKVSEWRAKCKCGHTHEDHDTKRPHRCRLCPPFKCSSYTSAWLCVACDRHWEQHETVFETEQERRDQGLPVGEDFIPLKELPEFYDAVF 238
BLAST of mRNA_E-fasciculatus_F_contig1603.4133.1 vs. uniprot
Match: A0A835YE58_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YE58_9CHLO) HSP 1 Score: 164 bits (414), Expect = 1.290e-42 Identity = 74/138 (53.62%), Postives = 90/138 (65.22%), Query Frame = 1
Query: 130 SRCFCGCSYKMHVFRRGHTLPV--CKTCECQGFDFVPSRPEEIGEWWLPRRPGFDASSWRAKCRCGHTHEEHHPVRRSCGSCKCGEFYSAYGCVVCDARQEDHQTQVETAEERVSAGRPVGRDYIPLSQSPQLSEMTF 537
+RCFCG S+ H F P CKTC C+ F +VP RPEE+GEWWLPRR GF+ +WRAKCRCGH H+EH P R C C C F S + C+ CD + EDH+T ETA ER+ AGRPVG D+ PL P + E+ F
Sbjct: 38 ARCFCGHSFGDHQFLNWPKTPYPSCKTCACRAFQYVPKRPEEVGEWWLPRRKGFNVHTWRAKCRCGHGHDEHDPNARRC-RCGCPVFQSNFACLACDLKWEDHETVFETARERLVAGRPVGDDFRPL-MDPSMRELVF 173
BLAST of mRNA_E-fasciculatus_F_contig1603.4133.1 vs. uniprot
Match: D8TSI8_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TSI8_VOLCA) HSP 1 Score: 155 bits (393), Expect = 1.610e-42 Identity = 70/137 (51.09%), Postives = 86/137 (62.77%), Query Frame = 1
Query: 130 SRCFCGCSYKMHVFRRGHT-LPVCKTCECQGFDFVPSRPEEIGEWWLPRRPGFDASSWRAKCRCGHTHEEHHPVRRSCGSCKCGEFYSAYGCVVCDARQEDHQTQVETAEERVSAGRPVGRDYIPLSQSPQLSEMTF 537
+RCFC SY H F P+CK C C+ F FVPSRPEE+GEWWLPRR GF+ +WRAKCRCGH EH P C F S + C+VCD + EDH+T E+A ER+ AGRPVG D+ PL+ + E+ F
Sbjct: 24 ARCFCNHSYADHFFVSPKAPYPICKACSCRAFAFVPSRPEEVGEWWLPRRKGFNVHTWRAKCRCGHXXXEHDP-NAXXXXXXCSMFQSNFACLVCDLKWEDHETVFESATERLMAGRPVGEDFRPLADDSAIRELVF 159 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1603.4133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1603.4133.1 >prot_E-fasciculatus_F_contig1603.4133.1 ID=prot_E-fasciculatus_F_contig1603.4133.1|Name=mRNA_E-fasciculatus_F_contig1603.4133.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=393bp MRLLPWEEMPRRARRATFQRFCHTASPQERKRSCGKKKRPRRRSRCFCGCback to top mRNA from alignment at E-fasciculatus_F_contig1603:1567..5370- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1603.4133.1 ID=mRNA_E-fasciculatus_F_contig1603.4133.1|Name=mRNA_E-fasciculatus_F_contig1603.4133.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3804bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1603:1567..5370- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1603:1567..5370- >mRNA_E-fasciculatus_F_contig1603.4133.1 ID=mRNA_E-fasciculatus_F_contig1603.4133.1|Name=mRNA_E-fasciculatus_F_contig1603.4133.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2358bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1603:1567..5370- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |