mRNA_E-fasciculatus_F_contig160.4112.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig160.4112.1 vs. uniprot
Match: D8LQU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQU0_ECTSI) HSP 1 Score: 568 bits (1464), Expect = 6.150e-186 Identity = 319/456 (69.96%), Postives = 335/456 (73.46%), Query Frame = 1
Query: 1 MAKDRVEEHPVA-QEGSEFFCLEVYVADVESCSFSDTGVLPTAILSLLDFEPLVFDLSRTPSAQRQARRKRGPGFREVPQWEEEDEQHDGIGKVESTNRTSFRAPGDGAQHDDHLFNNRKSKATASTRVKHASYADIENGRHHPKSFFCSKGKSCIFTANPADLSQALQTQSALTFLVASKLSQRQAAIHGSCAIDLSTFGPNVELSQSLPRAVSSWGHRTTRVESKDLKGVAVAWADLTVSLSCLGATGSLIDLTPATAAAASRWVSGCGIPSAAAPPRPDHSTXXXXXXXGLPVVQDQSTTNGTQLDGQARGHIPVAKHPETVNPMCIYTEIGSARCGDGRT-----GTGGTLAGGECWTCEYYPRDGRLAAPTSAAAGVIEPTAAAAAGRDVSSADLGPKHGGAVSLGDPCPAVEEEIDAAV-AVGGPSGDSGGVEGDGXXXXETATKTSPLR 1347
MAK+R+EEHP+ +E SEFFCLEVYVADVESCSF+ T V PT ILSLLDFEPLVFDLSRTP AQRQAR KRGPG REV QWEE+D+QH+GIG+VESTN T FRA DGAQHDDHLFNNRKSK TA+T VKHASYAD ENG HPK FFCSKGKSCIFTANPADLS+ALQTQSALTFLVASKLS RQAAIHGSCAIDLSTFGPN ELS SLPRAVS WGHRTT VESKDLKG VA A LTVSLSCLGATGSLI LTP AS SG G PSAAAPPRPDHST GLPVV DQ TT GTQLD QARGH PVAK P T + MC + E GSAR GDGRT G GGT AG ECWTCEY PRDGRL PTS+AA +EPTAAA AVGGP GDS G E DG ET T+TSP R
Sbjct: 1 MAKNRLEEHPLDHREQSEFFCLEVYVADVESCSFAHTSVTPTVILSLLDFEPLVFDLSRTPPAQRQARGKRGPGLREVSQWEEKDDQHNGIGRVESTNNT-FRASSDGAQHDDHLFNNRKSKTTATTTVKHASYADNENGPCHPKPFFCSKGKSCIFTANPADLSRALQTQSALTFLVASKLSLRQAAIHGSCAIDLSTFGPNAELSHSLPRAVSCWGHRTTCVESKDLKGATVARAGLTVSLSCLGATGSLIHLTPVRTGVASYRASGNGSPSAAAPPRPDHSTPDRSTPGGLPVVSDQWTTEGTQLDAQARGHAPVAKQPGTDHLMCRHAEAGSARYGDGRTKESGSGAGGTSAGAECWTCEYNPRDGRLVGPTSSAAAAVEPTAAATVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGGPPGDSAGAEADGNDDAETDTETSPTR 455 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig160.4112.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig160.4112.1 >prot_E-fasciculatus_F_contig160.4112.1 ID=prot_E-fasciculatus_F_contig160.4112.1|Name=mRNA_E-fasciculatus_F_contig160.4112.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=1345bp MAKDRVEEHPVAQEGSEFFCLEVYVADVESCSFSDTGVLPTAILSLLDFEback to top mRNA from alignment at E-fasciculatus_F_contig160:21082..27746+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig160.4112.1 ID=mRNA_E-fasciculatus_F_contig160.4112.1|Name=mRNA_E-fasciculatus_F_contig160.4112.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=6665bp|location=Sequence derived from alignment at E-fasciculatus_F_contig160:21082..27746+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig160:21082..27746+ >mRNA_E-fasciculatus_F_contig160.4112.1 ID=mRNA_E-fasciculatus_F_contig160.4112.1|Name=mRNA_E-fasciculatus_F_contig160.4112.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=8070bp|location=Sequence derived from alignment at E-fasciculatus_F_contig160:21082..27746+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |