mRNA_E-fasciculatus_F_contig16.4109.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig16.4109.1 vs. uniprot
Match: D8LPR7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPR7_ECTSI) HSP 1 Score: 175 bits (443), Expect = 9.110e-51 Identity = 83/84 (98.81%), Postives = 83/84 (98.81%), Query Frame = 1
Query: 376 MGLDSLDLLVVPWPSGTQGHRALSDRGERQRDGDLFLKTWKALQRLVDAGTVRALGVDRFLPWQLDFVIAQPGPRPAVNFLHVS 627
MGLDSLDLLVVPWPSGTQGHRALSDRGERQRDGDLFLKTWKALQRLVDAGTVRALGVDRF PWQLDFVIAQPGPRPAVNFLHVS
Sbjct: 1 MGLDSLDLLVVPWPSGTQGHRALSDRGERQRDGDLFLKTWKALQRLVDAGTVRALGVDRFFPWQLDFVIAQPGPRPAVNFLHVS 84
BLAST of mRNA_E-fasciculatus_F_contig16.4109.1 vs. uniprot
Match: F0Y343_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y343_AURAN) HSP 1 Score: 89.4 bits (220), Expect = 7.380e-16 Identity = 73/248 (29.44%), Postives = 111/248 (44.76%), Query Frame = 1
Query: 61 MWSYKYTSSASVFVDQCRVGARLE---------TVTPVSQLVELFTAASRDQRCKCFFFDAGTEKHLASSFKTLLARPDRD-----------RKGIFVGLTFPADFPCHRSTKTIPQRVASFIHAMGLDSLDLLVVPWPS--GTQGHRALSDRGERQRDGDLFLKTWKALQRLVDAGTVRALGVDRFLPWQLDFVIAQPGP--RPAVN----------FLHVSLTSHQERVASYSHARQIEVVASLDT 702
MWS +TSS S FV+ RVG + E + V++ + L A + + + D G E + + + D D R + V D CHR++ + + +G+ LD L VPWP+ G G+ + +R LFL+TWK LQ LV+AG+VR LG + WQL+ +I P RPA N + ++L + R ++ +R IEV+A LDT
Sbjct: 1 MWSTAFTSSRSHFVETARVGIQAEPPSQARSKASEAAVAEALRL--ALGDNSKFRLILVDRGAEGSVRTVLRPEEIVVDEDSPLAPKDPPPPRSELVVVARLGGD--CHRTSDACVVQTRRILDGLGVAKLDGLCVPWPAALGDGGNDPYHVSADVKRQKRLFLRTWKNLQPLVEAGSVRWLGTEMLETWQLERLIEAVAPEQRPAFNGAAKESDVFNLVSLNLVEPRRRTVTWCQSRGIEVLALLDT 244
BLAST of mRNA_E-fasciculatus_F_contig16.4109.1 vs. uniprot
Match: A0A1S3MYQ1_SALSA (aldose reductase-like isoform X1 n=12 Tax=Salmonidae TaxID=8015 RepID=A0A1S3MYQ1_SALSA) HSP 1 Score: 74.7 bits (182), Expect = 2.980e-11 Identity = 42/108 (38.89%), Postives = 63/108 (58.33%), Query Frame = 1
Query: 382 LDSLDLLVVPWPSGTQGHRAL---SDRGERQRDGDLFLKTWKALQRLVDAGTVRALGVDRFLPWQLDFVIAQPGPR--PAVNFLHVSLTSHQERVASYSHARQIEVVA 690
LD LDL ++ WP G Q AL G DG FL+TW+A++ LVDAG V+A+GV F Q++ ++ +PG + PA N + +QE++ +Y H++ I V A
Sbjct: 102 LDYLDLYLIHWPMGFQPGVALFPTDSNGNNIDDGSKFLETWEAMEELVDAGLVKAIGVSNFNKDQIESILNKPGLKYKPANNQVECHPYLNQEKLINYCHSKGISVTA 209
BLAST of mRNA_E-fasciculatus_F_contig16.4109.1 vs. uniprot
Match: A0A060WRU1_ONCMY (Uncharacterized protein n=12 Tax=Oncorhynchus TaxID=8016 RepID=A0A060WRU1_ONCMY) HSP 1 Score: 73.9 bits (180), Expect = 5.400e-11 Identity = 41/108 (37.96%), Postives = 62/108 (57.41%), Query Frame = 1
Query: 382 LDSLDLLVVPWPSGTQGHRAL---SDRGERQRDGDLFLKTWKALQRLVDAGTVRALGVDRFLPWQLDFVIAQPGPR--PAVNFLHVSLTSHQERVASYSHARQIEVVA 690
LD LDL ++ WP G Q L G DG FL+TW+A++ LVDAG V+A+GV F Q++ ++ +PG + PA N + +QE++ +Y H++ I V A
Sbjct: 102 LDYLDLYLIHWPMGFQPGEDLFPTDSNGNNIDDGSKFLETWEAMEELVDAGLVKAIGVSNFNKDQIESILNKPGLKYKPANNQIECHPYLNQEKLINYCHSKGISVTA 209
BLAST of mRNA_E-fasciculatus_F_contig16.4109.1 vs. uniprot
Match: A0A146VGU5_FUNHE (Aldo-keto reductase family 1 member B10 n=3 Tax=Fundulus heteroclitus TaxID=8078 RepID=A0A146VGU5_FUNHE) HSP 1 Score: 73.2 bits (178), Expect = 9.800e-11 Identity = 42/121 (34.71%), Postives = 66/121 (54.55%), Query Frame = 1
Query: 343 IPQRVASFIHAMGLDSLDLLVVPWPSGTQGHRAL---SDRGERQRDGDLFLKTWKALQRLVDAGTVRALGVDRFLPWQLDFVIAQPGPR--PAVNFLHVSLTSHQERVASYSHARQIEVVA 690
+ Q + + LD LDL +V WP G + L GE DG FL+TW+A++ LVDAG V+A+G+ F Q++ ++ +PG + PA N + QE++ +Y H++ I V A
Sbjct: 89 VRQACEKTLSDLKLDYLDLYLVHWPMGFKSGAELFPLDSNGETISDGTHFLETWEAMEELVDAGLVKAIGISNFNKDQIEAILNKPGLKYKPANNQIECHPYLTQEKLINYCHSQGITVTA 209
BLAST of mRNA_E-fasciculatus_F_contig16.4109.1 vs. uniprot
Match: A0A3P9A5S3_ESOLU (Aldo-keto reductase family 1 member B1 n=6 Tax=Esox lucius TaxID=8010 RepID=A0A3P9A5S3_ESOLU) HSP 1 Score: 73.2 bits (178), Expect = 9.980e-11 Identity = 41/108 (37.96%), Postives = 61/108 (56.48%), Query Frame = 1
Query: 382 LDSLDLLVVPWPSGTQ---GHRALSDRGERQRDGDLFLKTWKALQRLVDAGTVRALGVDRFLPWQLDFVIAQPGPR--PAVNFLHVSLTSHQERVASYSHARQIEVVA 690
LD LDL ++ WP G Q H G DG FL TW+A++ LVDAG V+A+GV F Q++ ++ +PG + PA N + +QE++ +Y H++ I V A
Sbjct: 104 LDYLDLYLIHWPMGFQPGDDHFPTDSDGNTIDDGSSFLDTWEAMEELVDAGLVKAIGVSNFNKDQIESILNKPGLKYKPANNQVECHPYLNQEKLINYCHSKGISVTA 211
BLAST of mRNA_E-fasciculatus_F_contig16.4109.1 vs. uniprot
Match: UPI001F07989C (aldo-keto reductase family 1 member B1-like isoform X2 n=1 Tax=Hypomesus transpacificus TaxID=137520 RepID=UPI001F07989C) HSP 1 Score: 72.4 bits (176), Expect = 1.200e-10 Identity = 42/110 (38.18%), Postives = 60/110 (54.55%), Query Frame = 1
Query: 376 MGLDSLDLLVVPWPSGTQGHRAL---SDRGERQRDGDLFLKTWKALQRLVDAGTVRALGVDRFLPWQLDFVIAQPGPR--PAVNFLHVSLTSHQERVASYSHARQIEVVA 690
+ LD LDL +V WP G Q L G DG FL TW A++ LVDAG V+A+G+ F Q++ ++ +PG + PA N + QE++ SY H++ I V A
Sbjct: 100 LSLDYLDLYLVHWPMGFQAGSELFPLDSEGLTVTDGTNFLDTWGAMEELVDAGLVKAIGISNFNKDQIEALLNKPGLKYKPATNQIECHPYLTQEKLISYCHSKGISVTA 209
BLAST of mRNA_E-fasciculatus_F_contig16.4109.1 vs. uniprot
Match: A0A4W5L554_9TELE (Aldo-keto reductase family 1, member B1 (aldose reductase), tandem duplicate 2 n=1 Tax=Hucho hucho TaxID=62062 RepID=A0A4W5L554_9TELE) HSP 1 Score: 71.6 bits (174), Expect = 2.090e-10 Identity = 43/125 (34.40%), Postives = 68/125 (54.40%), Query Frame = 1
Query: 331 STKTIPQRVASFIHAMGLDSLDLLVVPWPSGTQGHRALS---DRGERQRDGDLFLKTWKALQRLVDAGTVRALGVDRFLPWQLDFVIAQPGPR--PAVNFLHVSLTSHQERVASYSHARQIEVVA 690
S + + + + LD LDL ++ WP G Q ALS G DG FL+TW+A++ LVDAG V+A+GV Q++ ++ +PG + PA N + +QE++ +Y H++ I V A
Sbjct: 47 SKSMVKEGCQKTLSDLKLDYLDLYLIHWPMGFQPGEALSLTDSNGNNIDDGSKFLETWEAMEELVDAGLVKAIGVSN--KDQIESILNKPGLKYKPANNQVECHPYLNQEKLINYCHSKGISVTA 169
BLAST of mRNA_E-fasciculatus_F_contig16.4109.1 vs. uniprot
Match: A0A8D0GTQ2_SPHPU (Aldo_ket_red domain-containing protein n=1 Tax=Sphenodon punctatus TaxID=8508 RepID=A0A8D0GTQ2_SPHPU) HSP 1 Score: 71.2 bits (173), Expect = 3.630e-10 Identity = 51/173 (29.48%), Postives = 85/173 (49.13%), Query Frame = 1
Query: 199 CFFFDA---GTEKHLASSFKTLLARPDRDRKGIFVGLTFPADFPCHRSTKTIPQRVASFIHAMGLDSLDLLVVPWPSGTQGHRALSDRGERQR----DGDLFLKTWKALQRLVDAGTVRALGVDRFLPWQLDFVIAQPGPR--PAVNFLHVSLTSHQERVASYSHARQIEVVA 690
C F+ + G E + S+ + + R+ +FV F CH + S + A+ LD LDL ++ WP G + + + E+ D D FL TW+A++ LVDAG V+A+GV F Q++ ++ +PG + P N + QE++ +Y H+ +I V A
Sbjct: 37 CHFYCSPLYGNENEIGSAIQQKIKEGAVKREDLFV--VSKLWFTCHEK-HLVKGACQSTLAALKLDYLDLYLMHWPMGFKAGKEMCPTDEQGMMICGDTD-FLDTWEAMEELVDAGLVKAIGVSNFNHKQIERILNKPGLKYKPVNNQIECHPYLTQEKLINYCHSHEISVTA 205
BLAST of mRNA_E-fasciculatus_F_contig16.4109.1 vs. uniprot
Match: G3Q539_GASAC (Aldo-keto reductase family 1, member B1 (aldose reductase), tandem duplicate 2 n=4 Tax=Eupercaria TaxID=1489922 RepID=G3Q539_GASAC) HSP 1 Score: 70.5 bits (171), Expect = 7.830e-10 Identity = 42/121 (34.71%), Postives = 65/121 (53.72%), Query Frame = 1
Query: 343 IPQRVASFIHAMGLDSLDLLVVPWPSGTQGHRAL---SDRGERQRDGDLFLKTWKALQRLVDAGTVRALGVDRFLPWQLDFVIAQPGPR--PAVNFLHVSLTSHQERVASYSHARQIEVVA 690
+ Q + + LD LDL +V WP G + L GE DG FL+TW A++ LVDAG V+A+GV F Q++ ++ +PG + PA N + QE++ ++ H++ I V A
Sbjct: 89 VRQACEKTLSDLKLDYLDLYLVHWPMGFKPGSELFPLDGAGETISDGTHFLETWAAMEELVDAGLVKAIGVSNFNKEQIEAILNKPGLKYKPANNQVECHPYLAQEKLVNFCHSQGISVTA 209 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16.4109.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig16.4109.1 >prot_E-fasciculatus_F_contig16.4109.1 ID=prot_E-fasciculatus_F_contig16.4109.1|Name=mRNA_E-fasciculatus_F_contig16.4109.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=402bp SLLYNCTAHISAHNFQESGLMWSYKYTSSASVFVDQCRVGARLETVTPVSback to top mRNA from alignment at E-fasciculatus_F_contig16:51791..56676+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig16.4109.1 ID=mRNA_E-fasciculatus_F_contig16.4109.1|Name=mRNA_E-fasciculatus_F_contig16.4109.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4886bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16:51791..56676+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16:51791..56676+ >mRNA_E-fasciculatus_F_contig16.4109.1 ID=mRNA_E-fasciculatus_F_contig16.4109.1|Name=mRNA_E-fasciculatus_F_contig16.4109.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2412bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16:51791..56676+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |