mRNA_E-fasciculatus_F_contig16.4106.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig16.4106.1 vs. uniprot
Match: D8LPR4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPR4_ECTSI) HSP 1 Score: 1135 bits (2937), Expect = 0.000e+0 Identity = 633/787 (80.43%), Postives = 663/787 (84.24%), Query Frame = 2
Query: 2372 MEKLATVFRKAYDPTLQRLWADWAVHEDDGQWYLVEVHGVKTEADLRNAAAAKAVPIAFAEVESKVSRSTRRIPPKHICDDPDELKARISAAGPTQELSFVEPSKKMIAIAQSKRHPSRPPTPSMVAESTKKALLARREXXXXXXXXXXXXXXXXXRRMLNQYWRCAGDFCETHPGGQRQASADATGHKKGNRDNKVETTALAAFQPSERDRGRPVRNRCLEGGAEKSSAGVRGGGGDGRDGTECEEDDIVGRRKHALSVETPRTVLFRLVLNARAALLRWRPSAAEFSMMEKPVQLCSVCYTVCSTIERERIETTRRAMDAEEEATKAGKARRNRKPPGWKSRVQHELEESLSADRRVVSNLIDSFEAAAAIAMAAAAPNGEKIKRVSSSSSSKVCRENNYQHVRKNGEGRGDRGGRGGSVVTWADRYPVAEIHLLEESEGDACGESMLAKAGRAFRSAHSTPRRKAAGAGRTSLGQSERRSKTAPMAPSSGLTMPPVVQQERDEETPPAVVGLDAKRTHNRKED-QRQVQQGLTKLQVRARRKAKERARRRVRIKATDGAARNEPSGKQGDDMISAEDDGRAGSTPDDQTKVYLDQFPPLLQPTAPTALLWGGAEPGEDTPAGRIEDPDGRGGEDGSDVKRFGRGTGSFCNDVKTSCEGAAIINGSEISSR--GSGDPCIVYSVKQSQHVLEPTAPAVNWRQEGEQEQIEKVEAQGTERVRVARDGENSDYGEEEFEKDFEADEFEEAPGGKGGSSGETPGCTTEVVVGXXXXXXXXXXXXXEEA 4723
MEKL TV RKAYDPTLQRLWADWAVHED+GQWYLVEVHGVKTEADLRNAAAAKAVP A AEVESKVSRSTRRIPPKHIC DPDEL+ARISAAGPTQELSFVEPSKKMIA+A+SKR P RPPTPSMVAESTKKALL+RRE RRMLNQYWRCAGDFCETHP GQRQASADATG KKGNRDNKVET +L QPSER RGRPVRNR LEG +EKSS G G DGTECEEDDIVGRRKHALSVETPRTVLFRLVLNARAALLRWRPSAAEFSMMEKPVQLCSVCY VCSTIER+RIETTRRAMDAEEEA KAGKARRNRKPPGWKSRVQHELEESLSADR VVS LIDSFEAAAAIAMAAAAPNGEKIKR K+C NNYQ VR+N EG GDRGGR S VTWADRYPV EI EE+E DACGESMLAK G RSAHSTPR+K GAGRTSLG S RRSKTAP+APSSGLT+PP+VQQE EETPP VVGLDAKRT NRKE+ QRQ+Q TKLQVRARRKA +VR KATDGAARNEP GKQ D I AEDDGRAGSTP DQ K+ D+FPPLLQPTAPTALL GGAEPGEDTPAGRIE PDGRGGE+G V+RFGRGTGSFC+DVKTSC+GAAI+NGSEI+SR GSG+ CI YSVKQ Q +LEPTAPAVNW EGEQ IEK EAQG ER R ARD ENSDYGEE+FEKDFEAD+FE APGGKG SSGETPGCTTE VVG XXXXXXXXXEEA
Sbjct: 1 MEKLTTVLRKAYDPTLQRLWADWAVHEDNGQWYLVEVHGVKTEADLRNAAAAKAVPPALAEVESKVSRSTRRIPPKHICGDPDELRARISAAGPTQELSFVEPSKKMIAVAESKRRPRRPPTPSMVAESTKKALLSRREGASERKKSVPKGGDGGARRMLNQYWRCAGDFCETHPDGQRQASADATGDKKGNRDNKVETGSLVVSQPSERARGRPVRNRGLEGASEKSSTGGGGXXXXXXDGTECEEDDIVGRRKHALSVETPRTVLFRLVLNARAALLRWRPSAAEFSMMEKPVQLCSVCYMVCSTIERDRIETTRRAMDAEEEAAKAGKARRNRKPPGWKSRVQHELEESLSADRHVVSRLIDSFEAAAAIAMAAAAPNGEKIKRAXXXXXXKICGSNNYQEVRENREGGGDRGGRRESGVTWADRYPVVEIRQQEENEEDACGESMLAKTGGVSRSAHSTPRKKVVGAGRTSLGPSNRRSKTAPLAPSSGLTIPPLVQQESGEETPPVVVGLDAKRTQNRKEEEQRQIQPSRTKLQVRARRKAXXXXXXQVRNKATDGAARNEPFGKQRDGKILAEDDGRAGSTPGDQKKIDPDKFPPLLQPTAPTALLRGGAEPGEDTPAGRIEGPDGRGGEEGGKVERFGRGTGSFCDDVKTSCDGAAIVNGSEIASRSSGSGEACIGYSVKQLQQLLEPTAPAVNWGHEGEQ--IEKEEAQGGERARAARDCENSDYGEEDFEKDFEADDFEVAPGGKGSSSGETPGCTTEAVVGDNASXXXXXXXXXEEA 785 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16.4106.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig16.4106.1 >prot_E-fasciculatus_F_contig16.4106.1 ID=prot_E-fasciculatus_F_contig16.4106.1|Name=mRNA_E-fasciculatus_F_contig16.4106.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=1572bp MVEAGNLSRGPPSEAWARSLRQETALQDRYRRAIHYVEGGVENVGFDRWNback to top mRNA from alignment at E-fasciculatus_F_contig16:17757..27328- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig16.4106.1 ID=mRNA_E-fasciculatus_F_contig16.4106.1|Name=mRNA_E-fasciculatus_F_contig16.4106.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=9572bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16:17757..27328- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16:17757..27328- >mRNA_E-fasciculatus_F_contig16.4106.1 ID=mRNA_E-fasciculatus_F_contig16.4106.1|Name=mRNA_E-fasciculatus_F_contig16.4106.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=9432bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16:17757..27328- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |