mRNA_E-fasciculatus_F_contig16.4105.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig16.4105.1 vs. uniprot
Match: D8LPR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPR3_ECTSI) HSP 1 Score: 795 bits (2054), Expect = 4.810e-286 Identity = 431/517 (83.37%), Postives = 440/517 (85.11%), Query Frame = 1
Query: 328 MGNEVSRTTAAQQSHGGRKARINIDSPYAEDFQKASLEDVSECLLRRDRDFGHYKMAINSEEFRQVFEGILTNPTELFSVFDNRGKGLVDVSEVFASAFLFAAGTPKGLDAKLEKMFALFDFDGNGALSDVEAEIMLECVVRGASRVAMMPQPEDVLDSIGKLTTSLFSHSNRGATAGELTLRDLKDWISEREDVAVFLSNFIEARMIISSLELVDKSVALGMNMCKHPSPQDDS-WEHTDGTVDGARAGEMLRSLTTLGKTECLRAGLETVVEADAAAVVRMLSGNSGA-GGRRERVDAEALEELLRFWVAFSVVDEDGVGSVSMGDLKALLWLGGGTGGEEPPEATVQKTANDIDESQDGVINRMEWMRFTAVLDEGTGNVGYDGGLLKVFRRYDDDHSGSITATEMTMMVRDSVSEAVAEAPDNCSLRPDMETVVETLVKDVARDLVAVMDVTGSGMLGWTEFKKNQTLVTARLATLREFVFSVALQRGGPAAATSDAPPELTSSNGSSRPDSL 1872
MGNEVSRT AAQQSHGGRK RINIDSPYAEDFQ VFEGILTNPTELFSVFDNRGKGLVDVSEVFASAFLFAAGTPKGLDAKLEK+FALFDFDGNGALSDVEAEIMLECVVRG GA AGELTLRDLKDWISEREDVAVFLSNFIEARMIISS ELVD+SVALGM+ CKHPSPQDDS EH DGTVDGARAGE+LRSLTTLGKTECLRAGLE VVEADAAAVVRMLSGNSGA GGRRERVD EALEELLRFWVAFSVVDEDGVGSVSMGDLKALLWLGGGTGGEEPPEATVQKTAN IDESQDGVINR+EWMRFTAVLDEGTGNVGYDGGLLKVFRRYDDDHSGSITATEMTMMVRDSVSEA+AEAPDNCSLRPD+E VVETLVKDVARDLVAVMDVTGSGMLGWTEFKKNQTLVTARLATLREFVFSVALQRGG AAAT+DAPPEL SSNGS+RPDSL
Sbjct: 1 MGNEVSRTAAAQQSHGGRKVRINIDSPYAEDFQ--------------------------------VFEGILTNPTELFSVFDNRGKGLVDVSEVFASAFLFAAGTPKGLDAKLEKIFALFDFDGNGALSDVEAEIMLECVVRG------------------------------GAAAGELTLRDLKDWISEREDVAVFLSNFIEARMIISSQELVDRSVALGMSTCKHPSPQDDSPGEHKDGTVDGARAGEILRSLTTLGKTECLRAGLEAVVEADAAAVVRMLSGNSGATGGRRERVDVEALEELLRFWVAFSVVDEDGVGSVSMGDLKALLWLGGGTGGEEPPEATVQKTANGIDESQDGVINRIEWMRFTAVLDEGTGNVGYDGGLLKVFRRYDDDHSGSITATEMTMMVRDSVSEAIAEAPDNCSLRPDIEPVVETLVKDVARDLVAVMDVTGSGMLGWTEFKKNQTLVTARLATLREFVFSVALQRGGTAAATADAPPELASSNGSTRPDSL 455
BLAST of mRNA_E-fasciculatus_F_contig16.4105.1 vs. uniprot
Match: A0A6H5KRT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRT1_9PHAE) HSP 1 Score: 141 bits (355), Expect = 1.360e-36 Identity = 76/84 (90.48%), Postives = 78/84 (92.86%), Query Frame = 1
Query: 1621 METVVETLVKDVARDLVAVMDVTGSGMLGWTEFKKNQTLVTARLATLREFVFSVALQRGGPAAATSDAPPELTSSNGSSRPDSL 1872
ME VVETLVKDV RDLVAVMDVTGSGMLGWTE KKNQTLVTARLATLREFVFSVALQRGG AAAT+DAPPELT SN S+RPDSL
Sbjct: 1 MEPVVETLVKDVTRDLVAVMDVTGSGMLGWTELKKNQTLVTARLATLREFVFSVALQRGGTAAATADAPPELTRSNCSTRPDSL 84
BLAST of mRNA_E-fasciculatus_F_contig16.4105.1 vs. uniprot
Match: W4FH88_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FH88_9STRA) HSP 1 Score: 145 bits (366), Expect = 5.750e-34 Identity = 112/477 (23.48%), Postives = 232/477 (48.64%), Query Frame = 1
Query: 385 ARINIDSPYAEDFQKASLEDVSECLLRRD---RDFGHYKMAINSEEFRQVFEGILTNPTELFSVFDNRGKGLVDVSEVFASAFLFAAGTPKGLDAKLEKMFALFDFDGNGALSDVEAEIMLECVVRGASRVAMMPQPEDVLDSIGKLTTSLFSH--SNRGATAGELTLRDLKDWISEREDVAVFLSNFIEARMIISSLELVDKSVALGMNM------CKHPSPQDDSWEHTDGTVD-GARAGEMLRSLTTLGKTECLR-AGLETVVEADAAAVVRMLSGNSGAGGRRERVDAEALEELLRFWVAFSVVDEDGVGSVSMGDLKALLWLGGGTGGEEPPEATVQKTANDIDESQDGVINRMEWMRFTAVLDEGTGNVGYDGGLLKVFRRYDDDHSGSITATEMTMMVRDSVSEAV-AEAPDNCSLRPDMETVVETLVKDVARDLVAVMDVTGSGMLGWTEFKKNQTLVTARLATLREFV 1773
A+ SP +++++ L ++ + + D R++G MA+N ++F Q+F + ++ F FD+RG G VDV EV A +F+ ++ K++ +F+LFDFD +S E +++ C RG RV + +PE++ + L F+ SNR ++L W+ + V ++L F R+I ++ L DK + L +++ +H S +S ++G V A +RS+ K L+ AG++ V+ + M+ N + + ++ +AF D+D +V + +L+ LLWL +EP + + +D+ ++G ++ MEW+ + + +D+ TG++ ++ L +F D + +GSI + ++ ++ V+ V A P + +++ ++ + ++++ +DV S + W +FK + + R+A ++ +V
Sbjct: 9 AKYTSASPILKEYRQVHLREIRQVIQNYDDMQREYGDI-MAVNQDQFDQLFSVVCSDTAVHFQEFDSRGVGRVDVLEVLAVLIVFSKDL---IEPKIQALFSLFDFDKTCYISHTELVMLMICCTRGLCRVVGLERPENL--ELECLANEAFAKIDSNRN---NRVSLSKFSFWLHHEQSVILYLKKFASTRLIADAMLLYDKQLKLAIDLFLAAAVVRHKSSLGNS---SEGAVSYPACTLVQVRSVIAALKLRHLQPAGVDEVI----GYMTHMVEANEES--TNPVIVLPNFLSVMSPALAFFAADDDHSMTVDVHELRILLWL---MRKKEPTDLQTKGMLLALDDDENGKLSCMEWVHYASGIDQSTGSLAFNAQLRYLFEHCDREGNGSIHVADFSVGLKTVVTRCVHAAIPRTNKVGDKKWAIIDDMLASLVKEIMDCVDVNNSKTIEWKKFKAHLEFIEDRVAKVKSYV 464
BLAST of mRNA_E-fasciculatus_F_contig16.4105.1 vs. uniprot
Match: A0A6A4ZNJ1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZNJ1_9STRA) HSP 1 Score: 115 bits (287), Expect = 1.260e-23 Identity = 105/465 (22.58%), Postives = 211/465 (45.38%), Query Frame = 1
Query: 472 RDFGHYKMAINSEEFRQVFEGILTNPTELFSVFDNRGKGLVDVSEVFASAFLFAAGTPKGLDAKLEKMFALFDFDGNGALSDVEAEIMLECVVRGASRVAMMPQPEDVLDSIGKLTTSLFSH--SNRGATAGELTLRDLKDWISEREDVAVFLSNFIEARMIISSLELVDKSVALGMNMCKHPSPQDDS--WEHTDGT-VDGARAGEMLRSLTTLGKTECLRAGLETVVEADAAAVVRMLSGNSGAGGRRERVDAE--------ALEELLRFW---VAFSVVDEDGVGSVSMGDLKALLWLGGGTGGEEPPEATVQKTANDIDESQDGVINRMEWMRFTA--------VLDEGTGNVGYDGGLLKVFRRYDDDHSGSITATEMTMMVRDSVSE---AVAEAPDNCSLRPDME----TVVETLVKDVARDLVAVMDVTGSGMLGWTEFKKNQTLVTARLATLREFV 1773
R++G MA+N ++F Q+F + ++ F FD+RG G VDV EV A +F+ + L ++A FDFD + +S E +++ C RG RV + +PE++ + L F+ SNR ++L + W+ + V ++L F R+I ++ L DK + L +++ + S W+ D + G S + C + +V+ A ++ + + G V+A L L +AF D+D +V + +L+ LLWL +EP + + +D+ ++G ++ MEW+ + + +D+ TG++ ++ L +F D + +GSI + + ++ V+ V +C + ++ +++ ++ +A++++ +DV S + W EFK + + R+A ++ +V
Sbjct: 3 REYGDI-MAVNQDQFDQLFSVVCSDTAVHFQEFDSRGVGRVDVLEVLAVLIVFSKDLIEPKIQALFSLYASFDFDKSCYISHTELVMLMICCTRGLCRVVGLERPENL--ELECLANEAFAKIDSNRN---NRVSLSEFSFWLHHEQSVILYLKKFASTRLIADAMLLYDKQLKLAIDLFLAAAVVRLSLLWDSPYSMRTDKSSLGNS--SEGAVSYPACTLVQVRSVIVALKLRHLQPVDVDEVIGYMTHMVEANEESTNPVIVLPNFLSVMSPALAFFAADDDHSMTVDVHELRILLWL---MRKKEPTDLQTKGMLLALDDDENGKLSCMEWVHYASGNERSTDTSIDQSTGSLAFNAQLRYLFEHCDREGNGSIHVADFSAGLKTVVTRFSLLVQYGGIHCIILYEVGDKKWAIIDDMLASLAKEIMDCVDVNNSKTIEWKEFKAHLEFIEDRVAKVKSYV 456
BLAST of mRNA_E-fasciculatus_F_contig16.4105.1 vs. uniprot
Match: A0A397FXD3_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A397FXD3_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 2.710e-9 Identity = 60/244 (24.59%), Postives = 104/244 (42.62%), Query Frame = 1
Query: 427 KASLEDVSECLLRRD---RDFGHYKMAINSEEFRQVFEGILTNPTELFSVFDNRGKGLVDVSEVFASAFLFAAGTPKGLDAKLEKMFALFDFDGNGALSDVEAEIMLECVVRGASRVAMMPQPEDVLDSIGKLTTSLFSH--SNRGATAGELTLRDLKDWISEREDVAVFLSNFIEARMIISSLELVDKSVALGMNMCKHPSPQDDSWEHTDGTVDGARAGEMLRSLTTLGKTECLRAGLETVV 1143
K L ++ + + D R++G MA+N ++F Q+F + + F FD+RG G VDV EV A +F+ + L ++A FDFD + +S E +++ C RG RV P L+ + L F+ SNR ++L + W+ + V ++L + +L K + L ++ ++ W H +D + + AGL+TVV
Sbjct: 58 KVQLREIRQVIQNYDDMQREYGDI-MAVNQDQFDQLFSVVCRDTAVHFQEFDSRGVGRVDVLEVLAVLIVFSKDLIEPKIQALFSLYASFDFDKSCYISHTELVMLMICCTRGLCRVVGYESPTQNLE-LECLANEAFAKIDSNRN---NRVSLSEFSFWLHHEQSVILYLKILLWLMRKKEPTDLQTKGMLLALDDDENGKLSCMEWVHYASGIDQSTGSLAFNAQLRYLFEHYFSAGLKTVV 296 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16.4105.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig16.4105.1 >prot_E-fasciculatus_F_contig16.4105.1 ID=prot_E-fasciculatus_F_contig16.4105.1|Name=mRNA_E-fasciculatus_F_contig16.4105.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=516bp MGNEVSRTTAAQQSHGGRKARINIDSPYAEDFQKASLEDVSECLLRRDRDback to top mRNA from alignment at E-fasciculatus_F_contig16:6461..16729+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig16.4105.1 ID=mRNA_E-fasciculatus_F_contig16.4105.1|Name=mRNA_E-fasciculatus_F_contig16.4105.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=10269bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16:6461..16729+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16:6461..16729+ >mRNA_E-fasciculatus_F_contig16.4105.1 ID=mRNA_E-fasciculatus_F_contig16.4105.1|Name=mRNA_E-fasciculatus_F_contig16.4105.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3096bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16:6461..16729+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |