mRNA_E-fasciculatus_F_contig15984.4098.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15984.4098.1 vs. uniprot
Match: D8LIL5_ECTSI (Cyclin D1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIL5_ECTSI) HSP 1 Score: 206 bits (524), Expect = 1.630e-64 Identity = 95/100 (95.00%), Postives = 97/100 (97.00%), Query Frame = 1
Query: 1 QGVTAPDDTCQGRRLVEKVVTYMNKYVDFFANLCQQGYQFQRYKPSHIAATAILAARRALCIKPMWRDELTELTGYKLEDISDCGEDLWSFYEKMFPLHR 300
QGVTAPDDTCQGRRLVEKVVTYMNKYVDFFANLCQQGYQFQRYKPSHIAA AIL ARRALCIKPMWRDELT+LTGYKLE+ISDCGEDLW FYEKMFPLHR
Sbjct: 184 QGVTAPDDTCQGRRLVEKVVTYMNKYVDFFANLCQQGYQFQRYKPSHIAAAAILTARRALCIKPMWRDELTDLTGYKLEEISDCGEDLWHFYEKMFPLHR 283
BLAST of mRNA_E-fasciculatus_F_contig15984.4098.1 vs. uniprot
Match: A0A835ZBR6_9STRA (Cyclin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBR6_9STRA) HSP 1 Score: 140 bits (354), Expect = 1.780e-39 Identity = 68/112 (60.71%), Postives = 79/112 (70.54%), Query Frame = 1
Query: 1 QGVTAPDDTCQGRRLVEKVVTYMNKYVDFFANLCQQGYQFQRYKPSHIAATAILAARRALCIKPMWRDELTELTGYKLEDISDCGEDLWSFYEKMFPLHRVSEMRPPGMSPE 336
QGVT D CQGR LV KV YM KYV+FFANLCQQ Y FQR++PS IAA +ILAARRALCI P+WR EL LTG DI C E++W+FYE MFP H+ +R G P+
Sbjct: 125 QGVTFLSDECQGRALVTKVTRYMKKYVEFFANLCQQDYSFQRHRPSTIAAASILAARRALCIAPLWRPELERLTGCAPRDIQACAEEVWAFYEAMFPTHQP--LRTSGSEPK 234
BLAST of mRNA_E-fasciculatus_F_contig15984.4098.1 vs. uniprot
Match: A0A7S2FS20_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FS20_9STRA) HSP 1 Score: 100 bits (249), Expect = 1.970e-24 Identity = 44/99 (44.44%), Postives = 61/99 (61.62%), Query Frame = 1
Query: 1 QGVTAPDDTCQGRRLVEKVVTYMNKYVDFFANLCQQGYQFQRYKPSHIAATAILAARRALCIKPMWRDELTELTGYKLEDISDCGEDLWSFYEKMFPLH 297
+GV DD+ GR L++K+ Y+ KY +FFANLC Q Y +Q++ PS +AA + +AR AL + P+WR EL ELTG+ ED +W Y FP H
Sbjct: 47 RGVVFKDDSWNGRALIDKIPRYVQKYTEFFANLCMQDYLYQQFSPSLLAAAIVYSARHALSVAPLWRPELEELTGHCTEDAHQVFLKIWGLYSDTFPAH 145
BLAST of mRNA_E-fasciculatus_F_contig15984.4098.1 vs. uniprot
Match: A0A1Z5JHV1_FISSO (Cyclin N-terminal domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JHV1_FISSO) HSP 1 Score: 102 bits (254), Expect = 7.500e-24 Identity = 49/106 (46.23%), Postives = 64/106 (60.38%), Query Frame = 1
Query: 1 QGVTAPDDTCQGRRLVEKVVTYMNKYVDFFANLCQQGYQFQRYKPSHIAATAILAARRALCIKPMWRDELTELTGYKLEDISDCGEDLWSFYEKMFPLHRVSEMRP 318
+G DD QGR L+ K+ Y+ KY +FF NL Q Y FQ+Y+PS +AA A++A+R AL I+P WR EL TGY DI LWS+YE+ FP H + P
Sbjct: 209 KGACFVDDAWQGRHLIPKIPRYLKKYAEFFCNLALQDYSFQQYRPSILAAAAVMASRVALQIEPKWRPELVRRTGYDEFDILPIFNHLWSYYEEQFPGHVSRSISP 314
BLAST of mRNA_E-fasciculatus_F_contig15984.4098.1 vs. uniprot
Match: A0A2D4BMH4_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMH4_PYTIN) HSP 1 Score: 102 bits (254), Expect = 1.140e-23 Identity = 50/112 (44.64%), Postives = 70/112 (62.50%), Query Frame = 1
Query: 1 QGVTAPDDTCQGRRLVEKVVTYMNKYVDFFANLCQQGYQFQRYKPSHIAATAILAARRALCIKPMWRDELTELTGYKLEDISDCGEDLWSFYEKMFPLHRVSE--MRPPGMS 330
Q V +D QG +VE+ + Y KY DFF +LC Q YQFQ Y+PS +AA+ + A+R+AL + P+WR+ELTELTGY E + C +W+ Y K F SE + P G++
Sbjct: 231 QPVLFTNDEIQGTDMVEEALEYYRKYADFFVDLCLQSYQFQAYRPSLVAASILAASRKALGMTPLWREELTELTGYSPEQVEPCFIAVWTHYVKTFGDKSASEKEISPTGVA 342
BLAST of mRNA_E-fasciculatus_F_contig15984.4098.1 vs. uniprot
Match: A0A5D6XV07_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XV07_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 5.730e-21 Identity = 48/112 (42.86%), Postives = 66/112 (58.93%), Query Frame = 1
Query: 1 QGVTAPDDTCQGRRLVEKVVTYMNKYVDFFANLCQQGYQFQRYKPSHIAATAILAARRALCIKPMWRDELTELTGYKLEDISDCGEDLWSFYEKMFPLHRVSEMR--PPGMS 330
Q V DD QG +VE+ + Y +KY +FF +LC Q YQFQ Y+PS +AA + +R+AL + P+WR+ELT LTGY E + C LW+ Y F S M P G++
Sbjct: 180 QSVLFCDDEIQGASMVEEALEYYHKYNEFFVDLCLQEYQFQAYRPSLVAAAILAVSRKALGMAPLWREELTVLTGYGEEQVEPCFCALWAHYVASFGDKHASGMESSPTGVA 291
BLAST of mRNA_E-fasciculatus_F_contig15984.4098.1 vs. uniprot
Match: A0A2E3DBF1_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E3DBF1_9GAMM) HSP 1 Score: 91.7 bits (226), Expect = 7.450e-20 Identity = 41/97 (42.27%), Postives = 59/97 (60.82%), Query Frame = 1
Query: 1 QGVTAPDDTCQGRRLVEKVVTYMNKYVDFFANLCQQGYQFQRYKPSHIAATAILAARRALCIKPMWRDELTELTGYKLEDISDCGEDLWSFYEKMFP 291
QGV P D G +VV Y+ +Y DFFA+LC Q Y FQR++ S A + ++RRA+ I+P+W D L ++T Y E +S+C + +W Y K FP
Sbjct: 190 QGVIYPTDKMAGNPCNNRVVKYLRRYTDFFADLCLQDYSFQRFRESVKGAAFLYSSRRAMSIEPIWPDRLVQITTYTEEALSECAKAVWDCYRKNFP 286
BLAST of mRNA_E-fasciculatus_F_contig15984.4098.1 vs. uniprot
Match: A0A3F2RXS3_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RXS3_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 3.050e-18 Identity = 43/113 (38.05%), Postives = 66/113 (58.41%), Query Frame = 1
Query: 1 QGVTAPDDTCQGRRLVEKVVTYMNKYVDFFANLCQQGYQFQRYKPSHIAATAILAARRALCIKPMWRDELTELTGYKLEDISDCGEDLWSFYEKMFPLHRVSEMR---PPGMS 330
Q V DD G LV++ Y KY +FF +L Q Y Q Y+PS +AA+ ++A+R+AL + P+WRDEL+ LTGY E ++ C + +W +E F + +R P G++
Sbjct: 198 QTVLFADDRVMGSELVDEAHDYYCKYAEFFVDLVLQEYSLQVYRPSVVAASILVASRKALGVTPLWRDELSVLTGYDEEQVAPCFQAVWEHFETTFGPRNKTNVRDDSPAGVA 310
BLAST of mRNA_E-fasciculatus_F_contig15984.4098.1 vs. uniprot
Match: A0A662XH55_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XH55_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 3.510e-18 Identity = 43/102 (42.16%), Postives = 63/102 (61.76%), Query Frame = 1
Query: 1 QGVTAPDDTCQGRRLVEKVVTYMNKYVDFFANLCQQGYQFQRYKPSHIAATAILAARRALCIKPMWRDELTELTGYKLEDISDCGEDLWSFYEKMF-PLHRV 303
Q V DD G LV++ Y KY +FF +L Q Y Q Y+PS +AA+ ++AAR+AL + P+WRDEL+ LTGY ++ C + +WS +E F PL++
Sbjct: 210 QTVLFADDRLLGSELVDEAHGYYCKYAEFFVDLVLQEYSLQVYRPSVVAASILVAARKALDVTPLWRDELSALTGYDEAQVAPCFQAVWSHFEATFGPLNKA 311
BLAST of mRNA_E-fasciculatus_F_contig15984.4098.1 vs. uniprot
Match: A0A6H5KXG3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXG3_9PHAE) HSP 1 Score: 82.0 bits (201), Expect = 4.540e-18 Identity = 34/38 (89.47%), Postives = 37/38 (97.37%), Query Frame = 1
Query: 193 MWRDELTELTGYKLEDISDCGEDLWSFYEKMFPLHRVS 306
MWRDELT+LTGYKLE+ISDCGEDLW FYEKMFPLHRV+
Sbjct: 1 MWRDELTDLTGYKLEEISDCGEDLWHFYEKMFPLHRVA 38 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15984.4098.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15984.4098.1 >prot_E-fasciculatus_F_contig15984.4098.1 ID=prot_E-fasciculatus_F_contig15984.4098.1|Name=mRNA_E-fasciculatus_F_contig15984.4098.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=117bp QGVTAPDDTCQGRRLVEKVVTYMNKYVDFFANLCQQGYQFQRYKPSHIAAback to top mRNA from alignment at E-fasciculatus_F_contig15984:1466..2582- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15984.4098.1 ID=mRNA_E-fasciculatus_F_contig15984.4098.1|Name=mRNA_E-fasciculatus_F_contig15984.4098.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1117bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15984:1466..2582- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15984:1466..2582- >mRNA_E-fasciculatus_F_contig15984.4098.1 ID=mRNA_E-fasciculatus_F_contig15984.4098.1|Name=mRNA_E-fasciculatus_F_contig15984.4098.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=702bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15984:1466..2582- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |