mRNA_E-fasciculatus_F_contig15976.4092.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15976.4092.1 vs. uniprot
Match: D7G9B9_ECTSI (Alpha-1,3/1,6-mannosyltransferase ALG2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9B9_ECTSI) HSP 1 Score: 162 bits (411), Expect = 3.800e-46 Identity = 78/80 (97.50%), Postives = 80/80 (100.00%), Query Frame = 1
Query: 1 GGYDKRVPENVDHLSELKACAARLGLDSLVEFRTNVADDARAELLRQASCVLYTPSREHFGIVPVESMCCGAPVIAVNSG 240
GGYDKRVPENVDHLSEL+ACAARLGLDSLVEFRTNVADDARAELLRQASCVLYTPSREHFGIVPVE+MCCGAPVIAVNSG
Sbjct: 330 GGYDKRVPENVDHLSELEACAARLGLDSLVEFRTNVADDARAELLRQASCVLYTPSREHFGIVPVEAMCCGAPVIAVNSG 409
BLAST of mRNA_E-fasciculatus_F_contig15976.4092.1 vs. uniprot
Match: A0A7S4JC65_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JC65_9STRA) HSP 1 Score: 101 bits (251), Expect = 9.290e-26 Identity = 49/78 (62.82%), Postives = 57/78 (73.08%), Query Frame = 1
Query: 7 YDKRVPENVDHLSELKACAARLGLDSLVEFRTNVADDARAELLRQASCVLYTPSREHFGIVPVESMCCGAPVIAVNSG 240
YD R PENV+HLSEL+ AA L + S FR NV+D RA LLR A CV YTP REHFGIVP+E+M G+PV+AV SG
Sbjct: 1 YDPRNPENVEHLSELRTLAADLDISSRASFRPNVSDAERARLLRSALCVAYTPHREHFGIVPLEAMYAGSPVVAVKSG 78
BLAST of mRNA_E-fasciculatus_F_contig15976.4092.1 vs. uniprot
Match: A0A7S4JCA0_9STRA (Alpha-1,3/1,6-mannosyltransferase ALG2 (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JCA0_9STRA) HSP 1 Score: 107 bits (267), Expect = 1.790e-25 Identity = 51/80 (63.75%), Postives = 60/80 (75.00%), Query Frame = 1
Query: 1 GGYDKRVPENVDHLSELKACAARLGLDSLVEFRTNVADDARAELLRQASCVLYTPSREHFGIVPVESMCCGAPVIAVNSG 240
GGYD R PENV+HLSEL+ AA LG+ + FR NV+D RA LLR A CV YTP REHFGIVP+E+M G+PV+AV SG
Sbjct: 395 GGYDPRNPENVEHLSELRTLAADLGISARASFRPNVSDAERARLLRSALCVAYTPHREHFGIVPLEAMYAGSPVVAVKSG 474
BLAST of mRNA_E-fasciculatus_F_contig15976.4092.1 vs. uniprot
Match: UPI0018653D70 (alpha-1,3/1,6-mannosyltransferase ALG2 n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI0018653D70) HSP 1 Score: 105 bits (261), Expect = 5.010e-25 Identity = 50/80 (62.50%), Postives = 60/80 (75.00%), Query Frame = 1
Query: 1 GGYDKRVPENVDHLSELKACAARLGLDSLVEFRTNVADDARAELLRQASCVLYTPSREHFGIVPVESMCCGAPVIAVNSG 240
GGYD+RVPENV+H +ELKA A+ LGLD V F + +D + LL ++CVLYTPS EHFGIVPVE+M PVIAVNSG
Sbjct: 254 GGYDERVPENVEHYAELKALASSLGLDDSVTFLRSFSDQQKVSLLHHSTCVLYTPSNEHFGIVPVEAMYTRCPVIAVNSG 333
BLAST of mRNA_E-fasciculatus_F_contig15976.4092.1 vs. uniprot
Match: A0A7J7JTW2_BUGNE (ALG2 n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7JTW2_BUGNE) HSP 1 Score: 100 bits (248), Expect = 5.900e-25 Identity = 50/80 (62.50%), Postives = 59/80 (73.75%), Query Frame = 1
Query: 1 GGYDKRVPENVDHLSELKACAARLGLDSLVEFRTNVADDARAELLRQASCVLYTPSREHFGIVPVESMCCGAPVIAVNSG 240
GGYD RV ENV+H EL+ AA L LD+LV F +V+DD + LL A+C+LYTP REHFGIVPVE+M PVIAVNSG
Sbjct: 19 GGYDDRVTENVEHYLELRKLAADLKLDNLVTFLCSVSDDDKLALLSAATCLLYTPDREHFGIVPVEAMYLRCPVIAVNSG 98
BLAST of mRNA_E-fasciculatus_F_contig15976.4092.1 vs. uniprot
Match: UPI001B7EC84D (alpha-1,3/1,6-mannosyltransferase ALG2-like n=1 Tax=Polyodon spathula TaxID=7913 RepID=UPI001B7EC84D) HSP 1 Score: 100 bits (250), Expect = 8.670e-25 Identity = 48/80 (60.00%), Postives = 57/80 (71.25%), Query Frame = 1
Query: 1 GGYDKRVPENVDHLSELKACAARLGLDSLVEFRTNVADDARAELLRQASCVLYTPSREHFGIVPVESMCCGAPVIAVNSG 240
GGYD+RVPENVDH ELK + +LGL V F + +D+ + LL +CVLYTPS EHFGIVPVE+M PVIAVNSG
Sbjct: 64 GGYDERVPENVDHYMELKDLSTKLGLSDSVTFLRSFSDEQKISLLHHCTCVLYTPSNEHFGIVPVEAMYMRCPVIAVNSG 143
BLAST of mRNA_E-fasciculatus_F_contig15976.4092.1 vs. uniprot
Match: A0A8J5J836_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J836_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.370e-23 Identity = 50/80 (62.50%), Postives = 61/80 (76.25%), Query Frame = 1
Query: 1 GGYDKRVPENVDHLSELKACAARLGLDSLVEFRTNVADDARAELLRQASCVLYTPSREHFGIVPVESMCCGAPVIAVNSG 240
GGYD EN +HL EL+ AA+ GL+ VEFRT+V++ + ELLRQA +LYTP REHFGIVPVE+M CG PVIAV+SG
Sbjct: 1079 GGYDPLNTENKEHLIELQDVAAKHGLEEHVEFRTSVSNFMKLELLRQAHAILYTPDREHFGIVPVEAMACGTPVIAVSSG 1158
BLAST of mRNA_E-fasciculatus_F_contig15976.4092.1 vs. uniprot
Match: A0A7S2MEI2_9STRA (Alpha-1,3/1,6-mannosyltransferase ALG2 n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MEI2_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.840e-23 Identity = 49/80 (61.25%), Postives = 57/80 (71.25%), Query Frame = 1
Query: 1 GGYDKRVPENVDHLSELKACAARLGLDSLVEFRTNVADDARAELLRQASCVLYTPSREHFGIVPVESMCCGAPVIAVNSG 240
GGYD R ENV HLSELK A L + V+F NV D R+ LL+ A CV+YTP REHFGIVP+E+M G+PVIAVNSG
Sbjct: 77 GGYDPRNIENVQHLSELKHLATNLQISDKVQFAPNVNDTQRSSLLKNALCVVYTPHREHFGIVPLEAMYAGSPVIAVNSG 156
BLAST of mRNA_E-fasciculatus_F_contig15976.4092.1 vs. uniprot
Match: UPI001CFA5708 (alpha-1,3/1,6-mannosyltransferase ALG2 n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFA5708) HSP 1 Score: 100 bits (250), Expect = 1.870e-23 Identity = 48/80 (60.00%), Postives = 60/80 (75.00%), Query Frame = 1
Query: 1 GGYDKRVPENVDHLSELKACAARLGLDSLVEFRTNVADDARAELLRQASCVLYTPSREHFGIVPVESMCCGAPVIAVNSG 240
GGYD+RV ENV+H ELK ++LGL S V F + +D+ + LL Q++CVLYTPS EHFGIVP+E+M C PVIAVNSG
Sbjct: 254 GGYDERVTENVEHYKELKDTTSQLGLSSHVTFIRSFSDEQKKLLLHQSTCVLYTPSNEHFGIVPLEAMYCRCPVIAVNSG 333
BLAST of mRNA_E-fasciculatus_F_contig15976.4092.1 vs. uniprot
Match: A0A3P8XUC1_ESOLU (Alpha-1,3/1,6-mannosyltransferase ALG2 n=2 Tax=Esox lucius TaxID=8010 RepID=A0A3P8XUC1_ESOLU) HSP 1 Score: 100 bits (250), Expect = 2.400e-23 Identity = 49/80 (61.25%), Postives = 61/80 (76.25%), Query Frame = 1
Query: 1 GGYDKRVPENVDHLSELKACAARLGLDSLVEFRTNVADDARAELLRQASCVLYTPSREHFGIVPVESMCCGAPVIAVNSG 240
GGYD RV ENV H +ELK AA+LG+D+ V F + +D + LLR ++ VLYTPSREHFGIVP+E+M CG PVIAV+SG
Sbjct: 283 GGYDGRVIENVQHYTELKELAAQLGVDNSVTFLRSPSDSQKVALLRGSAAVLYTPSREHFGIVPLEAMHCGCPVIAVSSG 362 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15976.4092.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15976.4092.1 >prot_E-fasciculatus_F_contig15976.4092.1 ID=prot_E-fasciculatus_F_contig15976.4092.1|Name=mRNA_E-fasciculatus_F_contig15976.4092.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=80bp GGYDKRVPENVDHLSELKACAARLGLDSLVEFRTNVADDARAELLRQASCback to top mRNA from alignment at E-fasciculatus_F_contig15976:399..1477- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15976.4092.1 ID=mRNA_E-fasciculatus_F_contig15976.4092.1|Name=mRNA_E-fasciculatus_F_contig15976.4092.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1079bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15976:399..1477- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15976:399..1477- >mRNA_E-fasciculatus_F_contig15976.4092.1 ID=mRNA_E-fasciculatus_F_contig15976.4092.1|Name=mRNA_E-fasciculatus_F_contig15976.4092.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=480bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15976:399..1477- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |