mRNA_E-fasciculatus_F_contig1597.4089.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1597.4089.1
Unique NamemRNA_E-fasciculatus_F_contig1597.4089.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1597.4089.1 vs. uniprot
Match: A0A6H5K487_9PHAE (SPDS protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K487_9PHAE)

HSP 1 Score: 578 bits (1490), Expect = 2.110e-208
Identity = 281/293 (95.90%), Postives = 288/293 (98.29%), Query Frame = 1
Query:    1 MSIKDGWFSETEVLWPGQKFSLEVKEVLFHQRSDFQDVLVFDSVHYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAQGDPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSMVCEVAKRFEFCTASAFGDARLKLVHEDAAEFVTKEGNNGYDVIIVDSSDPVGPAETLFQPSFYQNMKQALAPMGVIATQGECLWLHLPLITTVLRACAEIFGSVDYAFTTVPSYPSGQIGFVLASVEERDLSTPTATPNAAMTEVLRYYSPEVHKAAFVLPVFAEKEIASARRRSSNE 879
            MSIKDGWFSETEVLWPGQKFSLEVKEVLFH+RSDFQDVLVFDSVHYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAQGDPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDS+VCEV++RFEFCTASAFGDARLKLVHEDAAEFV KEGN+GYDVIIVDSSDPVGPAETLFQPSFYQNMKQALAPMGVIATQGECLWLHLPLITTVLRACAEIFGSVDYAFTTVPSYPSGQIGFVLASVEERDLSTP +TPNAAMTEVLRYYSPEVH+AAFVLPVFAEKEIA  RRRSS E
Sbjct:    1 MSIKDGWFSETEVLWPGQKFSLEVKEVLFHERSDFQDVLVFDSVHYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAQGDPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSVVCEVSRRFEFCTASAFGDARLKLVHEDAAEFVKKEGNSGYDVIIVDSSDPVGPAETLFQPSFYQNMKQALAPMGVIATQGECLWLHLPLITTVLRACAEIFGSVDYAFTTVPSYPSGQIGFVLASVEERDLSTPASTPNAAMTEVLRYYSPEVHRAAFVLPVFAEKEIAGVRRRSSKE 293          
BLAST of mRNA_E-fasciculatus_F_contig1597.4089.1 vs. uniprot
Match: A0A835ZDK7_9STRA (Spermidine/spermine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDK7_9STRA)

HSP 1 Score: 445 bits (1145), Expect = 7.190e-156
Identity = 210/291 (72.16%), Postives = 248/291 (85.22%), Query Frame = 1
Query:    1 MSIKDGWFSETEVLWPGQKFSLEVKEVLFHQRSDFQDVLVFDSVHYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAQGDPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSMVCEVAKRFEFCTASAFGDARLKLVHEDAAEFVTKEGNNGYDVIIVDSSDPVGPAETLFQPSFYQNMKQALAPMGVIATQGECLWLHLPLITTVLRACAEIFGSVDYAFTTVPSYPSGQIGFVLASVEERDLSTPTATPNAAMTEVLRYYSPEVHKAAFVLPVFAEKEIASARRRSS 873
            MSI +GWFSE E +WPGQKFSL+V++VLFH++SDFQDVLVF S  YGKVLVLDGVIQ+TERDE +YQEMLTHIPCFA   PK+VLIVGGGDGG+LREVARH  VE I MCEID MVC+V+K+FEF TA+AFGD RL+LVHEDAAEFV +EGN  YDVIIVDSSDPVGPAETLF+P F+ +MK AL+P G++ATQGECLWLHL LI  VL +CA  F S++YAFTT+P+YPSGQIGFV+ S  ERDLSTP   P+AAM + LRYYSP VH++AFVLP FAE+E+++ R+R S
Sbjct:    1 MSITNGWFSEVEAMWPGQKFSLQVEKVLFHEKSDFQDVLVFQSATYGKVLVLDGVIQVTERDEFAYQEMLTHIPCFAHPHPKRVLIVGGGDGGILREVARHACVENIDMCEIDPMVCDVSKKFEFSTATAFGDPRLRLVHEDAAEFVKREGNGQYDVIIVDSSDPVGPAETLFKPEFFLSMKNALSPGGIVATQGECLWLHLKLIRGVLESCASTFTSLEYAFTTMPTYPSGQIGFVVGSTAERDLSTPAREPDAAMAQDLRYYSPAVHRSAFVLPAFAEREVSAVRKRFS 291          
BLAST of mRNA_E-fasciculatus_F_contig1597.4089.1 vs. uniprot
Match: A0A6V1NMD1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NMD1_HETAK)

HSP 1 Score: 372 bits (956), Expect = 1.800e-126
Identity = 182/290 (62.76%), Postives = 222/290 (76.55%), Query Frame = 1
Query:    7 IKDGWFSETEVLWPGQKFSLEVKEVLFHQRSDFQDVLVFDSVHYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAQGDPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSMVCEVAKR-FEFCTASAFGDARLKLVHEDAAEFVTKEGNNGYDVIIVDSSDPVGPAETLFQPSFYQNMKQALAPMGVIATQGECLWLHLPLITTVLRACAEIFGSVDYAFTTVPSYPSGQIGFVLASVEERD--LSTPTATPNAAMTEVLRYYSPEVHKAAFVLPVFAEKEIASARRR 867
            +K+GWFSE+EV+WPGQKFSL+V+EV+FHQ+SD+QDVLVF S  YG VLVLDGVIQLTERDE +YQEM+TH+P FA  +PKKVLI+GGGDGGVLREV +HP VE I MCEID +V + AK  F   TA+A+ D RL LV  DAAE++ +EG+  YDVI+ DSSDPVGPAE+LFQP+FY+ M  AL P G+  TQGEC WLHL LI  V+ ACA +F  V+Y +TT+P+YPSGQIGFVL S   +D  L++P   P A M   LRYY P VH+AAFVLP FA   +  AR +
Sbjct:   24 VKNGWFSESEVMWPGQKFSLQVEEVVFHQKSDYQDVLVFKSSTYGMVLVLDGVIQLTERDEFAYQEMITHLPMFAHPNPKKVLIIGGGDGGVLREVVKHPTVEKIDMCEIDDVVIQCAKDYFGESTATAYADPRLNLVQGDAAEYIRREGHERYDVIVCDSSDPVGPAESLFQPAFYEAMANALEPGGITCTQGECQWLHLELIEKVVAACASLFNQVEYGYTTIPTYPSGQIGFVLCSNNPQDGALTSPRRAPPAGMA--LRYYRPAVHRAAFVLPAFAHAAVQRARAK 311          
BLAST of mRNA_E-fasciculatus_F_contig1597.4089.1 vs. uniprot
Match: H3GAD3_PHYRM (PABS domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=H3GAD3_PHYRM)

HSP 1 Score: 370 bits (949), Expect = 4.730e-126
Identity = 172/291 (59.11%), Postives = 232/291 (79.73%), Query Frame = 1
Query:    1 MSIKDGWFSETEVLWPGQKFSLEVKEVLFHQRSDFQDVLVFDSVHYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAQGDPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSMVCEVAKRF-EFCTASAFGDARLKLVHEDAAEFVTKEGNNGYDVIIVDSSDPVGPAETLFQPSFYQNMKQALAPMGVIATQGECLWLHLPLITTVLRACAEIFGSVDYAFTTVPSYPSGQIGFVLASVEERD--LSTPTATPNAAMTEVLRYYSPEVHKAAFVLPVFAEKEIASARR 864
            MS +  WFSETE +WPGQKFSL+++EVLF  +SDFQDVLVF S  YG VLVLDGVIQLTERDE +YQEM+TH+P FA   PK+VLIVGGGDGGVLREV +H  V+ + MCEID+MVC+V+K+F +   A+AF D R+ L+H DAA ++ +  ++ +DV+IVDSSDPVGPAE L++  FY+NMK +L+P GVI TQGECLWLHL LI  V++ C  +F +V+Y++TT+P+YPSGQIGF++ S+++ +  L+ P  TP+A M + LRYY+P++H+A+FVLP FAE++I + R+
Sbjct:    1 MSTEKQWFSETEAMWPGQKFSLQMEEVLFQGKSDFQDVLVFKSATYGNVLVLDGVIQLTERDEFAYQEMITHLPMFAHKQPKRVLIVGGGDGGVLREVTKHDCVQEVVMCEIDAMVCDVSKQFFKDTVATAFDDPRVTLLHADAAVYLRENTSDKFDVVIVDSSDPVGPAEVLYRAEFYENMKNSLSPDGVICTQGECLWLHLDLIVEVMQRCQNLFPTVNYSYTTIPTYPSGQIGFIMCSLDDSEGVLAKPKRTPDAKMEQTLRYYNPKIHEASFVLPSFAERKIVAVRK 291          
BLAST of mRNA_E-fasciculatus_F_contig1597.4089.1 vs. uniprot
Match: A0A225VS69_9STRA (Spermidine synthase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VS69_9STRA)

HSP 1 Score: 369 bits (948), Expect = 6.710e-126
Identity = 174/291 (59.79%), Postives = 233/291 (80.07%), Query Frame = 1
Query:    1 MSIKDGWFSETEVLWPGQKFSLEVKEVLFHQRSDFQDVLVFDSVHYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAQGDPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSMVCEVAKRFEFCT-ASAFGDARLKLVHEDAAEFVTKEGNNGYDVIIVDSSDPVGPAETLFQPSFYQNMKQALAPMGVIATQGECLWLHLPLITTVLRACAEIFGSVDYAFTTVPSYPSGQIGFVLASVEERD--LSTPTATPNAAMTEVLRYYSPEVHKAAFVLPVFAEKEIASARR 864
            M+ +  WFSETE +WPGQKFSLE++EVLF  +SDFQDVLVF S  YG VLVLDGVIQ+TERDE +YQEM+ H+P FA   PK+VL+VGGGDGGV+RE+ +H  VE I  CEIDSMVC+V+KRF   T A+AF D R+KL+H DAA ++ +  ++ +DV+IVDSSDPVGPAE L++  FY++MK++L+P GVIATQGECLWLHL LI  V++ C  +F +VDY++TT+P+YPSGQIGF++ S+ + +  L+ P  +P+A M + LRYYS ++H+A+FVLP FAE++IA+AR+
Sbjct:    1 MATEKQWFSETEAMWPGQKFSLEIEEVLFQGKSDFQDVLVFKSATYGNVLVLDGVIQVTERDEFAYQEMIAHLPLFAHKQPKRVLVVGGGDGGVVREIVKHECVEEIVWCEIDSMVCDVSKRFFKDTLATAFDDPRVKLLHADAAIYLRENTSDKFDVVIVDSSDPVGPAEVLYRAEFYESMKKSLSPDGVIATQGECLWLHLDLIVDVMQRCQNLFPTVDYSYTTIPTYPSGQIGFIMCSLNKSEGGLAKPKRSPDAKMEQTLRYYSSKIHEASFVLPSFAERKIATARK 291          
BLAST of mRNA_E-fasciculatus_F_contig1597.4089.1 vs. uniprot
Match: A0A3M6VRP9_9STRA (PABS domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VRP9_9STRA)

HSP 1 Score: 367 bits (943), Expect = 4.440e-125
Identity = 170/285 (59.65%), Postives = 227/285 (79.65%), Query Frame = 1
Query:   19 WFSETEVLWPGQKFSLEVKEVLFHQRSDFQDVLVFDSVHYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAQGDPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSMVCEVAKRF-EFCTASAFGDARLKLVHEDAAEFVTKEGNNGYDVIIVDSSDPVGPAETLFQPSFYQNMKQALAPMGVIATQGECLWLHLPLITTVLRACAEIFGSVDYAFTTVPSYPSGQIGFVLASVEERD--LSTPTATPNAAMTEVLRYYSPEVHKAAFVLPVFAEKEIASARR 864
            WFSETE +WPGQKFS+E+++VLF  +SDFQDVLVF S  YG VLVLDGVIQLTERDE +YQEM+TH+P FA   PK+VLIVGGGDGGVLREV +H  V+ + MCEIDSMVC+V+K+F +   A+AF D R+ L+H DAA ++ +  N+ +DV+IVDSSDPVGPAE L++  FY+NMK++L+P G+I TQGECLWLHL LI  V+  C  +F SV+Y++TT+P+YPSGQIGF++ S+++ +  L  P   P+A M + LRYY+P++H+A+FVLP FAE++I + R+
Sbjct:   11 WFSETEAMWPGQKFSIEIEQVLFKGKSDFQDVLVFKSATYGNVLVLDGVIQLTERDEFAYQEMITHLPMFAHKQPKRVLIVGGGDGGVLREVTKHDCVQEVVMCEIDSMVCDVSKKFFKDTVATAFDDPRVTLLHADAAVYLRENRNDKFDVVIVDSSDPVGPAEVLYRAEFYENMKKSLSPDGIICTQGECLWLHLDLIVDVMTRCQNLFSSVNYSYTTIPTYPSGQIGFIMCSLDDSEGVLIKPKRLPDAKMEQTLRYYNPKIHEASFVLPNFAERKITTVRK 295          
BLAST of mRNA_E-fasciculatus_F_contig1597.4089.1 vs. uniprot
Match: A0A7S2HBD7_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2HBD7_9EUKA)

HSP 1 Score: 369 bits (946), Expect = 5.370e-125
Identity = 181/291 (62.20%), Postives = 220/291 (75.60%), Query Frame = 1
Query:    1 MSIKDGWFSETEVLWPGQKFSLEVKEVLFHQRSDFQDVLVFDSVHYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAQGDPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSMVCEVAKRF-EFCTASAFGDARLKLVHEDAAEFVTKEGNNG-YDVIIVDSSDPVGPAETLFQPSFYQNMKQALAPMGVIATQGECLWLHLPLITTVLRACAEIFGSVDYAFTTVPSYPSGQIGFVLASVEERD-LSTPTATPNAAMTEVLRYYSPEVHKAAFVLPVFAEKEIASARR 864
            M IKDGWF+E EV+WPGQ  SL+V+EVL+  RSDFQDVLVF S  YG VLVLDGVIQ+TERDE +YQEM+THIP     DP+ VLIVGGGDGGVLREV RHPGV+ I MCEID +VC+VAK++    TA AF D R+ LVH DAAE+V K+     YDV+IVDSSDPVGPAE+LF  +FY+ ++ A+ P  ++  QGEC+WLHL LI  VL+ C  +F SVDYAFTT+P+YPSGQIGF++ S      L  P  TP+ A++  L+YYSP VH AAFVLPVFAE  +A+ RR
Sbjct:    1 MPIKDGWFTEAEVMWPGQAMSLKVEEVLYEGRSDFQDVLVFRSATYGTVLVLDGVIQVTERDEHAYQEMITHIPMHCHADPQNVLIVGGGDGGVLREVCRHPGVQKITMCEIDPLVCDVAKQYLSASTAVAFNDPRVTLVHADAAEYVAKDDQRALYDVVIVDSSDPVGPAESLFTETFYKALRVAMRPGAIMCNQGECMWLHLDLIREVLKHCHSVFPSVDYAFTTIPTYPSGQIGFLMCSTSPGQVLRQPVRTPDPAVSASLKYYSPAVHAAAFVLPVFAETAVATVRR 291          
BLAST of mRNA_E-fasciculatus_F_contig1597.4089.1 vs. uniprot
Match: F0YCA3_AURAN (PABS domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCA3_AURAN)

HSP 1 Score: 365 bits (938), Expect = 3.140e-124
Identity = 182/293 (62.12%), Postives = 225/293 (76.79%), Query Frame = 1
Query:   10 KDGWFSETEVLWPGQKFSLEVKEVLFHQRSDFQDVLVFDSVHYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAQGDPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSMVCEVAKRF-EFCTASAFGDARLKLVHEDAA----------EFVTKEGNNGYDVIIVDSSDPVGPAETLFQPSFYQNMKQALAPMGVIATQGECLWLHLPLITTVLRACAEIFGSVDYAFTTVPSYPSGQIGFVLASVEE--RDLSTPTATPNAAMTEVLRYYSPEVHKAAFVLPVFAEKEI 849
            K+ WF+E+EV+WPGQ+FSL+V EVL H RS FQD+LVF S  YG+VLVLDGVIQLTERDE +YQEM+ H+P F+  +PK+VLIVGGGDGGVLREVARH  VETI MCEID+ V EV+K+F    TA+A+GDARL LVH DAA             T  G  GYDVIIVDSSDPVGPAETLF+P+FY +M+ ALAP G + TQGEC+WLHLPLI+ V+ AC ++F +V+YA+T VP+YPSGQIGF++ S++E    L  P   P   + + L+YYSP+VH AAFVLP FAE+E+
Sbjct:    7 KENWFAESEVMWPGQRFSLKVGEVLHHSRSAFQDILVFQSETYGRVLVLDGVIQLTERDEFAYQEMIAHLPLFSHPEPKRVLIVGGGDGGVLREVARHACVETIDMCEIDAGVVEVSKKFFAESTATAYGDARLTLVHADAAADPAVAAALARRQTPGGWPGYDVIIVDSSDPVGPAETLFEPAFYDSMRAALAPGGAVCTQGECMWLHLPLISKVVSACRDLFPTVEYAYTCVPTYPSGQIGFIMCSLDESRHALVKPVRAPVGHLQDQLKYYSPDVHAAAFVLPPFAEREL 299          
BLAST of mRNA_E-fasciculatus_F_contig1597.4089.1 vs. uniprot
Match: A0A0P1ACQ1_PLAHL (Spermidine synthase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ACQ1_PLAHL)

HSP 1 Score: 365 bits (937), Expect = 3.260e-124
Identity = 175/283 (61.84%), Postives = 225/283 (79.51%), Query Frame = 1
Query:   19 WFSETEVLWPGQKFSLEVKEVLFHQRSDFQDVLVFDSVHYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAQGDPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSMVCEVAKRFEFCT-ASAFGDARLKLVHEDAAEFVTKEGNNGYDVIIVDSSDPVGPAETLFQPSFYQNMKQALAPMGVIATQGECLWLHLPLITTVLRACAEIFGSVDYAFTTVPSYPSGQIGFVLASVEERDLSTPTATPNAAMTEVLRYYSPEVHKAAFVLPVFAEKEIASARR 864
            WFSETE +WPGQKF+L+V++VLF  +SDFQDVLVF S  YG VLVLDGVIQLTERDE +YQEM+TH+P FA   PK+VLIVGGGDGGVLREV +H  VE I MCEIDSMVC+V+K+F   T A+AF D R+ L+H DAA ++ +   N +DV+IVDSSDPVGPAE L++  FYQ+MK AL+P GVI TQGECLWLHL LI  V++ C  +F +V+YA++T+P+YPSGQIGF++ S   + +  P  TP+A M++ LRYYS ++H+A+FVLP FAE++IA+ R+
Sbjct:   11 WFSETEAMWPGQKFALQVEKVLFQGKSDFQDVLVFKSTTYGNVLVLDGVIQLTERDEFAYQEMITHLPMFAHKQPKRVLIVGGGDGGVLREVIKHDCVEEIIMCEIDSMVCDVSKKFFTETVATAFNDPRVTLLHADAALYLHENTTNKFDVVIVDSSDPVGPAEVLYKAEFYQSMKNALSPDGVICTQGECLWLHLDLIVDVMQRCQSLFSTVNYAYSTIPTYPSGQIGFIMCS-SGQSVDKPKRTPDAKMSKTLRYYSAKIHEASFVLPGFAEQKIATVRK 292          
BLAST of mRNA_E-fasciculatus_F_contig1597.4089.1 vs. uniprot
Match: A0A662X3P4_9STRA (PABS domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X3P4_9STRA)

HSP 1 Score: 364 bits (935), Expect = 6.350e-124
Identity = 172/291 (59.11%), Postives = 226/291 (77.66%), Query Frame = 1
Query:    1 MSIKDGWFSETEVLWPGQKFSLEVKEVLFHQRSDFQDVLVFDSVHYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAQGDPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSMVCEVAKR-FEFCTASAFGDARLKLVHEDAAEFVTKEGNNGYDVIIVDSSDPVGPAETLFQPSFYQNMKQALAPMGVIATQGECLWLHLPLITTVLRACAEIFGSVDYAFTTVPSYPSGQIGFVLASVEERD--LSTPTATPNAAMTEVLRYYSPEVHKAAFVLPVFAEKEIASARR 864
            M+ +  WFSETE +WPGQKFSLE++ VLF  +S+FQDVLVF S  YG VLVLDGVIQLTERDE +YQEM+ H+P FA   PK+VLIVGGGDGGVLREV +H  VE + MCEID MVC+V+K+ F    A+AF D RL L+H DAA ++ +     +DV+IVDSSDPVGPAE L++  FYQ+MK +LAP G++ TQGECLWLHL LI  V+  C  IF +++Y++TT+P+YPSGQIGF++ S++E +  L+TP  TP+A M + LRYY+ ++H+A+FVLP FAE++IA+ R+
Sbjct:    1 MAAEKQWFSETEAMWPGQKFSLEMETVLFQGKSNFQDVLVFKSATYGHVLVLDGVIQLTERDEFAYQEMIAHLPLFAHAQPKRVLIVGGGDGGVLREVTKHACVEKVVMCEIDPMVCDVSKKYFGETMATAFEDPRLTLIHADAAVYLRENTEEKFDVMIVDSSDPVGPAEVLYRAEFYQSMKDSLAPNGIVCTQGECLWLHLDLIVDVMSRCQSIFPTINYSYTTIPTYPSGQIGFIMCSLDESEGALATPKRTPDAKMEQTLRYYNAKIHEASFVLPNFAERKIATVRK 291          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1597.4089.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K487_9PHAE2.110e-20895.90SPDS protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
A0A835ZDK7_9STRA7.190e-15672.16Spermidine/spermine synthase n=1 Tax=Tribonema min... [more]
A0A6V1NMD1_HETAK1.800e-12662.76Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
H3GAD3_PHYRM4.730e-12659.11PABS domain-containing protein n=10 Tax=Phytophtho... [more]
A0A225VS69_9STRA6.710e-12659.79Spermidine synthase n=1 Tax=Phytophthora megakarya... [more]
A0A3M6VRP9_9STRA4.440e-12559.65PABS domain-containing protein n=1 Tax=Peronospora... [more]
A0A7S2HBD7_9EUKA5.370e-12562.20Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
F0YCA3_AURAN3.140e-12462.12PABS domain-containing protein n=1 Tax=Aureococcus... [more]
A0A0P1ACQ1_PLAHL3.260e-12461.84Spermidine synthase n=1 Tax=Plasmopara halstedii T... [more]
A0A662X3P4_9STRA6.350e-12459.11PABS domain-containing protein n=2 Tax=Nothophytop... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1597contigE-fasciculatus_F_contig1597:11895..15727 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score580.5
Seed ortholog evalue4.5e-163
Seed eggNOG ortholog2880.D7FKW3
Preferred nameSRM
KEGG rclassRC00003,RC00021,RC00053,RC00060,RC00215,RC00225
KEGG koko:K00293,ko:K00797,ko:K00802,ko:K05353
KEGG ReactionR01153,R01920,R02315,R02869,R08359
KEGG Pathwayko00270,ko00300,ko00310,ko00330,ko00410,ko00480,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00310,map00330,map00410,map00480,map00960,map01100,map01110,map01130,map01230
KEGG ModuleM00030,M00032,M00034,M00133
GOsGO:0003674,GO:0003824,GO:0004766,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006575,GO:0006576,GO:0006595,GO:0006596,GO:0006597,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008215,GO:0008216,GO:0008295,GO:0009058,GO:0009108,GO:0009110,GO:0009308,GO:0009309,GO:0009653,GO:0009987,GO:0010033,GO:0015939,GO:0015940,GO:0016020,GO:0016053,GO:0016740,GO:0016765,GO:0016768,GO:0017144,GO:0019752,GO:0030587,GO:0031150,GO:0031154,GO:0031288,GO:0032502,GO:0032787,GO:0034097,GO:0034641,GO:0036360,GO:0042221,GO:0042364,GO:0042398,GO:0042401,GO:0042802,GO:0042803,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046983,GO:0048856,GO:0050896,GO:0051186,GO:0051188,GO:0051703,GO:0051704,GO:0051716,GO:0070887,GO:0071310,GO:0071345,GO:0071704,GO:0071944,GO:0072330,GO:0090702,GO:0097164,GO:0099120,GO:1901564,GO:1901566,GO:1901576,GO:1990823,GO:1990830
EggNOG free text desc.spermidine synthase activity
EggNOG OGsCOG0421@1,KOG1562@2759
EC1.5.1.10,2.1.1.53,2.5.1.16,2.5.1.22
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons7
Model size882
Cds size882
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928065.160524-CDS-E-fasciculatus_F_contig1597:11894..120431622928065.160524-CDS-E-fasciculatus_F_contig1597:11894..12043Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1597 11895..12043 -
1695995808.6479318-CDS-E-fasciculatus_F_contig1597:11894..120431695995808.6479318-CDS-E-fasciculatus_F_contig1597:11894..12043Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1597 11895..12043 -
1622928065.1771462-CDS-E-fasciculatus_F_contig1597:12186..123821622928065.1771462-CDS-E-fasciculatus_F_contig1597:12186..12382Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1597 12187..12382 -
1695995808.6588247-CDS-E-fasciculatus_F_contig1597:12186..123821695995808.6588247-CDS-E-fasciculatus_F_contig1597:12186..12382Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1597 12187..12382 -
1622928065.19549-CDS-E-fasciculatus_F_contig1597:12832..129191622928065.19549-CDS-E-fasciculatus_F_contig1597:12832..12919Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1597 12833..12919 -
1695995808.6675522-CDS-E-fasciculatus_F_contig1597:12832..129191695995808.6675522-CDS-E-fasciculatus_F_contig1597:12832..12919Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1597 12833..12919 -
1622928065.2089515-CDS-E-fasciculatus_F_contig1597:13267..133631622928065.2089515-CDS-E-fasciculatus_F_contig1597:13267..13363Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1597 13268..13363 -
1695995808.6760752-CDS-E-fasciculatus_F_contig1597:13267..133631695995808.6760752-CDS-E-fasciculatus_F_contig1597:13267..13363Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1597 13268..13363 -
1622928065.2252364-CDS-E-fasciculatus_F_contig1597:13788..138931622928065.2252364-CDS-E-fasciculatus_F_contig1597:13788..13893Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1597 13789..13893 -
1695995808.689307-CDS-E-fasciculatus_F_contig1597:13788..138931695995808.689307-CDS-E-fasciculatus_F_contig1597:13788..13893Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1597 13789..13893 -
1622928065.2410674-CDS-E-fasciculatus_F_contig1597:14316..144961622928065.2410674-CDS-E-fasciculatus_F_contig1597:14316..14496Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1597 14317..14496 -
1695995808.6980815-CDS-E-fasciculatus_F_contig1597:14316..144961695995808.6980815-CDS-E-fasciculatus_F_contig1597:14316..14496Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1597 14317..14496 -
1622928065.2552736-CDS-E-fasciculatus_F_contig1597:15658..157271622928065.2552736-CDS-E-fasciculatus_F_contig1597:15658..15727Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1597 15659..15727 -
1695995808.707776-CDS-E-fasciculatus_F_contig1597:15658..157271695995808.707776-CDS-E-fasciculatus_F_contig1597:15658..15727Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1597 15659..15727 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1597.4089.1prot_E-fasciculatus_F_contig1597.4089.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1597 11895..15727 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1597.4089.1

>prot_E-fasciculatus_F_contig1597.4089.1 ID=prot_E-fasciculatus_F_contig1597.4089.1|Name=mRNA_E-fasciculatus_F_contig1597.4089.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=294bp
MSIKDGWFSETEVLWPGQKFSLEVKEVLFHQRSDFQDVLVFDSVHYGKVL
VLDGVIQLTERDECSYQEMLTHIPCFAQGDPKKVLIVGGGDGGVLREVAR
HPGVETIHMCEIDSMVCEVAKRFEFCTASAFGDARLKLVHEDAAEFVTKE
GNNGYDVIIVDSSDPVGPAETLFQPSFYQNMKQALAPMGVIATQGECLWL
HLPLITTVLRACAEIFGSVDYAFTTVPSYPSGQIGFVLASVEERDLSTPT
ATPNAAMTEVLRYYSPEVHKAAFVLPVFAEKEIASARRRSSNE*
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mRNA from alignment at E-fasciculatus_F_contig1597:11895..15727-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1597.4089.1 ID=mRNA_E-fasciculatus_F_contig1597.4089.1|Name=mRNA_E-fasciculatus_F_contig1597.4089.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3833bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1597:11895..15727- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAGTATCAAAGATGGATGGTTCTCTGAGACCGAGGTGCTCTGGCCCGG GCAGAAATTTTCTCTAGAGGTGAGAGAGCCTGCAAAAAACAACGTGTGTG CGCCTTGGAAAAGGTGCTTATCTGTTTTCAAGTTTACGATCATGATGACA TCATCGCCCAGATCTCATTTCGGGTGGAGGGTACGCACCCCGACACTCGC TGATTATCACGTTTCATCGCAGAGTCTCTGGCTCCAGGAGTGCTGTGGTA TCTTCACTCCCGGGCCCGTTCTTCCTTGACCACTCTTTGCCAGCAACAGA TCAGATTTGGTACCTGCATGTGTGGTACTTGCTTGTGTACGGACGAGCTT GTGTGCGAATGGTTCCTGACGATGACTCCATCCCTCTTCACCAAAATAAT CCTCTTGCACATATACCAGGTAGGGCAGCCACCACCTATTTTGCGCAGCC CTCAAGGCTTTTCGCTTCTGGCCGCCCCAATACTGGGGTACTTCCTTTGC AAACTCTAACGTCAGTCTGGTACCAGGAATACGCCACTACAACTTCGTGG GTCTTCTTCTTGACAACGAAAACCCCGTGTTGGATAACCTTCATGTCTAC TGCTGTAGCTGGTATTCCATTGACATTGCTGCAGTTTAGTGTTTCCCGTT GATAGTGTTATTATGACTACTGCTGTCTACACCGCTTCCGTAGCCCTATT AACTTGTACTGTAGGACCCTGGCAAACGGCGGGACAGGCACCGTGCTTCA AACACATGTGCTTTCGCGGTATTTTTTCACGTAGAACTAAATGAACACCA TGGAAATATCGAATAAGCTTCAACCTCCTTGGTCCACATGTCGTATGATC TGGTCTTCCTCGAGCTGCACACGGTGGTGGTTCGTACCTCGGTGTTTTGG ACACCGTCCGTATCCAAGCCCCAGCAGTGGTACATGCTGAGAACATGTCC TCAAAGGTGTTCTTGTATTTTGAAATTTGAGCCCTGCTTGAATTTCTGAA CTGCCAACGTGTAAAGGTGGTTTGTAGAGCTGTATCTGCACAGCAGGAAC GTGCACCCTAGTCGATACAGGCCATCGAAATATTTGATGTTTACAACCAT TCGAAAGGGAACTCGCAAGACCGCGGCGACACCCTGGTTAGGTTGAGATG TATTTGCGACGTTTCGAATAAACACATAAATGCCCTTTCCCTTGGCGACA ATGATGGTGGCCTGCTCGTTTTACTTCATAGGTGAAGGAGGTGCTATTCC ATCAGCGATCCGACTTTCAAGACGTGCTGGTGTTTGATTCAGTGCACTAT GGTAAAGTGCTCGTCCTGGATGGGGTGATCCAGCTCACTGAACGAGACGA GTGCTCTTATCAAGAGATGCTCACCCACATTCCGTGTTTTGCGCAAGGCG ACCCCAAGAAGGTATGACAATCGCGTATTGAGCAGTACCAAGCTGCTGCA GTGTTCCTTCCCACGTGCTACACTCCGTCGTCAAGGGCGACAAAACGCTC TGGAACTCGTCACTGTCTTGGTAGACCCACGAGGTCAGGACTGGGGGCTT TTCTCGTAGTGAAATTTATAAGAATCGAGCAACGGGAGAAACGGAGGCTT GTCTATTTGACACGTGCAGTGCCAGGAGCCCAACGACGAACCCCAGATCG TGTTGATCCTACAGTTGACCTCAATGACTCTATTGCTCACCCTCACCCTG CCATGTTCGAAAACAACGCATCCTATCATCCAGAAGGTTCCTGGTTGGTC CAAGAAAAGAATGCTCTGCTTGCTTTCTCACAAAAGACAATGTATATCCT GCCAATCCATAATTCTATGGCATTTCACCGCCAGGTTCTTATCGTAGGAG GCGGGGACGGCGGCGTACTTCGGGAGGTAGCCCGCCACCCCGGAGTGGAA ACAATCCACATGTGCGAGATCGACTCCATGGTGTGCGAGGTGAGAACTGA CTAGTCCGCATGTTTATCGTGGATGACCCGTGCTGAAACAACATCCGTGG GTGAAATATAAGGGTATGCCGCACCGTCCGCCCGCGAGCGGGTTAGCAGG GAGGATAGTCTAGGGGTCAGTGTCTCTCCCCCTTGTATGCAGACGTTTAC CAGTAGTTCCCAAGGTGTTGTCGGCGATGTCGGGATGGTGCGGGATGGCA GTACAATACAGAGTCTGTGTGTTGCGGCACTGCGAACTGGGCCTGGCAAG GTTAGTTGCAGGATACCGTGAACGCAAGTGCACCGGTCTAACCGCTAGTA AGTGAAAGTCCGCTAGCGCAATAACGACGACCTGAAACCTTCTTAGCAGC AGTTGTGTCCTTGCTGTTGCCGTGCCAAACCTGGGCCCACTGTGACGTTT CGGTCCATATGAAGGTGGCCAAGCGTTTCGAATTTTGCACGGCGTCTGCC TTCGGAGATGCACGCCTCAAGCTTGTGCACGAAGATGCCGCAGAATTTGT CACGAAGGAGGTGAGGTCCGAATACGAGTTGAACATCGAAAATGGGATAG CAGGTTTTATGGCGATGCCAACGAATTCCTGTGCCCGAGATATTTCGTCC TCTTTCGGGGGGGTAGACGCCGTTCTGTACGAAGCCCCTAGTTAGTTACC TTTGACCATAATTGTGGAATGGTTTTGCAGTTGCTTCAACACTGTATTCC AGCATGGCGTCGCCCACGAAATTACGACCGGGTGACGTCTCGGGCGGGTA TAGTTTGGCATGCCTCTTTAGTGTAGTGTAGTGTGTATTTTTTTGTAACC ACGTGTGCAACACTCGAAAACCCTTGCTCGACTTTCCCCTTGTGCCTGCT TCCTACAGGGTAACAATGGGTATGACGTTATCATCGTGGATTCATCCGAC CCCGTCGGTCCTGCGGAAACCCTCTTCCAACCGAGTTTTTACCAAGTGAG AATTGCTCGTGAGAGGACGAGACAAGTGATAACATGTCGTGTAAGCAAGA TGCAGGAAAACGTGGCATACATACGTGTACCAAGAGAAGACGTCCGTGCA CGCGAAGCACGAAAACAGTGAGCGCCCGTTCCACTACTGTACGCGTCATC GATTGCTCGTCATTGGTTGCTTGCCATGTACATAACGGACCTTCTCGCAA TTATCTGAACAGCAAATCGCAGGAAACCTTTGGTACACAGCACAATCTTT GTTCGTTGACTGGATCAAAACGTGGCTCTGCCTCGTAACTGTGGTATCAC CGTGACTTCTACTGCCAGCAATAACTTGCTAACATTACCCTTGTTCTACC CTCGTTCTTCGTGGCACACGCTTGATATACAGAAGATAGATGCGTCACGG TTGATCGACCGCCCTTGTGTTGTGTATTACTACCGTACCGTCTAGAACAT GAAGCAGGCACTGGCGCCTATGGGGGTCATCGCAACGCAAGGGGAATGCC TGTGGCTGCACCTGCCGCTGATCACCACCGTCTTGCGTGCATGTGCTGAG ATATTTGGCTCGGTGGACTATGCCTTCACAACGGTGCCCTCGTACCCATC TGGACAGATCGGATTCGTTCTTGCAAGCGTGGAAGAGCGAGGTGAGGAGT AGGTATGTTGCAAGAACCTTGCTCGCACTGGAGCCGCACATCTCTATTCG TATGCGTAGGTGTAATACCGAGCCCGCACGCGGTAGACCACACACATGTA ACAATACGGACCAATCTTTGATTGTCTCTCGCAGATTTATCGACGCCGAC AGCTACTCCCAATGCTGCAATGACGGAAGTGCTGAGATACTACAGCCCGG AGGTTCACAAGGCCGCCTTCGTTCTTCCCGTCTTCGCAGAAAAAGAAATA GCAAGCGCGAGACGGCGTTCTTCAAACGAATAA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1597:11895..15727-

>mRNA_E-fasciculatus_F_contig1597.4089.1 ID=mRNA_E-fasciculatus_F_contig1597.4089.1|Name=mRNA_E-fasciculatus_F_contig1597.4089.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1764bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1597:11895..15727- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAGTATCAAAGATGGATGGTTCTCTGAGACCGAGGTGCTCTGGCCCGG
GCAGAAATTTTCTCTAGAGATGAGTATCAAAGATGGATGGTTCTCTGAGA
CCGAGGTGCTCTGGCCCGGGCAGAAATTTTCTCTAGAGGTGAAGGAGGTG
CTATTCCATCAGCGATCCGACTTTCAAGACGTGCTGGTGTTTGATTCAGT
GCACTATGGTAAAGTGCTCGTCCTGGATGGGGTGATCCAGCTCACTGAAC
GAGACGAGTGCTCTTATCAAGAGATGCTCACCCACATTCCGTGTTTTGCG
CAAGGCGACCCCAAGAAGGTGAAGGAGGTGCTATTCCATCAGCGATCCGA
CTTTCAAGACGTGCTGGTGTTTGATTCAGTGCACTATGGTAAAGTGCTCG
TCCTGGATGGGGTGATCCAGCTCACTGAACGAGACGAGTGCTCTTATCAA
GAGATGCTCACCCACATTCCGTGTTTTGCGCAAGGCGACCCCAAGAAGGT
TCTTATCGTAGGAGGCGGGGACGGCGGCGTACTTCGGGAGGTAGCCCGCC
ACCCCGGAGTGGAAACAATCCACATGTGCGAGATCGACTCCATGGTGTGC
GAGGTTCTTATCGTAGGAGGCGGGGACGGCGGCGTACTTCGGGAGGTAGC
CCGCCACCCCGGAGTGGAAACAATCCACATGTGCGAGATCGACTCCATGG
TGTGCGAGGTGGCCAAGCGTTTCGAATTTTGCACGGCGTCTGCCTTCGGA
GATGCACGCCTCAAGCTTGTGCACGAAGATGCCGCAGAATTTGTCACGAA
GGAGGTGGCCAAGCGTTTCGAATTTTGCACGGCGTCTGCCTTCGGAGATG
CACGCCTCAAGCTTGTGCACGAAGATGCCGCAGAATTTGTCACGAAGGAG
GGTAACAATGGGTATGACGTTATCATCGTGGATTCATCCGACCCCGTCGG
TCCTGCGGAAACCCTCTTCCAACCGAGTTTTTACCAAGGTAACAATGGGT
ATGACGTTATCATCGTGGATTCATCCGACCCCGTCGGTCCTGCGGAAACC
CTCTTCCAACCGAGTTTTTACCAAAACATGAAGCAGGCACTGGCGCCTAT
GGGGGTCATCGCAACGCAAGGGGAATGCCTGTGGCTGCACCTGCCGCTGA
TCACCACCGTCTTGCGTGCATGTGCTGAGATATTTGGCTCGGTGGACTAT
GCCTTCACAACGGTGCCCTCGTACCCATCTGGACAGATCGGATTCGTTCT
TGCAAGCGTGGAAGAGCGAGAACATGAAGCAGGCACTGGCGCCTATGGGG
GTCATCGCAACGCAAGGGGAATGCCTGTGGCTGCACCTGCCGCTGATCAC
CACCGTCTTGCGTGCATGTGCTGAGATATTTGGCTCGGTGGACTATGCCT
TCACAACGGTGCCCTCGTACCCATCTGGACAGATCGGATTCGTTCTTGCA
AGCGTGGAAGAGCGAGATTTATCGACGCCGACAGCTACTCCCAATGCTGC
AATGACGGAAGTGCTGAGATACTACAGCCCGGAGGTTCACAAGGCCGCCT
TCGTTCTTCCCGTCTTCGCAGAAAAAGAAATAGCAAGCGCGAGACGGCGT
TCTTCAAACGAATAAATTTATCGACGCCGACAGCTACTCCCAATGCTGCA
ATGACGGAAGTGCTGAGATACTACAGCCCGGAGGTTCACAAGGCCGCCTT
CGTTCTTCCCGTCTTCGCAGAAAAAGAAATAGCAAGCGCGAGACGGCGTT
CTTCAAACGAATAA
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