mRNA_E-fasciculatus_F_contig1582.4000.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1582.4000.1 vs. uniprot
Match: D7FPU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPU0_ECTSI) HSP 1 Score: 503 bits (1295), Expect = 1.050e-171 Identity = 265/290 (91.38%), Postives = 269/290 (92.76%), Query Frame = 1
Query: 961 FDGVTLDLAQS*-NGEEMAPIFSGACWAGTVVWPAALDLCDYMSEHLRQALVGATVVELGCGIGVPGMVARLLGATVVLTEQDELLSLLDGNLDSNFAGHPRGEGGIRREALDWEREADTDGLLASLERSGAAAPGEAEGESGAGVGRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTTVLCSVERRGVDGVPQFLRACEAEGFSLQTVYRAAPSAPAPVELYEFSKGEFRGEAVAVAEGEEGGAEGGDSKGEPMEGERSGALEVVDDG--SPGAASKSTTR 1821
FDGVTLDLAQS NGEEMAPIFSGACWAGTVVWPAALDLCDYMSEHLRQA+VGATVVELGCGIGVPGMVARLLGATVVLTEQDELLSLLD NLD NFAGHPRGEGGIRREALDWEREADTDGLLASLERSG A PGEAEGE GAGV RRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTTVLCSVERRGVDGVP+FLRACEAEGFSLQTVYRAAPSAPAPVELYEFSKG FRGEAVAV E + GG EGGD KG+PMEGE GALEVVD G SPGA SKST R
Sbjct: 10 FDGVTLDLAQSWENGEEMAPIFSGACWAGTVVWPAALDLCDYMSEHLRQAMVGATVVELGCGIGVPGMVARLLGATVVLTEQDELLSLLDRNLDGNFAGHPRGEGGIRREALDWEREADTDGLLASLERSGTA-PGEAEGEPGAGVRRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTTVLCSVERRGVDGVPEFLRACEAEGFSLQTVYRAAPSAPAPVELYEFSKGVFRGEAVAVVESD-GGMEGGDGKGKPMEGEGGGALEVVDGGAVSPGAGSKSTAR 297
BLAST of mRNA_E-fasciculatus_F_contig1582.4000.1 vs. uniprot
Match: A0A6H5KZX5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZX5_9PHAE) HSP 1 Score: 448 bits (1153), Expect = 3.410e-150 Identity = 243/291 (83.51%), Postives = 247/291 (84.88%), Query Frame = 1
Query: 958 EFDGVTLDLAQS*-NGEEMAPIFSGACWAGTVVWPAALDLCDYMSEHLRQALVGATVVELGCGIGVPGMVARLLGATVVLTEQDELLSLLDGNLDSNFAGHPRGEGGIRREALDWEREADTDGLLASLERSGAAAPGEAEGESGAGVGRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTTVLCSVERRGVDGVPQFLRACEAEGFSLQTVYRAAPSAPAPVELYEFSKGEFRGEAVAVAEGEEGGAEGGDSKGEPMEGERSGALEVVDDG--SPGAASKSTTR 1821
EFDGVTLDLAQS NGEEMAPIFSGACWAGTVVWPAALDLCDYMSEHLRQALVGATVVELGCG+ DELLSLLD NLD NFAGHPRGEGGIRREALDWEREADTDGLLAS+ERSG PGEAEGE GAGV RRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTTVLCSVERRGVDGVP FLRACEAEGFSLQTVYRAAPSA A VELYEFSKG FRGEAVAV E + GG EGGD KG+PMEGE GALEVVD G SPGA SKST R
Sbjct: 33 EFDGVTLDLAQSWENGEEMAPIFSGACWAGTVVWPAALDLCDYMSEHLRQALVGATVVELGCGMF------------------DELLSLLDRNLDGNFAGHPRGEGGIRREALDWEREADTDGLLASMERSGTV-PGEAEGEPGAGVRRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTTVLCSVERRGVDGVPDFLRACEAEGFSLQTVYRAAPSASAQVELYEFSKGVFRGEAVAVVESD-GGMEGGDGKGKPMEGEGGGALEVVDGGAVSPGAGSKSTAR 303
BLAST of mRNA_E-fasciculatus_F_contig1582.4000.1 vs. uniprot
Match: A0A836CJX9_9STRA (Putative methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJX9_9STRA) HSP 1 Score: 160 bits (404), Expect = 5.260e-41 Identity = 101/222 (45.50%), Postives = 120/222 (54.05%), Query Frame = 1
Query: 1024 SGACWAGTVVWPAALDLCDYMSEHLRQALVG-ATVVELGCGIGVPGMVARLLGATVVLTEQDELLSLLDGNLDSNF----------AGHPRGEGGIRREALDWEREADTDGLLASLERSGAAAPGEAEGESGAGVGRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTTVLCSVERRGVDGVPQFLRACEAEGFSLQTVYRAAPSAPAPVELYEF 1656
+GACWAGT+VW AALDL DY+S H L G ATVVELGCGIGVPGMVA LLGA+ VLTEQ ELL LL NL +NF + R I LDW + D LL EG DF+L ADC++EPLYG+SWKAL + L T L VERR DG+ FL A G + T+ A+ ++ P+ELYE
Sbjct: 30 AGACWAGTIVWQAALDLSDYLSRHHAGQLAGGATVVELGCGIGVPGMVAHLLGASAVLTEQAELLGLLRRNLAANFGVAHASASQVSSRRRTAPFISAAQLDWATD-DPRALLRD----------HFEG----------AHPDFILSADCIYEPLYGESWKALVTALRGLCGPHTRALVCVERRTADGINGFLDAARGAGLEV-TLPHASGASGVPIELYEM 229
BLAST of mRNA_E-fasciculatus_F_contig1582.4000.1 vs. uniprot
Match: A0A2R5G0X5_9STRA (Protein N-lysine methyltransferase METTL21A n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G0X5_9STRA) HSP 1 Score: 143 bits (361), Expect = 2.210e-34 Identity = 94/235 (40.00%), Postives = 125/235 (53.19%), Query Frame = 1
Query: 964 DGVTLDLAQS*NGEEMAPIFSGACWAGTVVWPAALDLCDYMSEHLRQALVGATVVELGCGIGVPGMVARLLGAT-VVLTEQDELLSLLDGNLDSNFAGH-PRGEGGIRREALDWEREADTDGLLASLERSGAAAPGEAEGESGAGVGRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLS--DAGTTVLCSVERRGVDGVPQFLRACEAEGFSLQTVYRAAPSAPAPVELYEF 1656
DG L+L + E + PIFSGACWAGTVVWPAAL LC+++ + + + V+ELG G+GVPGMV +LLGA V+LTEQD L LL N+D+NFA PR + LDWE ++ + A P D +L +DCV++ LYGDSW+ALA + LS T L ++ERR DGV +FL C G + + +ELYE
Sbjct: 98 DGKMLELELTFPEESIQPIFSGACWAGTVVWPAALLLCEHL-KTMADTVKDQRVLELGSGLGVPGMVCQLLGAKEVILTEQDPLPELLRRNVDANFANDAPR----PLVDTLDWEEPEESS--------TNAQEP-----------------FDLILISDCVYQELYGDSWRALADCIKALSRPKRATLTLNALERRKADGVDEFLAYCREIGVCHKRIQTLMGPENEQLELYEM 302
BLAST of mRNA_E-fasciculatus_F_contig1582.4000.1 vs. uniprot
Match: A0A024FZ75_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FZ75_9STRA) HSP 1 Score: 142 bits (357), Expect = 2.230e-34 Identity = 96/246 (39.02%), Postives = 128/246 (52.03%), Query Frame = 1
Query: 961 FDGVTLDLAQS*NGEEMAPIFSGACWAGTVVWPAALDLCDYMSEH----LRQALVGATVVELGCGIGVPGMVARLLGA-TVVLTEQDELLSLLDGNLDSNFAG---HP---RGEGGIRREALDWEREADTDGLLASLERSGAAAPGEAEGESGAGVGRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGT--TVLCSVERRGVDGVPQFLRACEAE-GFSLQTVYRAAPSAPAPVELYEF 1656
F L L+ EE+AP+FSGA WAGTVVW AA+ L Y H LR AL V+ELG GIGVPGM AR+ GA +V+LTEQ++L+ L+ N+ SN HP + E I L W +E+ L + ++DFVL DC+FEPLYGDSWKALA M + + +V SVERR DGV +FL +A + + ++ SA +E+Y+
Sbjct: 28 FGTTKLTLSLLLKEEELAPLFSGAAWAGTVVWDAAIYLTRYFLHHYGTELRNALRSTRVLELGAGIGVPGMAARIAGADSVILTEQEDLVDLIHRNIKSNANALGLHPANDKKEQAIVGRVLSWGKESINTYLKTYHDE----------------------QIDFVLSCDCIFEPLYGDSWKALAITMQEICELNPECSVFLSVERRKEDGVDRFLEHVDASTSLVSKLLEKSIGSAENLLEIYQL 251
BLAST of mRNA_E-fasciculatus_F_contig1582.4000.1 vs. uniprot
Match: F0X125_9STRA (Uncharacterized protein AlNc14C546G12115 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0X125_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.620e-32 Identity = 89/233 (38.20%), Postives = 121/233 (51.93%), Query Frame = 1
Query: 1003 EEMAPIFSGACWAGTVVWPAALDLCDYMSEH----LRQALVGATVVELGCGIGVPGMVARLLGA-TVVLTEQDELLSLLDGNLDSNF------AGHPRGEGGIRREALDWEREADTDGLLASLERSGAAAPGEAEGESGAGVGRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTT--VLCSVERRGVDGVPQFLRACEAEGFSLQTVY-RAAPSAPAPVELYEFS 1659
EE+AP+FSGA WAGTVVW AA+ L Y H LR L V+ELG GIGVPGM AR+ GA +V+LTEQ++L+ L+ NL N A + + E I L W +E+ + L+ + ++DFVL DC+F PLYGDSWKALA M + + V SVERR DGV FL + + + ++ SA +E+Y+ +
Sbjct: 51 EELAPLFSGAAWAGTVVWDAAIYLARYFLHHYGAILRDKLRSIRVLELGAGIGVPGMAARIAGAESVILTEQEDLVDLMHRNLKGNANALGLDAANDKKEQAIVGRVLSWGKESIHNYLMTYQDE----------------------QIDFVLSCDCIFVPLYGDSWKALAITMQAICETNPQCCVFLSVERRKEDGVDSFLEYIASRTILISKLLEKSIASAENLLEIYQLN 261
BLAST of mRNA_E-fasciculatus_F_contig1582.4000.1 vs. uniprot
Match: A0A7S2RY16_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RY16_9STRA) HSP 1 Score: 135 bits (341), Expect = 4.210e-32 Identity = 81/190 (42.63%), Postives = 105/190 (55.26%), Query Frame = 1
Query: 1015 PIFSGACWAGTVVWPAALDLCDYMSEHLRQALVGATVVELGCGIGVPGMVARLLGAT-VVLTEQDELLSLLDGNLDSNFAGHPRGEGGIRR---EALDWEREADTDGLLASLERSGAAAPGEAEGESGAGVGRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLS-DAGTTVLCSVERRGVDGVPQFL 1569
PIF G CWAGT+VW AA + +++ R+ + GA+V+ELGCG+G PGMVA LLGA V+LTEQ LL LL N+ NF GEG + + L W D L+ S RR D +L DCVFEPLYG+SW L + + L+ D TT++ +ERR DGVP+FL
Sbjct: 2 PIFGGCCWAGTIVWAAAQAVMEHVLFPERERVQGASVIELGCGLGAPGMVAALLGARDVLLTEQSSLLPLLHRNIARNFPA--AGEGAVAAPGAQELAWGNSQVRD-LIDS---------------------RRGETFDLILVCDCVFEPLYGESWVLLCETLRHLAVDESTTLVVGLERRSEDGVPKFL 167
BLAST of mRNA_E-fasciculatus_F_contig1582.4000.1 vs. uniprot
Match: A0A8J2SF35_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SF35_9STRA) HSP 1 Score: 134 bits (336), Expect = 1.540e-31 Identity = 94/238 (39.50%), Postives = 124/238 (52.10%), Query Frame = 1
Query: 970 VTLDLAQS*NGEEMAPIFSGACWAGTVVWPAALDLCD--YMSEHLRQALVGATVVELGCGIGVPGMVARLLGA-TVVLTEQDELLSLLDGNLDSNFAGHPRGEGGIRREALDWEREADTDGLLASLERSGAAAPGEAEGESGAGVGRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTTVLCSVERR----GVDGVPQFLRACEAEGFSLQTVYRAAPSAPAPVELYEFSK 1662
+ LDL S +++ P+FSGA WAGTV+W AA L D ++ Q + G T +ELGCG+GVPGM LGA V LTEQ L+ LL N+ +NF+ GE +R + W R A + L G D ++C DCV+ PLYGDSWKAL + + L+ T VL S+ERR G DGV FL A GF+ +T Y AA PVE++ F +
Sbjct: 50 LNLDLKLS--PDDLEPVFSGAAWAGTVLWRAAAVLVDRAFLGADAVQ-IKGRTCIELGCGLGVPGMACARLGARNVALTEQQSLVDLLTRNVAANFSA---GED-VRAVSFPWSR-AGAEALKHDFCDGGC--------------------FDVIVCCDCVYMPLYGDSWKALLEAIDALAGPATDVLISLERRHVKDGDDGVDPFLEGMRANGFA-RTSYPAAM----PVEVFRFRR 254
BLAST of mRNA_E-fasciculatus_F_contig1582.4000.1 vs. uniprot
Match: A0A1V9YH22_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YH22_9STRA) HSP 1 Score: 133 bits (334), Expect = 1.840e-31 Identity = 95/240 (39.58%), Postives = 121/240 (50.42%), Query Frame = 1
Query: 973 TLDLAQS*NGEEMAPIFSGACWAGTVVWPAALDLCDYMSEHLRQALVGATVVELGCGIGVPGMVARLLGAT-VVLTEQDELLSLLDGNLDSNFAGHPRGEGGIRREALDWEREADTDGLLASLERSGAAAPGEAEGESGAGVGRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTT--VLCSVERRGVDGVPQFLRACEAEGFSLQTVYRAAPSAPA-------PVELYEFSK 1662
+LD++ + EE+AP+F GA WAGT+VW AA L +YM L + + V+ELG G+GVPGMVA LLGA VVLTEQ EL+ LL N+ NFAG + L W REA A V T D +L DCV+EPLYG+SW+ALA M L A L SVERR DG+ +FL ++ RA P A +E+Y S+
Sbjct: 28 SLDISLLLDEEELAPLFCGAAWAGTLVWEAAELLSNYMLNELDVSSL--RVLELGAGLGVPGMVAGLLGAQHVVLTEQPELVPLLRTNIRRNFAG----ANSVAAAELSWGREATR-----------------------AFVATHGT-FDVLLSCDCVYEPLYGESWRALAHTMDELCAANPACRALVSVERRHGDGIDRFLAFLPTATRLTASLLRAVPKATRGLCDEGDAIEIYVISR 237
BLAST of mRNA_E-fasciculatus_F_contig1582.4000.1 vs. uniprot
Match: A0A7S3JW58_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JW58_9STRA) HSP 1 Score: 134 bits (337), Expect = 3.560e-31 Identity = 95/239 (39.75%), Postives = 126/239 (52.72%), Query Frame = 1
Query: 976 LDLAQS*NGEEMAPIFSGACWAGTVVWPAALDLCD--YMSEHLR--QALVGATVVELGCGIGVPGMVARLLGATVV-LTEQDELLSLLDGNLDSNFAGHPRGEGGIRREALDWERE---ADTDGLLASLERSGAAAPGEAEGESGAGVGRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTTVLCSVERR----GVDGVPQFLRACEAEGFSLQTVYRAAPSAPAPVELYEF 1656
L+L+ + + PIFSG WAGTV+W AA+ L D ++S++ + L A+V+ELGCG+GVPGMVA +LGA +V LTEQ L+SLLD N+ +NF I LDW E A + LL +GE D VL DCV+ PLYGDSW+AL + ++ + VL +VERR G DGV FL A + F + S P PVE+Y F
Sbjct: 77 LELSLRMTPDAIEPIFSGGAWAGTVLWRAAIRLVDICFLSDNKKGIDELQSASVIELGCGLGVPGMVAAVLGARLVALTEQSNLVSLLDRNIKANFLSDSTNNPRIVARELDWCAEQAIALRNELL--------------DGEP----------FDIVLSCDCVYIPLYGDSWRALVDAIIAVAGPKSLVLVAVERRYVQGGTDGVDLFLNAMTSANFIPSLI-----SEP-PVEIYSF 285 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1582.4000.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1582.4000.1 >prot_E-fasciculatus_F_contig1582.4000.1 ID=prot_E-fasciculatus_F_contig1582.4000.1|Name=mRNA_E-fasciculatus_F_contig1582.4000.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=272bp MAPIFSGACWAGTVVWPAALDLCDYMSEHLRQALVGATVVELGCGIGVPGback to top mRNA from alignment at E-fasciculatus_F_contig1582:12079..15807- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1582.4000.1 ID=mRNA_E-fasciculatus_F_contig1582.4000.1|Name=mRNA_E-fasciculatus_F_contig1582.4000.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3729bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1582:12079..15807- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1582:12079..15807- >mRNA_E-fasciculatus_F_contig1582.4000.1 ID=mRNA_E-fasciculatus_F_contig1582.4000.1|Name=mRNA_E-fasciculatus_F_contig1582.4000.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1632bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1582:12079..15807- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |