mRNA_E-fasciculatus_F_contig15795.3985.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15795.3985.1 vs. uniprot
Match: D7G057_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G057_ECTSI) HSP 1 Score: 348 bits (894), Expect = 3.390e-116 Identity = 172/197 (87.31%), Postives = 177/197 (89.85%), Query Frame = 1
Query: 16 QATTALGCGIMALGVFLSSYAPNLATFMFCYSFMFGSGIGLAYTAPMVNGWRWFPGRKGMVSGAIVAGFGAGGFVFNQVGTGIINPKGLDAVGGVYPDEVYANFPVMLRKLALIYFVVAALGATVIRPXXXXXXXXXXXXXNGRGKVQTAAPGTSLKQVVKDRKFWLMWFMALMIGTSGINVANCYKQYGGSVDILK 606
QATTALGCGIMALGVFLSSYAPNLA FMFCYSFMFGSGIGLAYTAPMVNGWRWFP RKGMVSGA+VAGFGAGGFVFNQVGTGIINPKGLDAV GVYPDEVYANFPVMLRKLALIYF+VAALG+TVIRP G GKVQ AA GTSLKQVVKD++FWLMWFMALMIGTSGINVANCYKQYGGSVDILK
Sbjct: 166 QATTALGCGIMALGVFLSSYAPNLAIFMFCYSFMFGSGIGLAYTAPMVNGWRWFPSRKGMVSGAVVAGFGAGGFVFNQVGTGIINPKGLDAVDGVYPDEVYANFPVMLRKLALIYFLVAALGSTVIRPPPVAAAPKGGRNNRGHGKVQAAATGTSLKQVVKDKRFWLMWFMALMIGTSGINVANCYKQYGGSVDILK 362
BLAST of mRNA_E-fasciculatus_F_contig15795.3985.1 vs. uniprot
Match: A0A835ZED6_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZED6_9STRA) HSP 1 Score: 240 bits (612), Expect = 4.820e-74 Identity = 116/191 (60.73%), Postives = 140/191 (73.30%), Query Frame = 1
Query: 16 QATTALGCGIMALGVFLSSYAPNLATFMFCYSFMFGSGIGLAYTAPMVNGWRWFPGRKGMVSGAIVAGFGAGGFVFNQVGTGIINPKGLDAVGGVYPDEVYANFPVMLRKLALIYFVVAALGATVIRPXXXXXXXXXXXXXNGRGKVQTAAP-GTSLKQVVKDRKFWLMWFMALMIGTSGINVANCYKQYG 585
+ T +GC +MA GV LSSYA +LA FMFCYSFMFG+G+G+AYTAPMVNGWRWFPG+KG+VSG +VAGFGAGGF+FNQVG+ IINP G+ AV GVYP +YA FPVMLRKLALIYF + LGA ++ P G TA P GTSL+ V+ R FW +W MAL++GT+GINVA YK +G
Sbjct: 148 RGATLVGCWLMAAGVLLSSYAKSLAAFMFCYSFMFGAGVGIAYTAPMVNGWRWFPGKKGLVSGCVVAGFGAGGFIFNQVGSRIINPSGISAVDGVYPAAIYAAFPVMLRKLALIYFTLTGLGALLVNPPPPVVTAV--------GAPATAPPLGTSLRDAVRSRAFWSLWLMALLVGTAGINVAGTYKAFG 330
BLAST of mRNA_E-fasciculatus_F_contig15795.3985.1 vs. uniprot
Match: A0A7S1XR46_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XR46_9STRA) HSP 1 Score: 174 bits (442), Expect = 4.690e-49 Identity = 88/200 (44.00%), Postives = 126/200 (63.00%), Query Frame = 1
Query: 31 LGCGIMALGVFLSSYAPNLATFMFCYSFMFGSGIGLAYTAPMVNGWRWFPGRKGMVSGAIVAGFGAGGFVFNQVGTGIINPKGLDAVGGVYPDEVYANFPVMLRKLALIYFVVAALGATVIRPXXXXXXXXXXXXXNGRGKVQTAAPGTS---------LKQVVKDRKFWLMWFMALMIGTSGINVANCYKQYGGSVDIL 603
LG IMA GV+LSSYA +L TFM YS +FG GIG+AYT+ V GW+WFP R+G+VSG+++ GFGAGGF FN++GT ++NP + + GV+PD VY+ +P+MLR LA+IY V+AA+GA +IR +G AAPG + +K+ V ++FW++W M +NV++ YK G + + L
Sbjct: 120 LGAWIMAAGVYLSSYATDLTTFMIGYSVLFGIGIGMAYTSAWVEGWKWFPRRRGLVSGSVLTGFGAGGFFFNKIGTSLVNPDNMQTIDGVFPDAVYSRWPLMLRSLAIIYAVLAAVGAFLIRTPP-------------KGYAVEAAPGAADAPAVKSLTVKEAVATKQFWMIWACIFMSVCGCLNVSSNYKYLGSAYEHL 306
BLAST of mRNA_E-fasciculatus_F_contig15795.3985.1 vs. uniprot
Match: A0A7R9U6G1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6G1_9STRA) HSP 1 Score: 169 bits (429), Expect = 1.540e-46 Identity = 84/191 (43.98%), Postives = 118/191 (61.78%), Query Frame = 1
Query: 31 LGCGIMALGVFLSSYAPNLATFMFCYSFMFGSGIGLAYTAPMVNGWRWFPGRKGMVSGAIVAGFGAGGFVFNQVGTGIINPKGLDAVGGVYPDEVYANFPVMLRKLALIYFVVAALGATVIRPXXXXXXXXXXXXXNGRGKVQTAAPGTSLKQVVKDRKFWLMWFMALMIGTSGINVANCYKQYGGSVDIL 603
+G +M GV+LSSYA +L TFM YS +FG GIG AYTA V GW+WFP R+G+VSGA++ GFGAGGF FN++GT + NP L+A+ G +P EVY+N+ MLR LA+IY + A+GA +IRP N +G ++ Q ++ ++FWL+W G+NV+ YK G + + L
Sbjct: 199 IGSWVMVTGVYLSSYATDLNTFMVFYSMIFGLGIGSAYTAAWVEGWKWFPRRRGLVSGAVLTGFGAGGFFFNRIGTKLANPNNLNAIDGTFPMEVYSNWGYMLRSLAVIYGTMTAIGAFLIRPPPKSYVTL-----NSQGLKSAGTRSLTVPQAIRTKQFWLIWACIFTSVCGGLNVSANYKYLGAAAENL 384
BLAST of mRNA_E-fasciculatus_F_contig15795.3985.1 vs. uniprot
Match: F0YGF5_AURAN (F-box domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGF5_AURAN) HSP 1 Score: 166 bits (421), Expect = 3.890e-44 Identity = 84/189 (44.44%), Postives = 118/189 (62.43%), Query Frame = 1
Query: 16 QATTALGCGIMALGVFLSSYAPNLATFMFCYSFMFGSGIGLAYTAPMVNGWRWFPGRKGMVSGAIVAGFGAGGFVFNQVGTGIINPKGLDAVGGVYPDEVYANFPVMLRKLALIYFVVAALGATVIRPXXXXXXXXXXXXXNGRGKVQTAAPGTSLKQVVKDRKFWLMWFMALMIGTSGINVANCYKQY 582
+A T G G++ALGVFL+S+A L F+ CYS + G+GI LAYTAP+V GW WFP +G V+GA++ GFGAGGF FN +GT + NP G+ A GG +PDEVYANFPVMLRKLAL+Y V A+G +++ P A T + +V R F +++ ++ ++G+ A+ YK +
Sbjct: 139 RAATLGGGGLVALGVFLASFATTLRAFLACYSGLVGAGIALAYTAPLVAGWSWFPDARGFVNGAVLMGFGAGGFFFNLLGTRLANPGGVPASGGAFPDEVYANFPVMLRKLALVYGAVVAVGGSLVAPRP------------AAXXXXXXADRTPARAIVLSRNFGVLYAATVLCASAGLTSASVYKVF 315
BLAST of mRNA_E-fasciculatus_F_contig15795.3985.1 vs. uniprot
Match: A0A8J5X5T2_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X5T2_DIALT) HSP 1 Score: 151 bits (382), Expect = 5.750e-40 Identity = 75/182 (41.21%), Postives = 106/182 (58.24%), Query Frame = 1
Query: 31 LGCGIMALGVFLSSYAPNLATFMFCYSFMFGSGIGLAYTAPMVNGWRWFPGRKGMVSGAIVAGFGAGGFVFNQVGTGIINPKGLDAVGGVYPDEVYANFPVMLRKLALIYFVVAALGATVIRPXXXXXXXXXXXXXNGRGKVQTAAPGTSLKQVVKDRKFWLMWFMALMIGTSGINVANCYK 576
+G +M LG+ +SYA +L F+ YS +FG+G+GL YTAPM GW WFP KG+V+G ++ GFG GGF+F +G + NP GL GGV+P +VYA+FP MLR LA Y ++AA+GA ++ P RG + S + V+ WL+W + LM +G+ A YK
Sbjct: 152 IGALVMNLGIVAASYATSLLPFILGYSLLFGTGVGLGYTAPMQAGWGWFPRSKGLVNGIVLLGFGFGGFLFTLLGQKVANPAGLKLSGGVFPPQVYASFPTMLRTLACCYMLMAAIGAALVTPAPPARPAATGGRK--RGATTMMSIDRSFGEAVRSPTLWLLWSLVLMAAPAGLATAAVYK 331
BLAST of mRNA_E-fasciculatus_F_contig15795.3985.1 vs. uniprot
Match: A0A6V2TA03_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A6V2TA03_EMIHU) HSP 1 Score: 150 bits (378), Expect = 2.240e-39 Identity = 84/198 (42.42%), Postives = 115/198 (58.08%), Query Frame = 1
Query: 22 TTALGCGIMALGVFLSSYAPNLATFMFCYSFMFGSGIGLAYTAPMVNGWRWFPGRKGMVSGAIVAGFGAGGFVFNQVGTGIINPKGLDAVGGVYPDEVYANFPVMLRKLALIYFVVAALGATV-IRPXXXXXXXXXXXXXNGRGKVQT--------AAPG-TSLKQVVKDRKFWLMWFMALMIGTSGINVANCYKQYG 585
T LG +M +GV ++ AP+LA+F CY+ +FG G+G+AY P++ G RWFP +KG+V+G++V G GA F+FN + T +INPKGL+AVGGV+P EVYAN+P +R L +Y +A GA + P G+ T AAPG SL +V KF MW M L G+NVA YK +G
Sbjct: 151 TALLGALMMGIGVMAAATAPSLASFCVCYAVVFGLGVGVAYQMPIIAGGRWFPAKKGVVTGSVVTGMGASAFLFNLLATRLINPKGLNAVGGVFPAEVYANWPHAIRTLGSLYTGLAVCGALLQSNPSSFAGAYPWRDALCGKRHAPTPKARKAVAAAPGGPSLPSLVFAPKFAAMWLMILGSAVGGLNVAGSYKTFG 348
BLAST of mRNA_E-fasciculatus_F_contig15795.3985.1 vs. uniprot
Match: W7TW79_9STRA (Major facilitator superfamily domain, general substrate transporter n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TW79_9STRA) HSP 1 Score: 146 bits (368), Expect = 2.640e-37 Identity = 77/187 (41.18%), Postives = 108/187 (57.75%), Query Frame = 1
Query: 31 LGCGIMALGVFLSSYAPNLATFMFCYSFMFGSGIGLAYTAPMVNGWRWFPGRKGMVSGAIVAGFGAGGFVFNQVGTGIINPKGLDAVGGVYPDEVYANFPVMLRKLALIYFVVAALGATVIRPXXXXXXXXXXXXXNGRGKVQTAAPGTSLK--QVVKDRKFWLMWFMALMIGTSGINVANCYKQYG 585
LGC +MA GVFLSS+A +L+ FM YS FG G+G+AYTAP+V GW+WFP KG+VSGA++ GFGAGGF FN +GT IINP + G + + A F +LRKLA Y +A LG+ ++ G+ K + A G Q + +FW +W + L++ + + A K +G
Sbjct: 160 LGCLLMATGVFLSSFATSLSMFMLFYSLFFGVGVGIAYTAPIVAGWKWFPDNKGLVSGAVLTGFGAGGFFFNLLGTKIINPLNEKPIKGAFSPALTAGFAPLLRKLAGCYVALAVLGSLLVSAPKSPAIQA------GKSKAKQAVIGPDYTPGQALTSLQFWWIWAIILLMSSGSLATAGVNKAFG 340
BLAST of mRNA_E-fasciculatus_F_contig15795.3985.1 vs. uniprot
Match: A0A0M0KBY1_9EUKA (Major facilitator superfamily protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0KBY1_9EUKA) HSP 1 Score: 138 bits (347), Expect = 1.540e-35 Identity = 83/188 (44.15%), Postives = 117/188 (62.23%), Query Frame = 1
Query: 22 TTALGCGIMALGVFLSSYAPNLATFMFCYSFMFGSGIGLAYTAPMVNGWRWFPGRKGMVSGAIVAGFGAGGFVFNQVGTGIINPKGLDAVGGVYPDEVYANFPVMLRKLALIYFVVAALGATVIRPXXXXXXXXXXXXXNGRGKVQTAAPGTSLKQVVKDRKFWLMWFMALMIGTSGINVANCYKQYG 585
T LG +M GV L+SYA +LATF+ + MFG G+G+AY P++ G +WFP KG VSGA++ G GA F FN++ T I+NP G++ VGG++P +YA++P +LR L IY +GA+ P XXXXXXXXXXXX + G SL + + F MW M + +G+N+A+ YK +G
Sbjct: 67 TALLGSVLMGSGVILASYATSLATFVPFFCVMFGLGVGIAYQMPILTGTKWFPKSKGGVSGAVIFGMGASAFFFNKLATAIVNPTGINPVGGLFPASIYASWPKLLRTLGSIYLACGLIGASFQVPPXXXXXXXXXXXXXXXXXXXSG--GNSLLADITSKPFVTMWLMIISAAIAGLNIASSYKLFG 252
BLAST of mRNA_E-fasciculatus_F_contig15795.3985.1 vs. uniprot
Match: A0A7S2IZ45_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IZ45_9EUKA) HSP 1 Score: 134 bits (336), Expect = 7.160e-34 Identity = 73/205 (35.61%), Postives = 108/205 (52.68%), Query Frame = 1
Query: 16 QATTALGCGIMALGVFLSSYAPNLATFMFCYSFMFGSGIGLAYTAPMVNGWRWFPGRKGMVSGAIVAGFGAGGFVFNQVGTGIINPKGLDAVGGVYPDEVYANFPVMLRKLALIYFVVAALGATV-IRPXXXXXXXXXXXXXNGRG---------KVQTAAPGTSL--KQVVKD---RKFWLMWFMALMIGTSGINVANCYKQYG 585
Q T +G +M GVF +SYA +L F+ +S +FG G+G+ Y P + G RWFP +KG V GAI++G GA F+FN + T +INP G+DAVGG +P+ V + +P +LR L + Y +A GA + P GR KV P ++ + V+ D +F +MW M + SG+ + YK +G
Sbjct: 58 QLTALIGGVMMGTGVFFASYAKSLGQFVLSFSLLFGLGVGIVYQMPFLTGGRWFPTKKGTVQGAIISGMGASAFLFNMLATKLINPTGIDAVGGTFPEVVTSRWPALLRTLGICYTTLALCGAMLQANPPSLGKKYPVIEYLRGRRSAPPSPPKCKVSPPVPASAAASRSVISDVLSPRFLIMWLMIINSAVSGLMITGSYKTFG 262 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15795.3985.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15795.3985.1 >prot_E-fasciculatus_F_contig15795.3985.1 ID=prot_E-fasciculatus_F_contig15795.3985.1|Name=mRNA_E-fasciculatus_F_contig15795.3985.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=202bp MNETHQATTALGCGIMALGVFLSSYAPNLATFMFCYSFMFGSGIGLAYTAback to top mRNA from alignment at E-fasciculatus_F_contig15795:898..2827- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15795.3985.1 ID=mRNA_E-fasciculatus_F_contig15795.3985.1|Name=mRNA_E-fasciculatus_F_contig15795.3985.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1930bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15795:898..2827- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15795:898..2827- >mRNA_E-fasciculatus_F_contig15795.3985.1 ID=mRNA_E-fasciculatus_F_contig15795.3985.1|Name=mRNA_E-fasciculatus_F_contig15795.3985.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1212bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15795:898..2827- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |