mRNA_E-fasciculatus_F_contig15787.3980.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15787.3980.1 vs. uniprot
Match: D7FN92_ECTSI (Nucleotidyltransferase family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN92_ECTSI) HSP 1 Score: 483 bits (1244), Expect = 6.000e-157 Identity = 326/355 (91.83%), Postives = 334/355 (94.08%), Query Frame = 1
Query: 64 GGADQAAAFSFGSGPGIMRRMSSISFSTGGIAGSAAAGFGGTSVPSAAIDMSDLNNLVKRVESANQLAMKVDSDDEDDAVDKLLEHQHQMMMRSSSSYSLASNPDASMQRLDRKESNDFFYMGSIDAGGNTQLPEEGDAQEPSPDVENADDNNDGDSRRGRNAAVPITIPVPEGSMPSKVWERLRKGGSLLGDPEERMMAEGQDGNTPGSGAVKASRDISRSMFGLSSPPHPXXXXXXXXPRWSSSLSAIFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSDVEEIALPLDILPCNKQPLAIDRRVDDLLRLLRPAPRAEGYRRSVFRFVTRQVR 1128
GGADQAAA+SFGSGPGIMRRMSS+SF+TGG+AGSAAAGFGGT VPSAAIDMSDLNNLVKRVESANQLAMKVDSDDEDDAVDKLLEHQHQMMMRSSSSYSLASNPDA MQRLDRKESNDFFYMGSIDAGG+TQLP EGD QE SPDV N +D GDSRRGRNAAVPITIPVPEGSMPSKVWERLRKGGSLLGDPEERMMAEGQDGNTPGSG VK DISRSMFGLSSPP PXXXXXXX PRW SSL+AIFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LSDVEEIALPLDILP NKQPLAIDRRVDDLLRLLRPAPRAEGYRRSVFRFVTRQV+
Sbjct: 300 GGADQAAAYSFGSGPGIMRRMSSMSFTTGGMAGSAAAGFGGTPVPSAAIDMSDLNNLVKRVESANQLAMKVDSDDEDDAVDKLLEHQHQMMMRSSSSYSLASNPDAGMQRLDRKESNDFFYMGSIDAGGSTQLPGEGDTQESSPDVANGEDAA-GDSRRGRNAAVPITIPVPEGSMPSKVWERLRKGGSLLGDPEERMMAEGQDGNTPGSGTVK---DISRSMFGLSSPPQPXXXXXXXAPRWPSSLAAIFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG--LSDVEEIALPLDILPSNKQPLAIDRRVDDLLRLLRPAPRAEGYRRSVFRFVTRQVK 648
BLAST of mRNA_E-fasciculatus_F_contig15787.3980.1 vs. uniprot
Match: A0A6H5KVP2_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVP2_9PHAE) HSP 1 Score: 468 bits (1205), Expect = 1.200e-147 Identity = 311/369 (84.28%), Postives = 323/369 (87.53%), Query Frame = 1
Query: 22 ASTGPTMSAGSYHSGGADQAAAFSFGSGPGIMRRMSSISFSTGGIAGSAAAGFGGTSVPSAAIDMSDLNNLVKRVESANQLAMKVDSDDEDDAVDKLLEHQHQMMMRSSSSYSLASNPDASMQRLDRKESNDFFYMGSIDAGGNTQLPEEGDAQEPSPDVENADDNNDGDSRRGRNAAVPITIPVPEGSMPSKVWERLRKGGSLLGDPEERMMAEGQDGNTPGSGAVKASRDISRSMFGLSSPPHPXXXXXXXXPRWSSSLSAIFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSDVEEIALPLDILPCNKQPLAIDRRVDDLLRLLRPAPRAEGYRRSVFRFVTRQVR 1128
ASTGPTM GSY+SGGADQ AA+S GSGPGIMRRMSSISF+TGG+AGSAAAGFGGTSVPSAAIDMSDLNNLVKRVESANQLAMKVDSDDEDDAVDKLLEHQHQMMMRSSSSYSLASNPDA MQRLDRKESNDFFYMGSIDAGG+TQLP E D QE SPDV + DGDSRRGRNAAVPITIPVPEGSMPSKVWERL+KGGSL+GDPEERMMAEGQDGNTPGSG +ISRSMFGLSSP XX PRW SSL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXX LSD+EEIALP+DILP NKQPLAIDRRVDDLLRLLRPAPRAEGYRRSVFRFVTRQV+
Sbjct: 363 ASTGPTMYGGSYNSGGADQTAAYSLGSGPGIMRRMSSISFTTGGMAGSAAAGFGGTSVPSAAIDMSDLNNLVKRVESANQLAMKVDSDDEDDAVDKLLEHQHQMMMRSSSSYSLASNPDAGMQRLDRKESNDFFYMGSIDAGGSTQLPGEEDTQESSPDVA-IGEVADGDSRRGRNAAVPITIPVPEGSMPSKVWERLQKGGSLMGDPEERMMAEGQDGNTPGSGT-----EISRSMFGLSSPXXXXXGAPPNAPRWPSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVPAXXXXXXG----LSDIEEIALPMDILPSNKQPLAIDRRVDDLLRLLRPAPRAEGYRRSVFRFVTRQVK 721 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15787.3980.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15787.3980.1 >prot_E-fasciculatus_F_contig15787.3980.1 ID=prot_E-fasciculatus_F_contig15787.3980.1|Name=mRNA_E-fasciculatus_F_contig15787.3980.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=376bp AAPPRRRASTGPTMSAGSYHSGGADQAAAFSFGSGPGIMRRMSSISFSTGback to top mRNA from alignment at E-fasciculatus_F_contig15787:170..2930+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15787.3980.1 ID=mRNA_E-fasciculatus_F_contig15787.3980.1|Name=mRNA_E-fasciculatus_F_contig15787.3980.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2761bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15787:170..2930+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15787:170..2930+ >mRNA_E-fasciculatus_F_contig15787.3980.1 ID=mRNA_E-fasciculatus_F_contig15787.3980.1|Name=mRNA_E-fasciculatus_F_contig15787.3980.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2256bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15787:170..2930+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |