mRNA_E-fasciculatus_F_contig15671.3929.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15671.3929.1 vs. uniprot
Match: A0A6H5KF61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF61_9PHAE) HSP 1 Score: 196 bits (498), Expect = 5.360e-57 Identity = 95/106 (89.62%), Postives = 101/106 (95.28%), Query Frame = 2
Query: 341 RYEIKYPQMYAEQSDANAVIFNCYQRAHQNVLENYPPFLLLLGLAAINRPTVAAVAGAIRLAGFVAYVIGYRTGDPAKRHKGAFGYLGLITMLGCAIETAVRLGMS 658
+YEIKYPQMYAEQSD NAVIFNCYQRAHQNVLENYP FLLLLGLAAINRP VA VAGAIRLAGFVAYVIGYRTG+P KRHKGAFGY+GLITMLGCAIE+AV++GMS
Sbjct: 37 KYEIKYPQMYAEQSDPNAVIFNCYQRAHQNVLENYPSFLLLLGLAAINRPIVAGVAGAIRLAGFVAYVIGYRTGNPEKRHKGAFGYIGLITMLGCAIESAVKIGMS 142
BLAST of mRNA_E-fasciculatus_F_contig15671.3929.1 vs. uniprot
Match: D7FIN3_ECTSI (Microsomal Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIN3_ECTSI) HSP 1 Score: 188 bits (477), Expect = 6.390e-54 Identity = 91/121 (75.21%), Postives = 106/121 (87.60%), Query Frame = 2
Query: 296 ATLATYLALALGLLGR-YEIKYPQMYAEQSDANAVIFNCYQRAHQNVLENYPPFLLLLGLAAINRPTVAAVAGAIRLAGFVAYVIGYRTGDPAKRHKGAFGYLGLITMLGCAIETAVRLGM 655
A + T+ + +G+ + Y IKYPQMYA+QSDAN VIFNCYQRAHQNVLENYP FLLLLGLAAINRPT+A VAGA+RLAGFVAYVIGYRTGDP KRH+GAFGY+GL+TMLGCAIE+ V++ M
Sbjct: 21 AFVTTWAGVGVGMARKKYGIKYPQMYADQSDANGVIFNCYQRAHQNVLENYPSFLLLLGLAAINRPTIAGVAGAVRLAGFVAYVIGYRTGDPEKRHRGAFGYIGLLTMLGCAIESVVKVYM 141
BLAST of mRNA_E-fasciculatus_F_contig15671.3929.1 vs. uniprot
Match: D7FIN2_ECTSI (Microsomal Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIN2_ECTSI) HSP 1 Score: 162 bits (410), Expect = 3.990e-44 Identity = 78/106 (73.58%), Postives = 88/106 (83.02%), Query Frame = 2
Query: 341 RYEIKYPQMYAEQSDANAVIFNCYQRAHQNVLENYPPFLLLLGLAAINRPTVAAVAGAIRLAGFVAYVIGYRTGDPAKRHKGAFGYLGLITMLGCAIETAVRLGMS 658
+Y IKYPQMYAEQS+ NA +FNCYQRAHQNVLENYP FLLLLGLAAINRP AAVAGAIR+AGF+ YVI YR+G P R KGAFGY+GL MLGCA+E +L +S
Sbjct: 37 KYGIKYPQMYAEQSNPNAAVFNCYQRAHQNVLENYPQFLLLLGLAAINRPKFAAVAGAIRVAGFIVYVITYRSGGPDNRRKGAFGYIGLFMMLGCALEFTTKLCIS 142
BLAST of mRNA_E-fasciculatus_F_contig15671.3929.1 vs. uniprot
Match: W4FN59_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FN59_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.330e-34 Identity = 67/103 (65.05%), Postives = 76/103 (73.79%), Query Frame = 2
Query: 341 RYEIKYPQMYAEQSDANAVIFNCYQRAHQNVLENYPPFLLLLGLAAINRPTVAAVAGAIRLAGFVAYVIGYRTGDPAKRHKGAFGYLGLITMLGCAIETAVRL 649
RY IKYPQMYAE+ D N V FNC QRAHQNVLEN P FL LL +++ RP AA+AG +R+ GFV YVIGY TGDPAKR GAFGYLG + LG A E + RL
Sbjct: 40 RYNIKYPQMYAEKGDKNFVEFNCVQRAHQNVLENLPVFLALLFVSSAYRPAWAAIAGLVRVVGFVVYVIGYSTGDPAKRQYGAFGYLGFLVSLGLAFEASYRL 142
BLAST of mRNA_E-fasciculatus_F_contig15671.3929.1 vs. uniprot
Match: A0A1V9Y7C0_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y7C0_9STRA) HSP 1 Score: 134 bits (336), Expect = 1.760e-33 Identity = 65/102 (63.73%), Postives = 76/102 (74.51%), Query Frame = 2
Query: 344 YEIKYPQMYAEQSDANAVIFNCYQRAHQNVLENYPPFLLLLGLAAINRPTVAAVAGAIRLAGFVAYVIGYRTGDPAKRHKGAFGYLGLITMLGCAIETAVRL 649
Y+I+YPQMYAE+ D N FNC QRAHQN+LEN P F LL ++I RP AA+AG IR+AGF+AYV GY TGDP KR GAFGYLGL +G +IE AVRL
Sbjct: 39 YKIEYPQMYAERGDKNFNAFNCVQRAHQNMLENLPVFFTLLATSSIFRPGYAAIAGGIRVAGFIAYVQGYATGDPTKRMNGAFGYLGLFAAIGLSIEAAVRL 140
BLAST of mRNA_E-fasciculatus_F_contig15671.3929.1 vs. uniprot
Match: G4ZNA9_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZNA9_PHYSP) HSP 1 Score: 134 bits (336), Expect = 1.930e-33 Identity = 64/103 (62.14%), Postives = 77/103 (74.76%), Query Frame = 2
Query: 341 RYEIKYPQMYAEQSDANAVIFNCYQRAHQNVLENYPPFLLLLGLAAINRPTVAAVAGAIRLAGFVAYVIGYRTGDPAKRHKGAFGYLGLITMLGCAIETAVRL 649
++ + YPQMYAE+SD NA FNC QRAHQNVLEN P F +L ++I RP VAA AG +R+AGFV YV GY TGDP KR KG FGYLG + MLG ++E A+RL
Sbjct: 41 QFNVPYPQMYAEKSDKNANEFNCVQRAHQNVLENLPLFYAMLATSSIYRPKVAAAAGLVRIAGFVMYVKGYSTGDPGKRRKGNFGYLGTLVMLGLSLEAALRL 143
BLAST of mRNA_E-fasciculatus_F_contig15671.3929.1 vs. uniprot
Match: A0A225WXS0_9STRA (Microsomal Glutathione S-transferase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WXS0_9STRA) HSP 1 Score: 134 bits (336), Expect = 1.930e-33 Identity = 65/115 (56.52%), Postives = 84/115 (73.04%), Query Frame = 2
Query: 308 TYLALALGLLGR-YEIKYPQMYAEQSDANAVIFNCYQRAHQNVLENYPPFLLLLGLAAINRPTVAAVAGAIRLAGFVAYVIGYRTGDPAKRHKGAFGYLGLITMLGCAIETAVRL 649
T+ + +G+ + Y I YPQMYAE+ + NA FNC QRAHQNVLE+ P F +L ++I RPT+AA AG +RLAGFV YV GY +GDP KR KG FGYLG++ MLG ++E A+RL
Sbjct: 29 TWAGIKVGVARKQYNIPYPQMYAEKKEKNAKEFNCVQRAHQNVLEHLPLFYAMLATSSIYRPTIAAAAGVVRLAGFVMYVKGYSSGDPGKRRKGNFGYLGMLVMLGLSLEAALRL 143
BLAST of mRNA_E-fasciculatus_F_contig15671.3929.1 vs. uniprot
Match: H3GBW9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GBW9_PHYRM) HSP 1 Score: 131 bits (330), Expect = 1.360e-32 Identity = 61/103 (59.22%), Postives = 77/103 (74.76%), Query Frame = 2
Query: 341 RYEIKYPQMYAEQSDANAVIFNCYQRAHQNVLENYPPFLLLLGLAAINRPTVAAVAGAIRLAGFVAYVIGYRTGDPAKRHKGAFGYLGLITMLGCAIETAVRL 649
++ + YPQMYA + D NA FNC QRAHQNVLEN P F +L ++I RPT+AAVAG +R+AGFV YV GY +GDP KR +G FGYLG + MLG ++E A+RL
Sbjct: 41 QFNVPYPQMYAAKKDKNANAFNCVQRAHQNVLENLPLFYAMLATSSIYRPTIAAVAGVVRIAGFVMYVKGYSSGDPGKRRQGNFGYLGTLVMLGLSLEAALRL 143
BLAST of mRNA_E-fasciculatus_F_contig15671.3929.1 vs. uniprot
Match: A0A024ULQ9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024ULQ9_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.730e-32 Identity = 62/108 (57.41%), Postives = 78/108 (72.22%), Query Frame = 2
Query: 326 LGLLGRYEIKYPQMYAEQSDANAVIFNCYQRAHQNVLENYPPFLLLLGLAAINRPTVAAVAGAIRLAGFVAYVIGYRTGDPAKRHKGAFGYLGLITMLGCAIETAVRL 649
LG ++ I YPQMYAE+SD + FNCYQRAHQNVLEN P FL LL ++++ RPT AA+AG +R+ GFV YVIGY TG+P KR GAFG++ +G A+E A RL
Sbjct: 34 LGARKKFNINYPQMYAEKSDEHCHEFNCYQRAHQNVLENLPVFLALLFVSSVYRPTWAAIAGFVRVVGFVVYVIGYSTGEPGKRQYGAFGFIAFFASMGLAVEAACRL 141
BLAST of mRNA_E-fasciculatus_F_contig15671.3929.1 vs. uniprot
Match: A0A067CU62_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CU62_SAPPC) HSP 1 Score: 131 bits (329), Expect = 1.730e-32 Identity = 66/107 (61.68%), Postives = 74/107 (69.16%), Query Frame = 2
Query: 329 GLLGRYEIKYPQMYAEQSDANAVIFNCYQRAHQNVLENYPPFLLLLGLAAINRPTVAAVAGAIRLAGFVAYVIGYRTGDPAKRHKGAFGYLGLITMLGCAIETAVRL 649
G RY IKYPQMYAE SD N FNC QRAHQNVLEN P F LL ++I RP AA+AG +R+ GF+ YV GY TGDPAKR G FGYLGL LG +IE A+ L
Sbjct: 34 GARKRYNIKYPQMYAEVSDKNFNAFNCVQRAHQNVLENLPVFFALLITSSIYRPGYAAIAGLVRVLGFIVYVQGYATGDPAKRMHGGFGYLGLFASLGLSIEAAITL 140 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15671.3929.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15671.3929.1 >prot_E-fasciculatus_F_contig15671.3929.1 ID=prot_E-fasciculatus_F_contig15671.3929.1|Name=mRNA_E-fasciculatus_F_contig15671.3929.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=99bp MYAEQSDANAVIFNCYQRAHQNVLENYPPFLLLLGLAAINRPTVAAVAGAback to top mRNA from alignment at E-fasciculatus_F_contig15671:72..2877+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15671.3929.1 ID=mRNA_E-fasciculatus_F_contig15671.3929.1|Name=mRNA_E-fasciculatus_F_contig15671.3929.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2806bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15671:72..2877+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15671:72..2877+ >mRNA_E-fasciculatus_F_contig15671.3929.1 ID=mRNA_E-fasciculatus_F_contig15671.3929.1|Name=mRNA_E-fasciculatus_F_contig15671.3929.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=594bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15671:72..2877+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |