mRNA_E-fasciculatus_F_contig15651.3921.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15651.3921.1 vs. uniprot
Match: D8LKN7_ECTSI (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKN7_ECTSI) HSP 1 Score: 270 bits (689), Expect = 1.610e-81 Identity = 132/166 (79.52%), Postives = 137/166 (82.53%), Query Frame = 1
Query: 1 MRSRVLLKDRSCPECK-----MVVAKLPASGEAPRFETFNLWGDFAGPDSVFDDESGMVFYACQGHYDGLLRMRDLYCPVTGCKGAAAG--------------------ALMEHMKGCHQRFLCQLCLEGRPLFLSEQEVFTASGLRKHEARVEGGHPLCRFCNKR 423
MRSRVLLKDRSCPECK +VVA+LPASG+APRFETFNLWGDFAGPDSVFDDESGMVFYAC+GHYD LLRMRD YCPV GCKGAAAG ALMEHMKG HQRFLCQLCLEGRPLFLSEQEVFTASGLRKHEA+VEGGHPLCRFCNKR
Sbjct: 201 MRSRVLLKDRSCPECKTVQDRLVVAELPASGDAPRFETFNLWGDFAGPDSVFDDESGMVFYACRGHYDDLLRMRDPYCPVAGCKGAAAGGREGGKGCGVGGHELFPNIGALMEHMKGFHQRFLCQLCLEGRPLFLSEQEVFTASGLRKHEAKVEGGHPLCRFCNKR 366
BLAST of mRNA_E-fasciculatus_F_contig15651.3921.1 vs. uniprot
Match: A0A6H5JGR2_9PHAE (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGR2_9PHAE) HSP 1 Score: 259 bits (661), Expect = 1.830e-77 Identity = 131/188 (69.68%), Postives = 137/188 (72.87%), Query Frame = 1
Query: 1 MRSRVLLKDRSCPECK-----MVVAKLPASGEAPRFETFNLWGDFAGPDSVFDDESGMVFYACQGHYDGLLRMRDLYCPVTGCKGAAAG------------------------------------------ALMEHMKGCHQRFLCQLCLEGRPLFLSEQEVFTASGLRKHEARVEGGHPLCRFCNKR 423
MRSRVLLKDRSCPECK +VVA+LPAS +APRFETFNLWGDFAGPDSVFDDESGMVFYAC+GHYD LLRMRDLYCPVTGCKGAAAG ALMEH+K HQRFLC+LCLEGRPLFLSEQEVFTASGLRKHEARVEGGHPLCRFCNKR
Sbjct: 198 MRSRVLLKDRSCPECKTVQDRLVVAELPASRDAPRFETFNLWGDFAGPDSVFDDESGMVFYACRGHYDDLLRMRDLYCPVTGCKGAAAGGREGGQGCGVGGHELFPNIGVCVFSASYMRSICWSTLTTSTGALMEHLKDFHQRFLCELCLEGRPLFLSEQEVFTASGLRKHEARVEGGHPLCRFCNKR 385
BLAST of mRNA_E-fasciculatus_F_contig15651.3921.1 vs. uniprot
Match: A0A7S3Y343_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y343_HETAK) HSP 1 Score: 137 bits (345), Expect = 2.690e-36 Identity = 72/148 (48.65%), Postives = 92/148 (62.16%), Query Frame = 1
Query: 1 MRSRVLLKDRSCPEC-----KMVVAKLPASGEAPR-FETFNLWGDFAGPDSVFDDESGMVFYACQGHYDGLLRMRDLYCPVTGCKGAAAGALMEHMKGCHQ-RFLCQLCLEGRPLFLSEQEVFTASGLRKHEARVEGGHPLCRFCNKR 423
+R RV+LKDR CP C K+VVA+L G APR FE+F LWG+ A P++ D+E+ FYAC H++ L +R C V A AL EH++ H R C LC+E RP FL EQE++T LRKHEA + GGHPLC+FC R
Sbjct: 40 LRLRVVLKDRRCPTCRTPMDKVVVAQLH-EGAAPRPFESFGLWGEVAPPEAQLDEEANAYFYACPAHFEACLLLRAHVCGVCFAPQPGAAALREHLRRQHGGRAHCALCVEHRPKFLQEQELYTPQALRKHEAALAGGHPLCKFCQCR 186
BLAST of mRNA_E-fasciculatus_F_contig15651.3921.1 vs. uniprot
Match: A0A836C9D8_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9D8_9STRA) HSP 1 Score: 141 bits (355), Expect = 3.760e-36 Identity = 79/149 (53.02%), Postives = 94/149 (63.09%), Query Frame = 1
Query: 1 MRSRVLLKDRSCPECK-----MVVAKLPASGEAPR-FETFNLWGDFAGPDSVFDDESGMVFYACQGHYDGLLRMRDLYCPVTGC--KGAAAGALMEHMKGCHQRFLCQLCLEGRPLFLSEQEVFTASGLRKHEARVEGGHPLCRFCNKR 423
+RSRVLLK+RSCP CK ++VA L G APR + +F +WGD AGP S D +SGM+F C HY L R++ L C V C +GA AG HQR C LCLE RPLF EQE+F+A+ LRKHE V GGHPLCRFC R
Sbjct: 76 LRSRVLLKNRSCPICKADQEKVLVAALE-EGNAPRPYASFPVWGDTAGPGSELDADSGMLFIDCAAHYAELARLKSLQCTVAACPERGAVAGH--------HQRHYCALCLEHRPLFPPEQELFSAAALRKHEQGV-GGHPLCRFCGAR 214
BLAST of mRNA_E-fasciculatus_F_contig15651.3921.1 vs. uniprot
Match: M4BGM0_HYAAE (R3H domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BGM0_HYAAE) HSP 1 Score: 131 bits (330), Expect = 2.880e-33 Identity = 65/157 (41.40%), Postives = 90/157 (57.32%), Query Frame = 1
Query: 1 MRSRVLLKDRSCPECKMVVAKLPASGEAPRFETFNLWGDFAGPDSVFDDESGMVFYACQGHYDGLLRMRDLYCPVTGCKGA--AAGALMEHMKGCHQRFLCQLCLEGRPLFLSEQEVFTASGLRKHE-ARVEGG-------------HPLCRFCNKR 423
MR R+L+ DR CP CK +A++ S E FE+F LWGD AGPDSV D++S ++F AC+ HY L +R+ C + C+ + G L EH++ H C+LCL + F+ EQEVFT L+ H R +GG HP+C+FC KR
Sbjct: 1 MRMRLLMDDRHCPMCKQPLARVIVSREMRPFESFELWGDVAGPDSVLDEKSEIIFVACRAHYKELCSLREFQCRIKRCREVKHSLGQLKEHLRRDHGVEFCELCLTHQSFFIQEQEVFTKGALKGHNIGRSQGGLAGQKHANTGKDFHPMCQFCRKR 157
BLAST of mRNA_E-fasciculatus_F_contig15651.3921.1 vs. uniprot
Match: A0A662XHC5_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XHC5_9STRA) HSP 1 Score: 122 bits (307), Expect = 7.590e-31 Identity = 61/157 (38.85%), Postives = 86/157 (54.78%), Query Frame = 1
Query: 1 MRSRVLLKDRSCPECKMVVAKLPASGEAPRFETFNLWGDFAGPDSVFDDESGMVFYACQGHYDGLLRMRDLYCPVTGCKG--AAAGALMEHMKGCHQRFLCQLCLEGRPLFLSEQEVFTASGLRKHE-ARVEGG-------------HPLCRFCNKR 423
MR R+++ DR+CP CK + ++ S FE+F LWGD AGP+SV D+ S M+F C+ HY L +R+ C + C ++ G L EH++ H C+LCL + F+ EQEVFT L+ H R GG HP+C+FC KR
Sbjct: 184 MRMRLIMDDRNCPMCKQPLDRVVVSNAPRAFESFELWGDAAGPESVLDEPSEMIFVNCRAHYHALRSLREFKCRMKRCHEVKSSVGQLKEHLRRDHGVEFCELCLTHQTFFIQEQEVFTKGTLKSHNIGRNHGGPTAQKHANTGKDFHPMCQFCRKR 340
BLAST of mRNA_E-fasciculatus_F_contig15651.3921.1 vs. uniprot
Match: G4YVH3_PHYSP (RING-type E3 ubiquitin transferase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YVH3_PHYSP) HSP 1 Score: 124 bits (310), Expect = 3.840e-30 Identity = 61/157 (38.85%), Postives = 86/157 (54.78%), Query Frame = 1
Query: 1 MRSRVLLKDRSCPECKMVVAKLPASGEAPRFETFNLWGDFAGPDSVFDDESGMVFYACQGHYDGLLRMRDLYCPVTGCKGA--AAGALMEHMKGCHQRFLCQLCLEGRPLFLSEQEVFTASGLRKHE-ARVEGG-------------HPLCRFCNKR 423
MR R+++ DR+CP CK + ++ S FE+F LWGD AGP+SV D+ S M+F C+ HY L +R+ C + C+ + G L EH++ H C+LCL + F+ EQEVFT L+ H R GG HP+C+FC KR
Sbjct: 127 MRMRLIMDDRNCPMCKQPLERVVVSSAPRPFESFELWGDAAGPESVLDEPSDMIFVDCRAHYSELRSLREFKCRMKRCREVKHSLGQLKEHLRHDHAVEFCELCLTHQSFFIQEQEVFTKGALKGHNIGRSRGGPAGQKHANTGKDFHPMCQFCRKR 283
BLAST of mRNA_E-fasciculatus_F_contig15651.3921.1 vs. uniprot
Match: A0A662Y532_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y532_9STRA) HSP 1 Score: 124 bits (310), Expect = 3.990e-30 Identity = 61/157 (38.85%), Postives = 87/157 (55.41%), Query Frame = 1
Query: 1 MRSRVLLKDRSCPECKMVVAKLPASGEAPRFETFNLWGDFAGPDSVFDDESGMVFYACQGHYDGLLRMRDLYCPVTGCKG--AAAGALMEHMKGCHQRFLCQLCLEGRPLFLSEQEVFTASGLRKHE-ARVEGG-------------HPLCRFCNKR 423
MR R+++ DR+CP CK + ++ S FE+F LWGD AGP+SV D+ S M+F C+ HY L +R+ C + C+ ++ G L EH++ H C+LCL + F+ EQEVFT L+ H R GG HP+C+FC KR
Sbjct: 184 MRMRLIMDDRNCPMCKQPLDRVVVSNAPRAFESFELWGDAAGPESVLDEPSEMIFVNCRAHYHALRSLREFKCRMKRCREVESSVGQLKEHLRRDHGVEFCELCLTHQTFFIQEQEVFTKGTLKSHNIGRNHGGPTAQKHANTGKDFHPMCQFCRKR 340
BLAST of mRNA_E-fasciculatus_F_contig15651.3921.1 vs. uniprot
Match: A0A3F2RJA0_9STRA (RING-type E3 ubiquitin transferase n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJA0_9STRA) HSP 1 Score: 123 bits (309), Expect = 4.260e-30 Identity = 62/157 (39.49%), Postives = 86/157 (54.78%), Query Frame = 1
Query: 1 MRSRVLLKDRSCPECKMVVAKLPASGEAPRFETFNLWGDFAGPDSVFDDESGMVFYACQGHYDGLLRMRDLYCPVTGCKGA--AAGALMEHMKGCHQRFLCQLCLEGRPLFLSEQEVFTASGLRKHE-ARVEGG-------------HPLCRFCNKR 423
MR R+L+ DRSCP CK + ++ S FE+F LWGD AGP+SV D+ S ++F C+ HY L +R+ C + CK + G L EH++ H C+LCL + F+ EQEVF+ L+ H R GG HP+C+FC KR
Sbjct: 34 MRMRLLMDDRSCPMCKQPLERVVVSSTPRTFESFELWGDAAGPESVLDELSEIIFVDCRAHYHALRSLREFKCRLKRCKEVKHSLGQLKEHLRRDHNVEFCELCLTHQSFFIQEQEVFSKGTLKSHNIGRNHGGPGGQKHANTGKDFHPMCQFCRKR 190
BLAST of mRNA_E-fasciculatus_F_contig15651.3921.1 vs. uniprot
Match: A0A3M6VK50_9STRA (RING-type E3 ubiquitin transferase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VK50_9STRA) HSP 1 Score: 123 bits (309), Expect = 5.210e-30 Identity = 61/157 (38.85%), Postives = 86/157 (54.78%), Query Frame = 1
Query: 1 MRSRVLLKDRSCPECKMVVAKLPASGEAPRFETFNLWGDFAGPDSVFDDESGMVFYACQGHYDGLLRMRDLYCPVTGCKGA--AAGALMEHMKGCHQRFLCQLCLEGRPLFLSEQEVFTASGLRKHE-ARVEGG-------------HPLCRFCNKR 423
MR R+++ DR+CP CK + ++ S +E+F LWGD AGP+SV D++S M+F C+ HY L +R+ C + C+ G L EHM+ H C+LCL + F+ EQEVFT L+ H R GG HP+C+FC KR
Sbjct: 130 MRMRLIMDDRNCPMCKQPMERVVVSSSTRLYESFELWGDAAGPESVLDEKSEMIFVDCRAHYYELRSLREFNCRIKRCREMKHTLGQLKEHMRHDHGVEFCELCLTHQSFFIQEQEVFTKGALKGHNIGRSRGGSAGQKHANTGKDFHPMCQFCRKR 286 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15651.3921.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15651.3921.1 >prot_E-fasciculatus_F_contig15651.3921.1 ID=prot_E-fasciculatus_F_contig15651.3921.1|Name=mRNA_E-fasciculatus_F_contig15651.3921.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=142bp MRSRVLLKDRSCPECKMVVAKLPASGEAPRFETFNLWGDFAGPDSVFDDEback to top mRNA from alignment at E-fasciculatus_F_contig15651:156..1618+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15651.3921.1 ID=mRNA_E-fasciculatus_F_contig15651.3921.1|Name=mRNA_E-fasciculatus_F_contig15651.3921.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1463bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15651:156..1618+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15651:156..1618+ >mRNA_E-fasciculatus_F_contig15651.3921.1 ID=mRNA_E-fasciculatus_F_contig15651.3921.1|Name=mRNA_E-fasciculatus_F_contig15651.3921.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=852bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15651:156..1618+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |