mRNA_E-fasciculatus_F_contig15616.3898.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig15616.3898.1
Unique NamemRNA_E-fasciculatus_F_contig15616.3898.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig15616.3898.1 vs. uniprot
Match: D8LN90_ECTSI (UTP--glucose-1-phosphate uridylyltransferase n=4 Tax=Phaeophyceae TaxID=2870 RepID=D8LN90_ECTSI)

HSP 1 Score: 346 bits (887), Expect = 1.040e-109
Identity = 176/184 (95.65%), Postives = 178/184 (96.74%), Query Frame = 1 
Query:    1 NERTVRLDKLKEAIDASGGLIPLAMIKNGKTVDPQDDTSPKVFQLETAMGAAIECFKGAGAVAVPRYRFAPVKKCNDLLLLRSDAYVVNEHYNIVLAPERNGVAPVVSLDAKKYKLVQQLDAAMTSGTPSLIGCDRLTVSGDVQMAGNTVFKGTCSVVNKSGESKVLPPGEYADASVDLSEAEG 552
            N   VRLDKLKEAIDASGGLIPLAMIKNGKTVDPQDDTSPKVFQLETAMGAAIECFKGAGAVAVPR RFAPVKKCNDL LLRSDAYVVNEHYNIVLAPERNGVAPVVSLDAKKYKLVQQLDAAMT+GTPSLIGCDRLTVSGDVQMAG+TVFKGTCSVVNKSGESKVLP GEYADASVDLSEAEG
Sbjct:  297 NNLWVRLDKLKEAIDASGGLIPLAMIKNGKTVDPQDDTSPKVFQLETAMGAAIECFKGAGAVAVPRTRFAPVKKCNDLFLLRSDAYVVNEHYNIVLAPERNGVAPVVSLDAKKYKLVQQLDAAMTAGTPSLIGCDRLTVSGDVQMAGDTVFKGTCSVVNKSGESKVLPAGEYADASVDLSEAEG 480
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BLAST of mRNA_E-fasciculatus_F_contig15616.3898.1 vs. uniprot
Match: A0A6V1U5R2_HETAK (Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U5R2_HETAK)

HSP 1 Score: 251 bits (641), Expect = 1.310e-74
Identity = 128/184 (69.57%), Postives = 140/184 (76.09%), Query Frame = 1 
Query:    1 NERTVRLDKLKEAIDASGGLIPLAMIKNGKTVDPQDDTSPKVFQLETAMGAAIECFKGAGAVAVPRYRFAPVKKCNDLLLLRSDAYVVNEHYNIVLAPERNGVAPVVSLDAKKYKLVQQLDAAMTSGTPSLIGCDRLTVSGDVQMAGNTVFKGTCSVVNKSGESKVLPPGEYADASVDLSEAEG 552
            N   +RLDKLKEAIDA+GGLIPL MIKN KTVDPQD  S  VFQLETAMGAAIECF GAGAV VPR RFAPVKKCNDLL+LRSDAYVV E +  VLAPERNGVAPV+ LD+KK+KLVQQL+ A   G PSLI CDRL V G V       F+G  S+ N SGE K+LPPG Y D  VDL+ A G
Sbjct:  251 NNLWIRLDKLKEAIDAAGGLIPLPMIKNAKTVDPQDGNSTPVFQLETAMGAAIECFAGAGAVVVPRNRFAPVKKCNDLLMLRSDAYVVTEDHRPVLAPERNGVAPVIDLDSKKFKLVQQLEEATMMGVPSLIKCDRLKVKGTVYFNSRVAFEGNVSIENNSGEPKMLPPGLYKDTKVDLTHAPG 434
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BLAST of mRNA_E-fasciculatus_F_contig15616.3898.1 vs. uniprot
Match: A0A6U5DE44_9STRA (UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5DE44_9STRA)

HSP 1 Score: 224 bits (570), Expect = 1.270e-70
Identity = 110/184 (59.78%), Postives = 137/184 (74.46%), Query Frame = 1 
Query:    1 NERTVRLDKLKEAIDASGGLIPLAMIKNGKTVDPQDDTSPKVFQLETAMGAAIECFKGAGAVAVPRYRFAPVKKCNDLLLLRSDAYVVNEHYNIVLAPERNGVAPVVSLDAKKYKLVQQLDAAMTSGTPSLIGCDRLTVSGDVQMAGNTVFKGTCSVVNKSGESKVLPPGEYADASVDLSEAEG 552
            N   +RLDKLKE ++ SGG IPL MIKN KTVDP+DD S KV QLETAMGAAIECF GA A+ VPR RFAPVKKCNDLLLLRSDAY++ + +   L PE NGVAPV++LD+KKYKLV  LD A+ +G PSL  C RLTV+G+V    NT F G  S+VN++ E+KV+P G   +  ++++  +G
Sbjct:   82 NNLWIRLDKLKEIVEKSGGFIPLPMIKNSKTVDPKDDESQKVVQLETAMGAAIECFSGASAIVVPRTRFAPVKKCNDLLLLRSDAYIITDDFCAQLNPECNGVAPVIALDSKKYKLVSALDKAIPNGVPSLFKCARLTVTGEVIFQSNTKFVGNVSIVNEAAEAKVVPAGTLKNKDLNITHPQG 265
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BLAST of mRNA_E-fasciculatus_F_contig15616.3898.1 vs. uniprot
Match: A0A7S4NAP1_9STRA (UTP--glucose-1-phosphate uridylyltransferase (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NAP1_9STRA)

HSP 1 Score: 231 bits (589), Expect = 2.130e-69
Identity = 115/184 (62.50%), Postives = 140/184 (76.09%), Query Frame = 1 
Query:    1 NERTVRLDKLKEAIDASGGLIPLAMIKNGKTVDPQDDTSPKVFQLETAMGAAIECFKGAGAVAVPRYRFAPVKKCNDLLLLRSDAYVVNEHYNIVLAPERNGVAPVVSLDAKKYKLVQQLDAAMTSGTPSLIGCDRLTVSGDVQMAGNTVFKGTCSVVNKSGESKVLPPGEYADASVDLSEAEG 552
            N   +RLDKLKE ID  GG IPL MI+N KTVDP+D +S KV QLETAMGAAIECF+GA A+ VPR RFAPVKKCNDLLLLRSDAYV+ + +  VL P   GVAPVV++D+KKYKLV++L+ A  SG PSL+GC RLT+ G V+M  +T F G  S+ N S ESK +P GE  DA++DL++A G
Sbjct:  287 NNLWIRLDKLKEIIDKFGGFIPLPMIQNAKTVDPKDSSSQKVVQLETAMGAAIECFEGASAIVVPRTRFAPVKKCNDLLLLRSDAYVITDDHRAVLNPACGGVAPVVAIDSKKYKLVEKLEEATASGVPSLVGCKRLTIKGLVRMGKSTKFVGEVSITNSSDESKAVPTGEVKDATMDLTDAVG 470
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BLAST of mRNA_E-fasciculatus_F_contig15616.3898.1 vs. uniprot
Match: W7T5H8_9STRA (UTP--glucose-1-phosphate uridylyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T5H8_9STRA)

HSP 1 Score: 236 bits (602), Expect = 5.290e-69
Identity = 121/184 (65.76%), Postives = 137/184 (74.46%), Query Frame = 1 
Query:    1 NERTVRLDKLKEAIDASGGLIPLAMIKNGKTVDPQDDTSPKVFQLETAMGAAIECFKGAGAVAVPRYRFAPVKKCNDLLLLRSDAYVVNEHYNIVLAPERNGVAPVVSLDAKKYKLVQQLDAAMTSGTPSLIGCDRLTVSGDVQMAGNTVFKGTCSVVNKSGESKVLPPGEYADASVDLSEAEG 552
            N   VRLDKLKEA  A+GGLIPL MIKNGKTVDP+D  SPKV+QLETAMGAAIECF G+ AV VPR RF PVKKCNDLLLLRSD YV+       L P R G AP+++LD K YKLVQQL+AA   GTPSL+G DRLT+ G V ++   VF+GT +V NK  E KVLP G Y DASVDL+ A G
Sbjct:  293 NNLWVRLDKLKEATIAAGGLIPLPMIKNGKTVDPKDGKSPKVWQLETAMGAAIECFPGSSAVVVPRTRFVPVKKCNDLLLLRSDTYVLTADGTPALDPSRRGAAPLINLDDKAYKLVQQLEAATQGGTPSLVGADRLTIQGQVWLSSGVVFQGTTTVTNKGDEPKVLPKGVYKDASVDLTAAPG 476
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BLAST of mRNA_E-fasciculatus_F_contig15616.3898.1 vs. uniprot
Match: A0A836CGV2_9STRA (UTP--glucose-1-phosphate uridylyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGV2_9STRA)

HSP 1 Score: 236 bits (602), Expect = 5.690e-69
Identity = 123/185 (66.49%), Postives = 141/185 (76.22%), Query Frame = 1 
Query:    1 NERTVRLDKLKEAIDASGGLIPLAMIKNGKTVDPQDDTSPKVFQLETAMGAAIECFKGAGAVAVPRYRFAPVKKCNDLLLLRSDAYVVNEHYNIVLAPE-RNGVAPVVSLDAKKYKLVQQLDAAMTSGTPSLIGCDRLTVSGDVQMAGNTVFKGTCSVVNKSGESKVLPPGEYADASVDLSEAEG 552
            N   +RLD+LK+AI A+GGLIPL MIKN KTVDPQDD S  V QLETAMGAAIECF+GAGAV VPR RFAPVKKC+DLLLLRSDAYVVN+ YNIVLAPE   G AP+V LD+KK+KLVQQLDAA   G PSLI C+R TV G V ++   + KG  +V N S E K L P EY D + DL++A G
Sbjct:  293 NNLWIRLDRLKDAIAAAGGLIPLPMIKNPKTVDPQDDKSTPVLQLETAMGAAIECFEGAGAVVVPRTRFAPVKKCSDLLLLRSDAYVVNDAYNIVLAPEVAGGAAPLVDLDSKKFKLVQQLDAATARGVPSLIACERFTVKGLVALSARCIIKGDVTVKNTSDEVKTLAPREYKDETCDLTDAPG 477
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BLAST of mRNA_E-fasciculatus_F_contig15616.3898.1 vs. uniprot
Match: A0A7S1B4F8_9STRA (UTP--glucose-1-phosphate uridylyltransferase n=5 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B4F8_9STRA)

HSP 1 Score: 225 bits (573), Expect = 1.410e-68
Identity = 110/184 (59.78%), Postives = 137/184 (74.46%), Query Frame = 1 
Query:    1 NERTVRLDKLKEAIDASGGLIPLAMIKNGKTVDPQDDTSPKVFQLETAMGAAIECFKGAGAVAVPRYRFAPVKKCNDLLLLRSDAYVVNEHYNIVLAPERNGVAPVVSLDAKKYKLVQQLDAAMTSGTPSLIGCDRLTVSGDVQMAGNTVFKGTCSVVNKSGESKVLPPGEYADASVDLSEAEG 552
            N   +RLDKLKE ++ SGG IPL MIKN KTVDP+DD S KV QLETAMGAAIECF GA A+ VPR RFAPVKKCNDLLLLRSDAY++ + +   L PE NGVAPV++LD+KKYKLV  LD A+ +G PSL  C RLTV+G+V    NT F G  S+VN++ E+KV+P G   +  ++++  +G
Sbjct:  288 NNLWIRLDKLKEIVEKSGGFIPLPMIKNSKTVDPKDDESQKVVQLETAMGAAIECFSGASAIVVPRTRFAPVKKCNDLLLLRSDAYIITDDFRAQLNPECNGVAPVIALDSKKYKLVSALDKAIPNGVPSLFKCARLTVTGEVIFQSNTKFVGNVSIVNEAAEAKVVPAGTLKNKDLNITHPQG 471
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BLAST of mRNA_E-fasciculatus_F_contig15616.3898.1 vs. uniprot
Match: A0A2P4YJM6_9STRA (Phosphoglucomutase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YJM6_9STRA)

HSP 1 Score: 231 bits (588), Expect = 4.890e-68
Identity = 115/184 (62.50%), Postives = 140/184 (76.09%), Query Frame = 1 
Query:    1 NERTVRLDKLKEAIDASGGLIPLAMIKNGKTVDPQDDTSPKVFQLETAMGAAIECFKGAGAVAVPRYRFAPVKKCNDLLLLRSDAYVVNEHYNIVLAPERNGVAPVVSLDAKKYKLVQQLDAAMTSGTPSLIGCDRLTVSGDVQMAGNTVFKGTCSVVNKSGESKVLPPGEYADASVDLSEAEG 552
            N   +RLDKL+E +   GG+I L MIKN KTVDP+D +S  V+QLETAMGAAIECF GAGAV VPR RFAPVKKC+DL+LLRSDAYV+ E Y  V+APER GVAP+VSLD+K +KLVQQL+AA+    PSLI CDRL ++G+V  A   VF+G+  VVNKS E K +  G Y D +VDL+E +G
Sbjct:   47 NNLWIRLDKLQEELKKQGGVIRLPMIKNSKTVDPKDSSSTPVYQLETAMGAAIECFDGAGAVCVPRTRFAPVKKCDDLILLRSDAYVITEDYRPVIAPEREGVAPIVSLDSKNFKLVQQLEAAVRGNVPSLIKCDRLKITGNVGFAPGVVFEGSVEVVNKSSEQKTVLAGTYKDTTVDLTEQKG 230
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BLAST of mRNA_E-fasciculatus_F_contig15616.3898.1 vs. uniprot
Match: A0A2D4BR66_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BR66_PYTIN)

HSP 1 Score: 231 bits (590), Expect = 1.390e-67
Identity = 114/184 (61.96%), Postives = 138/184 (75.00%), Query Frame = 1 
Query:    1 NERTVRLDKLKEAIDASGGLIPLAMIKNGKTVDPQDDTSPKVFQLETAMGAAIECFKGAGAVAVPRYRFAPVKKCNDLLLLRSDAYVVNEHYNIVLAPERNGVAPVVSLDAKKYKLVQQLDAAMTSGTPSLIGCDRLTVSGDVQMAGNTVFKGTCSVVNKSGESKVLPPGEYADASVDLSEAEG 552
            N   +RLDKL E +   GG+I L MIKN KTVDP+D +S  VFQLETAMGAAIECF GAGAV VPR RFAPVKKC+DLLLLRSDAYV+ E Y  V+AP+RNGVAP+V LD K +KLVQQL+AA+    PSL+ CDRL ++G V  A   VF+G+ +VVN S E K + PG Y D ++DL+E +G
Sbjct:  212 NNLWIRLDKLAEELKKQGGVIRLPMIKNSKTVDPKDSSSTPVFQLETAMGAAIECFDGAGAVCVPRTRFAPVKKCDDLLLLRSDAYVITEDYRPVIAPQRNGVAPIVGLDGKTFKLVQQLEAALRGNVPSLVKCDRLKITGKVGFASGVVFEGSITVVNNSSEEKTVLPGVYKDTTIDLTEQKG 395
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BLAST of mRNA_E-fasciculatus_F_contig15616.3898.1 vs. uniprot
Match: A0A7S2I286_9STRA (UTP--glucose-1-phosphate uridylyltransferase (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I286_9STRA)

HSP 1 Score: 229 bits (585), Expect = 1.690e-67
Identity = 115/184 (62.50%), Postives = 139/184 (75.54%), Query Frame = 1 
Query:    1 NERTVRLDKLKEAIDASGGLIPLAMIKNGKTVDPQDDTSPKVFQLETAMGAAIECFKGAGAVAVPRYRFAPVKKCNDLLLLRSDAYVVNEHYNIVLAPERNGVAPVVSLDAKKYKLVQQLDAAMTSGTPSLIGCDRLTVSGDVQMAGNTVFKGTCSVVNKSGESKVLPPGEYADASVDLSEAEG 552
            N   +RLDKLKE ID  GG IPL MIKN KTVDP+DD+S KV QLETAMGAAIECF+GA A+ VPR RFAPVKKCNDLLLLRSDAYVV + + +VL P   G APV+++D+KKYKLV +L+AA   G PSL+ C RLT+ G V+M+  T F G  SVVN S E+K +P GE  D S+DL+++ G
Sbjct:  286 NNLWIRLDKLKEIIDKFGGFIPLPMIKNNKTVDPKDDSSQKVVQLETAMGAAIECFEGASAIVVPRTRFAPVKKCNDLLLLRSDAYVVTDDFRMVLNPACGGTAPVMAIDSKKYKLVDKLEAATAGGIPSLVNCKRLTIKGLVRMSKKTSFVGEVSVVNTSDEAKFIPVGEVKDTSLDLTDSPG 469
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15616.3898.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN90_ECTSI1.040e-10995.65UTP--glucose-1-phosphate uridylyltransferase n=4 T... [more]
A0A6V1U5R2_HETAK1.310e-7469.57Phosphoglucomutase (alpha-D-glucose-1,6-bisphospha... [more]
A0A6U5DE44_9STRA1.270e-7059.78UTP--glucose-1-phosphate uridylyltransferase n=1 T... [more]
A0A7S4NAP1_9STRA2.130e-6962.50UTP--glucose-1-phosphate uridylyltransferase (Frag... [more]
W7T5H8_9STRA5.290e-6965.76UTP--glucose-1-phosphate uridylyltransferase n=2 T... [more]
A0A836CGV2_9STRA5.690e-6966.49UTP--glucose-1-phosphate uridylyltransferase-domai... [more]
A0A7S1B4F8_9STRA1.410e-6859.78UTP--glucose-1-phosphate uridylyltransferase n=5 T... [more]
A0A2P4YJM6_9STRA4.890e-6862.50Phosphoglucomutase (Fragment) n=1 Tax=Phytophthora... [more]
A0A2D4BR66_PYTIN1.390e-6761.96Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A7S2I286_9STRA1.690e-6762.50UTP--glucose-1-phosphate uridylyltransferase (Frag... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15616contigE-fasciculatus_F_contig15616:251..2399 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score348.6
Seed ortholog evalue1.8e-93
Seed eggNOG ortholog2880.D8LN90
Preferred namePGM2
KEGG rclassRC00002,RC00408
KEGG koko:K00963,ko:K01835
KEGG ReactionR00289,R00959,R01057,R08639
KEGG Pathwayko00010,ko00030,ko00040,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00040,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130
KEGG ModuleM00129,M00361,M00362,M00549
GOsGO:0000271,GO:0003674,GO:0003824,GO:0004614,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0005982,GO:0005996,GO:0006006,GO:0006012,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009059,GO:0009250,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009581,GO:0009582,GO:0009590,GO:0009605,GO:0009628,GO:0009629,GO:0009987,GO:0010035,GO:0010038,GO:0010319,GO:0015980,GO:0016020,GO:0016051,GO:0016052,GO:0016853,GO:0016866,GO:0016868,GO:0019252,GO:0019318,GO:0019320,GO:0019388,GO:0031967,GO:0031975,GO:0033692,GO:0034637,GO:0034645,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046365,GO:0046686,GO:0050896,GO:0051606,GO:0055114,GO:0071704,GO:0071944,GO:1901575,GO:1901576
EggNOG free text desc.Utp--glucose-1-phosphate uridylyltransferase
EggNOG OGsCOG0033@1,COG4284@1,KOG0625@2759,KOG2638@2759
EC2.7.7.9,5.4.2.2
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionUTP--glucose-1-phosphate uridylyltransferase family
Ec32 orthologEc-16_004100.1
Exons4
Model size558
Cds size558
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15616.3898.1prot_E-fasciculatus_F_contig15616.3898.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig15616 251..2399 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928036.5383315-CDS-E-fasciculatus_F_contig15616:250..3731622928036.5383315-CDS-E-fasciculatus_F_contig15616:250..373Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15616 251..373 +
1695995797.8287098-CDS-E-fasciculatus_F_contig15616:250..3731695995797.8287098-CDS-E-fasciculatus_F_contig15616:250..373Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15616 251..373 +
1622928036.5527725-CDS-E-fasciculatus_F_contig15616:1003..11791622928036.5527725-CDS-E-fasciculatus_F_contig15616:1003..1179Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15616 1004..1179 +
1695995797.8398666-CDS-E-fasciculatus_F_contig15616:1003..11791695995797.8398666-CDS-E-fasciculatus_F_contig15616:1003..1179Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15616 1004..1179 +
1622928036.5644464-CDS-E-fasciculatus_F_contig15616:1571..17281622928036.5644464-CDS-E-fasciculatus_F_contig15616:1571..1728Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15616 1572..1728 +
1695995797.8492491-CDS-E-fasciculatus_F_contig15616:1571..17281695995797.8492491-CDS-E-fasciculatus_F_contig15616:1571..1728Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15616 1572..1728 +
1622928036.5787873-CDS-E-fasciculatus_F_contig15616:2297..23991622928036.5787873-CDS-E-fasciculatus_F_contig15616:2297..2399Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15616 2298..2399 +
1695995797.8600368-CDS-E-fasciculatus_F_contig15616:2297..23991695995797.8600368-CDS-E-fasciculatus_F_contig15616:2297..2399Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15616 2298..2399 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig15616.3898.1

>prot_E-fasciculatus_F_contig15616.3898.1 ID=prot_E-fasciculatus_F_contig15616.3898.1|Name=mRNA_E-fasciculatus_F_contig15616.3898.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=186bp
NERTVRLDKLKEAIDASGGLIPLAMIKNGKTVDPQDDTSPKVFQLETAMG
AAIECFKGAGAVAVPRYRFAPVKKCNDLLLLRSDAYVVNEHYNIVLAPER
NGVAPVVSLDAKKYKLVQQLDAAMTSGTPSLIGCDRLTVSGDVQMAGNTV
FKGTCSVVNKSGESKVLPPGEYADASVDLSEAEGA*
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mRNA from alignment at E-fasciculatus_F_contig15616:251..2399+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig15616.3898.1 ID=mRNA_E-fasciculatus_F_contig15616.3898.1|Name=mRNA_E-fasciculatus_F_contig15616.3898.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2149bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15616:251..2399+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AACGAACGAACCGTCAGGTTGGACAAGCTTAAGGAGGCGATCGACGCGTC
GGGCGGCCTGATCCCTCTGGCGATGATCAAGAACGGAAAGACTGTCGACC
CGCAGGACGACACCTCTCCCAAGGTGAAAAAAAACAGCGGTGTTGTTACC
ATTTTGTTTCTCTATGAAAGCAGGTGCATTAACGAGGGATCACAAAACAG
GAGCCGATTTTTTGCCCCGACACACAGTTCTAAAGTGCTGCCGTTTTGGT
GCCCGGCTTTCGTTGCTGTCTGCCTCTGTGTGCTTGGTGTGAGCTTTTGT
GTATAATAGCGTGCCAACCTTTGGTTGCTTCAATGGTTTATTTGCAAGGA
GAGCCCCCGTGCGTTCCACGGATTTGGACTCATTCGGGAGTACTGCTTTG
TTTTTGCTGCGCTCTTTTCCGTTTGTGGGTGGAAAAGCAGTGCATACAGC
GCTGTTTTTGAAGCTGCTCCGTCGAAAACGTAACTGCTGTCGCGTCACCC
TGTGTCCTCTGGGAAGTTAGACCGCCTTCTGGACGTGATGTCATCATCCC
CGAGTCCAACGGCGCGGCGACGCGCACAACACACACGGTCCGGGCGGTGG
GCCAAAAAATAACTTTTAAGTACACGGTTCTGCCACCGTCGCCCGCCGTT
GCTGCCACTGACTATGCCGCCGCCGGTGCCTGTTGCATCCACGACTGTCA
TATTTTTATTTCGTTTTTCCCCGTATCCCCCGCCCCGCCCCCCGCCCCCG
CAGGTGTTCCAGCTGGAGACGGCGATGGGCGCGGCGATCGAGTGCTTCAA
GGGCGCCGGGGCGGTGGCGGTGCCGCGGTACCGGTTCGCGCCGGTGAAGA
AGTGCAACGACCTCCTCCTCCTCCGGTCGGACGCCTACGTGGTGAACGAG
CACTACAACATCGTACTCGCCCCGGAGAGGTGAGAGAAAAGACAGGAAAA
GGGAGAGAGAGAGGGGGGGGGGAGGGGGGGGCGGGGGCAGAGACAGAGAG
ACGCACACTATGAGGAAGATCTAGTTGTTTTTAGGCCGGGGGGCGGGGAT
GATGTGCTATTGGATGTGACCTCTATTCTTGTCCTCTGTGTGGATAGGTT
TGGGATCAAAGACGCATCAAGTATGAGGTTGCCTTTCGTACCTGTTCTGC
CCGCGCTCAGGGCACAGAACGGGGTGAACACTTACGGGCAGGATATTGAG
CCGGCGTTGTTTTGAGGTTGTCCTCCGTTGTTCCTCTTTATTTGTGCCTA
AATGTAGACAAGTGTTGGCGAAAGCTCTCCTAATCATCTTTGTCCTTGTT
CTTGCGCCGCGCTGCTCTCAGGAACGGCGTCGCTCCCGTGGTCTCTCTCG
ACGCGAAGAAGTACAAGCTGGTGCAGCAGCTCGACGCCGCTATGACGTCT
GGGACTCCCAGCCTCATTGGCTGCGACCGCCTTACCGTGTCCGGAGACGT
GCAGATGGCGGGCAACACGGTGTTCAAGGTGATTATTCCCACTTCCTCCG
GCAACCTTTTGTGTACGTCTTGACGAGAAACGCTACAGCAGAGTATGTAG
GCTCCAGACTGATTGTTTCCGTGTTTCGTGGAGCTAATATAGCAAGCAGA
CCGTGCACCACTTGATGAGAATGCCATGACAGCAGTGTGGTACGGTGCTG
CTCACACGTGACGTGCCTTGTTGCAAATGCCTCGCCATAGACACCTCGCC
CCCAAACCTAGTAGCACAATGAAAACCTGGATGGGCTGGTTTTTGACGCC
TTGGTAAGTAGCTTTCCCCTTCCCCGGCCCTCTTCTGCGCAAGCCAATAT
TTACGCACGCACTGCGGTGTATGGTGCATATGACGCTTCTACAGACGTGG
TCTGGTTAAACGTTTGTCTAGATTTATTCTCACCGGCGCTATTGCTGCAA
GCACCCAACACCACCCCGTTGTTGAGCATCGCGTTTGTCGGGTGTTATTG
TCATCGGCACTAGTAAACTGTAGTGTAGTGCTTGTATAAACCAACAACAC
CCGTACCTCCCCACCGGTCATGATGTGTGTGCTTCATCGCGATGTAGGGG
ACGTGCAGCGTGGTCAACAAGTCCGGGGAGAGCAAGGTGCTGCCTCCCGG
AGAGTACGCCGACGCCTCCGTCGACCTGTCCGAGGCCGAGGGTGCGTAA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15616:251..2399+

>mRNA_E-fasciculatus_F_contig15616.3898.1 ID=mRNA_E-fasciculatus_F_contig15616.3898.1|Name=mRNA_E-fasciculatus_F_contig15616.3898.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1116bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15616:251..2399+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AACGAACGAACCGTCAGGTTGGACAAGCTTAAGGAGGCGATCGACGCGTC
GGGCGGCCTGATCCCTCTGGCGATGATCAAGAACGGAAAGACTGTCGACC
CGCAGGACGACACCTCTCCCAAGAACGAACGAACCGTCAGGTTGGACAAG
CTTAAGGAGGCGATCGACGCGTCGGGCGGCCTGATCCCTCTGGCGATGAT
CAAGAACGGAAAGACTGTCGACCCGCAGGACGACACCTCTCCCAAGGTGT
TCCAGCTGGAGACGGCGATGGGCGCGGCGATCGAGTGCTTCAAGGGCGCC
GGGGCGGTGGCGGTGCCGCGGTACCGGTTCGCGCCGGTGAAGAAGTGCAA
CGACCTCCTCCTCCTCCGGTCGGACGCCTACGTGGTGAACGAGCACTACA
ACATCGTACTCGCCCCGGAGAGGTGTTCCAGCTGGAGACGGCGATGGGCG
CGGCGATCGAGTGCTTCAAGGGCGCCGGGGCGGTGGCGGTGCCGCGGTAC
CGGTTCGCGCCGGTGAAGAAGTGCAACGACCTCCTCCTCCTCCGGTCGGA
CGCCTACGTGGTGAACGAGCACTACAACATCGTACTCGCCCCGGAGAGGA
ACGGCGTCGCTCCCGTGGTCTCTCTCGACGCGAAGAAGTACAAGCTGGTG
CAGCAGCTCGACGCCGCTATGACGTCTGGGACTCCCAGCCTCATTGGCTG
CGACCGCCTTACCGTGTCCGGAGACGTGCAGATGGCGGGCAACACGGTGT
TCAAGGAACGGCGTCGCTCCCGTGGTCTCTCTCGACGCGAAGAAGTACAA
GCTGGTGCAGCAGCTCGACGCCGCTATGACGTCTGGGACTCCCAGCCTCA
TTGGCTGCGACCGCCTTACCGTGTCCGGAGACGTGCAGATGGCGGGCAAC
ACGGTGTTCAAGGGGACGTGCAGCGTGGTCAACAAGTCCGGGGAGAGCAA
GGTGCTGCCTCCCGGAGAGTACGCCGACGCCTCCGTCGACCTGTCCGAGG
CCGAGGGTGCGTAAGGGACGTGCAGCGTGGTCAACAAGTCCGGGGAGAGC
AAGGTGCTGCCTCCCGGAGAGTACGCCGACGCCTCCGTCGACCTGTCCGA
GGCCGAGGGTGCGTAA
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