mRNA_E-fasciculatus_F_contig156.3889.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig156.3889.1
Unique NamemRNA_E-fasciculatus_F_contig156.3889.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig156.3889.1 vs. uniprot
Match: D7G6E1_ECTSI (NFACT-R_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6E1_ECTSI)

HSP 1 Score: 385 bits (989), Expect = 4.320e-134
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 1 
Query:   79 MVFYFTSSDGHMLYMGKDKYENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNAIVNALNRTKREEHPNLAELQEERAKEHRREQKALRKKKXXXXXXXXXXXXXXXXLRSYDTLFEESKMASNADVAATEDASASIAFEDDFMVR 723
            MVFYFTSSDGHMLYMGKDKYENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNAIVNALNRTKREEHPNLAELQEERAKEHRREQKALRKKKXXXXXXXXXXXXXXXXLRSYDTLFEESKMASNADVAATEDASASIAFEDDFMVR
Sbjct:    1 MVFYFTSSDGHMLYMGKDKYENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNAIVNALNRTKREEHPNLAELQEERAKEHRREQKALRKKKXXXXXXXXXXXXXXXXLRSYDTLFEESKMASNADVAATEDASASIAFEDDFMVR 215
[Close]
BLAST of mRNA_E-fasciculatus_F_contig156.3889.1 vs. uniprot
Match: A0A6H5KW36_9PHAE (NFACT-R_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW36_9PHAE)

HSP 1 Score: 275 bits (704), Expect = 1.460e-91
Identity = 162/164 (98.78%), Postives = 162/164 (98.78%), Query Frame = 1 
Query:  226 MNRGEKLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNAIVNALNRTKREEHPNLAELQEERAKEHRREQKALRKKKXXXXXXXXXXXXXXXXLRSYDTLFEESKMASNADVAATEDASASIAFEDDFM 717
            MNRGEKLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNAIVNALNRTKREEHPNLAELQEERAKEHRREQKALRKKK XXXXXXXXXXXXXX LRSYDTLFEESKMASNADVAATEDASASIAFEDDFM
Sbjct:    1 MNRGEKLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNAIVNALNRTKREEHPNLAELQEERAKEHRREQKALRKKKEXXXXXXXXXXXXXXRLRSYDTLFEESKMASNADVAATEDASASIAFEDDFM 164
[Close]
BLAST of mRNA_E-fasciculatus_F_contig156.3889.1 vs. uniprot
Match: A0A835Z4I1_9STRA (NFACT-R_1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4I1_9STRA)

HSP 1 Score: 275 bits (704), Expect = 8.600e-91
Identity = 142/216 (65.74%), Postives = 170/216 (78.70%), Query Frame = 1 
Query:   82 VFYFTSSDGHMLYMGKDKYENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNAIVNALNRTKREEHPNLAELQEERAKEHRREQKALRKKKXXXXXXXXXXXXXXXXLRSYDTLFEESKMASNADVA----ATEDASASIAFEDDFM 717
            +++FT+S GH LYMGKDKYENEDLIRYG PEDVWFHVDNLSSAHVYLRMN+GEKLKE+ P +++ECC LVKANSIEGCK+K+V VVYTRW NL K  S EAGQVG+KDES+V K RVEK NAIVNALNR+K E  P+L  LQEERA E RREQKA+RK++                +RSYD+LF+E KMA + +V+    A+ED S+++AFEDDFM
Sbjct:    1 MYFFTASSGHTLYMGKDKYENEDLIRYGLPEDVWFHVDNLSSAHVYLRMNKGEKLKEVLPEVIMECCQLVKANSIEGCKKKDVEVVYTRWMNLRKSNSMEAGQVGFKDESKVHKVRVEKNNAIVNALNRSKTEASPDLQALQEERAAEIRREQKAVRKQQEQAEKIARRQAEEDKRMRSYDSLFDEGKMAGSTNVSNPYGASEDQSSAVAFEDDFM 216
[Close]
BLAST of mRNA_E-fasciculatus_F_contig156.3889.1 vs. uniprot
Match: B8C9M3_THAPS (NFACT-R_1 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9M3_THAPS)

HSP 1 Score: 200 bits (509), Expect = 3.780e-61
Identity = 112/221 (50.68%), Postives = 141/221 (63.80%), Query Frame = 1 
Query:   79 MVFYFTSSDG-HMLYMGKDKYENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKAS-------YEAGQVGYKDESRVFKCRVEKTNAIVNALNRTKREEHPNLAELQEERAKEHRREQKALRKKKXXXXXXXXXXXXXXXXLRSYDTLFEESKMASNADVAATEDASASIAFEDDFM 717
            MV+YFT+  G + +YMGKDKYENEDLI+YG PED WFHVD+LSSAHVYLR+  G  L ++    L +CC LVKANSI+GCK+  V VVYTRW+NL+K +S          GQVG+     V +  +EK N IVN LN+TK E+HPNLA+ Q++R KE + E K  RK                   RSYD +  E  M SNA+  AT D++A+  FEDDFM
Sbjct:    1 MVYYFTTRCGNYTIYMGKDKYENEDLIKYGHPEDCWFHVDDLSSAHVYLRLKPGMTLDDIPEDCLTDCCALVKANSIQGCKKSSVYVVYTRWKNLKKASSTCQDTSDMVDGQVGFHRPDNVRRTNIEKNNPIVNQLNKTKEEKHPNLAKQQQDRMKEIQTELKEKRKADDKAKRLEELERARIKEERSYDRIMGEHNMTSNAERNATADSTAAEEFEDDFM 221
[Close]
BLAST of mRNA_E-fasciculatus_F_contig156.3889.1 vs. uniprot
Match: A0A6U6DJ37_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6DJ37_9STRA)

HSP 1 Score: 197 bits (502), Expect = 3.470e-60
Identity = 122/214 (57.01%), Postives = 155/214 (72.43%), Query Frame = 1 
Query:   79 MVFYFTSSDGH-MLYMGKDKYENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNAIVNALNRTKREEHPNLAELQEERAKEHRREQKALRKKKXXXXXXXXXXXXXXXXLRSYDTLFEESKMASNADVAATEDASASIAFEDDFM 717
            MVFYF++  G+ MLYMGKDKYENEDLI++G PEDVWFHVD+LSSAHVYLRM  G  L ++ P  ++EC  LVKANSI+GCK K V VVYTRW+NL+K +    GQVG+     V +  VEK N IVNALN+TK E HP+L + Q++R +E + E+KA     XXXXXXXXXXXXXX    SY+ + ++  M SNA+  AT DA+A+  +E+DF 
Sbjct:    1 MVFYFSTRCGNFMLYMGKDKYENEDLIKFGQPEDVWFHVDDLSSAHVYLRMKPGMTLSDIPPDAILECAALVKANSIQGCKMKSVYVVYTRWKNLKKTSQMVDGQVGFHRPENVKRMEVEKHNPIVNALNKTKEERHPDLYKEQQDRLREIQEEKKANXXXXXXXXXXXXXXXXXXKERLSYNRIMKDDNMTSNAERTATADATAAEEYEEDFF 214
[Close]
BLAST of mRNA_E-fasciculatus_F_contig156.3889.1 vs. uniprot
Match: K0TEU7_THAOC (NFACT-R_1 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TEU7_THAOC)

HSP 1 Score: 194 bits (494), Expect = 5.630e-59
Identity = 109/214 (50.93%), Postives = 148/214 (69.16%), Query Frame = 1 
Query:   79 MVFYFTSSDG-HMLYMGKDKYENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNAIVNALNRTKREEHPNLAELQEERAKEHRREQKALRKKKXXXXXXXXXXXXXXXXLRSYDTLFEESKMASNADVAATEDASASIAFEDDFM 717
            MV+YFTS  G + +YMGKDK+ENE LI+YG PEDVWFHVD+LSSAHVYLR+  G+ L ++    L++CC+L KANSI+GCK+  V +VYTRW+NL+K +    GQVGY   + V + + EK N +V  L +TK+E  P+LA+ Q  R +E +  +KA  + +      XXXXXX     RSY+ +F + KM SNAD+ AT D SA++ +EDDFM
Sbjct:    1 MVYYFTSRCGAYTIYMGKDKHENETLIKYGLPEDVWFHVDDLSSAHVYLRLKPGQTLDDIPEEALIDCCSLCKANSIQGCKKSTVYIVYTRWKNLKKTSGMVDGQVGYHRPNNVRRRQTEKNNPVVRQLEKTKKELFPDLAQEQAARMREIQELKKAHMRAEAKAKKLXXXXXXRLKEERSYERIFSQDKMTSNADMNATVDDSAAVDYEDDFM 214
[Close]
BLAST of mRNA_E-fasciculatus_F_contig156.3889.1 vs. uniprot
Match: A0A2D4BG70_PYTIN (Coiled-coil domain-containing protein 25, variant 2 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BG70_PYTIN)

HSP 1 Score: 189 bits (480), Expect = 7.580e-57
Identity = 106/215 (49.30%), Postives = 139/215 (64.65%), Query Frame = 1 
Query:   79 MVFYFTSSDGHMLYMGKDKYENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEK-LKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNA-IVNALNRTKREEHPNLAELQEERAKEHRREQKALRKKKXXXXXXXXXXXXXXXXLRSYDTLFEESKMASNADVAATEDASASIAFEDDFM 717
            MVFYFTSS+GH +YMGKDK+ENEDLIRYGF ED+WFHVD+LSSAHVYLR+  G+  L ++    L EC  LVK NSIEGCK+K V V+YT+W+NL+K  S E GQVG+    RV    VE+ N  I+ ALN++K E +P+L E + +R   ++ E+K  R++                 LRSY TL     + S   V A+ D S+  A+E+DFM
Sbjct:    1 MVFYFTSSEGHTIYMGKDKFENEDLIRYGFLEDIWFHVDDLSSAHVYLRLPIGKSALDDISETCLEECAQLVKENSIEGCKKKSVKVIYTKWRNLKKTPSMEVGQVGFNHPERVRTYVVEEKNKDILKALNKSKVESYPDLEEERRQRELLYKAERKKQRQQIELQERKAREEFKKQKELRSYSTLLTRDNIESGEKVVASADLSSVNAYEEDFM 215
[Close]
BLAST of mRNA_E-fasciculatus_F_contig156.3889.1 vs. uniprot
Match: D0N3D3_PHYIT (NFACT-R_1 domain-containing protein n=29 Tax=Phytophthora TaxID=4783 RepID=D0N3D3_PHYIT)

HSP 1 Score: 189 bits (479), Expect = 1.070e-56
Identity = 106/215 (49.30%), Postives = 138/215 (64.19%), Query Frame = 1 
Query:   79 MVFYFTSSDGHMLYMGKDKYENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGE-KLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNA-IVNALNRTKREEHPNLAELQEERAKEHRREQKALRKKKXXXXXXXXXXXXXXXXLRSYDTLFEESKMASNADVAATEDASASIAFEDDFM 717
            MVFYFTSS+GH +YMGKDK+ENEDLIRYGF ED+WFHVD+LSSAHVYLR+  G+ K+ ++    L EC  LVK NSIEG K+K V+V YTRW+NL+K  S E GQVG+    RV   +VE+ N  I+ +LN+TK+E HP+L E   +R   ++ E+K  R +                 LRSY TL     + S   + A  D S+  A+E+DFM
Sbjct:    1 MVFYFTSSEGHTIYMGKDKFENEDLIRYGFMEDIWFHVDDLSSAHVYLRLPLGQTKVDDVSETCLEECAQLVKENSIEGSKKKSVSVCYTRWRNLKKTPSMEIGQVGFNHPERVRHYKVEEKNKDIIKSLNKTKQEFHPDLEEEHRQRELLYKAERKKQRLQLEAEQRKAKMEFKQQKDLRSYSTLMSRDNIESGDKLDAAADLSSVNAYEEDFM 215
[Close]
BLAST of mRNA_E-fasciculatus_F_contig156.3889.1 vs. uniprot
Match: A0A4D9D3G1_9STRA (NFACT-R_1 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3G1_9STRA)

HSP 1 Score: 184 bits (468), Expect = 1.120e-55
Identity = 109/168 (64.88%), Postives = 131/168 (77.98%), Query Frame = 1 
Query:  121 MGKDKYENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNAIVNALNRTKREEHPNLAELQEERAKEHRREQKALRKKKXXXXXXXXXXXXXXXXLRSYD 624
            MGKDKYENE+LIR+G PEDVWFHVD LSSAHVYLR   G+KL ++   LL+EC +LVKANSIEGCK KEV VVYTRW+NL+K  S EAGQ+G+ D S+V   +V+K N+IVNALN+TK E  P+L   QE RA E+R  QKA ++ + XXXXXXXXXXXX   LRSY+
Sbjct:    1 MGKDKYENEELIRFGLPEDVWFHVDELSSAHVYLRQKPGQKLDDISSDLLLECSSLVKANSIEGCKMKEVKVVYTRWRNLKKTKSMEAGQIGFHDPSKVRTIKVQKCNSIVNALNKTKEERFPDLQAEQEARAVEYRAAQKASKRDQEXXXXXXXXXXXXEAKLRSYE 168
[Close]
BLAST of mRNA_E-fasciculatus_F_contig156.3889.1 vs. uniprot
Match: K3WKA0_GLOUD (NFACT-R_1 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKA0_GLOUD)

HSP 1 Score: 186 bits (471), Expect = 1.730e-55
Identity = 106/215 (49.30%), Postives = 138/215 (64.19%), Query Frame = 1 
Query:   79 MVFYFTSSDGHMLYMGKDKYENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEK-LKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRV-EKTNAIVNALNRTKREEHPNLAELQEERAKEHRREQKALRKKKXXXXXXXXXXXXXXXXLRSYDTLFEESKMASNADVAATEDASASIAFEDDFM 717
            MVFY TSS+GH +YMGKDK+ENEDLIRYGF ED+WFHVD+LSSAHVYLR+  G+  L ++    L EC  LVK NSIEG K+K VNVVYT+W+NL+K  S E GQVG+    RV    V EK   I+ ALN+TK E++P+L E + ++   ++ E+K  R++                 LRSY TL    K+ S   V A+ D S+   +E+DFM
Sbjct:    1 MVFYLTSSEGHTIYMGKDKFENEDLIRYGFLEDIWFHVDDLSSAHVYLRLPMGKSALDDISETCLEECAQLVKENSIEGSKKKSVNVVYTKWRNLKKTQSMEVGQVGFNHPERVRTYAVAEKNRDILKALNKTKLEKYPDLEEERRKQELLYKVERKKQRQQVEFAEKKAREEYKQQKELRSYSTLMSRDKIESANKVVASADLSSVNEYEEDFM 215
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig156.3889.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6E1_ECTSI4.320e-134100.00NFACT-R_1 domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KW36_9PHAE1.460e-9198.78NFACT-R_1 domain-containing protein n=1 Tax=Ectoca... [more]
A0A835Z4I1_9STRA8.600e-9165.74NFACT-R_1 domain-containing protein n=1 Tax=Tribon... [more]
B8C9M3_THAPS3.780e-6150.68NFACT-R_1 domain-containing protein n=1 Tax=Thalas... [more]
A0A6U6DJ37_9STRA3.470e-6057.01Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
K0TEU7_THAOC5.630e-5950.93NFACT-R_1 domain-containing protein n=1 Tax=Thalas... [more]
A0A2D4BG70_PYTIN7.580e-5749.30Coiled-coil domain-containing protein 25, variant ... [more]
D0N3D3_PHYIT1.070e-5649.30NFACT-R_1 domain-containing protein n=29 Tax=Phyto... [more]
A0A4D9D3G1_9STRA1.120e-5564.88NFACT-R_1 domain-containing protein n=1 Tax=Nannoc... [more]
K3WKA0_GLOUD1.730e-5549.30NFACT-R_1 domain-containing protein n=1 Tax=Globis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig156contigE-fasciculatus_F_contig156:1818..5168 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score389.4
Seed ortholog evalue1.2e-105
Seed eggNOG ortholog2880.D7G6E1
Preferred nameCCDC25
KEGG koko:K04989
KEGG TC1.A.5.1.2
KEGG Pathwayko04742,map04742
GOsGO:0001581,GO:0003008,GO:0003674,GO:0005215,GO:0005216,GO:0005261,GO:0005262,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0007600,GO:0007606,GO:0008150,GO:0008324,GO:0009268,GO:0009581,GO:0009582,GO:0009593,GO:0009605,GO:0009612,GO:0009628,GO:0009987,GO:0010447,GO:0015075,GO:0015085,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0022803,GO:0022838,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0032501,GO:0032991,GO:0034220,GO:0034702,GO:0034703,GO:0042221,GO:0043235,GO:0044424,GO:0044425,GO:0044464,GO:0046873,GO:0050877,GO:0050896,GO:0050906,GO:0050907,GO:0050909,GO:0050912,GO:0050915,GO:0050982,GO:0051179,GO:0051234,GO:0051606,GO:0051716,GO:0055085,GO:0070588,GO:0070838,GO:0071214,GO:0071467,GO:0071468,GO:0071944,GO:0072511,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0104004,GO:1902495,GO:1990351
EggNOG free text desc.Domain of unknown function (DUF814)
EggNOG OGsKOG3272@1,KOG3272@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04040
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDomain of unknown function DUF814
Ec32 orthologEc-10_001520.1
Exons7
Model size727
Cds size726
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928032.1836464-CDS-E-fasciculatus_F_contig156:1817..19201622928032.1836464-CDS-E-fasciculatus_F_contig156:1817..1920Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig156 1818..1920 +
1695995796.2126014-CDS-E-fasciculatus_F_contig156:1817..19201695995796.2126014-CDS-E-fasciculatus_F_contig156:1817..1920Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig156 1818..1920 +
1622928032.1978004-CDS-E-fasciculatus_F_contig156:2720..28601622928032.1978004-CDS-E-fasciculatus_F_contig156:2720..2860Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig156 2721..2860 +
1695995796.2269192-CDS-E-fasciculatus_F_contig156:2720..28601695995796.2269192-CDS-E-fasciculatus_F_contig156:2720..2860Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig156 2721..2860 +
1622928032.2113032-CDS-E-fasciculatus_F_contig156:3125..31761622928032.2113032-CDS-E-fasciculatus_F_contig156:3125..3176Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig156 3126..3176 +
1695995796.2358897-CDS-E-fasciculatus_F_contig156:3125..31761695995796.2358897-CDS-E-fasciculatus_F_contig156:3125..3176Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig156 3126..3176 +
1622928032.2239516-CDS-E-fasciculatus_F_contig156:3459..35551622928032.2239516-CDS-E-fasciculatus_F_contig156:3459..3555Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig156 3460..3555 +
1695995796.2468991-CDS-E-fasciculatus_F_contig156:3459..35551695995796.2468991-CDS-E-fasciculatus_F_contig156:3459..3555Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig156 3460..3555 +
1622928032.235957-CDS-E-fasciculatus_F_contig156:4037..41801622928032.235957-CDS-E-fasciculatus_F_contig156:4037..4180Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig156 4038..4180 +
1695995796.2574172-CDS-E-fasciculatus_F_contig156:4037..41801695995796.2574172-CDS-E-fasciculatus_F_contig156:4037..4180Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig156 4038..4180 +
1622928032.2495842-CDS-E-fasciculatus_F_contig156:4575..46361622928032.2495842-CDS-E-fasciculatus_F_contig156:4575..4636Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig156 4576..4636 +
1695995796.2676625-CDS-E-fasciculatus_F_contig156:4575..46361695995796.2676625-CDS-E-fasciculatus_F_contig156:4575..4636Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig156 4576..4636 +
1622928032.2662117-CDS-E-fasciculatus_F_contig156:5036..51681622928032.2662117-CDS-E-fasciculatus_F_contig156:5036..5168Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig156 5037..5168 +
1695995796.27734-CDS-E-fasciculatus_F_contig156:5036..51681695995796.27734-CDS-E-fasciculatus_F_contig156:5036..5168Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig156 5037..5168 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig156.3889.1prot_E-fasciculatus_F_contig156.3889.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig156 1818..5168 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig156.3889.1

>prot_E-fasciculatus_F_contig156.3889.1 ID=prot_E-fasciculatus_F_contig156.3889.1|Name=mRNA_E-fasciculatus_F_contig156.3889.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=242bp
TPPLLTPQPPTRLSALVLAPTTHVNKMVFYFTSSDGHMLYMGKDKYENED
LIRYGFPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKAN
SIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNAI
VNALNRTKREEHPNLAELQEERAKEHRREQKALRKKKELEEKNARKQKEE
EKRLRSYDTLFEESKMASNADVAATEDASASIAFEDDFMVR*
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mRNA from alignment at E-fasciculatus_F_contig156:1818..5168+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig156.3889.1 ID=mRNA_E-fasciculatus_F_contig156.3889.1|Name=mRNA_E-fasciculatus_F_contig156.3889.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3351bp|location=Sequence derived from alignment at E-fasciculatus_F_contig156:1818..5168+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ACTCCTCCGCTGCTCACGCCTCAACCACCTACTCGCCTCTCTGCACTCGT
ACTTGCCCCGACCACACACGTCAACAAGATGGTCTTCTACTTTACGTCTA
GTGGTGAGAGGGGTCAGGGACAGCAGTCAGTAATTGCATTGAGCTGTTTT
CTCCGGTAAGGCCGCAACACACCGCATGCTCACCTATGCGTGTATGTATG
CACAGTTGCCAGGCTAGGGTCTGTCTCGGCATAAGTACAACATCCAAATC
ATGGCATTCTGTCCTTTGATCGGTTTCAAGCATGTGCTGATACAACTGAT
ACATCGGAGTTACTACAGCAGTATTAGACTACGCCCTGATCTTGTTGCCT
AAAAGGCGCCGAGAGCTACATGTACAGCTGCTATTACAGCACATTCCCAC
AGGTGCCGCAGGTATCCGGACTCTTGTGGATGCCAGCAGATTTTTCCAGC
CTGTAGGACAGGTCATTAACTGACTACATATCCGTTTCGTCGCGTAGGAT
GCCCCACATACCAATAGGGTGGCTGTATCGGCCTACTAAATACTGACGGA
ATTCTCGTACGTCTGCTCGCTGCCGGTCGCCCGTTCGAAGAAGAAGGCCC
ACCACGGGCCGTCGTGCTACCGTTCACTCTACTGGCAAAGATGTTATTCC
TTGTTTCGAACGCGGCCCAGGATCAATTCATACCACCAGCCGCGAGAAAT
GGTTGACATCTTGATGATGTTCTTGGTAGTCGATGCCGCAGAGCTTCGTT
TCGAATTTACACGACCTGCACGCTAAACCCCCTTTCATTTCCCACGGTAT
ATATCGATGATACTGTTCGGAGTGATTCTGGATTGTCAGTCCTAAATTTC
CAATTTCCCTAATGCTTCAGAGTTGTCCGTCGTTCTTCTCCTACATCTCC
CAGACGGGCACATGCTGTACATGGGCAAAGACAAGTACGAGAACGAGGAC
TTGATCCGGTACGGTTTCCCAGAAGACGTCTGGTTTCACGTCGACAACTT
GAGCTCCGCCCACGTCTACCTCCGAATGAACCGGGGAGAGAAGGTTAGGA
TGGTAAAAGGGGGGTGCGCCAATGGCCTGTGACGAGCGATCGCGAGTAGC
ACAAGGATCAGAGGCGGATATGTCGGGAGAACGGAATTTTTCGGCGTGGG
ACAGATCAGCCTGGTGCCTTCCGTGTGTAGTCTTGGCCAACATGTGTGAT
GGACCAGAGTGATGGACCTTGCGTAGATTTGAGTTGCTGTTGCGAGAGAG
GGGTGACACACTTCCTTCCTTCTTCCCTTTTTCTTTTTCGTCTGCGTTCT
TTGTGCAGCTAAAAGAGCTCGATCCGGCGCTGCTTGTAGAATGCTGCACA
CTCGTCAAGGTAAGCGAGTGCACTTGTATCGCGGGGCGTGCATGGGTACA
TGTTCCTACACATAAATCGCTCCCAACCAACCTTTTTTGTGTCGTGCGGA
GAGCCATATGCATGCCTCCTCTTATTACTGCTCTGATCTGCTGCGAATGC
GATGGTATCAGGCTCTGTTACATCCTATCCAGGTATTTTGACTTGGGTCC
CCGCCTGTTGGGTCAGCAATTAGTTGTTCGGATCGGTTACCAAGTGCTTC
TTAAACTAACATCGAAGACGGCGATCGCGTGCTGTTCTTCAGGCAAATTC
GATCGAAGGTTGCAAGCGGAAGGAAGTCAACGTTGTCTACACTCGGTGGC
AAAACCTTGAGAAAAAGGCTAGCTATGAGGCGGGACAGGTGCGTAAACCA
GCACTTGCTTTCGACATGGAACTGTGTTGTCACTCGGTACGAGCGACGAA
CATGCGGGTGAACAGGACCAATAAGATTTTGCCAAAGGGTCTGCAAGAGA
TGCGGGGCGCGGGAATGAACACGTAACAGAAATCTATTGAAGGCGTGTTG
CTTCACGTACGCTCGATCCTTGATTTGTTCAGCTGTGGTTTTCGTGGGTG
GGATCGTGGGTGGGAAGTACCAACCTGTCCTGTCGGCGGATGCAGTAAAG
CTCTCGAAGGTAGAATACCGTAAGAAACAATATCGAAACGACCCAAACGT
TCTCGTGCTGTGTGTGACCCAACCAGCGAACTCCATTCATCCGCATCAGC
ACGAACGCTCATTTGACTGGACTTAAGAGGGATGTGAGGTAAATCAGGCA
GGCCCTTTCTCTTTGGTACGAAGTATTTCTTACACTATGCTCTTGATGCC
TGTCTTTTGGCGGCGCTCAGGTGGGCTACAAGGACGAGAGCAGGGTGTTC
AAGTGTCGGGTGGAGAAGACCAACGCTATCGTTAACGCTCTGAACCGCAC
CAAACGCGAGGAGCATCCGAATCTCGCCGAGTTGCAGGAGGAACGGGCGA
AGGAACACCGGAGGTACGAATTGTGGAGGCCATCTACGCACCAGTGACAT
TCCTCAAGAGTTGGCCGAAAGCAGCTCATGTGCAGGCTGGGAACGAGGGA
GAGATCATGTGGAAGCCACCAACCTTGTTTAATTGGATGAAGGCTAGCGT
GGTGTATAATGGTGGAATGTGGGTTGTACCTAGCCCTGACGTGGCGGATG
GACATAGGCACAGGGACAAGGAGGCGGGGGCTCTTAAGGTCAGCGCCGAA
GTACGCAGTTTTAAACGGCATCCGATTTTTGTTATGTTATACCCGATGAC
GCGCGTGTCAATGACGCTGTATCGATCCTCCGAATTTGACCATCTTTTTT
GGACGCGTGCGGCCGTGCACCTGCCCGGCCTTTCTCTCGTGGCGAAAACT
TTCGACAGAGAGCAAAAGGCCTTGAGAAAGAAGAAAGAACTCGAAGAGAA
GAACGCTCGGAAGCAGAAGGTAAGTCGATCATATTCGACGAGTCCATTTT
GTAGTATTCTTACTCACTTAGTGCCGGGGGCCTCGCTCCTGTTCCTGTTG
TATGCTGACATGTTGCTCTCTGGTCAATGCCAAAGAACGAGAACATGCTT
GAGGCACAGCATAGAAGGCAGCGTAGGTTATCTAAAATGAGCGATTGCTG
GACGACACCATTGACAGTTGGCGCCGCTTGACTGCCTTTCCGCCACCTTG
TAACAGATTGTTCAAATTTCCCGTATCTCCTCTTACCCTTCGCCCTTGCC
TTATTCCGTATGTACTGTGCGCCGTATCCCGTGCGCGCGCTGTCCCGTCA
TATTCCACGGCTCGGGTGGCGAACGAACCGTGTTCACAATACATTATGCC
CGTTGTGAAATAATGGCAGGAAGAAGAGAAACGACTGCGATCATACGACA
CGTTGTTTGAGGAGTCTAAGATGGCGTCCAACGCCGATGTTGCTGCCACA
GAAGACGCGTCCGCTTCAATCGCGTTCGAGGATGACTTCATGGTGAGATA
G
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig156:1818..5168+

>mRNA_E-fasciculatus_F_contig156.3889.1 ID=mRNA_E-fasciculatus_F_contig156.3889.1|Name=mRNA_E-fasciculatus_F_contig156.3889.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1452bp|location=Sequence derived from alignment at E-fasciculatus_F_contig156:1818..5168+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ACTCCTCCGCTGCTCACGCCTCAACCACCTACTCGCCTCTCTGCACTCGT
ACTTGCCCCGACCACACACGTCAACAAGATGGTCTTCTACTTTACGTCTA
GTGACTCCTCCGCTGCTCACGCCTCAACCACCTACTCGCCTCTCTGCACT
CGTACTTGCCCCGACCACACACGTCAACAAGATGGTCTTCTACTTTACGT
CTAGTGACGGGCACATGCTGTACATGGGCAAAGACAAGTACGAGAACGAG
GACTTGATCCGGTACGGTTTCCCAGAAGACGTCTGGTTTCACGTCGACAA
CTTGAGCTCCGCCCACGTCTACCTCCGAATGAACCGGGGAGAGAAGACGG
GCACATGCTGTACATGGGCAAAGACAAGTACGAGAACGAGGACTTGATCC
GGTACGGTTTCCCAGAAGACGTCTGGTTTCACGTCGACAACTTGAGCTCC
GCCCACGTCTACCTCCGAATGAACCGGGGAGAGAAGCTAAAAGAGCTCGA
TCCGGCGCTGCTTGTAGAATGCTGCACACTCGTCAAGCTAAAAGAGCTCG
ATCCGGCGCTGCTTGTAGAATGCTGCACACTCGTCAAGGCAAATTCGATC
GAAGGTTGCAAGCGGAAGGAAGTCAACGTTGTCTACACTCGGTGGCAAAA
CCTTGAGAAAAAGGCTAGCTATGAGGCGGGACAGGCAAATTCGATCGAAG
GTTGCAAGCGGAAGGAAGTCAACGTTGTCTACACTCGGTGGCAAAACCTT
GAGAAAAAGGCTAGCTATGAGGCGGGACAGGTGGGCTACAAGGACGAGAG
CAGGGTGTTCAAGTGTCGGGTGGAGAAGACCAACGCTATCGTTAACGCTC
TGAACCGCACCAAACGCGAGGAGCATCCGAATCTCGCCGAGTTGCAGGAG
GAACGGGCGAAGGAACACCGGAGGTGGGCTACAAGGACGAGAGCAGGGTG
TTCAAGTGTCGGGTGGAGAAGACCAACGCTATCGTTAACGCTCTGAACCG
CACCAAACGCGAGGAGCATCCGAATCTCGCCGAGTTGCAGGAGGAACGGG
CGAAGGAACACCGGAGAGAGCAAAAGGCCTTGAGAAAGAAGAAAGAACTC
GAAGAGAAGAACGCTCGGAAGCAGAAGAGAGCAAAAGGCCTTGAGAAAGA
AGAAAGAACTCGAAGAGAAGAACGCTCGGAAGCAGAAGGAAGAAGAGAAA
CGACTGCGATCATACGACACGTTGTTTGAGGAGTCTAAGATGGCGTCCAA
CGCCGATGTTGCTGCCACAGAAGACGCGTCCGCTTCAATCGCGTTCGAGG
ATGACTTCATGGTGAGATAGGAAGAAGAGAAACGACTGCGATCATACGAC
ACGTTGTTTGAGGAGTCTAAGATGGCGTCCAACGCCGATGTTGCTGCCAC
AGAAGACGCGTCCGCTTCAATCGCGTTCGAGGATGACTTCATGGTGAGAT
AG
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