mRNA_E-fasciculatus_F_contig15559.3870.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15559.3870.1 vs. uniprot
Match: A0A6H5KG13_9PHAE (Sulfatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KG13_9PHAE) HSP 1 Score: 555 bits (1429), Expect = 1.170e-193 Identity = 272/291 (93.47%), Postives = 279/291 (95.88%), Query Frame = 1
Query: 1 MSPVPWRAASAPLLALLSIGRVSQALGVGSSATTTENPNVLVVVVDDLGWKDVGFHDTTFSTPNLDAMVAEGVELSTFYTAPTCTPSRAQLMTGRYSYRMGMQDSVLHTTEPRGVPLTETFVGEKLQAAGYSTAAVGKWHLGMHMPQFLPVERGFDDFYGILTGGGGHYAHMSVSQEFTPRGGAGKPRTFSGPNIVEGSEVSDDNQDTRTHSTELYTKKAAEYVEEMSGKEGQPWFLYLSYQAIHDPIETDDSWINGRSCESISAENSSVGETDETDYDNRRVACGMVAQV 873
MSPVPWRAASAPLLALL IGR QA+G GSSATT ENPNVLVVVVDDLGWKDVGFHDTTFSTPNLDAMVAEGVEL+TFYTAPTCTPSRAQLMTGRYSYR+GMQDSVLHT EPRGVPLTETFVGEKLQAAGYSTAAVGKWHLGMHMPQFLPVERGFDDFYGILTGGGGHY HMSVS EFTPRGG+GK RTFSGPNIVEGSEVSDDNQDTRTHSTELYTKKAAEYVE MS KEGQPWFLYLSYQAIHDPIETDDSWING SCESISAENSS+GETDETDYDNRR+ACGMVAQ+
Sbjct: 1 MSPVPWRAASAPLLALLGIGRAPQAMGSGSSATT-ENPNVLVVVVDDLGWKDVGFHDTTFSTPNLDAMVAEGVELATFYTAPTCTPSRAQLMTGRYSYRIGMQDSVLHTMEPRGVPLTETFVGEKLQAAGYSTAAVGKWHLGMHMPQFLPVERGFDDFYGILTGGGGHYTHMSVSPEFTPRGGSGKTRTFSGPNIVEGSEVSDDNQDTRTHSTELYTKKAAEYVEAMSAKEGQPWFLYLSYQAIHDPIETDDSWINGTSCESISAENSSIGETDETDYDNRRIACGMVAQM 290
BLAST of mRNA_E-fasciculatus_F_contig15559.3870.1 vs. uniprot
Match: A0A835ZF60_9STRA (Formylglycine-dependent sulfatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF60_9STRA) HSP 1 Score: 328 bits (841), Expect = 2.470e-105 Identity = 160/262 (61.07%), Postives = 197/262 (75.19%), Query Frame = 1
Query: 88 SSATTTENPNVLVVVVDDLGWKDVGFHDTTFSTPNLDAMVAEGVELSTFYTAPTCTPSRAQLMTGRYSYRMGMQDSVLHTTEPRGVPLTETFVGEKLQAAGYSTAAVGKWHLGMHMPQFLPVERGFDDFYGILTGGGGHYAHMSVSQEFTPRGGAGKPRTFSGPNIVEGSEVSDDNQDTRTHSTELYTKKAAEYVEEMSGKEGQPWFLYLSYQAIHDPIETDDSWINGRSCESISAENSSVGETDETDYDNRRVACGMVAQV 873
++A+ PN+LVVVVDDLGW DVGF+D TFSTPN++A+ AEGV L FY +PTCTP+RAQLMTGRY+Y+ GMQDSV+H+TEPRGVPL + F+ +KLQ AGY+TAAVGKWHLGMH Q+ P+ RGFD YGILTGGGGH AH SVSQ FT R RTF G NI E VS DN T THS+ELY+ KA +Y++E+ G + PWF+YL+YQA+HDP+ETD +W G SC +IS + G + D+DNR V CGM AQ+
Sbjct: 6 AAASADGKPNILVVVVDDLGWSDVGFNDPTFSTPNINALAAEGVNLDAFYVSPTCTPTRAQLMTGRYNYKTGMQDSVVHSTEPRGVPLNQQFLSQKLQRAGYATAAVGKWHLGMHQEQYTPLRRGFDRHYGILTGGGGHTAHRSVSQSFTTRQ-TNVSRTFDGYNIWEDGAVSADNYGT-THSSELYSGKALQYLQEL-GAQDAPWFVYLAYQAVHDPVETDAAWYTGNSCANISDTGDAAGA--DIDWDNRPVLCGMAAQI 262
BLAST of mRNA_E-fasciculatus_F_contig15559.3870.1 vs. uniprot
Match: A0A7S2BCJ8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BCJ8_9STRA) HSP 1 Score: 278 bits (712), Expect = 1.150e-85 Identity = 142/271 (52.40%), Postives = 186/271 (68.63%), Query Frame = 1
Query: 73 ALGVGSSATTTENPNVLVVVVDDLGWKDVGFHDTTFSTPNLDAMVAEGVELSTFYTAPTCTPSRAQLMTGRYSYRMGMQDSVLHTTEPRGVPLTETFVGEKLQAAGYSTAAVGKWHLGMHMPQFLPVERGFDDFYGILTGGGGHYAHMSVSQEFTPRGGAGKPRTFSGPNIVEGSEVSDDNQDTRTHSTELYTKKAAEYVEEMSGKEGQ-PWFLYLSYQAIHDPIET-DDSWINGRSCESISAENSSVGETDET--DYDNRRVACGMVAQV 873
AL SA PN++ V++DDLGW DVG+HD F+TP + ++ GV L FYTAPTCTPSR+Q MTGRY+ R GMQDSVLH+TEPRGVPL E F+ KLQ +GY T A+GKWH+GMH +LP+ RGFD YGI TGGG H H SVSQ FT R A + + G NI E S+DN +THST LY+ KAAE+V+ ++ P+F+YL+YQA+HDPIE D+ +++ +C SI+ S G D++ D+DNR++ CGMVA++
Sbjct: 29 ALASKKSAEAQTQPNIVTVMIDDLGWNDVGWHDEKFATPAMSSLAETGVVLERFYTAPTCTPSRSQFMTGRYNIRNGMQDSVLHSTEPRGVPLNEEFLSTKLQTSGYRTVAIGKWHMGMHQSSYLPLSRGFDRHYGIYTGGGSHTGHFSVSQSFTVRHQA-DAQIWQGYNIWEDGVPSEDNYG-KTHSTHLYSGKAAEFVDLFETEDDDTPFFMYLAYQAVHDPIEVGDEKYVSETTCSSIT---SPPGNKDDSGIDWDNRQILCGMVAEI 294
BLAST of mRNA_E-fasciculatus_F_contig15559.3870.1 vs. uniprot
Match: A0A7S2S7R6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7R6_9STRA) HSP 1 Score: 253 bits (647), Expect = 3.730e-76 Identity = 136/283 (48.06%), Postives = 181/283 (63.96%), Query Frame = 1
Query: 34 PLLALLSIGRVSQALGVGSSATTTENPNVLVVVVDDLGWKDVGFHDTTFSTPNLDAMVAE--GVELSTFYTAPTCTPSRAQLMTGRYSYRMGMQDSVLHTTEPRGVPLTETFVGEKLQAAGYSTAAVGKWHLGMHMPQFLPVERGFDDFYGILTGGGGHYAHMSVSQEFTPRGGAGKPRTFSGPNIVEGSEVSDDNQDTRTHSTELYTKKAAEYVEEMSGKEGQPWFLYLSYQAIHDPIET-DDSWINGRSCESISAENSSVGETDETDYDNRRVACGMVAQV 873
PL +L SSA+ T PNV++V+VDD G+ D+ ++D + TPNL+++ + G+ L FYT TCTPSRA LMTGRY R G QDSV+H+TEPRG+PLTE + +KL GYST AVGKWHLGM PQ+LP RGFD FYGI TGGG H H+SVSQ FTPR G+P ++G N+ + E S+DN + H+T LYT +A +EE +G + P+FLYL++QA+HDPI+ DD+ + C SI D D R++ CGM+ +V
Sbjct: 13 PLALVLCAAAALPRAAADSSASVTP-PNVVMVLVDDQGFGDISWNDDSMYTPNLESIASTEGGIVLDYFYTGATCTPSRAMLMTGRYPIRYGFQDSVIHSTEPRGLPLTEKLLPQKLGELGYSTMAVGKWHLGMFTPQYLPQNRGFDSFYGIYTGGGDHLLHVSVSQTFTPRDSTGEPIQWTGSNLWDDGEPSEDNI-SGEHTTTLYTNRAVTLIEEAAGADN-PFFLYLAFQAVHDPIQVADDASMTSTPCASI-------------DDDARQLLCGMMVEV 279
BLAST of mRNA_E-fasciculatus_F_contig15559.3870.1 vs. uniprot
Match: A0A8J2SGH0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SGH0_9STRA) HSP 1 Score: 246 bits (628), Expect = 9.740e-74 Identity = 139/308 (45.13%), Postives = 176/308 (57.14%), Query Frame = 1
Query: 1 MSPVPWRAASAPLLALLSIGRVSQALGVGSSATTTENPNVLVVVVDDLGWKDVGFHDTTFSTPNLDAMVAEGVELSTFYTAPTCTPSRAQLMTGRYSYRMGMQDSVLHTTEPRGVPLTETFVGEKLQAAGYSTAAVGKWHLGMHMPQFLPVERGFDDFYGILTGGGGHYAHMSVSQEFTPRGGAGKPRTFSGPNIVEGSEVSDDNQDTRTHSTELYTKKAAEYVEEMSGKEG----------------QPWFLYLSYQAIHDPIETDDS-WINGRSCESISAENSSVGETDETDYDNRRVACGMVAQV 873
M P+P R A L +L A + PN+L+ +VDDLG DV ++D TP L ++ +GV L FY A TCTP+RA LMTGR R GMQDSV+H TEPRGVPL E F+GEKLQ+AGY TA VGKWHLG H + P++RGF+ +YGI GGG H H SVSQ FT RGG T+SG N+ + S DN+ + TH+T LYT KA EY+E PWFLYLSYQA+HDP+E D+ ++ +C+S+ A S + CGMVA+V
Sbjct: 1 MGPMPGRRRLAALALVLG-------------AQANKRPNLLLALVDDLGSGDVQYNDPAMVTPELSSLAEDGVILDRFYAAATCTPARAALMTGRLGIRTGMQDSVIHATEPRGVPLDEVFLGEKLQSAGYRTAMVGKWHLGFHEAAYTPLKRGFEKWYGIFPGGGSHTGHFSVSQPFTARGGTDV--TWSGFNLWDNDAPSADNK-SPTHTTHLYTAKAKEYIETFEAAAPAYAAPPRKTPRKLSIRDPWFLYLSYQAVHDPVEVGDAKYVTDTNCKSLDAPRSEL--------------CGMVAEV 278
BLAST of mRNA_E-fasciculatus_F_contig15559.3870.1 vs. uniprot
Match: A0A7S2FKR7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FKR7_9STRA) HSP 1 Score: 228 bits (581), Expect = 2.180e-66 Identity = 121/273 (44.32%), Postives = 174/273 (63.74%), Query Frame = 1
Query: 76 LGVGSSATTTENPNVLVVVVDDLGWKDVGFHDTTFS--TPNLDAMVAEGVELSTFYTAPTCTPSRAQLMTGRYSYRMGMQDSVLHTTEPRGVPLTETFVGEKLQAAGYSTAAVGKWHLGMHMPQFLPVERGFDDFYGILTGGGGHYAHMSVSQEFTPRGGAGKPRTF--SGPNIVEGSEVSDDNQDTRTHSTELYTKKAAEYVEEMSGKEGQPWFLYLSYQAIHDPIETDDSWING---RSCESISAENSSVGETDETDYDNRRVACGMVAQV 873
+GV S+ T+ PN+L++ VDDLG+ D+G+++ F+ T ++ + G+ L FYT+PTCT SRA L+TGR+ R+G+QDSV+H+TEPRGVPLTE + E+L+ GY T A+GKWHLG H Q+LP +RGFD+F+GILTGGG H+AH S F RG K F +G N+ E D++ HST++YT+KA E+++E QPWF+YL+YQA+H P++ +++ +G C + S D RR CGMV+ V
Sbjct: 6 IGVESARNVTK-PNILILYVDDLGYGDIGYNNVEFAKATRTINRLSNSGIILDQFYTSPTCTASRASLLTGRFPARLGLQDSVIHSTEPRGVPLTEVLLPERLRETGYKTIALGKWHLGFHQTQYLPQKRGFDEFFGILTGGGDHFAHTSTGS-FVLRGPEYKTTKFLFTGSNMWHNDEHMLDSEIDGFHSTDIYTQKAMEFLKENEDS-AQPWFMYLAYQAVHAPMQAVNAFTDGTVQNGCHELKFRTS-----DRQFATMRRKLCGMVSMV 270
BLAST of mRNA_E-fasciculatus_F_contig15559.3870.1 vs. uniprot
Match: F0Y044_AURAN (Sulfatase domain-containing protein (Fragment) n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y044_AURAN) HSP 1 Score: 202 bits (513), Expect = 5.800e-61 Identity = 108/227 (47.58%), Postives = 147/227 (64.76%), Query Frame = 1
Query: 106 ENPNVLVVVVDDLGWKDVGFH---DTTFSTPNLDAMVAEGVELSTFYTAPTCTPSRAQLMTGRYSYRMGMQDSVLHTTEPRGVPLTETFVGEKLQAAGYSTAAVGKWHLGMHMPQFLPVERGFDDFYGILTGGGGHYAHMSVSQEFTPRGGAGKPRTF--SGPNIVE-----GSEVSDDNQDTRTHSTELYTKKAAEYVE-EMSGKEGQPWFLYLSYQAIHDPIETD 753
E P++++ VVDDLGW DVG+ D +TP LDA+ AEGV Y A CTPSRA L+TGR++ +G+QDSV+H TEPRG+ LT + +KL A GY T+AVGKWHLG H P++LP RGFD F+GILTGGG H+AH S ++ F+ RG T +G N+ E G++ H+T LY ++A + V+ + S K+ P FLYL+YQA+H P++ D
Sbjct: 4 ERPHIVLAVVDDLGWSDVGYQGSGDLGGATPQLDALAAEGVAFEALYGAAECTPSRAMLLTGRHAVALGLQDSVIHGTEPRGLDLTVATLADKLGARGYGTSAVGKWHLGFHTPKYLPRRRGFDSFFGILTGGGDHFAH-STTESFSVRGNLTSSTTHGATGRNLWEDDGPLGADAFAGYDGV--HTTALYAERALKIVDAKFSSKD--PHFLYLAYQAVHGPVQAD 225
BLAST of mRNA_E-fasciculatus_F_contig15559.3870.1 vs. uniprot
Match: A0A7S3JYK8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JYK8_9STRA) HSP 1 Score: 206 bits (524), Expect = 1.550e-58 Identity = 109/254 (42.91%), Postives = 151/254 (59.45%), Query Frame = 1
Query: 118 VLVVVVDDLGWKDVGFHDT-TFSTPNLDAMVAEGVELSTFYTAPTCTPSRAQLMTGRYSYRMGMQDSVLHTTEPRGVPLTETFVGEKLQAAGYSTAAVGKWHLGMHMPQFLPVERGFDDFYGILTGGGGHYAHMSVSQEFTPRGGAGKPRTFSGPNIVEGSEVSDDNQDTRTHSTELYTKKAAEYVEEMSGKEGQPWFLYLSYQAIHDPIETDD-SWINGRSCESISAENSSVGETDETDYDNRRVACGMVAQV 873
V++ V+DDLG+ DVGF TP+L+AM EG+ + Y CTPSRA L+TGR++ +G+QDSV+H TEPRG+ T + + ++ YSTAA+GKWHLG + P+FLP RGFD F+GIL GGG HY+H ++ F RG A K +G N+ E D D H+TELYT K+ ++ + + +FLYLSYQA+H PI+T S+ RS G+ DE ++ R CGMV +
Sbjct: 25 VVLAVIDDLGYNDVGFQGNGEIRTPHLNAMAREGLVFESMYGGTECTPSRAMLLTGRHAVALGLQDSVIHGTEPRGMDETVETLADAFRSIAYSTAAIGKWHLGFYAPRFLPCRRGFDYFFGILVGGGDHYSH-ETTESFIARGNASKTIAVTGRNLWENDHPYDQGDDEGIHTTELYTAKSLALLKNYNEQNQNDFFLYLSYQAVHGPIQTPSVSYAPARSA----CHGPFSGDDDEVNWALRPRLCGMVTGI 273
BLAST of mRNA_E-fasciculatus_F_contig15559.3870.1 vs. uniprot
Match: F0YAS5_AURAN (Uncharacterized protein ARS2 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAS5_AURAN) HSP 1 Score: 203 bits (517), Expect = 1.990e-57 Identity = 114/262 (43.51%), Postives = 140/262 (53.44%), Query Frame = 1
Query: 88 SSATTTENPNVLVVVVDDLGWKDVGFHDTTFSTPNLDAMVAEGVELSTFYTAPTCTPSRAQLMTGRYSYRMGMQDSVLHTTEPRGVPLTETFVGEKLQAAGYSTAAVGKWHLGMHMPQFLPVERGFDDFYGILTGGGGHYAHMSVSQEFTPRGGAGKPRTFSGPNIVEGSEVSDDNQDTRTHSTELYTKKAAEYVEEMSGKEGQPWFLYLSYQAIHDPIETDDSWINGRSCESISAENSSVGETDETDYDNRRVACGMVAQV 873
S++ PN+L+ VVDD G DV ++D TP L M G L FY APTCTPSRA LMTGRY+ R GMQDSV+H+TEPRGVPL E F+ +KL AGY TAA+GKWHLGMH + P++RGFD FYGILTGGG H H S + + G+ + + AA SGK PWF+YLSYQA+HDP+ D V ET NR CGM+A++
Sbjct: 36 STSADAPRPNMLLTVVDDWGSGDVSYNDAALHTPELQRMSEHGFVLDNFYAAPTCTPSRAMLMTGRYNIRNGMQDSVIHSTEPRGVPLDERFLSQKLSDAGYRTAAIGKWHLGMHRDAYTPLKRGFDLFYGILTGGGSHTGHFSKGDD---KXXXXXXXXXXXXXXXGGA----------------HRRLAA------SGK--APWFVYLSYQAVHDPVTVGDDRY--------------VSETAAISTTNRPTLCGMIAEI 256
BLAST of mRNA_E-fasciculatus_F_contig15559.3870.1 vs. uniprot
Match: A0A7S3JYB2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JYB2_9STRA) HSP 1 Score: 202 bits (514), Expect = 9.260e-57 Identity = 111/260 (42.69%), Postives = 149/260 (57.31%), Query Frame = 1
Query: 112 PNVLVVVVDDLGWKDVGFHDT---TFSTPNLDAMVAEGVELSTFYTAPTCTPSRAQLMTGRYSYRMGMQDSVLHTTEPRGVPLTETFVGEKL-QAAGYSTAAVGKWHLGMHMPQFLPVERGFDDFYGILTGGGGHYAHMSVSQEFTPRGGAGKPRT--FSGPNIVEGSEVSDDNQDTRTHSTELYTKKAAEYVEEMSGKEGQPWFLYLSYQAIHDPIETDDSWINGRSCESISAENSSVGETDETDYDNRRVACGMVAQV 873
PN+++++VDD+GW DVG++ T STP +D + EG++ FYT+PTCT SRA LMTG+Y +G+QDSV+H +EPRGVPL E F+ EKL + AGY T +GKWHLG + P RGF++FYGILTGGG H+ H S + RG K R +G N+ + H+T LYT+K EY+ +M G P FL L+YQAIH PI+ R C + + RR C M+A V
Sbjct: 19 PNIVMMIVDDMGWGDVGYNSEMPKTVSTPTIDTLANEGIKFPHFYTSPTCTASRAALMTGKYPMHLGLQDSVIHPSEPRGVPLNEKFLSEKLKERAGYRTVFIGKWHLGFAQKAYAPTRRGFEEFYGILTGGGDHFEHSST-ETVAMRGPEYKQRATVMTGYNLWHNDVPVPLEEHQGVHTTTLYTRKTVEYINQMFPS-GLPVFLVLAYQAIHAPIQGSPK---ARQCPTAAT-------------GKRRAMCQMIASV 260 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15559.3870.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15559.3870.1 >prot_E-fasciculatus_F_contig15559.3870.1 ID=prot_E-fasciculatus_F_contig15559.3870.1|Name=mRNA_E-fasciculatus_F_contig15559.3870.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=291bp MSPVPWRAASAPLLALLSIGRVSQALGVGSSATTTENPNVLVVVVDDLGWback to top mRNA from alignment at E-fasciculatus_F_contig15559:435..2344- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15559.3870.1 ID=mRNA_E-fasciculatus_F_contig15559.3870.1|Name=mRNA_E-fasciculatus_F_contig15559.3870.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1910bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15559:435..2344- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15559:435..2344- >mRNA_E-fasciculatus_F_contig15559.3870.1 ID=mRNA_E-fasciculatus_F_contig15559.3870.1|Name=mRNA_E-fasciculatus_F_contig15559.3870.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1746bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15559:435..2344- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |