mRNA_E-fasciculatus_F_contig15556.3867.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig15556.3867.1
Unique NamemRNA_E-fasciculatus_F_contig15556.3867.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15556.3867.1 vs. uniprot
Match: D8LIR6_ECTSI (Myb-like DNA-binding domain containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIR6_ECTSI)

HSP 1 Score: 301 bits (772), Expect = 1.310e-89
Identity = 191/262 (72.90%), Postives = 208/262 (79.39%), Query Frame = 1 
Query:   22 PPGHPSVHANRSWGAWTLEEERHLCLAVRAIMPRERRTGVAAPPLEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSINTNMLEFFKGVNWPEVARLMSNGRSDKQCRLKWFEAIDPSVNRQRGWEAEEEARLRKAVEARGVGEWRAVEMDMANWAQKRGMLRRTDHACRRRYISLEPEKHEKHIRYVKDRREVEPRLNAPSFAAHGFGKTEVTLEDFDLVHD 807
            PP HP+   NRSWG WTL+EERHLCLAVRA+MPRERR G   PP       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         XXX                      + NTNML+ F+GVNW EVARLMSNGRSDKQCRLKWFEAIDPSVNRQR W+AEE+ARLRKAVEARG+GEWRAVEMDMA+WAQKRG+LRRTDH+CRRRYI++EPEKHEKH+RYV+DRREVEPRLNAP  AAHGFGKTEVTL+DFDLV D
Sbjct:  495 PPDHPNPRTNRSWGTWTLDEERHLCLAVRALMPRERRMG--GPPF-----GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGEPRPSGXXXRAPETGTRGGHPRKNGRSSSSSNSNTNMLDCFEGVNWQEVARLMSNGRSDKQCRLKWFEAIDPSVNRQREWDAEEDARLRKAVEARGMGEWRAVEMDMASWAQKRGVLRRTDHSCRRRYIAIEPEKHEKHLRYVQDRREVEPRLNAPCLAAHGFGKTEVTLKDFDLVDD 749
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15556.3867.1 vs. uniprot
Match: A0A8H4BNQ7_MUCCL (Uncharacterized protein n=2 Tax=Mucor circinelloides f. lusitanicus TaxID=29924 RepID=A0A8H4BNQ7_MUCCL)

HSP 1 Score: 60.8 bits (146), Expect = 4.760e-6
Identity = 31/97 (31.96%), Postives = 58/97 (59.79%), Query Frame = 1 
Query:  376 TNMLEFFKGVNWPEVARLMSNGRSDKQCRLKWFEAIDPSVNRQRGWEAEEEARLRKAVEARGVGEWRAVEMDMANWAQKRGMLRRTDHACRRRYISL 666
            T+ ++ F   NW +VA ++ + R+ +QC  +W ++++P + RQR W A+E+A L++AV+  G G W  ++         R +  RTD  CR R++++
Sbjct:  370 TDAVKLFGNCNWQQVANILGD-RTGQQCLHRWQKSLNPVIKRQR-WNADEDALLQRAVQLYGAGNWTKIQ---------RLIPGRTDMQCRERWVNI 455
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15556.3867.1 vs. uniprot
Match: A0A8H7R8G8_9FUNG (Uncharacterized protein n=1 Tax=Mucor plumbeus TaxID=97098 RepID=A0A8H7R8G8_9FUNG)

HSP 1 Score: 60.5 bits (145), Expect = 6.480e-6
Identity = 33/97 (34.02%), Postives = 55/97 (56.70%), Query Frame = 1 
Query:  376 TNMLEFFKGVNWPEVARLMSNGRSDKQCRLKWFEAIDPSVNRQRGWEAEEEARLRKAVEARGVGEWRAVEMDMANWAQKRGMLRRTDHACRRRYISL 666
            T+ ++ F   NW +VA ++   R+ +QC  +W ++I+P + RQR W AEE+A L +AV   G G W  ++         R +  RTD  CR R++++
Sbjct:  385 TDAVKLFGNCNWQQVADILGE-RTGQQCLHRWQKSINPVIKRQR-WNAEEDALLERAVHLYGAGNWTKIQ---------RLIPGRTDMQCRERWVNI 470
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15556.3867.1 vs. uniprot
Match: A0A7S3G4L6_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3G4L6_9EUKA)

HSP 1 Score: 59.3 bits (142), Expect = 1.220e-5
Identity = 37/106 (34.91%), Postives = 56/106 (52.83%), Query Frame = 1 
Query:  400 GVNWPEVARLMSNGRSDKQCRLKWFEAIDPSVNRQRGWEAEEEARLRKAVEARGVGEWRAVEMDMANWAQKRGMLRRTDHACRRRYISLEPEKHEKHIRYVKDRRE 717
            G NW +VA  +  GR+D QCR ++   +DPS+NRQ  W ++E+  L + ++  GVG W  +   M           RTD+ C RR+  L+P  H     Y  ++RE
Sbjct:  208 GRNWAKVAEHVQ-GRTDVQCRERFVNVLDPSLNRQ-PWSSQEDDLLLQIIKRVGVGNWSVIAQQMDGT--------RTDNQCLRRWKELDPAAHSN---YCSEKRE 300
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15556.3867.1 vs. uniprot
Match: S2IUR0_MUCC1 (Uncharacterized protein n=1 Tax=Mucor circinelloides f. circinelloides (strain 1006PhL) TaxID=1220926 RepID=S2IUR0_MUCC1)

HSP 1 Score: 58.9 bits (141), Expect = 1.900e-5
Identity = 31/97 (31.96%), Postives = 56/97 (57.73%), Query Frame = 1 
Query:  376 TNMLEFFKGVNWPEVARLMSNGRSDKQCRLKWFEAIDPSVNRQRGWEAEEEARLRKAVEARGVGEWRAVEMDMANWAQKRGMLRRTDHACRRRYISL 666
            T+ ++ F   NW +VA ++ + R+ +QC  +W ++++P + RQR W AEE+  L++AV   G G W  ++         R +  RTD  CR R++++
Sbjct:  372 TDAVKLFGNCNWQQVADILGD-RTGQQCLHRWQKSLNPVIKRQR-WNAEEDTLLQRAVHLYGAGNWTKIQ---------RLIPGRTDMQCRERWVNI 457
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15556.3867.1 vs. uniprot
Match: A0A0C9MLS2_9FUNG (Uncharacterized protein n=1 Tax=Mucor ambiguus TaxID=91626 RepID=A0A0C9MLS2_9FUNG)

HSP 1 Score: 58.9 bits (141), Expect = 2.350e-5
Identity = 31/97 (31.96%), Postives = 56/97 (57.73%), Query Frame = 1 
Query:  376 TNMLEFFKGVNWPEVARLMSNGRSDKQCRLKWFEAIDPSVNRQRGWEAEEEARLRKAVEARGVGEWRAVEMDMANWAQKRGMLRRTDHACRRRYISL 666
            T+ ++ F   NW +VA ++ + R+ +QC  +W ++++P + RQR W  EE+A L++AV   G G W  ++         R +  RTD  CR R++++
Sbjct:  369 TDAVKLFGNCNWQQVADILGD-RTGQQCLHRWQKSLNPVIKRQR-WNTEEDALLQRAVHLYGAGNWTKIQ---------RLIPGRTDMQCRERWVNI 454
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15556.3867.1 vs. uniprot
Match: A0A067L078_JATCU (MYB family protein n=1 Tax=Jatropha curcas TaxID=180498 RepID=A0A067L078_JATCU)

HSP 1 Score: 58.9 bits (141), Expect = 2.460e-5
Identity = 36/91 (39.56%), Postives = 50/91 (54.95%), Query Frame = 1 
Query:  406 NWPEVARLMSNGRSDKQCRLKWFEAIDPSVNRQRGWEAEEEARLRKAVEARGVGEWRAVEMDMANWAQ-KRGMLRRTDHACRRRYISLEPE 675
            NW  +AR +  GR+D QCR +W   IDPS+N  + W  EE+ RL+ A+E  G             WA+  R +  RTD  CRRR+ +L P+
Sbjct:  548 NWKNIARFVP-GRADVQCRERWSNCIDPSLNMDK-WTEEEDIRLKTAIEEHGYC-----------WAKVARHLPSRTDSQCRRRWKALFPD 625
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15556.3867.1 vs. uniprot
Match: A0A0B7NI71_9FUNG (Uncharacterized protein n=1 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7NI71_9FUNG)

HSP 1 Score: 58.2 bits (139), Expect = 3.190e-5
Identity = 31/97 (31.96%), Postives = 55/97 (56.70%), Query Frame = 1 
Query:  376 TNMLEFFKGVNWPEVARLMSNGRSDKQCRLKWFEAIDPSVNRQRGWEAEEEARLRKAVEARGVGEWRAVEMDMANWAQKRGMLRRTDHACRRRYISL 666
            T+ ++ F   NW +VA ++   R+ +QC  +W ++++P + RQR W  EE+A L++AV   G G W  ++         R +  RTD  CR R++++
Sbjct:  347 TDAVKLFGNCNWQQVADILGE-RTGQQCLHRWQKSLNPVIKRQR-WNTEEDALLKRAVYLYGAGNWTKIQ---------RLIPGRTDMQCRERWVNI 432
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15556.3867.1 vs. uniprot
Match: A0A7C9CE69_OPUST (Uncharacterized protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9CE69_OPUST)

HSP 1 Score: 53.1 bits (126), Expect = 5.090e-5
Identity = 32/89 (35.96%), Postives = 47/89 (52.81%), Query Frame = 1 
Query:  406 NWPEVARLMSNGRSDKQCRLKWFEAIDPSVNRQRGWEAEEEARLRKAVEARGVGEWRAVEMDMANWAQKRGMLRRTDHACRRRYISLEP 672
            NW  +A+ +  GR+  QCR +W   +DPS+NR   W  EE+ RL+ A+   G   W  +   +A+         RTD+ CRRR+  L P
Sbjct:    8 NWHRIAQFVP-GRTQAQCRERWVNVLDPSLNRG-AWTEEEDLRLKAAIVEHGYC-WSRIAACLAS---------RTDNQCRRRWKRLFP 84
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15556.3867.1 vs. uniprot
Match: A0A835RYW0_VANPL (Uncharacterized protein n=2 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835RYW0_VANPL)

HSP 1 Score: 57.0 bits (136), Expect = 8.800e-5
Identity = 34/94 (36.17%), Postives = 52/94 (55.32%), Query Frame = 1 
Query:  394 FKGVNWPEVARLMSNGRSDKQCRLKWFEAIDPSVNRQRGWEAEEEARLRKAVEARGVGEWRAVEMDMANWAQKRGML-RRTDHACRRRYISLEP 672
            F   NW ++A+ +  GR+  QCR +W   +DPS+N +R W  EE+A+L  A+E  G            +W++    + RRTD+ CRRR+  L P
Sbjct:  585 FGAKNWKKLAQFIE-GRTQSQCRERWLNCLDPSLNLER-WTEEEDAKLLAAIEEHGH-----------SWSKVAACVPRRTDNQCRRRWKVLLP 665
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15556.3867.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LIR6_ECTSI1.310e-8972.90Myb-like DNA-binding domain containing protein n=2... [more]
A0A8H4BNQ7_MUCCL4.760e-631.96Uncharacterized protein n=2 Tax=Mucor circinelloid... [more]
A0A8H7R8G8_9FUNG6.480e-634.02Uncharacterized protein n=1 Tax=Mucor plumbeus Tax... [more]
A0A7S3G4L6_9EUKA1.220e-534.91Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
S2IUR0_MUCC11.900e-531.96Uncharacterized protein n=1 Tax=Mucor circinelloid... [more]
A0A0C9MLS2_9FUNG2.350e-531.96Uncharacterized protein n=1 Tax=Mucor ambiguus Tax... [more]
A0A067L078_JATCU2.460e-539.56MYB family protein n=1 Tax=Jatropha curcas TaxID=1... [more]
A0A0B7NI71_9FUNG3.190e-531.96Uncharacterized protein n=1 Tax=Parasitella parasi... [more]
A0A7C9CE69_OPUST5.090e-535.96Uncharacterized protein (Fragment) n=1 Tax=Opuntia... [more]
A0A835RYW0_VANPL8.800e-536.17Uncharacterized protein n=2 Tax=Vanilla planifolia... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15556contigE-fasciculatus_F_contig15556:1..2938 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score265.4
Seed ortholog evalue2.8e-68
Seed eggNOG ortholog2880.D8LIR6
EggNOG free text desc.RNA polymerase II transcription regulator recruiting activity
EggNOG OGsCOG5147@1,KOG0048@2759
COG Functional cat.ADK
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size1706
Cds size774
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15556.3867.1prot_E-fasciculatus_F_contig15556.3867.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig15556 115..2120 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928029.370637-UTR-E-fasciculatus_F_contig15556:0..1141622928029.370637-UTR-E-fasciculatus_F_contig15556:0..114Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig15556 1..114 +
1695995795.2200382-UTR-E-fasciculatus_F_contig15556:0..1141695995795.2200382-UTR-E-fasciculatus_F_contig15556:0..114Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig15556 1..114 +
1622928029.4114456-UTR-E-fasciculatus_F_contig15556:2120..29381622928029.4114456-UTR-E-fasciculatus_F_contig15556:2120..2938Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig15556 2121..2938 +
1695995795.2638438-UTR-E-fasciculatus_F_contig15556:2120..29381695995795.2638438-UTR-E-fasciculatus_F_contig15556:2120..2938Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig15556 2121..2938 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928029.38133-CDS-E-fasciculatus_F_contig15556:114..5441622928029.38133-CDS-E-fasciculatus_F_contig15556:114..544Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15556 115..544 +
1695995795.231969-CDS-E-fasciculatus_F_contig15556:114..5441695995795.231969-CDS-E-fasciculatus_F_contig15556:114..544Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15556 115..544 +
1622928029.3913906-CDS-E-fasciculatus_F_contig15556:1086..12381622928029.3913906-CDS-E-fasciculatus_F_contig15556:1086..1238Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15556 1087..1238 +
1695995795.243348-CDS-E-fasciculatus_F_contig15556:1086..12381695995795.243348-CDS-E-fasciculatus_F_contig15556:1086..1238Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15556 1087..1238 +
1622928029.401361-CDS-E-fasciculatus_F_contig15556:1928..21201622928029.401361-CDS-E-fasciculatus_F_contig15556:1928..2120Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15556 1929..2120 +
1695995795.2544775-CDS-E-fasciculatus_F_contig15556:1928..21201695995795.2544775-CDS-E-fasciculatus_F_contig15556:1928..2120Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15556 1929..2120 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig15556.3867.1

>prot_E-fasciculatus_F_contig15556.3867.1 ID=prot_E-fasciculatus_F_contig15556.3867.1|Name=mRNA_E-fasciculatus_F_contig15556.3867.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=258bp
MPRERRTGVAAPPLEGGEGGGGGAAAAAAAAAAGKKNGGEGRKKKRQRRD
CDGGEPGGGGGAPQTGARGARPPSTTTTTTTTSSSINTNMLEFFKGVNWP
EVARLMSNGRSDKQCRLKWFEAIDPSVNRQRGWEAEEEARLRKAVEARGV
GEWRAVEMDMANWAQKRGMLRRTDHACRRRYISLEPEKHEKHIRYVKDRR
EVEPRLNAPSFAAHGFGKTEVTLEDFDLVHDDFDGSNDDGGGGGDGGGDN
GDIDDEW*
back to top

mRNA from alignment at E-fasciculatus_F_contig15556:1..2938+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig15556.3867.1 ID=mRNA_E-fasciculatus_F_contig15556.3867.1|Name=mRNA_E-fasciculatus_F_contig15556.3867.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2938bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15556:1..2938+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CGGGACCACCACCACCACCGGCCCCCCGGCCACCCCAGCGTGCACGCGAA
CCGGAGCTGGGGCGCCTGGACGCTGGAGGAGGAGCGCCACCTCTGCCTCG
CGGTGCGGGCGATCATGCCGAGGGAGAGGCGGACGGGGGTGGCGGCCCCG
CCGTTGGAGGGCGGCGAGGGGGGGGGGGGGGGGGCTGCTGCTGCTGCTGC
TGCTGCTGCCGCGGGGAAGAAGAACGGTGGCGAAGGGAGGAAGAAAAAGA
GGCAGCGGCGAGATTGTGATGGTGGCGAGCCCGGGGGCGGGGGGGGGGCA
CCGCAGACGGGAGCACGAGGGGCACGCCCTCCAAGCACCACCACCACCAC
CACCACCACCAGCAGCAGCATCAATACCAACATGCTAGAGTTCTTCAAGG
GGGTGAACTGGCCGGAGGTGGCGAGGCTCATGTCGAACGGGAGGAGCGAC
AAGCAGTGCCGGCTCAAGTGGTTCGAGGCGATCGACCCCTCCGTGAACCG
TCAAAGGGGGTGGGAAGCCGAGGAGGAGGCGCGGCTACGCAAGGGTGAGA
GGTGGTGGTTTAGTGCTGGCGGTGATTGTGTGTCATAAGAGAGTGTAGCG
CCCACGATTAACAAGTAAAACTTTCAAGAAACAAAGGGTCAGGTTTTGGC
AAAAAGTAAGAAGAATAGACCAAGTATTTCAAAGAGCTATGCTCGACGGT
GTGATGACATAAAAACAATGAGCCTACACCTCAAATTGACGTCTTTTCAA
GCGGGCGCTGGCTGCTGTACAGTGGTGTTGGCAGTGTCTGTCTTGCGAAG
TACTGCTTGGTTTGTACAACAAACCCTACAGCTGTAAGACTTGTCCCCTC
ACGTGCGGGGGGGAGATGGAGTCGTAGAGTCGTATGAAATGTGCCAATAT
TTGCAGCCCAACGGCCCGTGTTTGTGGCGAATGAGTGCACCCCCATGCGA
CCGCCAGTTCCAACCCCCAAGGCTCTATCCCGTGCCATCTCTAGCTCTCG
AAATTGGGGGCAGAAGACGCCACTCACAACGCTATCCCTTTAACGATCCG
CTAAAAAAAAACTCGTGTCCGCCGTCCGTCCGGCAGCGGTGGAGGCTAGG
GGGGTGGGGGAGTGGAGGGCCGTGGAGATGGACATGGCGAACTGGGCGCA
GAAGCGGGGAATGCTCAGGCGCACCGACCACGCGTGCAGGAGGAGGTACA
TCAGCCTCGAGCCGGAAAAACACGAGAAACACATAAGGGTAAGTTCTGTT
TTTTTTTTCCCTCTCGAGCGGAGTGGACAACAAACAACACGCAGCACTCA
CGGGGTCGGGTCCCAGATCAGATCACGGTGTAGCCTTCAGAACCATTTCT
CTGTTTTCGGCCGCGCTGAGACTGAAGTCTCTTCATGGATCCGGCGGTTA
TTGCTACTACATCAAGACATGCACAGCAGTCGATAGCGTGGCAACTTGTG
CTGTCTAAGGGGTTACGTGTAGGTCGTGTCGATTCTGGCTTTGGATTGCG
GCTTGAGGATAATCATATGATGTAATAGTCGCGTCAGTAGCGCAAGCATG
CTTTTTTTTTTTTTGTTAGCCCGTGAGAGCCCGCTTCTCCTTTGCACACG
TTGTGTGTGTTTGTTCGTCCGGTTGGCCGATTCCTCGCCCGATGTTGACG
CGATAGTTTTGACACCCCGTAGAACACGTTGCTCAACAGAACGTTTGGGA
CGTGTTGACGCAAGCCCAACCCCCCACCACCTGGCTCCCTTTGTTTCAAC
ATGCCCGTGCGCGTTTACTCTCCCTCTGCTTTCGATGTCAACCCAAGCCT
GCTGTCGCAGTACATGCAAGAAGCCCAACCCGCCACCCTGGCTCCCGTGG
CAACCTTAGTTTTGAACATGCTCGCGTGTGCTCTCGCTTTTCTTTTTCGA
TGCCAACCGAAACTGCTTCCTTTTCCAGTACGTGAAAGACCGGCGGGAGG
TAGAGCCGAGGCTCAACGCCCCCTCCTTCGCCGCCCACGGTTTCGGCAAG
ACAGAGGTCACCCTGGAGGACTTCGACCTTGTCCACGACGACTTCGACGG
AAGCAACGATGACGGCGGCGGCGGCGGCGACGGCGGCGGCGACAACGGCG
ACATTGACGACGAGTGGTAGCGGCGGCGTTAATTGTTTGTTCTTGTTGGT
GGTGCCTGCTTGTCTGTCGCTGCGTACAACAGCTAAGGGCCAGCAATTCA
GAACCTCTTGTTTTGGCCAAGGCTCGTGTGTGTCTTGTTTTGTCTATAGG
GGCATCTATCCTAACGACCACTATCTAAGAGTAGGCTTGTTGACTGAGCA
GCCTGTTCTTATGGTCAAGTTCTCCGACTTCGGAGATTTTGAGGCTCAAG
CTCTTAACAACCTAGGTTTTGAGTGCGGGCCGGTTCGTTATGTACATGTA
GCTGTTGATCTTGTTTCTTCGCATTTTATAGAGGGGTCCACGGGGTCGTG
ATTTGTGATGTGTGTTCTGAGAGACGAGAGGACCAAGGGAGCAAGGGGGT
TCCGCAGATTTCTTGTTTGGTTTTGGCGAGCGAATGTCTCCTTCTCTGGG
AAGATGAACAACAACAATCATCGAGGTTTTCGAAGCGCATCGAGAAGCAC
GAAATCGTGGGCGACGGAAAGGCACCCGCCCTCCGTGGCCACTTGCATTG
TACGTAAATGCGGCGGAAATAGATTTATTAGATCTAAGTGAACTGAGAGT
GTACCTGAGACTGTGCCTGCTTTTGCGAGAGGGGTTTGTGGTCAGTAGTC
GAGACTTGGCAACAAACGAAGCGCTCCCCCCGTTCCCTCCACGGCAGTTG
GTGGGCCGTTGGTTGATGATGAAAGATTTGGTTCCTCCCTAACGAGAGCA
AAGCCGGTTAGTCAGGTCGTTTCCATTATTCTATTGGCATCCCGGGAGCT
TTCTGGACAAAGCAAAAAAGCAAGGGAAATGCCTACAA
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15556:1..2938+

>mRNA_E-fasciculatus_F_contig15556.3867.1 ID=mRNA_E-fasciculatus_F_contig15556.3867.1|Name=mRNA_E-fasciculatus_F_contig15556.3867.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1548bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15556:1..2938+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCCGAGGGAGAGGCGGACGGGGGTGGCGGCCCCGCCGTTGGAGGGCGG
CGAGGGGGGGGGGGGGGGGGCTGCTGCTGCTGCTGCTGCTGCTGCCGCGG
GGAAGAAGAACGGTGGCGAAGGGAGGAAGAAAAAGAGGCAGCGGCGAGAT
TGTGATGGTGGCGAGCCCGGGGGCGGGGGGGGGGCACCGCAGACGGGAGC
ACGAGGGGCACGCCCTCCAAGCACCACCACCACCACCACCACCACCAGCA
GCAGCATCAATACCAACATGCTAGAGTTCTTCAAGGGGGTGAACTGGCCG
GAGGTGGCGAGGCTCATGTCGAACGGGAGGAGCGACAAGCAGTGCCGGCT
CAAGTGGTTCGAGGCGATCGACCCCTCCGTGAACCGTCAAAGGGGGTGGG
AAGCCGAGGAGGAGGCGCGGCTACGCAAGGATGCCGAGGGAGAGGCGGAC
GGGGGTGGCGGCCCCGCCGTTGGAGGGCGGCGAGGGGGGGGGGGGGGGGG
CTGCTGCTGCTGCTGCTGCTGCTGCCGCGGGGAAGAAGAACGGTGGCGAA
GGGAGGAAGAAAAAGAGGCAGCGGCGAGATTGTGATGGTGGCGAGCCCGG
GGGCGGGGGGGGGGCACCGCAGACGGGAGCACGAGGGGCACGCCCTCCAA
GCACCACCACCACCACCACCACCACCAGCAGCAGCATCAATACCAACATG
CTAGAGTTCTTCAAGGGGGTGAACTGGCCGGAGGTGGCGAGGCTCATGTC
GAACGGGAGGAGCGACAAGCAGTGCCGGCTCAAGTGGTTCGAGGCGATCG
ACCCCTCCGTGAACCGTCAAAGGGGGTGGGAAGCCGAGGAGGAGGCGCGG
CTACGCAAGGCGGTGGAGGCTAGGGGGGTGGGGGAGTGGAGGGCCGTGGA
GATGGACATGGCGAACTGGGCGCAGAAGCGGGGAATGCTCAGGCGCACCG
ACCACGCGTGCAGGAGGAGGTACATCAGCCTCGAGCCGGAAAAACACGAG
AAACACATAAGGCGGTGGAGGCTAGGGGGGTGGGGGAGTGGAGGGCCGTG
GAGATGGACATGGCGAACTGGGCGCAGAAGCGGGGAATGCTCAGGCGCAC
CGACCACGCGTGCAGGAGGAGGTACATCAGCCTCGAGCCGGAAAAACACG
AGAAACACATAAGGTACGTGAAAGACCGGCGGGAGGTAGAGCCGAGGCTC
AACGCCCCCTCCTTCGCCGCCCACGGTTTCGGCAAGACAGAGGTCACCCT
GGAGGACTTCGACCTTGTCCACGACGACTTCGACGGAAGCAACGATGACG
GCGGCGGCGGCGGCGACGGCGGCGGCGACAACGGCGACATTGACGACGAG
TGGTAGTACGTGAAAGACCGGCGGGAGGTAGAGCCGAGGCTCAACGCCCC
CTCCTTCGCCGCCCACGGTTTCGGCAAGACAGAGGTCACCCTGGAGGACT
TCGACCTTGTCCACGACGACTTCGACGGAAGCAACGATGACGGCGGCGGC
GGCGGCGACGGCGGCGGCGACAACGGCGACATTGACGACGAGTGGTAG
back to top