mRNA_E-fasciculatus_F_contig15548.3860.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15548.3860.1 vs. uniprot
Match: D7FH16_ECTSI (Zinc finger family protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH16_ECTSI) HSP 1 Score: 254 bits (649), Expect = 1.490e-80 Identity = 144/190 (75.79%), Postives = 146/190 (76.84%), Query Frame = 1
Query: 1 RCKRSPYHYGAECDEVVRLSREWSHWLSEGKAAFLGVMAAQDDQHRALLDRXXXXXXXXXXXXXXXXXXXXXXERMEEWKEQRCRCCPHCGRTIEKLSGCDIMASTLMAGTFRMGAARASPGLWHGLTRPIGESARQRRSPNKSRRRRLARGTSLPMESRSGATAATGTLSGPSSAACTAHRSPAAWSVR 570
RCKRSPYHY AECDEVVRLSREWSHWLSEGKAAFLG MAAQDDQHRALLDR XXXXXXXXX ERMEEWKEQRCRCCPHCGRTIEKLSGCD+MASTLMAGTFRM AAR S G+ HGLT IGESARQRRSPNKSRRRRLARGTS ACTAHRS AAWSVR
Sbjct: 213 RCKRSPYHYAAECDEVVRLSREWSHWLSEGKAAFLGAMAAQDDQHRALLDRHNRKKXXXXXXXXXAQRVRLEYERMEEWKEQRCRCCPHCGRTIEKLSGCDMMASTLMAGTFRMAAARDSRGVEHGLTEAIGESARQRRSPNKSRRRRLARGTSXXXXXXXXXXXXXXXXXXXXXXACTAHRSRAAWSVR 402
BLAST of mRNA_E-fasciculatus_F_contig15548.3860.1 vs. uniprot
Match: A0A6H5K3X2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3X2_9PHAE) HSP 1 Score: 175 bits (443), Expect = 1.130e-47 Identity = 77/87 (88.51%), Postives = 79/87 (90.80%), Query Frame = 3
Query: 309 GVDAHGGNVQNGCGARFSWALARPYQADRGECKATPFTEQEPEAAARSRHFIADGIALRCDRCHRDVVGPLFRCVHCPSFACCLECQ 569
GVD HGGNVQNGCG F W+ ARPY+ DRGECK TPFTEQEP AAARSRHFIADGIALRCDRCHRDVVGPLFRCVHCPSFACCLECQ
Sbjct: 592 GVDTHGGNVQNGCGKSFLWSQARPYRGDRGECKVTPFTEQEPAAAARSRHFIADGIALRCDRCHRDVVGPLFRCVHCPSFACCLECQ 678
BLAST of mRNA_E-fasciculatus_F_contig15548.3860.1 vs. uniprot
Match: A0A4D9D9T2_9STRA (RING-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9T2_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 3.610e-20 Identity = 44/88 (50.00%), Postives = 56/88 (63.64%), Query Frame = 3
Query: 309 GVDAHGGNVQNGCGARFSWALARPYQADRGECKA-TPFTEQEPEAAARSRHFIADGIALRCDRCHRDVVGPLFRCVHCPSFACCLECQ 569
G +AHGGN+QNGCG F W A Y AD GE ++ PF E P AR H I DG ++CD C ++GPL C++CPSF+CC+ CQ
Sbjct: 481 GQNAHGGNIQNGCGQAFDWNDALLYVADIGEKRSIVPFQEVPPAEIARVEHQIMDGTPVKCDVCSAKIMGPLAMCINCPSFSCCIRCQ 568
BLAST of mRNA_E-fasciculatus_F_contig15548.3860.1 vs. uniprot
Match: A0A814MX83_9BILA (RBR-type E3 ubiquitin transferase n=2 Tax=Rotaria sordida TaxID=392033 RepID=A0A814MX83_9BILA) HSP 1 Score: 78.6 bits (192), Expect = 5.190e-14 Identity = 38/87 (43.68%), Postives = 51/87 (58.62%), Query Frame = 3
Query: 309 GVDAHGGNVQNGCGARFSWALARPYQADRGECKATPFTEQEPEAAARSRHFIADGIALRCDRCHRDVVGPLFRCVHCPSFACCLECQ 569
G DAHGGN+Q+GCGA+F+WA A+ Y A ATP +Q + + + ++CD C DVVG F CVHCPS C +C+
Sbjct: 192 GQDAHGGNLQSGCGAKFNWAQAQQYNA-----AATPQPKQVILDLPKPENPVVHHNGVKCDHCQNDVVGIRFDCVHCPSLTYCEKCE 273
BLAST of mRNA_E-fasciculatus_F_contig15548.3860.1 vs. uniprot
Match: A0A812RJH2_9DINO (RNF14 protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812RJH2_9DINO) HSP 1 Score: 79.0 bits (193), Expect = 7.620e-14 Identity = 39/90 (43.33%), Postives = 45/90 (50.00%), Query Frame = 3
Query: 309 GVDAHGGNVQNGCGARFSWALARPYQADRGECKATPFTEQEPEAAARSRHFIADGIA---LRCDRCHRDVVGPLFRCVHCPSFACCLECQ 569
G D HGGN Q GCG RF W AR YQA P + P + GI RC RCH+D+VGP FRC+HCP + C C
Sbjct: 252 GEDTHGGNRQQGCGHRFQWDKARAYQA-------APDSRPLPRLDVQDVKVRGAGIRHPFCRCSRCHQDIVGPRFRCIHCPDYNLCASCD 334
BLAST of mRNA_E-fasciculatus_F_contig15548.3860.1 vs. uniprot
Match: A0A813U5D0_9BILA (RBR-type E3 ubiquitin transferase n=4 Tax=Rotaria sordida TaxID=392033 RepID=A0A813U5D0_9BILA) HSP 1 Score: 78.6 bits (192), Expect = 1.450e-13 Identity = 38/87 (43.68%), Postives = 51/87 (58.62%), Query Frame = 3
Query: 309 GVDAHGGNVQNGCGARFSWALARPYQADRGECKATPFTEQEPEAAARSRHFIADGIALRCDRCHRDVVGPLFRCVHCPSFACCLECQ 569
G DAHGGN+Q+GCGA+F+WA A+ Y A ATP +Q + + + ++CD C DVVG F CVHCPS C +C+
Sbjct: 994 GQDAHGGNLQSGCGAKFNWAQAQQYNA-----AATPQPKQVILDLPKPENPVVHHNGVKCDHCQNDVVGIRFDCVHCPSLTYCEKCE 1075
BLAST of mRNA_E-fasciculatus_F_contig15548.3860.1 vs. uniprot
Match: A0A818CU47_9BILA (RBR-type E3 ubiquitin transferase n=1 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A818CU47_9BILA) HSP 1 Score: 78.2 bits (191), Expect = 1.730e-13 Identity = 38/87 (43.68%), Postives = 51/87 (58.62%), Query Frame = 3
Query: 309 GVDAHGGNVQNGCGARFSWALARPYQADRGECKATPFTEQEPEAAARSRHFIADGIALRCDRCHRDVVGPLFRCVHCPSFACCLECQ 569
G DAHGGNVQ+GCGA+F+WA A+ Y A ATP +Q + + + ++CD C D+VG F CVHCPS C +C+
Sbjct: 444 GQDAHGGNVQSGCGAKFNWAQAQNYTA-----AATPQPKQTILDLPKPENPVVHHNGVKCDHCQNDLVGIRFDCVHCPSLTFCEKCE 525
BLAST of mRNA_E-fasciculatus_F_contig15548.3860.1 vs. uniprot
Match: A0A813XJQ9_9BILA (RBR-type E3 ubiquitin transferase n=10 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A813XJQ9_9BILA) HSP 1 Score: 78.2 bits (191), Expect = 1.970e-13 Identity = 38/87 (43.68%), Postives = 51/87 (58.62%), Query Frame = 3
Query: 309 GVDAHGGNVQNGCGARFSWALARPYQADRGECKATPFTEQEPEAAARSRHFIADGIALRCDRCHRDVVGPLFRCVHCPSFACCLECQ 569
G DAHGGNVQ+GCGA+F+WA A+ Y A ATP +Q + + + ++CD C D+VG F CVHCPS C +C+
Sbjct: 1001 GQDAHGGNVQSGCGAKFNWAQAQNYTA-----AATPQPKQTILDLPKPENPVVHHNGVKCDHCQNDLVGIRFDCVHCPSLTFCEKCE 1082
BLAST of mRNA_E-fasciculatus_F_contig15548.3860.1 vs. uniprot
Match: A0A815ESE8_ADIRI (RBR-type E3 ubiquitin transferase n=1 Tax=Adineta ricciae TaxID=249248 RepID=A0A815ESE8_ADIRI) HSP 1 Score: 75.5 bits (184), Expect = 3.810e-13 Identity = 39/87 (44.83%), Postives = 49/87 (56.32%), Query Frame = 3
Query: 309 GVDAHGGNVQNGCGARFSWALARPYQADRGECKATPFTEQEPEAAARSRHFIADGIALRCDRCHRDVVGPLFRCVHCPSFACCLECQ 569
G DAHGGNVQ+GCG RF+WA A+ YQA AT +Q R + I + CD+C +V G F CVHCPS C +C+
Sbjct: 140 GQDAHGGNVQSGCGHRFNWAQAKAYQAS-----ATKQPKQTILDLPRPENAIVHHNGVTCDQCKNEVNGIRFDCVHCPSLTFCEKCE 221
BLAST of mRNA_E-fasciculatus_F_contig15548.3860.1 vs. uniprot
Match: A0A813YUI2_9BILA (RBR-type E3 ubiquitin transferase n=2 Tax=Rotaria sordida TaxID=392033 RepID=A0A813YUI2_9BILA) HSP 1 Score: 77.0 bits (188), Expect = 4.660e-13 Identity = 37/87 (42.53%), Postives = 50/87 (57.47%), Query Frame = 3
Query: 309 GVDAHGGNVQNGCGARFSWALARPYQADRGECKATPFTEQEPEAAARSRHFIADGIALRCDRCHRDVVGPLFRCVHCPSFACCLECQ 569
G DAHGGN+Q+GCGA+F+W A+ Y A ATP +Q + + + ++CD C DVVG F CVHCPS C +C+
Sbjct: 646 GQDAHGGNLQSGCGAKFNWTQAQQYNA-----AATPQPKQVILDLPKPENPVVHHNGVKCDHCQNDVVGIRFDCVHCPSLTYCEKCE 727 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15548.3860.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15548.3860.1 >prot_E-fasciculatus_F_contig15548.3860.1 ID=prot_E-fasciculatus_F_contig15548.3860.1|Name=mRNA_E-fasciculatus_F_contig15548.3860.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=191bp RCKRSPYHYGAECDEVVRLSREWSHWLSEGKAAFLGVMAAQDDQHRALLDback to top mRNA from alignment at E-fasciculatus_F_contig15548:525..2820- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15548.3860.1 ID=mRNA_E-fasciculatus_F_contig15548.3860.1|Name=mRNA_E-fasciculatus_F_contig15548.3860.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2296bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15548:525..2820- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15548:525..2820- >mRNA_E-fasciculatus_F_contig15548.3860.1 ID=mRNA_E-fasciculatus_F_contig15548.3860.1|Name=mRNA_E-fasciculatus_F_contig15548.3860.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1146bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15548:525..2820- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |