mRNA_E-fasciculatus_F_contig15542.3858.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15542.3858.1 vs. uniprot
Match: D7FWW4_ECTSI (Protein required for templated centriole assembly n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW4_ECTSI) HSP 1 Score: 213 bits (542), Expect = 1.560e-64 Identity = 159/166 (95.78%), Postives = 161/166 (96.99%), Query Frame = 1
Query: 1 VEGITQKTGSAKKFPVFVKMLLAALGHDSSGS-GSVFVDLLTYADLELLKARRVGSTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--NKRYLILTYAAEYDRVHYPLPLAFVDSPQRQQLERTIDRLREDLSRRSLETATPARNGSKNDRAAEAQLVA 489
VEGITQKTGSAK+FPVFVKMLLAALGHDSS S GSVFVDLLTYADLELLKARRVGS NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NKRYLILTYAAEYDRVHYPLPLAFVDSPQRQQLERTIDRLRE+LSRRSLETATPARNGSKNDRAAEAQLVA
Sbjct: 56 VEGITQKTGSAKRFPVFVKMLLAALGHDSSSSSGSVFVDLLTYADLELLKARRVGSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKRYLILTYAAEYDRVHYPLPLAFVDSPQRQQLERTIDRLREELSRRSLETATPARNGSKNDRAAEAQLVA 221
BLAST of mRNA_E-fasciculatus_F_contig15542.3858.1 vs. uniprot
Match: A0A6H5JQA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQA1_9PHAE) HSP 1 Score: 184 bits (466), Expect = 8.300e-54 Identity = 110/164 (67.07%), Postives = 113/164 (68.90%), Query Frame = 1
Query: 1 VEGITQKTGSAKKFPVFVKMLLAALGHDSSGS-GSVFVDLLTYADLELLKARRVGSTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKRYLILTYAAEYDRVHYPLPLAFVDSPQRQQLERTIDRLREDLSRRSLETATPARNGSKNDRAAEAQLVA 489
VEGITQKTGSAKKFPVFVKMLL ALGHDSS S GSVFVDLLTYADL + RYLILTYAAEYDRVHYPLPLAFVDSPQRQQLERTIDRLRE+LSRRSLETATPARNGSKNDRAAEAQL+A
Sbjct: 18 VEGITQKTGSAKKFPVFVKMLLDALGHDSSSSSGSVFVDLLTYADL--------------------------------------------GNCHNRYLILTYAAEYDRVHYPLPLAFVDSPQRQQLERTIDRLREELSRRSLETATPARNGSKNDRAAEAQLMA 137
BLAST of mRNA_E-fasciculatus_F_contig15542.3858.1 vs. uniprot
Match: A0A3R7AUF9_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7AUF9_9STRA) HSP 1 Score: 104 bits (259), Expect = 8.120e-25 Identity = 68/160 (42.50%), Postives = 88/160 (55.00%), Query Frame = 1
Query: 1 VEGITQKTGSAKKFPVFVKMLLAALGHDSSGSGSVFVDLLTYADLELLKARRVGSTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKRYLILTYAAEYDRVHYPLPLAFVDSPQRQQLERTIDRLREDLSRRSLETATPARNGSKNDRAAEAQ 480
VE +T+KTG+ K+F FV ML++AL H S SVF+DLLTY+DLEL + R++G + NKRYLILTYA E+DRVHYPLPL FV++P L+RTI RL++ L LET T + +G N A Q
Sbjct: 6 VEELTKKTGNFKRFYTFVNMLMSALQHKSE---SVFIDLLTYSDLELYRKRKLGKS----------------------APSPNLPDPVAALNNKRYLILTYAVEFDRVHYPLPLNFVETPSPAMLQRTIRRLKQTL----LETRTASIDGPANKTLASMQ 136
BLAST of mRNA_E-fasciculatus_F_contig15542.3858.1 vs. uniprot
Match: A0A7S1CEB7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CEB7_9STRA) HSP 1 Score: 103 bits (256), Expect = 1.510e-24 Identity = 62/139 (44.60%), Postives = 80/139 (57.55%), Query Frame = 1
Query: 1 VEGITQKTGSAKKFPVFVKMLLAALGHDSSGSGSVFVDLLTYADLELLKARRVGSTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKRYLILTYAAEYDRVHYPLPLAFVDSPQRQQLERTIDRLREDLSRR 417
VE +T+KTG+ K+FPVF+KML+AA+ +S SVF+DLLTYADLE+L+AR+ G T N+RYLILTYA E+DRVHYPL L + P L+RTI RLR +L+ R
Sbjct: 52 VEEVTRKTGNFKRFPVFLKMLVAAVNRESD---SVFIDLLTYADLEVLRARKEGHT---------------------AAHGSAASVSSVRHNNRRYLILTYAVEWDRVHYPLQLTEEEEPSTSSLQRTIKRLRRELATR 166
BLAST of mRNA_E-fasciculatus_F_contig15542.3858.1 vs. uniprot
Match: A0A397C4S8_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C4S8_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.690e-24 Identity = 70/164 (42.68%), Postives = 90/164 (54.88%), Query Frame = 1
Query: 1 VEGITQKTGSAKKFPVFVKMLLAALGHDSSGSGSVFVDLLTYADLELLKARRVG----STNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKRYLILTYAAEYDRVHYPLPLAFVDSPQRQQLERTIDRLREDLSRRSLETATPARNGSKNDRAAEAQ 480
+E +T+KTG+ K+F FV ML++AL H S SVF+DLLTY+DLEL + R++G STN NKRYLILTYA E+DRVHYPLPL FV++P L+RTI RL++ L LET T + +G N A Q
Sbjct: 6 IEELTKKTGNFKRFYTFVNMLMSALQHKSE---SVFIDLLTYSDLELYRKRKLGKSAPSTNLPDPVAALN--------------------------NKRYLILTYAVEFDRVHYPLPLNFVENPSPAMLQRTIRRLKQTL----LETRTSSIDGPANKTLASMQ 136
BLAST of mRNA_E-fasciculatus_F_contig15542.3858.1 vs. uniprot
Match: A0A150G4X0_GONPE (VFL3 protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G4X0_GONPE) HSP 1 Score: 107 bits (268), Expect = 1.730e-24 Identity = 66/150 (44.00%), Postives = 82/150 (54.67%), Query Frame = 1
Query: 1 VEGITQKTGSAKKFPVFVKMLLAALGHDSSGSGSVFVDLLTYADLELLKARRVGSTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKRYLILTYAAEYDRVHYPLPLAFVDSPQRQQLERTIDRLREDLSRRSLETATPARNG 450
+E IT KTG+ KKFPVFVKMLL+AL S SVFVDLLTY DLE+LK+R+ G NKRYLI+TYAAE+DRVHYPLPL + ++P Q L+R I +LR ++ E + R G
Sbjct: 50 IEDITAKTGNFKKFPVFVKMLLSAL---KQASESVFVDLLTYQDLEVLKSRKAGGQ--------------------------AAPPRTQAPNNKRYLIMTYAAEFDRVHYPLPLLYEENPDPQHLKRIISQLRSEVEALQAEAGSSRRGG 170
BLAST of mRNA_E-fasciculatus_F_contig15542.3858.1 vs. uniprot
Match: A0A8J4B621_9CHLO (Uncharacterized protein n=5 Tax=Volvox TaxID=3066 RepID=A0A8J4B621_9CHLO) HSP 1 Score: 108 bits (270), Expect = 1.870e-24 Identity = 68/151 (45.03%), Postives = 85/151 (56.29%), Query Frame = 1
Query: 1 VEGITQKTGSAKKFPVFVKMLLAALGHDSSGSGSVFVDLLTYADLELLKARRVGSTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKRYLILTYAAEYDRVHYPLPLAFVDSPQRQQLERTIDRLREDLSRRSLETATPARNGS 453
+E IT KTG+ KKFPVFVKMLL+AL S SVFVDLLTY DLE+LK+R+ G+ NKRYLI+TYAAE+DRVHYPLPL + ++P Q L+R I +LR ++ +E T R GS
Sbjct: 50 IEDITAKTGNFKKFPVFVKMLLSAL---KQASDSVFVDLLTYQDLEVLKSRKAGNQ--------------------------VAPQRANPPNNKRYLIMTYAAEFDRVHYPLPLLYEENPDPQHLKRVISQLRAEVEALQMEAGT--RRGS 169
BLAST of mRNA_E-fasciculatus_F_contig15542.3858.1 vs. uniprot
Match: A0A397C2A6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C2A6_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.940e-24 Identity = 70/164 (42.68%), Postives = 90/164 (54.88%), Query Frame = 1
Query: 1 VEGITQKTGSAKKFPVFVKMLLAALGHDSSGSGSVFVDLLTYADLELLKARRVG----STNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKRYLILTYAAEYDRVHYPLPLAFVDSPQRQQLERTIDRLREDLSRRSLETATPARNGSKNDRAAEAQ 480
+E +T+KTG+ K+F FV ML++AL H S SVF+DLLTY+DLEL + R++G STN NKRYLILTYA E+DRVHYPLPL FV++P L+RTI RL++ L LET T + +G N A Q
Sbjct: 6 IEELTKKTGNFKRFYTFVNMLMSALQHKSE---SVFIDLLTYSDLELYRKRKLGKSAPSTNLPDPVAALN--------------------------NKRYLILTYAVEFDRVHYPLPLNFVENPSPAMLQRTIRRLKQTL----LETRTSSIDGPANKTLASMQ 136
BLAST of mRNA_E-fasciculatus_F_contig15542.3858.1 vs. uniprot
Match: A0A397DWQ1_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DWQ1_9STRA) HSP 1 Score: 103 bits (258), Expect = 2.570e-24 Identity = 67/160 (41.88%), Postives = 88/160 (55.00%), Query Frame = 1
Query: 1 VEGITQKTGSAKKFPVFVKMLLAALGHDSSGSGSVFVDLLTYADLELLKARRVGSTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKRYLILTYAAEYDRVHYPLPLAFVDSPQRQQLERTIDRLREDLSRRSLETATPARNGSKNDRAAEAQ 480
+E +T+KTG+ K+F FV ML++AL H S SVF+DLLTY+DLEL + R++G + NKRYLILTYA E+DRVHYPLPL FV++P L+RTI RL++ L LET T + +G N A Q
Sbjct: 6 IEELTKKTGNFKRFYTFVNMLMSALQHKSE---SVFIDLLTYSDLELYRKRKLGKS----------------------APSPNLPDPVAALNNKRYLILTYAVEFDRVHYPLPLNFVETPSPAMLQRTIRRLKQTL----LETRTASIDGPANKTLASMQ 136
BLAST of mRNA_E-fasciculatus_F_contig15542.3858.1 vs. uniprot
Match: A0A061SME1_9CHLO (Coiled-coil domain-containing protein 61 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SME1_9CHLO) HSP 1 Score: 107 bits (266), Expect = 3.550e-24 Identity = 64/136 (47.06%), Postives = 80/136 (58.82%), Query Frame = 1
Query: 1 VEGITQKTGSAKKFPVFVKMLLAALGHDSSGSGSVFVDLLTYADLELLKARRVGSTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKRYLILTYAAEYDRVHYPLPLAFVDSPQRQQLERTIDRLREDL 408
+E IT KTG+ KK+PVFV+MLL+AL GS SVFVDLLTYADLE+LKAR+ + NKRYLILTYAAE+DRVH+PLPL + D+P + L++TI LR D+
Sbjct: 60 IEDITSKTGNFKKYPVFVRMLLSAL---KQGSDSVFVDLLTYADLEMLKARKEKANGASSQRPFPAN-------------------------NKRYLILTYAAEFDRVHFPLPLLYEDNPDPETLKKTISALRADV 167 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15542.3858.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15542.3858.1 >prot_E-fasciculatus_F_contig15542.3858.1 ID=prot_E-fasciculatus_F_contig15542.3858.1|Name=mRNA_E-fasciculatus_F_contig15542.3858.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=163bp VEGITQKTGSAKKFPVFVKMLLAALGHDSSGSGSVFVDLLTYADLELLKAback to top mRNA from alignment at E-fasciculatus_F_contig15542:40..2527- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15542.3858.1 ID=mRNA_E-fasciculatus_F_contig15542.3858.1|Name=mRNA_E-fasciculatus_F_contig15542.3858.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2488bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15542:40..2527- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15542:40..2527- >mRNA_E-fasciculatus_F_contig15542.3858.1 ID=mRNA_E-fasciculatus_F_contig15542.3858.1|Name=mRNA_E-fasciculatus_F_contig15542.3858.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=978bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15542:40..2527- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |