mRNA_E-fasciculatus_F_contig1551.3846.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1551.3846.1
Unique NamemRNA_E-fasciculatus_F_contig1551.3846.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1551.3846.1 vs. uniprot
Match: D7G717_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G717_ECTSI)

HSP 1 Score: 486 bits (1250), Expect = 1.470e-170
Identity = 250/259 (96.53%), Postives = 256/259 (98.84%), Query Frame = 1 
Query:    1 MVSTLARFTIYWCCVAASYVVILGIFKLATKEACDRDYGLFQILLATLGLAQLASMMSDHEDVMSPSMLEINYGIIATVAAAAVARCYLKFVRGVEPRSVNMSGKVVIITGSNTGVGYETAKALVNMGAHVIMACRSEEKALKAIENITFELEAAAKAIRHNADTGIKGKMTFMKLDLSSLAAVRVFVAEFKASKLGLDSLILNAGVMHGCRKVTEEGLEANLAVNYLGNFLLTTQLLPLLKQSPDGRVLCVNSSLHKK 777
            MVSTLARFTIYWCCVAASYVV+LG+FKLATKEA DRDYGLFQ+LLATLGLAQLASMMS+HEDVMSPSMLEINYGIIATVAAAAVARCYLKFVRGVEPRSVNMSGKVVIITGSNTGVGYETAKALVNMGAHVIMACRSEEKA KAIE+ITFELEAAAKAIRHN DTGIKGK+TFMKLDLSSLAAVRVFVAEFKASKLGLDSLILNAGVMHGCRKVTEEGLEANLAVNYLGNFLLTTQLLPLLKQSPDGRVLCVNSSLHKK
Sbjct:    1 MVSTLARFTIYWCCVAASYVVVLGMFKLATKEASDRDYGLFQLLLATLGLAQLASMMSNHEDVMSPSMLEINYGIIATVAAAAVARCYLKFVRGVEPRSVNMSGKVVIITGSNTGVGYETAKALVNMGAHVIMACRSEEKARKAIEDITFELEAAAKAIRHNTDTGIKGKLTFMKLDLSSLAAVRVFVAEFKASKLGLDSLILNAGVMHGCRKVTEEGLEANLAVNYLGNFLLTTQLLPLLKQSPDGRVLCVNSSLHKK 259
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BLAST of mRNA_E-fasciculatus_F_contig1551.3846.1 vs. uniprot
Match: A0A6H5J7F6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7F6_9PHAE)

HSP 1 Score: 242 bits (617), Expect = 1.550e-74
Identity = 124/132 (93.94%), Postives = 126/132 (95.45%), Query Frame = 1 
Query:  382 GAHVIMACRSEEKALKAIENITFELEAAAKAIRHNADTGIKGKMTFMKLDLSSLAAVRVFVAEFKASKLGLDSLILNAGVMHGCRKVTEEGLEANLAVNYLGNFLLTTQLLPLLKQSPDGRVLCVNSSLHKK 777
            G   + ACRSEEKA KAIENITFELEAAAKAIRHN DTGIKGK+TFMKLDLSSLAAVRVFVAEFKASKLGLDSLILNAGVMHGCRKVTEEGLEANLAVNYLGNFLLTTQLLPLLKQSPDGRVLCVNSSLHKK
Sbjct:  100 GHRTVGACRSEEKARKAIENITFELEAAAKAIRHNTDTGIKGKLTFMKLDLSSLAAVRVFVAEFKASKLGLDSLILNAGVMHGCRKVTEEGLEANLAVNYLGNFLLTTQLLPLLKQSPDGRVLCVNSSLHKK 231
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1551.3846.1 vs. uniprot
Match: A0A835YQM3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQM3_9STRA)

HSP 1 Score: 182 bits (463), Expect = 1.210e-51
Identity = 105/257 (40.86%), Postives = 159/257 (61.87%), Query Frame = 1 
Query:   10 TLARFTIYWCCVAASYVVILGIFKLATKEACDRDYGLFQILLATLGLAQLASMMSDHEDVMSPSMLEINYGIIATVAAAAVARCYLKFVRGVEPRSVNMSGKVVIITGSNTGVGYETAKALVNMGAHVIMACRSEEKALKAIENITFEL--EAAAKAIRHNADTGIKGKMTFMKLDLSSLAAVRVFVAEFKASKLGLDSLILNAGVMHGCRKVTEEGLEANLAVNYLGNFLLTTQLLPLLKQSPDGRVLCVNSSLHK 774
            TL +F ++   ++ +Y  I+ ++ +   E+   ++ L + +LA+ GL  +  +M      +    + +   ++   A  +    Y   + G  P  V+M GKVV++TG+N G+G ETAKAL+ MGAHVI+ACRSEE+A +AIE +T  L   AA +  R    T ++GK TFM LDL SL +VR F  E++  KL LD L+LNAGVM G R VTE+G E   AVN+L +FLL  +LLPL+++S +GR++ + S+LHK
Sbjct:   13 TLDKFCVFISMISCAYTTIVAVWSIGFGESELFNWRLIKHVLASCGLVNMTWLMFSSGTSLGMWRIPL-LSLMGMTAMLSGIMTYRTHIMGRAPEHVDMQGKVVVVTGANAGIGLETAKALMGMGAHVILACRSEERAKEAIETMTRGLLNVAALERPRGGVPT-LRGKATFMPLDLCSLKSVRNFATEYRKRKLPLDVLVLNAGVMMGRRTVTEDGFETTFAVNHLAHFLLARELLPLVERSAEGRIVILTSALHK 267
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BLAST of mRNA_E-fasciculatus_F_contig1551.3846.1 vs. uniprot
Match: W7U8G8_9STRA (Short-chain dehydrogenase n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7U8G8_9STRA)

HSP 1 Score: 147 bits (370), Expect = 2.380e-37
Identity = 98/247 (39.68%), Postives = 141/247 (57.09%), Query Frame = 1 
Query:   43 VAASYVVILGIFKLATKEACDRDYGLFQILLATLGLAQLASMM-SDHEDVMSPSMLEINYGIIATVAAAAVARCYLKFVRGVEPRSVNMSGKVVIITGSNTGVGYETAKALVNMGAHVIMACRSEEKALKAIENITFELEAAAKAIRHNADTGIKGKMTFMKLDLSSLAAVRVFVAEF--KASKLGLDSLILNAGVMHGCRKVTEEGLEANLAVNYLGNFLLTTQLLPLLKQSPDGRVLCVNSSLHK 774
            +A  Y V++G+++  T EA   +  L    LA   L  L   + + H+ +       +   ++    A  + R +  FV G   +SV++ GKV I+TG+NTG+G ET++ L  MGA VI+ACRS+++A +AI  I +E  +  K            ++ F  LD+SSL +V  F A F  KA   GLD LI NAGVM   R++T EGLEA LA N+ G+FLLT  L P L++  DGRV+ V+SSLHK
Sbjct:   29 IAFLYAVLVGLWRWCTYEARTAETYLRLAALAAAPLLPLCMFVFTSHKSLEGCKWHLLLAALLLGWDAYVLHRIWRNFVVGPRFQSVDLHGKVAIVTGANTGIGRETSRFLAEMGAKVILACRSKDRAEEAIRAILWESGSKIKP----------SQLEFWPLDVSSLQSVGDFAAAFQEKAGHKGLDILINNAGVMLNERRLTSEGLEATLATNHFGHFLLTLLLFPELEKVSDGRVVNVSSSLHK 265
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BLAST of mRNA_E-fasciculatus_F_contig1551.3846.1 vs. uniprot
Match: A0A8J6C6S1_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C6S1_DIALT)

HSP 1 Score: 135 bits (341), Expect = 4.270e-34
Identity = 85/187 (45.45%), Postives = 112/187 (59.89%), Query Frame = 1 
Query:  220 GIIATVAAAAV--ARCYLKFVRGVEPRSVNMSGKVVIITGSNTGVGYETAKALVNMGAHVIMACRSEEKALKAIENITFELEAAAKAIRHNADTGIKGKMTFMKLDLSSLAAVRVFVAEFKASKLGLDSLILNAGVMHGCRKVTEEGLEANLAVNYLGNFLLTTQLLPLLKQSPDG-RVLCVNSSLH 771
            G + T+A   +  A  Y   V G  P   +M+GKV I+TGS++G+G  TA+ALV MGAHVI+ACRSE+KAL+A   I                   KGK  FM LDL+S A+VR F   F+A  L L  L+ NAGVM   R +T +G E  L  NYLG+FLLT  LLP LK++  G R++ ++SS+H
Sbjct:   56 GSLTTLALGMLLTAITYRFQVIGPVPEDEDMTGKVCIVTGSSSGIGQSTAEALVRMGAHVILACRSEKKALQARSEILARCPNG------------KGKAEFMPLDLASFASVRAFARAFEALGLPLHVLVNNAGVMQHERLLTADGYEMTLQANYLGHFLLTQLLLPALKRTNGGARIVNISSSMH 230
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BLAST of mRNA_E-fasciculatus_F_contig1551.3846.1 vs. uniprot
Match: A0A0W8D0L7_PHYNI (Serine/threonine-protein phosphatase 2A regulatory subunit psrA n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D0L7_PHYNI)

HSP 1 Score: 131 bits (329), Expect = 1.190e-33
Identity = 71/162 (43.83%), Postives = 100/162 (61.73%), Query Frame = 1 
Query:  292 RSVNMSGKVVIITGSNTGVGYETAKALVNMGAHVIMACRSEEKALKAIENITFELEAAAKAIRHNADTGIKGKMTFMKLDLSSLAAVRVFVAEFKASKLGLDSLILNAGVMHGCRKVTEEGLEANLAVNYLGNFLLTTQLLPLLKQSPDGRVLCVNSSLHKK 777
            R  +  GKV ++TGSN+G+GYETA  L   GAHV++ACRSEE+  +A  ++   L +  +A          GK+TF KLDL  L +V+ F  +FK S   LD LI NAG+M G   ++ +G E   A N+LG+F LT QL PLLK S   R++ V+S +H++
Sbjct:    9 RIPSQEGKVAVVTGSNSGIGYETALELARKGAHVVLACRSEERGREAERSLRETLSSTPEA----------GKVTFAKLDLGDLNSVKKFSEDFKKSHRRLDLLINNAGIMGGAWGLSADGHERQFATNHLGHFALTAQLFPLLKLSTPSRIVNVSSFMHRQ 160
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1551.3846.1 vs. uniprot
Match: A0A7S2PRA5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PRA5_9STRA)

HSP 1 Score: 133 bits (334), Expect = 1.630e-33
Identity = 85/211 (40.28%), Postives = 129/211 (61.14%), Query Frame = 1 
Query:  193 SPSMLEINYGIIATVAAAAVARC---YLKFVRGVEPR-SVN-MSGKVVIITGSNTGVGYETAKALVNMGAHVIMACRSEEKALKAIENITFELEAAAKAIRHNADTG---------IKGKMTFMKLDLSSLAAVRVFVAEFKASKLGLDSLILNAGVMHGCRKVTEEGLEANLAVNYLGNFLLTTQLLPLLKQ----SPDGRVLCVNSSLH 771
            S  ML ++Y +IA +   ++A     YL ++ G +P+ S N M+G+VV+ITGSN G+G ETA+ L+  GA VI ACR+ EKA +AI+ I  ++ +      + ++ G         ++ +M F+KLDLS L +VR  V +F++  + L  LI NAGVM G R++T+   E  +  N+LG+FLLT  LLP L++    S D RV+ V+SS H
Sbjct:    4 SHEMLPMSYAVIAIIDIISIASLRYLYLVYIEGPKPKLSRNAMAGRVVLITGSNAGIGLETARQLLYAGATVIFACRNAEKAKEAIDGIYDDINSGEDG-SNGSENGTQHLVRPKPLRERMLFLKLDLSDLESVRSAVCKFESMNMKLHILINNAGVMMGDRRMTKNNHELMMQANHLGHFLLTILLLPKLREAADESGDARVITVSSSTH 213
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BLAST of mRNA_E-fasciculatus_F_contig1551.3846.1 vs. uniprot
Match: A0A813HIG6_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HIG6_POLGL)

HSP 1 Score: 131 bits (329), Expect = 3.570e-33
Identity = 93/238 (39.08%), Postives = 132/238 (55.46%), Query Frame = 1 
Query:   40 CVAASYVVILGIFKLATKEACDRDYGLFQILLATLGL----AQLASMMSDHEDVMSPSMLEINYGIIATVAAAAVARCYLK-FVRGVEPRSV--NMSGKVVIITGSNTGVGYETAKALVNMGAHVIMACRSEEKALKAIENITFELEAAAKAIRHNADTGIKGKMTFMKLDLSSLAAVRVFVAEFKASKLGLDSLILNAGVMHGCRKVTEEGLEANLAVNYLGNFLLTTQLLPLLKQS 732
            C AA Y+V+L   ++  +E  + D  +  +L + L L    A L  ++        P M    +  +A ++ AAV+ C  +  VRG  P     +M G+V I+TG NTG+GYETA+AL      VI ACRSE+KA  AI  +  +  AA K +        K ++ F+ LDL+SL +VR FV     S L +  LILNAGVM G R VT++GLE  LA N+ G+FLL   LLP L+++
Sbjct:   60 CAAALYLVVLYCLQVKFQEWPEFDARVSLLLFSALALFAGPAALELLLG------RPCMFPSWWPWVAGLSCAAVSVCAWRVMVRGPCPTVAPGSMKGRVSIVTGCNTGIGYETAQALAEADGTVIFACRSEDKARAAIARMMEDSRAAGKELS-------KDQLLFLPLDLASLESVRGFVDAVDRSGLEVHLLILNAGVMLGSRSVTKDGLEGTLAANHFGHFLLALLLLPKLQEA 284
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1551.3846.1 vs. uniprot
Match: A0A813KB87_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KB87_POLGL)

HSP 1 Score: 134 bits (336), Expect = 5.120e-33
Identity = 93/238 (39.08%), Postives = 133/238 (55.88%), Query Frame = 1 
Query:   40 CVAASYVVILGIFKLATKEACDRDYGLFQILLATLGL----AQLASMMSDHEDVMSPSMLEINYGIIATVAAAAVARCYLK-FVRGVEPRSV--NMSGKVVIITGSNTGVGYETAKALVNMGAHVIMACRSEEKALKAIENITFELEAAAKAIRHNADTGIKGKMTFMKLDLSSLAAVRVFVAEFKASKLGLDSLILNAGVMHGCRKVTEEGLEANLAVNYLGNFLLTTQLLPLLKQS 732
            C AA Y+V+L   ++  +E  + D  +  +L + L L    A L  ++        P M    +  +A ++ AAV+ C  +  VRG  P     +M G+V I+TG NTG+GYETA+AL      VI ACRSE+KA  AI  +  +  AA K +  +       ++ F+ LDL+SL +VR FV     SKL +  LILNAGVM G R VT++GLE  LA N+ G+FLL   LLP L+++
Sbjct:   17 CAAALYLVVLYCLQVKFQEWPEFDARVSLLLFSALALFAGPAALELLLG------RPCMFPSWWPWVAGLSCAAVSVCAWRVMVRGPYPTVAPGSMKGRVSIVTGCNTGIGYETAQALAEADGTVIFACRSEDKARAAIARMMEDSRAAGKELSED-------QLLFLPLDLASLESVRGFVDAVHRSKLEVHLLILNAGVMLGSRSVTKDGLEGTLAANHFGHFLLALLLLPTLQEA 241
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1551.3846.1 vs. uniprot
Match: T0RSF1_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0RSF1_SAPDV)

HSP 1 Score: 132 bits (333), Expect = 6.550e-33
Identity = 89/245 (36.33%), Postives = 128/245 (52.24%), Query Frame = 1 
Query:   43 VAASYVVILGIFKLATKEA-CDRDYGLFQILLATLGLAQLASMMSDHEDVMSPSMLEINYGIIATVAAAAVARCYLKFVRGVEPRSVNMSGKVVIITGSNTGVGYETAKALVNMGAHVIMACRSEEKALKAIENITFELEAAAKAIRHNADTGIKGKMTFMKLDLSSLAAVRVFVAEFKASKLGLDSLILNAGVMHGCRKVTEEGLEANLAVNYLGNFLLTTQLLPLLKQSPDGRVLCVNSSLHK 774
            V A+YV++L +F+    +      Y L   L+A   L  +        D       E  YG+        ++  Y+  ++G      +++ KV I+TG+N G+G E A+ L  MGAHVI ACRS+E+A  A++ +              A T    K+ FM LD+ SLA+VR F  +F  SK  LD L+ NAGV H  R+ T +G EA L +N+LG FLLT  LLP L ++ DGRV+ V S + K
Sbjct:    8 VGATYVLVLLLFRAPMSDIPWTHTYVLRYSLVAIASLLLIHGAFGTISD-------EYYYGLELFTVFNTIS-AYIMILQGKAYLDEDLTEKVAIVTGANAGIGLEIARQLAQMGAHVIFACRSKERAEDAMKQV--------------AATTSSSKLEFMALDVGSLASVRAFADDFLKSKRTLDILVNNAGVNHYRRQETVDGFEAMLGINFLGPFLLTNLLLPALLRADDGRVVNVGSCVMK 230
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1551.3846.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G717_ECTSI1.470e-17096.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J7F6_9PHAE1.550e-7493.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YQM3_9STRA1.210e-5140.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7U8G8_9STRA2.380e-3739.68Short-chain dehydrogenase n=4 Tax=Monodopsidaceae ... [more]
A0A8J6C6S1_DIALT4.270e-3445.45Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A0W8D0L7_PHYNI1.190e-3343.83Serine/threonine-protein phosphatase 2A regulatory... [more]
A0A7S2PRA5_9STRA1.630e-3340.28Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A813HIG6_POLGL3.570e-3339.08Hypothetical protein (Fragment) n=1 Tax=Polarella ... [more]
A0A813KB87_POLGL5.120e-3339.08Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
T0RSF1_SAPDV6.550e-3336.33Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1551contigE-fasciculatus_F_contig1551:12356..17125 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score483.4
Seed ortholog evalue6.6e-134
Seed eggNOG ortholog2880.D7G717
EggNOG free text desc.oxidation-reduction process
EggNOG OGsCOG1028@1,KOG1208@2759
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal anchor
Ec32 ortholog descriptionNAD(P)-binding domain
Ec32 orthologEc-01_011420.1
Exons7
Model size777
Cds size777
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928027.0035877-CDS-E-fasciculatus_F_contig1551:12355..124811622928027.0035877-CDS-E-fasciculatus_F_contig1551:12355..12481Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1551 12356..12481 +
1695995794.1721027-CDS-E-fasciculatus_F_contig1551:12355..124811695995794.1721027-CDS-E-fasciculatus_F_contig1551:12355..12481Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1551 12356..12481 +
1622928027.01872-CDS-E-fasciculatus_F_contig1551:13409..134741622928027.01872-CDS-E-fasciculatus_F_contig1551:13409..13474Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1551 13410..13474 +
1695995794.1912324-CDS-E-fasciculatus_F_contig1551:13409..134741695995794.1912324-CDS-E-fasciculatus_F_contig1551:13409..13474Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1551 13410..13474 +
1622928027.0381684-CDS-E-fasciculatus_F_contig1551:13834..139581622928027.0381684-CDS-E-fasciculatus_F_contig1551:13834..13958Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1551 13835..13958 +
1695995794.2032697-CDS-E-fasciculatus_F_contig1551:13834..139581695995794.2032697-CDS-E-fasciculatus_F_contig1551:13834..13958Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1551 13835..13958 +
1622928027.0522814-CDS-E-fasciculatus_F_contig1551:14820..149051622928027.0522814-CDS-E-fasciculatus_F_contig1551:14820..14905Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1551 14821..14905 +
1695995794.211602-CDS-E-fasciculatus_F_contig1551:14820..149051695995794.211602-CDS-E-fasciculatus_F_contig1551:14820..14905Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1551 14821..14905 +
1622928027.0689425-CDS-E-fasciculatus_F_contig1551:15483..155931622928027.0689425-CDS-E-fasciculatus_F_contig1551:15483..15593Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1551 15484..15593 +
1695995794.2224212-CDS-E-fasciculatus_F_contig1551:15483..155931695995794.2224212-CDS-E-fasciculatus_F_contig1551:15483..15593Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1551 15484..15593 +
1622928027.1078546-CDS-E-fasciculatus_F_contig1551:16211..163311622928027.1078546-CDS-E-fasciculatus_F_contig1551:16211..16331Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1551 16212..16331 +
1695995794.2307906-CDS-E-fasciculatus_F_contig1551:16211..163311695995794.2307906-CDS-E-fasciculatus_F_contig1551:16211..16331Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1551 16212..16331 +
1622928027.1232328-CDS-E-fasciculatus_F_contig1551:16978..171251622928027.1232328-CDS-E-fasciculatus_F_contig1551:16978..17125Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1551 16979..17125 +
1695995794.2393935-CDS-E-fasciculatus_F_contig1551:16978..171251695995794.2393935-CDS-E-fasciculatus_F_contig1551:16978..17125Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1551 16979..17125 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1551.3846.1prot_E-fasciculatus_F_contig1551.3846.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1551 12356..17125 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1551.3846.1

>prot_E-fasciculatus_F_contig1551.3846.1 ID=prot_E-fasciculatus_F_contig1551.3846.1|Name=mRNA_E-fasciculatus_F_contig1551.3846.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=259bp
MVSTLARFTIYWCCVAASYVVILGIFKLATKEACDRDYGLFQILLATLGL
AQLASMMSDHEDVMSPSMLEINYGIIATVAAAAVARCYLKFVRGVEPRSV
NMSGKVVIITGSNTGVGYETAKALVNMGAHVIMACRSEEKALKAIENITF
ELEAAAKAIRHNADTGIKGKMTFMKLDLSSLAAVRVFVAEFKASKLGLDS
LILNAGVMHGCRKVTEEGLEANLAVNYLGNFLLTTQLLPLLKQSPDGRVL
CVNSSLHKK
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mRNA from alignment at E-fasciculatus_F_contig1551:12356..17125+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1551.3846.1 ID=mRNA_E-fasciculatus_F_contig1551.3846.1|Name=mRNA_E-fasciculatus_F_contig1551.3846.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4770bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1551:12356..17125+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGTTTCCACCTTGGCACGCTTCACCATATACTGGTGCTGCGTGGCGGC
ATCATACGTCGTTATTCTGGGCATATTCAAGCTGGCTACGAAGGAAGCGT
GCGACCGGGACTACGGGCTGTTTCAGGTGGGTATGTATCTCTGTCCTGTT
GCCTGAAAGTTCCACGTAGCTGCTGCTTTTTGCTTTGCTGCAACGCACGC
GACAAACTGCACGCCGCTGGTTCGGGTAGATCATCGCACATTCCCACCGG
TTGACGTTACCCAGAGCCAAGGCTAGCCCAGACACCAGCACGCGCGATGT
TTGTTTCGACGTTACCGAAGCAGTATGGACCAACCCAGACCCAATAACCC
AGACCCAATAACAGCAGAAGCCCGAGATGTTGGGTGTAGCATCGATCCGC
AGATTTCCTGGTTCCCAAATTAATGTTCCGATCGCGTACCTGCAGCAGTA
CACCAGTTACAGCAGTACCGCTAAAGCCGCTTGCCACATCAAACATAAAC
ACGCTTGATGCGGAGGCACCTCGCAAAAGATGGCGTACATCCTGCGAGGC
CCTCCTGCTGGTTGAACGCGTCGAATACCGCCACATTTCAAAGGGTTGTC
CGCGGAATGTGCGGTGCATGTTCGATGCTGAACGGTCCCGTGAGCAGTGA
TGGTGCGTCAAAGTGTAGCCTTTCTTTCCCTTTTCCAGAGAAGTCGTAGT
CTTGTGAGAGGACCTTCATTCGCCACCATTTGCATCCTCGATACAATAGC
TAATCAGTGACCTACGCTATAAAGATGTGCACCACACCTCGAGGACGACG
CATGCTATGCATACGAGGTGGGGCAGAGGAGCAGGCAGATAGACATAGAA
ATGCAAATTGTACCACGCACCGTATGCATACTTACACGACACTTTCCACC
GAAAATGGAGCATGCGAGCATGCCGTTAACCTCCGTTTCGATGTTTCGTT
CTAGACGCTAGGCACCGCTTACTGTAGCATCTCTCCATTGTTCTGTATCT
CCTATCCGTCTGACTCTCGCTGTGCCCCCCCCCCCCCTGTGTGCTGGTGT
GCAGATTCTCCTGGCTACTCTGGGGCTTGCCCAGCTGGCATCGATGATGA
GCGACCACGAGGACGTCATGTAAGTCTTAAACCACCTTGTTTGGCGCTTG
TTATAACATCGACGACGTATTGAAGTATCACACGGATCTGTAAAGTTGAT
ACTATTACTTCTGAAGTACAATATTGACGACGGAAAGAGTGGTCTCAGCC
ACAACAAGTGTATGAGGAATTCGCCGAGAAAATACCGCGGCACGATGTTG
TCGTGTTGTGGTTCGCGAGCTCGGCATTTTTGACAGGAAGCCACTACAAT
ACGACCTGGAATTCGACACGCCACCATCTCTTCGATAAGGGTGATATGTA
CCATGCGGCATTTCCCGACAATTTCGCTGTTGCTATTTTGGGCGCGCGCG
CGGGGGGGGGGTATGGTATGACGTCACAGGAGCCCGTCCATGCTGGAGAT
CAACTACGGCATCATCGCCACAGTGGCGGCAGCCGCGGTGGCGCGCTGCT
ACCTCAAGTTCGTCAGGGGCGTCGAGCCTCGAAGCGTCAACATGTCGGGG
AAGGTAGGTGTGTGCAGTCCCCGGCGAGAGATCCCAAGGGTTTTTGCTCA
TGGTTGTCGTCGCAGCTAGCTGTTTTGGGTGATTTAGGCTGTAGCGGTAC
AGTAGCAGCAGCGACACGCGGCAGCTGTGTTGGAACCATCGTGGGGTAGA
TGCACAACAAGGAGGGATGAGCGACTCCATCCTGGCAGGGTGTTGCGTGT
TTTCGATGCTGGTGTCGATGGCATGCACGATGTCCCGCGTGCTGCTGATG
TGGCTTTTTGGAGCGGACACGGTAGGACACGTTCGGTGCAACACTACAGA
GCCTCGCAGCAGCGCAACAACCCCTCTTCTTTGCACGCGGTGTGGTGCGG
GGTGCACACGTGTGCACCACGTGCGTACCTTACATATATTTTGCATCTGC
CCGGGAAACGCCCGCGTCTTTTTGGGAGTCGGGCATCAAATGGTAGGCGT
TTAGCCCTACTCGTTGTTGCGGCGCTCGTCGAGGGCAGTACATGTCCTTC
CTCATATTTTTTTTGCAAGACTCCACGAGGGACGGGGGGGGAGCCTAGCA
GACAGCCGCCTGCCTAGCTGAAGGCTCGCGTCGTATGTTGTTAAATCACA
GCTGCTGCTGCTGCTGCTGCTGCTAAGCTTGAAAGCCTCACCAAACCACG
ATGCACCATTTCCTCCGACGTTTCCCCCTCGGCATGTCGCCAACCACCTG
CTGGCTCACTTGGTGTGCTGCCATATCTTGCATCGGCGTTTGCAGAGTCG
TCCTATTGATTTTTTAGCCATAACTGTACGCTCTTTGTTCCTCAGCCTAT
GATCAACAACCTCTGGCGTGATGCTTGACTGCTGTGTCTTGGCTCCGGAT
GGTGCAATGGTGCAGGTGGTCATTATCACCGGGAGCAACACCGGTGTGGG
GTACGAGACGGCCAAGGCCCTCGTAAACATGGGGGCGCACGTTATCATGG
GTGAGAAGACATGTCATGGATATGAGGGTTATCATGGGTAAGAAGACAAG
ACAACTGGTCGGCATTGGGAACTAAACAGTGTCTATTATTTTCAGTCAGA
GCGGTGATGTGGGTGGCCTGCAACAGGCACACATACAACGTGCTTCGTTT
TTGTTGGCTTGTGGATGAGTGCAGATACTGGAGTCAATGCTCATCATGAC
CACGTTTAGCGTCTTACGATGTTTACCGGTGCCGTGGTCGTTGCTCGAGC
GCTGCGAGCGTACTCCGCGTACGCGCACACTGGTGGCAACTACTGCCATG
AAGTATAACCCGCATGCATCATCCAATGAACGACCAGAGCGTCTAGGTCT
TGGGGGCTCTTCCAATACTCCCGGAGGGAGATGGGAATTGTGTTGCGTTT
GGAAGGTTGCAGAGATCTATGGTACGTGGAAGAAGTATTTGGTTTCAGTC
CTTCGTACGACTGACTGCTGAAGCTGCGACCCCAGCTCCTGTCTTGTGAT
ATGTATTTTTGTCACGCATAAATCTCGTGGAATTGTGTGTTTGTGTGTGT
GTGTTTTCCGCTTGTGTGCCTCTGTCAGCTTGCCGCTCGGAGGAGAAGGC
CCTAAAGGCAATCGAGAACATCACTTTCGAGCTCGAGGCTGCCGCTAAGG
CCATCCGCCACAACGCAGACACGGGCATCAAGGGCAAGGTGAGAACAGCG
CCGTTGTAATTTCTGGCACGTATTGTGCCTAGTACACTGTTACAGGTCTT
GCCGGCTATAAACGTTTTTTCATATGCATATTTCGTGTCAGAACTTCCCT
GTTCTGCCAGATTTCTGCATCTCACCGAGTTTTATCCAACTACACCATGC
TCTCGTAATGTTGACCGATGTTGTTTCCACGGACCAATGAGATCTCTCTC
TCAGATTTCTCGGTCGTGAAACTGGAACTCAACCCCTTTCCCCGTCCTGT
CGTATGAGAGTTATGCTAGGGGCATGCATCAAATGACCTTAATTTTGTGT
CCCTTCCCATGCGCCAGTACAGCAGTAGCGTGGTCTTCACTTCACCGCCC
TCCTCGACCATCACATGGCCTTTCACGAGACCCTGTAGATACCTCTCTAC
ATTTCGGTATTTCGAGATAGAGACGATCCCTTTCCTTGCCAGTTTTGCAC
TTGAAAAAGTACATGCGAACTTCTTTCGCCGGCCCGACGCCCCTCCTGAC
ACTAACCCAGTCCTCGTCGTCGAGCACCCTTGGTTTGATGCAAACACTTG
ATACAAACACGCTGCCTGGCCTTTTTGGAAACGTGGTGGCGCAATGGCCC
AATCAGATGACCTTCATGAAGCTGGACCTGTCGTCGCTCGCGGCAGTGAG
GGTGTTCGTCGCCGAGTTCAAGGCGTCGAAGCTCGGCCTAGACTCGCTAA
TCCTCAACGCGGGCGTCATGCACGGCGTAAGTCTTCGGCGTGTGGGGAAA
GCTCGATTTTTGTAGGAGTAGTTGTTTATGTTGGCTGTCCTTGTTGTCTG
TGACCAGAAGTGGGCAGTGGGTAAGCATGCCTGTTCGTGTGGAATACCTG
GGTGTGACTGCTGTGGCCGTCCCTCGTCTGTGTTAATCCTCTCTCGGGGT
TTATGTTGACTATGCATACGTGTTCGAATAGGTGGCACGTGCACTTCCGT
GTAGCAGAATCGTGATGCCCCCCTCCGATTGCTCATGCTCTGGTTTTTGC
CGCGTTGGTCCACGGTTTTCCTAGGCTGCATCGTTGTTTTCGAGGGCATG
TATTTTTCGTTCCCGTCAAGTACCTTGGTGGTACTGTACGGCCTGACTGG
AAGCTGGCGTATGTAACCGCTAGTCATCCCCCTTGGACTTTGTGATGCCC
CACAAATTCGTGTACAGCAGTGTCGGTTGCACATGTCCCAGTCCATGTTA
CGACAGAGTCTCTTTCCTTGCTTCATCCATACAAACAAATACCCCGGCCT
CGTCTGCTGCCATACATATTTGCACCCACTGAGCAAGTACACCTTGCCCC
CCTCTCCTACCTAAGACCCTCCCCCCCCCCCCGCCGCGTAATCTGTGCTT
TCGGTGTGGTGATGATATGACAGTGCCGAAAGGTGACCGAGGAGGGCCTG
GAGGCCAACCTCGCCGTCAATTACCTGGGCAACTTCCTTCTCACGACGCA
GCTGCTGCCCCTCCTCAAGCAGTCCCCGGACGGCCGAGTTCTGTGCGTCA
ACTCGAGCCTGCACAAGAAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1551:12356..17125+

>mRNA_E-fasciculatus_F_contig1551.3846.1 ID=mRNA_E-fasciculatus_F_contig1551.3846.1|Name=mRNA_E-fasciculatus_F_contig1551.3846.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1554bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1551:12356..17125+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGTTTCCACCTTGGCACGCTTCACCATATACTGGTGCTGCGTGGCGGC
ATCATACGTCGTTATTCTGGGCATATTCAAGCTGGCTACGAAGGAAGCGT
GCGACCGGGACTACGGGCTGTTTCAGATGGTTTCCACCTTGGCACGCTTC
ACCATATACTGGTGCTGCGTGGCGGCATCATACGTCGTTATTCTGGGCAT
ATTCAAGCTGGCTACGAAGGAAGCGTGCGACCGGGACTACGGGCTGTTTC
AGATTCTCCTGGCTACTCTGGGGCTTGCCCAGCTGGCATCGATGATGAGC
GACCACGAGGACGTCATATTCTCCTGGCTACTCTGGGGCTTGCCCAGCTG
GCATCGATGATGAGCGACCACGAGGACGTCATGAGCCCGTCCATGCTGGA
GATCAACTACGGCATCATCGCCACAGTGGCGGCAGCCGCGGTGGCGCGCT
GCTACCTCAAGTTCGTCAGGGGCGTCGAGCCTCGAAGCGTCAACATGTCG
GGGAAGGAGCCCGTCCATGCTGGAGATCAACTACGGCATCATCGCCACAG
TGGCGGCAGCCGCGGTGGCGCGCTGCTACCTCAAGTTCGTCAGGGGCGTC
GAGCCTCGAAGCGTCAACATGTCGGGGAAGGTGGTCATTATCACCGGGAG
CAACACCGGTGTGGGGTACGAGACGGCCAAGGCCCTCGTAAACATGGGGG
CGCACGTTATCATGGGTGGTCATTATCACCGGGAGCAACACCGGTGTGGG
GTACGAGACGGCCAAGGCCCTCGTAAACATGGGGGCGCACGTTATCATGG
CTTGCCGCTCGGAGGAGAAGGCCCTAAAGGCAATCGAGAACATCACTTTC
GAGCTCGAGGCTGCCGCTAAGGCCATCCGCCACAACGCAGACACGGGCAT
CAAGGGCAAGCTTGCCGCTCGGAGGAGAAGGCCCTAAAGGCAATCGAGAA
CATCACTTTCGAGCTCGAGGCTGCCGCTAAGGCCATCCGCCACAACGCAG
ACACGGGCATCAAGGGCAAGATGACCTTCATGAAGCTGGACCTGTCGTCG
CTCGCGGCAGTGAGGGTGTTCGTCGCCGAGTTCAAGGCGTCGAAGCTCGG
CCTAGACTCGCTAATCCTCAACGCGGGCGTCATGCACGGCATGACCTTCA
TGAAGCTGGACCTGTCGTCGCTCGCGGCAGTGAGGGTGTTCGTCGCCGAG
TTCAAGGCGTCGAAGCTCGGCCTAGACTCGCTAATCCTCAACGCGGGCGT
CATGCACGGCTGCCGAAAGGTGACCGAGGAGGGCCTGGAGGCCAACCTCG
CCGTCAATTACCTGGGCAACTTCCTTCTCACGACGCAGCTGCTGCCCCTC
CTCAAGCAGTCCCCGGACGGCCGAGTTCTGTGCGTCAACTCGAGCCTGCA
CAAGAAGTGCCGAAAGGTGACCGAGGAGGGCCTGGAGGCCAACCTCGCCG
TCAATTACCTGGGCAACTTCCTTCTCACGACGCAGCTGCTGCCCCTCCTC
AAGCAGTCCCCGGACGGCCGAGTTCTGTGCGTCAACTCGAGCCTGCACAA
GAAG
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