mRNA_E-fasciculatus_F_contig1551.3845.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1551.3845.1
Unique NamemRNA_E-fasciculatus_F_contig1551.3845.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1551.3845.1 vs. uniprot
Match: D7G718_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G718_ECTSI)

HSP 1 Score: 421 bits (1083), Expect = 1.890e-145
Identity = 199/208 (95.67%), Postives = 203/208 (97.60%), Query Frame = 1 
Query:    1 MAKAGEGLFKRYIPKDIHEKIRNVLEFKPKDPNRGWQVPAAKAATPGLDSKNEYRTPAPNSQPQANVPVSDNPDLQYDIGYYKRDTRRAPRQIHSYVAPSLRMLADERVKALELISNELGPEDPAPSQGNKNPAVLKYDPTGLRSTMSATNKAWEESLKEYMPNHNVKPWWWHSDVDHVAEAQAKGLPPPPGRRMDWEAPKGSKVASW 624
            MAKAGEGLFK+YIPKDIHEKIRNVLEFKPKDPNRGWQVP AKAATPGL +KNEYRTPAPNSQPQANVPVSDNPDLQYDIGY+KRDTRRAPRQIHSYVAPSLRMLADERVKALELISNELGPEDPAPSQGNKNPAVLKYDPTGLRSTMSATN+AW ESLKEYMP HNVKPWWWHSDVDHVAEAQAKGLPPPPGRRMDWEAPK SKVASW
Sbjct:    1 MAKAGEGLFKKYIPKDIHEKIRNVLEFKPKDPNRGWQVPPAKAATPGLKAKNEYRTPAPNSQPQANVPVSDNPDLQYDIGYFKRDTRRAPRQIHSYVAPSLRMLADERVKALELISNELGPEDPAPSQGNKNPAVLKYDPTGLRSTMSATNEAWTESLKEYMPTHNVKPWWWHSDVDHVAEAQAKGLPPPPGRRMDWEAPKSSKVASW 208
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1551.3845.1 vs. uniprot
Match: W7TSB3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSB3_9STRA)

HSP 1 Score: 150 bits (378), Expect = 2.140e-39
Identity = 80/196 (40.82%), Postives = 112/196 (57.14%), Query Frame = 1 
Query:   37 IPKDIHEKIRNVLEFKPKDPNRGWQVPAAKAATPGLDSKNEYRTPAPNSQPQANVPVSDNPDLQYDIGYYKRDTRRAPRQIHSYVAPSLRMLADERVKALELISNELGPEDPAPSQGNKNPAVLKYDPTGLRSTMSATNKAWEESLKEYMPNHNVKPWWWHSDVDHVAEAQAKGLPPPPGRRMDWEAPKGSKVASW 624
            +PKD+  KIR+   F+P D N  +  P  + + PG++    YR PAP S+P+ NVP S++ D  YDI Y+  DTRR P ++ S+     R+   +  +  +L+           S GNKNPAVL YDPTGLRS MSATN+  E++L   MPNHNV+  W   +   V + +AKGLP PPG+R  +  P  +    W
Sbjct:   25 LPKDMQTKIRSWALFRPDDINDLYPFPRNRISYPGVERIKGYRYPAPGSRPKVNVPQSESDDKLYDIKYFDHDTRRRPAEVFSWSPDFKRVALPDSPEPAKLMG----------SPGNKNPAVLAYDPTGLRSAMSATNQELEKALDRAMPNHNVRYAWQGEEEQIVKDCEAKGLPVPPGKRAKFAVPAMATQRRW 210
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1551.3845.1 vs. uniprot
Match: A0A8K1C7T1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7T1_PYTOL)

HSP 1 Score: 120 bits (302), Expect = 1.350e-28
Identity = 74/198 (37.37%), Postives = 108/198 (54.55%), Query Frame = 1 
Query:   37 IPKDIHEKIRNVLEF-KPKDPNRGWQVPAAKAATPGLDSKNEYRTPAPNSQP-QANVPVSDNPDLQYDIGYYKRDTRRAPRQIHSYVAPSLRMLADERVKALELISNELGPEDPAPSQGNKNPAVLKYDPTGLRSTMSATNKAWEESLKEYMPNHNVKPWWWHSDVDHVAEAQAKGLPPPPGRRMDWEAPKGSKVASW 624
            +P  + +K+R +L F +    ++  Q+P A         + +YR P+P SQP  A+VP SD  +  Y+I YY RD RR P      + PSL  +  E  K  E +S          S GNKNPAVL YDPTG RS MS T++A ++ + + M  HNV+  W   + + + E +AKG+PP PGR  +W+ P  ++V  W
Sbjct:   16 LPPQLRQKLRELLVFTEATGSSQPGQIPTA---------EQKYRYPSPTSQPGSAHVPSSDGKERVYNIQYYTRDIRRMPFPTEVGMHPSLGYV--EPAKLPEGVSRG--------SPGNKNPAVLAYDPTGTRSAMSTTHEARDKLIIQNMSTHNVRMAWEAQEEEILKECEAKGIPPVPGRPFEWDMPDVARVNRW 194
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1551.3845.1 vs. uniprot
Match: A0A0P1AK58_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AK58_PLAHL)

HSP 1 Score: 110 bits (276), Expect = 7.440e-25
Identity = 73/202 (36.14%), Postives = 108/202 (53.47%), Query Frame = 1 
Query:   25 FKRYIPKDIHEKIRNVLEFKPKDPNRGWQVPAAKAATPGLDSKNEYRTPAPNSQPQAN-VPVSDNPDLQYDIGYYKRDTRRAPRQIHSYVAPSLRMLADERVKALELISNELGPEDPAPSQGNKNPAVLKYDPTGLRSTMSATNKAWEESLKEYMPNHNVKPWWWHSDVDHVAE-AQAKGLPPPPGRRMDWEAPKGSKVASW 624
            +++ +P ++  K+R +L F      +  Q+  + A + G      YR P+P+ Q +   VP SD+ D  Y+I YY RD RR P  I   + PSL +  ++RV        E+  +    S GNKNPAVL YDPTG RS MS T++A ++ +++++  HNV+  W     D + E   AK LPP PGR   W  P  S+V  W
Sbjct:   15 YQKLLPAELRNKLRKLLVFTEATGTK--QLNQSPAFSQG------YRYPSPDKQAEGVFVPSSDSKDSIYNINYYTRDIRRFPFPIEVGMHPSLPI--EKRV--------EIPADAKRGSPGNKNPAVLSYDPTGTRSAMSTTHEARDKLIQQHVSTHNVRFEWEGDAEDEILEDCIAKNLPPAPGRPFVWNFPSQSRVMRW 198
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1551.3845.1 vs. uniprot
Match: D0NT33_PHYIT (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=D0NT33_PHYIT)

HSP 1 Score: 110 bits (274), Expect = 1.430e-24
Identity = 70/202 (34.65%), Postives = 109/202 (53.96%), Query Frame = 1 
Query:   25 FKRYIPKDIHEKIRNVLEFKPKDPNRGWQVPAAKAATPGLDSKNEYRTPAPNSQPQA-NVPVSDNPDLQYDIGYYKRDTRRAPRQIHSYVAPSLRMLADERVKALELISNELGPEDPAPSQGNKNPAVLKYDPTGLRSTMSATNKAWEESLKEYMPNHNVK-PWWWHSDVDHVAEAQAKGLPPPPGRRMDWEAPKGSKVASW 624
            ++  +P ++  K+R +L F      +  QV  + A + G      YR P+P+ Q +  +VP SD+ D  Y+I YY RD RR P      + PS+ M  ++R         E+  +    S GNKNPAVL+YDPTG RS MS T++A ++ + ++   HNV+  W   ++ + + + +AK LPP PGR   W+ P  S+V  W
Sbjct:   15 YQNLLPAELRNKLRKMLVFTEATGTK--QVHQSPAVSQG------YRYPSPDKQAEGVSVPSSDSKDSIYNIQYYTRDIRRFPFPTEVGMHPSIPM--EKRA--------EIPADAKRGSPGNKNPAVLRYDPTGTRSAMSTTHEARDKLILQHASTHNVRFEWEGDAEKEILEDLEAKNLPPTPGRPFVWDFPAQSRVMRW 198
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1551.3845.1 vs. uniprot
Match: A0A225X2X0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X2X0_9STRA)

HSP 1 Score: 108 bits (271), Expect = 3.780e-24
Identity = 67/202 (33.17%), Postives = 107/202 (52.97%), Query Frame = 1 
Query:   25 FKRYIPKDIHEKIRNVLEFKPKDPNRGWQVPAAKAATPGLDSKNEYRTPAPNSQPQAN-VPVSDNPDLQYDIGYYKRDTRRAPRQIHSYVAPSLRMLADERVKALELISNELGPEDPAPSQGNKNPAVLKYDPTGLRSTMSATNKAWEESLKEYMPNHNVK-PWWWHSDVDHVAEAQAKGLPPPPGRRMDWEAPKGSKVASW 624
            +++ +P D+ +K+R +L F      +  QV  + A + G      YR P+P+ Q +   VP +++ D  Y+I YY RD RR P      + PS+ +     + A          +    S GNKNPAVL+YDPTG RS MS T++A ++ + ++   HNV+  W   ++ + + + +AK LPP PGR   W+ P  S+V  W
Sbjct:   15 YQKLLPADLRDKLRKMLVFTEATGTK--QVNQSPAVSQG------YRYPSPDKQAEGVFVPSNESKDSVYNIQYYTRDIRRFPFPTEVGMHPSIPVETPAEIPA----------DAKRGSPGNKNPAVLRYDPTGTRSAMSTTHEARDKLIMQHASTHNVRFEWEGEAEKEILEDLEAKSLPPTPGRPFVWDFPAQSRVMRW 198
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1551.3845.1 vs. uniprot
Match: A0A2R5G086_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G086_9STRA)

HSP 1 Score: 108 bits (271), Expect = 5.370e-24
Identity = 76/202 (37.62%), Postives = 104/202 (51.49%), Query Frame = 1 
Query:   43 KDIHEKIRNVLEFKPKDPNRGWQ--VPAAKAATPGLDSKNEYRTPAPNSQPQ-ANVPVSDNPDLQYDIGYYKRDTRR---APRQIHSYVAPSLRMLADERVKALELISNELGPEDP-APSQGNKNPAVLKYDPTGLRSTMSATNKAWEESLKEYMPNHNVKPWWWHSDVDHVAEAQAKGLPPPPGRRMDWEAP-KGSKVASW 624
            +++   +  V EF    PNR      P +K +  G      YR P+P +Q Q A  P+ +N +  YD  YY RDT R    P  IH+              KA +L   + G E P + S GNKNPAVL+YDP+G RS M++T +  +  LKE +P H    W    ++D VAEA+AKG+PPPPG+   W  P K  +  SW
Sbjct:   28 REMSSLVDKVKEFFMFAPNRSSYETFPDSKKSKIGKG----YRYPSPGTQSQGAFTPIKENDEDPYDTNYYTRDTARNMQEPLYIHND-------------KAAQLHLPKAGEEPPRSGSPGNKNPAVLRYDPSGTRSAMASTWEGLDSKLKENLPIHLPMAWSEWENIDVVAEAKAKGIPPPPGKPAPWTGPTKEVQEGSW 212
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1551.3845.1 vs. uniprot
Match: M4BYT1_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BYT1_HYAAE)

HSP 1 Score: 107 bits (267), Expect = 1.380e-23
Identity = 71/202 (35.15%), Postives = 107/202 (52.97%), Query Frame = 1 
Query:   25 FKRYIPKDIHEKIRNVLEFKPKDPNRGWQVPAAKAATPGLDSKNEYRTPAPNSQPQAN-VPVSDNPDLQYDIGYYKRDTRRAPRQIHSYVAPSLRMLADERVKALELISNELGPEDPAPSQGNKNPAVLKYDPTGLRSTMSATNKAWEESLKEYMPNHNVK-PWWWHSDVDHVAEAQAKGLPPPPGRRMDWEAPKGSKVASW 624
            +++ +P+ +  K+R VL F      +  QV  + A + G      YR P+P+ Q +   VP SD+ D  Y+I YY RD RR P  +   + PSL +  ++R         E+  +    S GNKNPAVL YDP+G R+ M+ T++A ++ L +++  HNV   W   ++ D V   +AK LPP PGR   W  P  S+V  W
Sbjct:   15 YQKLLPEALRNKLRKVLVFTEATGTK--QVNQSPAMSQG------YRYPSPDKQAEGVFVPTSDSKDSIYNIQYYTRDIRRLPFPLEVGMHPSLPV--EKRA--------EIPADAKRGSPGNKNPAVLSYDPSGTRAAMTTTHEARDKLLLQHVSTHNVHFEWEGDAEKDIVENNEAKNLPPTPGRPFVWNFPAQSRVMRW 198
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1551.3845.1 vs. uniprot
Match: W2QS79_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QS79_PHYPN)

HSP 1 Score: 108 bits (271), Expect = 1.630e-23
Identity = 69/202 (34.16%), Postives = 109/202 (53.96%), Query Frame = 1 
Query:   25 FKRYIPKDIHEKIRNVLEFKPKDPNRGWQVPAAKAATPGLDSKNEYRTPAPNSQPQA-NVPVSDNPDLQYDIGYYKRDTRRAPRQIHSYVAPSLRMLADERVKALELISNELGPEDPAPSQGNKNPAVLKYDPTGLRSTMSATNKAWEESLKEYMPNHNVK-PWWWHSDVDHVAEAQAKGLPPPPGRRMDWEAPKGSKVASW 624
            ++  +P ++  K+R +L F      +  QV  + A + G      YR P+P+ Q +  +VP SD+ +  Y+I YY RD RR P      + PS+ +  ++R         E+  +    S GNKNPAVL+YDPTG RS MS T++A ++ + ++   HNV+  W   ++ D + + +AK LPP PGR   W+ P  S+V  W
Sbjct:   77 YQNLLPAELRNKLRKMLVFTEATGTK--QVNQSPAVSQG------YRYPSPDKQAEGVSVPSSDSKESIYNIQYYTRDIRRFPFPTEVGMHPSIPV--EKRA--------EIPADAKRGSPGNKNPAVLRYDPTGTRSAMSTTHEARDKLILQHASTHNVRFEWEGDAEKDILEDLEAKNLPPTPGRPFVWDFPSQSRVMRW 260
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1551.3845.1 vs. uniprot
Match: A0A7S2CFD6_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CFD6_9STRA)

HSP 1 Score: 107 bits (267), Expect = 3.010e-23
Identity = 69/203 (33.99%), Postives = 100/203 (49.26%), Query Frame = 1 
Query:   22 LFKRYIPKDIHEKIRNVLEFKPKDPNRGWQVPAAKAATPGLDSKNEYRTPAPNSQPQANVPVSDNPDLQYDIGYYKRDTRRAPRQIHSYVAPSLRMLADERVKALELISNELGPEDPAPSQGNKN--PAVLKYDPTGLRSTMSATNKAWEESLKEYMPNHNVKPWWWHSDVDHVAEAQAKGLPPPPGRRMDWEAPKGSKVASW 624
            L ++ IP    E++++ + F+P D +   Q+  A   T  +     YR PAP SQ  A VP +++ D +YDI Y+ R+ RR   Q H          AD ++     +    G E P  S G     PAV  YDPTGLRS M+A ++   ++++ ++ NHNV P W     +  A    KGLPP PG   D      SK A+W
Sbjct:   31 LIRKVIPASTWEQMKDAVLFRPNDTHDLHQMWPANMTTEKVPRIKGYRYPAPGSQASARVPDTEDEDRRYDIKYFTRNVRR---QGHLDEKGRSTRFADRQIAQANALVVTDGDEPPIGSPGTHYTLPAVQAYDPTGLRSAMTANHEETYKAVQAHLANHNVMPAWKDRTDEIAALTTGKGLPPVPGYDFDDNIVPESKTAAW 230
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1551.3845.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G718_ECTSI1.890e-14595.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TSB3_9STRA2.140e-3940.82Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A8K1C7T1_PYTOL1.350e-2837.37Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0P1AK58_PLAHL7.440e-2536.14Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]
D0NT33_PHYIT1.430e-2434.65Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]
A0A225X2X0_9STRA3.780e-2433.17Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A2R5G086_9STRA5.370e-2437.62Uncharacterized protein n=1 Tax=Hondaea fermentalg... [more]
M4BYT1_HYAAE1.380e-2335.15Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
W2QS79_PHYPN1.630e-2334.16Uncharacterized protein n=8 Tax=Phytophthora paras... [more]
A0A7S2CFD6_9STRA3.010e-2333.99Hypothetical protein n=2 Tax=Florenciella parvula ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1551contigE-fasciculatus_F_contig1551:6610..11968 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score424.5
Seed ortholog evalue2.9e-116
Seed eggNOG ortholog2880.D7G718
EggNOG OGs2BKX4@1,2S1JI@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-01_011410.1
Exons6
Model size1304
Cds size627
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928026.8727276-UTR-E-fasciculatus_F_contig1551:6609..72861622928026.8727276-UTR-E-fasciculatus_F_contig1551:6609..7286Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1551 6610..7286 -
1695995794.0986218-UTR-E-fasciculatus_F_contig1551:6609..72861695995794.0986218-UTR-E-fasciculatus_F_contig1551:6609..7286Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1551 6610..7286 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928026.887914-CDS-E-fasciculatus_F_contig1551:7286..74361622928026.887914-CDS-E-fasciculatus_F_contig1551:7286..7436Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1551 7287..7436 -
1695995794.1090183-CDS-E-fasciculatus_F_contig1551:7286..74361695995794.1090183-CDS-E-fasciculatus_F_contig1551:7286..7436Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1551 7287..7436 -
1622928026.9024026-CDS-E-fasciculatus_F_contig1551:8521..86681622928026.9024026-CDS-E-fasciculatus_F_contig1551:8521..8668Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1551 8522..8668 -
1695995794.1190097-CDS-E-fasciculatus_F_contig1551:8521..86681695995794.1190097-CDS-E-fasciculatus_F_contig1551:8521..8668Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1551 8522..8668 -
1622928026.9165587-CDS-E-fasciculatus_F_contig1551:9369..94881622928026.9165587-CDS-E-fasciculatus_F_contig1551:9369..9488Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1551 9370..9488 -
1695995794.1295304-CDS-E-fasciculatus_F_contig1551:9369..94881695995794.1295304-CDS-E-fasciculatus_F_contig1551:9369..9488Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1551 9370..9488 -
1622928026.9314673-CDS-E-fasciculatus_F_contig1551:10161..102611622928026.9314673-CDS-E-fasciculatus_F_contig1551:10161..10261Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1551 10162..10261 -
1695995794.139348-CDS-E-fasciculatus_F_contig1551:10161..102611695995794.139348-CDS-E-fasciculatus_F_contig1551:10161..10261Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1551 10162..10261 -
1622928026.9475353-CDS-E-fasciculatus_F_contig1551:10714..107651622928026.9475353-CDS-E-fasciculatus_F_contig1551:10714..10765Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1551 10715..10765 -
1695995794.1491778-CDS-E-fasciculatus_F_contig1551:10714..107651695995794.1491778-CDS-E-fasciculatus_F_contig1551:10714..10765Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1551 10715..10765 -
1622928026.966343-CDS-E-fasciculatus_F_contig1551:11908..119681622928026.966343-CDS-E-fasciculatus_F_contig1551:11908..11968Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1551 11909..11968 -
1695995794.1597548-CDS-E-fasciculatus_F_contig1551:11908..119681695995794.1597548-CDS-E-fasciculatus_F_contig1551:11908..11968Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1551 11909..11968 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1551.3845.1prot_E-fasciculatus_F_contig1551.3845.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1551 7287..11968 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1551.3845.1

>prot_E-fasciculatus_F_contig1551.3845.1 ID=prot_E-fasciculatus_F_contig1551.3845.1|Name=mRNA_E-fasciculatus_F_contig1551.3845.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=209bp
MAKAGEGLFKRYIPKDIHEKIRNVLEFKPKDPNRGWQVPAAKAATPGLDS
KNEYRTPAPNSQPQANVPVSDNPDLQYDIGYYKRDTRRAPRQIHSYVAPS
LRMLADERVKALELISNELGPEDPAPSQGNKNPAVLKYDPTGLRSTMSAT
NKAWEESLKEYMPNHNVKPWWWHSDVDHVAEAQAKGLPPPPGRRMDWEAP
KGSKVASW*
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mRNA from alignment at E-fasciculatus_F_contig1551:6610..11968-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1551.3845.1 ID=mRNA_E-fasciculatus_F_contig1551.3845.1|Name=mRNA_E-fasciculatus_F_contig1551.3845.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5359bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1551:6610..11968- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGCGAAGGCGGGCGAAGGGCTGTTCAAGAGGTACATTCCCAAGGACAT
TCATGAGAAGGTGGGTTGGTTATGATGGGACCTCCCCTTCTGATGTGTTT
TGTCGATGACATGACGATTATGCGGCGGAACCTTGTCAATCGAGGCACGC
AACGCAACGACGCAGCCCACCCTGCTTGCTGCTTGCGCGTGGCAACCTAC
TTGTAGACATGCCAGCGTCACTCGTTGTGCATGAGCTACTGAAGACTTGA
GAGTCGAAGAGTATACGTATGTACGACGAGAAACGAAGTCGATGTATGTC
TGTTCCTCGATAGATCAACAAGAAGCTGCCTCCTTGTAGAAAGGCCTGAG
TTGGGACCTCACAGCAGTAGAGTATCTACTCCGTCATAACCCTTGGTGAG
AGCAGGGCGCGGGCAAGGGGGAAGGTCATCCGGTGCTTGCTTGGTTGTCG
GTACGACGCGGGCTGTCGTGTTGCTGTATGCGTTGCAAGGCTATTATCCG
CTGAAGGTTTTGCCAACGTCGCGTATCTGGAGGAGTACGGGAAGGACCGA
AGCATTGTCCGAAGGGCAGCGTGCAGACGCAGTAACTGCTGTCTACGATG
TATGTAGGTGGTTGCATGTTTATTACATCGTGACGGCGAGCGAGGTCTCC
TGTGGTGTGCACTCCTGTGGCTTGTTAGTGTTTGTTTGCGTTGCACATCT
GGATACATCAGTCTACGCTGTATGCAACAACACACAAGGCACGTTTGAGT
TTGATCCAGACTCGACGTCGCCCGCGCAAGTCTGGTCGTTGTGGTAATGA
GACCGCCGTCCTTGCCCACTCCACAAGTCTCACATGCCGCTATAATAGCC
GGCGTTTGTCGATTCTATGCCCTTCCTGTGACATGATCAAGACTACCCAA
TGTCAGGCCGCCCGCAAGAGAACCTTCATTGATCGACCTCGGCGGTTTGT
AAGCTCTACATCCGGCTGTGTCTGGAGAGCAAGAAGTACACCTCGTCATT
GTTCCAAGGTCGAAGGGGGGTGTTTCTGTTTGCTGCCTCTCACGTGTCAA
GCGACATCATGACGATTACTTCGTACATGGTTCACACACGATCTCTGACC
TTGAACTTTCCTTGGACATGCTACTGCTGCTGCTGCTGCTGCTGCTGCTG
CTGCTGCTGCTGCTTCTGCTGTTCCCTGTTGCTGCCGAAACCCTGGGTGT
TAGATTCGAAATGTCCTGGAGTTCAAGCCCAAGGACCCCAACCGAGGATG
GCAGGTAAGCTGCTATACTGCTGTATGCATACATGTACTGTAAACTCAAG
CACTCATCCTCCAACGCGAAAGTATGAACGGACAAAAGGATAGCGCCCGC
CTAGACAAGACAGTAGTCTTCTGCCACCAGTTGGTCTGTCGATCGGATCG
ATAGCTACAATATCTGGGTTGTGCGCGCAGGAGTCGGTGGACCTCTTGAC
CTCCGTTCCGCCCATCATACGGTACTCCCACCACCGTCTCTTTTCGTCGG
CCCTCGGCGCTGCACGGTATCTTGGCGCATGACTCGGTTCTCCGCCCATG
ACATCCAAATACTTGCGATCCAGCAAAAAAGAGAACGCCGGGAAAACCTG
AGCTCCACCGCACACCCTCGCTCCCCGGGCCCACCCCCTATATAGCTACG
AACCCTTCACCCGCCGCGCCCCACCGCCGCTCGTGTCGATGTGTTGTTTT
TTCGAAGGTACCTGCGGCGAAAGCTGCGACGCCGGGGCTAGACTCAAAGA
ACGAGTACCGCACGCCTGCACCCAACTCGCAGCCTCAGGCGAACGTACCG
GTGTCAGGTGAACGGCGCGGCAGTGGAGGGAGACGGGGACGGAGGGGGGG
AGTCGTCAGTTGGTAATTGGGTGATGAGATCATTGGCCTCGCATCCCGCT
GGAGCCTGTGTTGAGAAATTTTGGTCAGGAGGCTTGGGAGGGGGGCATGG
TCCAAAGACATGATTTCGAGAGGGGAGTGTTCGTGGTCCAGAATTGATGT
ACCAGCATGAGTCGCTCGTGTTGTAAGTCATGTTTGTTGTGGGGTGCGTG
TCACGGCAGCATTTGTCGGGGACTCCAGAAAAGGTCTGGTGCTTAAGAAA
CAAGTTAAATGGACTGTGCAAAAGTGTTCGGTTGGGTAAAAGCGCCAGTA
CCCGGATTGCACGTGTTGTCGACGGTTCGGAACATAGCTTTACACATGGT
TGTTGGAGGTTGGTTGAGCGTGGTGTTTGCCTACCCGACAAATGTACTCG
ATTATCCTATTCGAGTATTGACCCTGCCACAGCGCTCGTTGGAACACCCT
TGCTTCTTCACAAACGATCATGGTTCAAGCTGGGACTGCGATACCTCTCA
CTGCCAATATTCGAATGGTGTGACCCCTGCCCCCACCCTCTCAAATGCTT
ATCCCGGGTCTCTCTCGCCGCCGACCCGCTCGTGTTCACCCTCTTCCGTC
GGGGGTGATGGTGTGAATTGTGTCCTATAGACAACCCCGACCTTCAGTAC
GACATTGGGTACTACAAGAGGGACACCAGGAGGGCGCCGCGGCAGATACA
CTCTTACGTGGCTCCTTCTCTCAGGATGCTCGCGGATGAACGGGTCAAGG
TGGGTGCATATCGTAGGCGTGTGTTTGGACGAGGGGGTGGATGGAGGAAT
TGTACGGGAAGATGGCGGAAACAAGGGCGGGTTCGGGACCCCTCTCGTGC
GTTTACGGTACGGTGTCTGTCTGTCTGTGAAGTCTGGTGCCCATGTTTCT
CTCAAAATTCTGGTTGTACCTCCCTTGTCCCTCGCGTTTAACTAGATAGA
CAAAAATGGCGAGCTAAGACTTGGGGTGACGGGACGTTGCCCCATCGGCG
CGTTCTTGGCCTTCACGCCGCACCCTTGGTTCCACGCATATGTACGAGAA
GTAACACCGTTTTCCACCTGGCTCCGCAATCTCAAGCAGTCTCAAGCAGG
GGCGTGCTCTCCGAGCGTGAAATCGGCATGATAAGTTGTTTCTCTCACTT
CGGACAAATCTCTCAGTGGGTTATGAACTTCCTTTTCATCAACTGCATGG
GGTAGAAAATTATGACCCGAGGAAGGGCCTGTCAGACCAGGAGGGTGTCG
GAAAGAACACTCTCTTTTTAAGTCGGGGAAAGGAAGCAATATCGCCCTTA
TCGCCTCACGTGCGTTACTGCTGCATTCTGCTGCTTCCGCCCGACAATTT
TTTTTATCTTTGCCGTTTCGTGCTTGTTGATCTAGTTGAGGGCAAGATAA
TCCGTCGCTAGCCTTACAGTCACTCGCTTTTGTTGTCTTGTTTTCTCCAG
GCCCTCGAGCTCATCTCGAATGAGCTAGGACCTGAAGACCCGGCGCCATC
TCAGGGAAACAAGAACCCGGCCGTGCTCAAGTACGACCCCACAGGCCTTC
GTAGCACCATGTCGGCGACCAACAAGGCCTGGGAGGAATCACTTAAGGTT
CGTGCGTGTTTCGTGGTTGGTGGTGTGGGTGTCGTGTGACCGTACCCACC
ATGCTGTTGTACATGTAGATGTTAGCCTTTCTGTGGAAGTGACCTTTAAC
ACGTTAACAAGGATCCCACCGTCAACAAGGGTCCTACCCGTAGTAGGGGT
CTTACCCTTGAGAGGGGCCCTACCCTCACTTAACAATCTTACCCTTTTTA
GCGGTCTTACCCGATGTCCGTCGAGGAAGATTCCCTATTCCCTCTTCCTC
TGTTTTTCATATTGGCGTCGCGGTGAGACGTGCGGTTTTGGTGGAAGAGA
ATCCGGGTTCCAATCTCGCCACCCACGAAAGCAACGGTGGTAAATACCAA
CACTAGTAGTGGAGGACCGACGAACAACAGACACAGCAGTGTTGAAATTG
GACATTTTGATTACGTGATGGACGTAGCTCACCCGTGAGAGCATGCGTAG
GAGGTGCCGAAGAAGGGAATCGACTCTCCGGTCACCTTTTAAAACGCCTT
CTTGTCTAGTCAACAAGTATTTGAACAAGGTGACGATTATAGTCGTATCG
CAATTCTCCAACGTCCATCGAGGACAATTTCCTCATTTCACACTTCGGTA
CGTCTTGGAGAAGCTGCTGTTGTTACTGCTGGTGATGCTGGCATCGTGTC
TGTTGATTCTTTCATACACTCGAGTACATGATGTTGCCCTTGGTGACGAA
AGCGCTTTAGCCCTCTGGATTGTGTTGAGCGTGCGGGTACTAGAAAATCC
GCGTGTGGGCGAGCAAAGTATTGCAGCATGCAACAAGGCGCTCGGCTTGA
AGCTCCGACGATTTTGAAGCGTGTTTTGCATGGTTGAGAAAGCGCTTCTT
CTTTTTTTGACCTGTTGAGGCGATATCATATTGTGCAACTCTCTCTTCAA
ACATACTTTGCAGGCAAGCCGTTCTTCAGCTGTCTCTCCGTTCTTACCCC
CAAGACACACGCCTGCGTATTGTTTTCACGAAGGCGTCAAATTCTTTCGC
CCGTTAAATCAGACGCATATTTTTCATTTTTCCGAGACATTTGATAACTC
TATATCTTTCCTCGTTCGCCCCCCCCCACCAGGAGTACATGCCCAACCAC
AACGTCAAGCCGTGGTGGTGGCATTCCGACGTGGACCACGTCGCGGAGGC
GCAGGCGAAGGGACTGCCGCCCCCGCCGGGACGCCGCATGGACTGGGAGG
CACCGAAGGGCTCCAAGGTTGCCAGCTGGTAGAGGGAGAGATAACTAATA
GGACAGAAGCCGGGGCCTACCTGTGCTCGTGTCTGTTTTTTGTCTCGACA
GCAGTGTTTTTTGCTTGGAAGTGATGGGGTTGGTCACCACGCACCATCGT
TGGGTGCCGGGGTCTCGCGGGGGAGAGGAGGCGTGGATCTTGTTGGCGGC
GGAGGATACGGGTGGGTGGAAGGCTCGTTGGCACCAGGTCTACTCTAGCC
AGAGGGGTCTCGGGGAGAGAGGGCTGGCTGGTGCCGGTCCCGCTGGAGTG
CGCATCTGTTTCCATCGATGATAGAGGGAGCCTTGTCTTTGTTGGAAAAA
AGTGTCTCAATTTTCTTGTTGGGTTTCTTGAGCTTTGATGGCTTCTAGCT
GTTGAATAGCCAGGGCGGCGGAAGATTAACGGGGAAAAAAGAAGAGGTTA
CGGCAGTTGCAGCAGTTTTATTGTAGGTTACAGCATCGATGCATTTATTT
TTTTCACGCCGTTCCATGTGTTCGGGGCTTGATCGCTGTGACCCGAAGCT
GTCGCGCCGAGAACACGCTCTAATCATACGGCCACATTCAAACGCGATTC
CATGCTTTCATCCTGGTCCTAGCGGCGGTCTTGTTTATCCGATCTGTTCG
TGTTCTTGAACGATCTCTCCATCGTACCCACCCACCGAGTGCGTATCCTT
GCTCGTCAC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1551:6610..11968-

>mRNA_E-fasciculatus_F_contig1551.3845.1 ID=mRNA_E-fasciculatus_F_contig1551.3845.1|Name=mRNA_E-fasciculatus_F_contig1551.3845.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1254bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1551:6610..11968- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGCGAAGGCGGGCGAAGGGCTGTTCAAGAGGTACATTCCCAAGGACAT
TCATGAGAAGATGGCGAAGGCGGGCGAAGGGCTGTTCAAGAGGTACATTC
CCAAGGACATTCATGAGAAGATTCGAAATGTCCTGGAGTTCAAGCCCAAG
GACCCCAACCGAGGATGGCAGATTCGAAATGTCCTGGAGTTCAAGCCCAA
GGACCCCAACCGAGGATGGCAGGTACCTGCGGCGAAAGCTGCGACGCCGG
GGCTAGACTCAAAGAACGAGTACCGCACGCCTGCACCCAACTCGCAGCCT
CAGGCGAACGTACCGGTGTCAGGTACCTGCGGCGAAAGCTGCGACGCCGG
GGCTAGACTCAAAGAACGAGTACCGCACGCCTGCACCCAACTCGCAGCCT
CAGGCGAACGTACCGGTGTCAGACAACCCCGACCTTCAGTACGACATTGG
GTACTACAAGAGGGACACCAGGAGGGCGCCGCGGCAGATACACTCTTACG
TGGCTCCTTCTCTCAGGATGCTCGCGGATGAACGGGTCAAGACAACCCCG
ACCTTCAGTACGACATTGGGTACTACAAGAGGGACACCAGGAGGGCGCCG
CGGCAGATACACTCTTACGTGGCTCCTTCTCTCAGGATGCTCGCGGATGA
ACGGGTCAAGGCCCTCGAGCTCATCTCGAATGAGCTAGGACCTGAAGACC
CGGCGCCATCTCAGGGAAACAAGAACCCGGCCGTGCTCAAGTACGACCCC
ACAGGCCTTCGTAGCACCATGTCGGCGACCAACAAGGCCTGGGAGGAATC
ACTTAAGGCCCTCGAGCTCATCTCGAATGAGCTAGGACCTGAAGACCCGG
CGCCATCTCAGGGAAACAAGAACCCGGCCGTGCTCAAGTACGACCCCACA
GGCCTTCGTAGCACCATGTCGGCGACCAACAAGGCCTGGGAGGAATCACT
TAAGGAGTACATGCCCAACCACAACGTCAAGCCGTGGTGGTGGCATTCCG
ACGTGGACCACGTCGCGGAGGCGCAGGCGAAGGGACTGCCGCCCCCGCCG
GGACGCCGCATGGACTGGGAGGCACCGAAGGGCTCCAAGGTTGCCAGCTG
GTAGGAGTACATGCCCAACCACAACGTCAAGCCGTGGTGGTGGCATTCCG
ACGTGGACCACGTCGCGGAGGCGCAGGCGAAGGGACTGCCGCCCCCGCCG
GGACGCCGCATGGACTGGGAGGCACCGAAGGGCTCCAAGGTTGCCAGCTG
GTAG
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