mRNA_E-fasciculatus_F_contig15478.3831.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15478.3831.1 vs. uniprot
Match: D7G3J5_ECTSI (GDP-mannose 6-dehydrogenase n=6 Tax=Phaeophyceae TaxID=2870 RepID=D7G3J5_ECTSI) HSP 1 Score: 461 bits (1185), Expect = 2.510e-162 Identity = 228/237 (96.20%), Postives = 233/237 (98.31%), Query Frame = 1
Query: 1 MSSLASAASRSAATGRKESIIQVGCGVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMNTAGIPCCHPDKCPNDLNPEIVLLSVPTPLIKETQRLDMKYVWSTVPLVVKLINQSTGVAPIFVIRSTVPPGMTKKWMAAVKEKTDKPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVKARMANAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLAHELDP 711
MSSLA+AASRSAA+G+KESIIQVGCGVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMN AGIPCCHPD CPNDLNPEIVLLSVPTPLIKETQRLDMKYVWSTVPLVVKLI QSTG+APIFVIRSTVPPGMTKKWMAAVKEKTDKPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDV+ARM NAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLAHELDP
Sbjct: 1 MSSLATAASRSAASGKKESIIQVGCGVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMNAAGIPCCHPDNCPNDLNPEIVLLSVPTPLIKETQRLDMKYVWSTVPLVVKLIEQSTGIAPIFVIRSTVPPGMTKKWMAAVKEKTDKPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVRARMTNAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLAHELDP 237
BLAST of mRNA_E-fasciculatus_F_contig15478.3831.1 vs. uniprot
Match: D7FM80_ECTSI (GDP-mannose 6-dehydrogenase n=3 Tax=Phaeophyceae TaxID=2870 RepID=D7FM80_ECTSI) HSP 1 Score: 370 bits (950), Expect = 8.340e-127 Identity = 177/221 (80.09%), Postives = 196/221 (88.69%), Query Frame = 1
Query: 49 KESIIQVGCGVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMNTAGIPCCHPDKCPNDLNPEIVLLSVPTPLIKETQRLDMKYVWSTVPLVVKLINQSTGVAPIFVIRSTVPPGMTKKWMAAVKEKTDKPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVKARMANAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLAHELDP 711
KE+++Q+GCGVVGGAYAKAY HHGF + GFDVVPAII+KMN AG+ C HPD CP+DLN +IVLLSVPTPLIKETQRLDMKYVWST+PLVVKLI QS+G+ PI VIRSTVPPG T KW A V+ KTDKPF VAFQPEFLRAVSCEEDARAPWQ+VFG +D +ARM+N FL+FVGRDE+KLTVL IAEAEFMKLVHNYANGLKISFANCIYGLAHELDP
Sbjct: 4 KENVVQIGCGVVGGAYAKAYVHHGFSLTGFDVVPAIIDKMNDAGVKCFHPDDCPSDLNADIVLLSVPTPLIKETQRLDMKYVWSTIPLVVKLIEQSSGLTPILVIRSTVPPGTTLKWEAEVRAKTDKPFQVAFQPEFLRAVSCEEDARAPWQIVFGCAKDADDTRARMSNCFLDFVGRDENKLTVLTIAEAEFMKLVHNYANGLKISFANCIYGLAHELDP 224
BLAST of mRNA_E-fasciculatus_F_contig15478.3831.1 vs. uniprot
Match: A0A6H5KTU6_9PHAE (UDPG_MGDP_dh domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTU6_9PHAE) HSP 1 Score: 228 bits (581), Expect = 7.560e-72 Identity = 120/197 (60.91%), Postives = 132/197 (67.01%), Query Frame = 1
Query: 121 FEVRGFDVVPAIIEKMNTAGIPCCHPDKCPNDLNPEIVLLSVPTPLIKETQRLDMKYVWSTVPLVVKLINQSTGVAPIFVIRSTVPPGMTKKWMAAVKEKTDKPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVKARMANAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLAHELDP 711
+ + GFDVVPAII+KMN AG+ C HPD CP+DLN +IVLLSVPTPLIKETQRLDMK VAFQPEFLRAVSCEEDARAPWQ+VFG +D +ARM+N FL+FVGRDE+KLTVL IAEAEFMKLVHNYANGLKISFANCIYGLAHELDP
Sbjct: 4 YSLTGFDVVPAIIDKMNDAGVKCFHPDDCPSDLNADIVLLSVPTPLIKETQRLDMK--------------------------------------------------VAFQPEFLRAVSCEEDARAPWQIVFGCAKDADDTRARMSNCFLDFVGRDENKLTVLTIAEAEFMKLVHNYANGLKISFANCIYGLAHELDP 150
BLAST of mRNA_E-fasciculatus_F_contig15478.3831.1 vs. uniprot
Match: A0A3G4ZX75_9VIRU (GDP-mannose 6-dehydrogenase n=1 Tax=Edafosvirus sp. TaxID=2487765 RepID=A0A3G4ZX75_9VIRU) HSP 1 Score: 112 bits (281), Expect = 4.560e-26 Identity = 70/211 (33.18%), Postives = 116/211 (54.98%), Query Frame = 1
Query: 46 RKESIIQVGCGVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMNTAGIPCCHPDKCPNDLNPEIVLLSVPTPLIKETQRLDMKYVWSTVPLVVKLINQSTGVAPIFVIRSTVPPGMTKKWMAAVKEKTDKPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVKARMANAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFAN 678
+K + Q+G GVVGG++ +YK G +V G + ++EK D + + + + LS+ TPL + TQ+L++KY++S++P V ++ S + V+RSTVPP T + ++ +V FQPE+LRA S ++D+ AP ++ G G DV + + + +F+ R+ K+ + I EAE KL HN N KIS+ N
Sbjct: 19 KKFKVTQIGLGVVGGSFGLSYKKVGCDVVGIEASKELVEKFKKEFETYHISDDLSHVKDVDFIFLSINTPLDEATQKLNLKYLFSSIPNVCTIVKNSPKA--LVVVRSTVPPTTTNTYKKELEALCGFKVNVLFQPEYLRAYSAKKDSEAPLYIIIGRDEGT-DVSS-LIELYSKFIARE--KIEEMTIEEAELQKLFHNCFNATKISYFN 223
BLAST of mRNA_E-fasciculatus_F_contig15478.3831.1 vs. uniprot
Match: A0A814QHR5_9BILA (UDP-glucose 6-dehydrogenase n=4 Tax=Adineta steineri TaxID=433720 RepID=A0A814QHR5_9BILA) HSP 1 Score: 101 bits (251), Expect = 7.270e-22 Identity = 72/232 (31.03%), Postives = 119/232 (51.29%), Query Frame = 1
Query: 52 ESIIQVGCGVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMNTAGIPCCHPDKCP-----NDLNPEIVLLSVPTPLIKETQRLDMKYVWSTVPLVVKLINQSTGVAPIFVI-RSTVPPGMTKKWMAAVKE-KTDKP--FHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVKARMANAFLEFV----GRDESKLTVLNIAE-AEFMKLVHNYANGLKISFANCIYGLAHEL 705
++II +GCG+VG A + G + G D +M C PD+ ND+ +++L+++PTP T L + + ++ L+ LI + P+ +I +STV G ++K +K TD +H+ + PEFLRA + DA P + +FG G+ + LE + G S +T+++ +E AEF+KLVHN++N ++ISF+NC LA L
Sbjct: 2 KNIICIGCGIVGYATCLSLSSLGHSMVGIDTCMIARNRMINMNFSCFSPDEVMFEEKMNDILVDVILIALPTPFCSLTNTLSDESIMLSIGLISYLIKKKKDDNPVMIILQSTVSVGTSRKLFNGLKLFNTDDNCNYHLFYHPEFLRAEKSQYDALHPIKQIFGLTDGKPKMDLSYYENILEEIFSPIGSFRSSITMMSSSEEAEFLKLVHNFSNAMRISFSNCCAHLASLL 233
BLAST of mRNA_E-fasciculatus_F_contig15478.3831.1 vs. uniprot
Match: A0A0G0IL69_9BACT (UDP-glucose 6-dehydrogenase n=1 Tax=Parcubacteria group bacterium GW2011_GWD2_38_11 TaxID=1618941 RepID=A0A0G0IL69_9BACT) HSP 1 Score: 95.9 bits (237), Expect = 1.140e-19 Identity = 74/214 (34.58%), Postives = 105/214 (49.07%), Query Frame = 1
Query: 58 IIQVGCGVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMNTAGIPCCHPDKCPNDLNPEI--VLLSVPTPLIKETQRLDMKYVWSTVPLVVKLINQSTGVAPIFVIRSTVPPGMTKKWMAAVKEKTD-----KPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVKARMANAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFAN 678
I +G G+VG A K G V +D P II+ + G H + EI ++SVPTP + R+++ ++ + + K I + T PIFV+RSTVPPG T+ +V EK K F + PEFLR VS E+D PW VV G +D A +A A + + + + +++ EAE MK HN N KISF N
Sbjct: 9 IAIIGSGIVGQATGKGLARAGHNVLFYDKNPNIIKTLKNDGYHADHIENLSTVETDEIEIFMISVPTPT--KEGRVELSFLNEALTSLGKAIKE-TEKNPIFVVRSTVPPGTTENLAVSVLEKESGKKAGKDFGICMNPEFLREVSAEKDFMNPWMVVIGC----DDKSAGLALAKIYKIFK--CPIVHMSLKEAEMMKYAHNLLNATKISFFN 213
BLAST of mRNA_E-fasciculatus_F_contig15478.3831.1 vs. uniprot
Match: UPI00166F86CE (UDP-glucose/GDP-mannose dehydrogenase family protein n=1 Tax=Streptomyces ruber TaxID=83378 RepID=UPI00166F86CE) HSP 1 Score: 85.5 bits (210), Expect = 4.680e-16 Identity = 75/228 (32.89%), Postives = 104/228 (45.61%), Query Frame = 1
Query: 58 IIQVGCGVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMNTAGIPCCHPDKCPNDLNPE-IVLLSVPTPLIKETQRLDMKYVWSTVPLVVKLINQSTGVAPIFVIRSTVPPGMTKKWMAAVKEKTD-----KPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVKARMANAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFANCIY----GLAHELDP 711
I VG GVVG A K + H G EV D+ +E + + G+ D D P+ V L++PTP + R D+ V K + ++G + V+RSTVPPG T+ + + EK + FH+A PEFLRA S ED + PW V R++ F G T + A AE +K HN N KISF N ++ L +LDP
Sbjct: 4 IFIVGSGVVGTATGKGFLHAGHEVTFIDIAHRRLEYLRSQGLDAR--DTLDLDNEPDSFVFLTLPTPNVGH--RYDLSAFEDGTTTVGKALGTASG-THVVVVRSTVPPGTTEGLVQPLLEKHSGRTLGEDFHLASNPEFLRAASAVEDFKHPWMTVIASRSTR--TVERLSELLAPFGGELR---TFDDPAAAEMVKCAHNIFNATKISFWNEMWLVSQALGLDLDP 221
BLAST of mRNA_E-fasciculatus_F_contig15478.3831.1 vs. uniprot
Match: A0A7C6VMD1_9RHOO (UDP-glucose/GDP-mannose dehydrogenase family protein n=1 Tax=Rhodocyclaceae bacterium TaxID=1898103 RepID=A0A7C6VMD1_9RHOO) HSP 1 Score: 84.7 bits (208), Expect = 1.120e-15 Identity = 70/222 (31.53%), Postives = 108/222 (48.65%), Query Frame = 1
Query: 58 IIQVGCGVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMNTAGIPCCHPDKCPNDLNP-EIVLLSVPTPLIKETQRLDMKYVWSTVPLVVKLINQSTGVAPIFVIRSTVPPGMTKKWMAAVKEKTDKP-----FHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVKARMANAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLAHEL 705
I+ VG GVVG A K + G VR D+ P I K+ G+ D+ D N ++V+L+V TP + LD Y+ + V + + ++ + V+RSTVPP T++ + + E+ F VA PEFLRAVS E+D PW + G E+ K + + F + + EAE +K V+N N +KIS+ N +Y + +L
Sbjct: 4 IVVVGSGVVGQATGKGFAKKGHSVRYVDINPTTIAKLRAQGLNAMTADEV--DWNTVDLVMLAVSTPSVGGKIVLD--YIEAAALDVGRGLATTSNYITV-VVRSTVPPTSTEQRITPILEQASGKRAGVGFGVAMNPEFLRAVSNEQDFARPWITIIGTT--EQHTKDMLDELYKPF----GALIVHCTPTEAEMIKYVNNVYNAVKISYFNEVYAICQKL 214
BLAST of mRNA_E-fasciculatus_F_contig15478.3831.1 vs. uniprot
Match: UPI0019C89DED (UDP-glucose/GDP-mannose dehydrogenase family protein n=1 Tax=Roseiflexaceae bacterium TaxID=2762507 RepID=UPI0019C89DED) HSP 1 Score: 76.3 bits (186), Expect = 1.230e-12 Identity = 67/222 (30.18%), Postives = 107/222 (48.20%), Query Frame = 1
Query: 58 IIQVGCGVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMNTAGIPCCHPDKCPNDLNP-EIVLLSVPTPLIKETQRLDMKYVWSTVPLVVKLINQSTGVAPIFVIRSTVPPGMTKKWMAAVKEKTD-----KPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVKARMANAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLAHEL 705
I+ VG GVVG A K + G +V D+ P I ++ G+ D N ++V+L+V TP + LD Y+ + V + I + + V+RSTVPP T++ + + E+ + F VA PEFLRAV+ E+D PW + G + E A + + + G + + EAE +K V+N N +KIS+ N +Y + +L
Sbjct: 4 IVIVGSGVVGQATGKGFSKKGHKVSFVDINPQTIARLRGEGLDAMTAADV--DWNAVDLVMLAVSTPSVNAKIVLD--YIEAAAFDVGRGIASTDNYITV-VVRSTVPPTTTEQRITRILEQASGKRVGEGFGVAMNPEFLRAVTNEQDFARPWITILGTL---EQRTAEILDKLYKPFG---AMIVHCTPTEAETIKYVNNIYNAVKISYFNEVYTICQQL 214
BLAST of mRNA_E-fasciculatus_F_contig15478.3831.1 vs. uniprot
Match: A0A8K0TLR3_9PEZI (Nucleotide sugar dehydrogenase n=1 Tax=Plectosphaerella cucumerina TaxID=40658 RepID=A0A8K0TLR3_9PEZI) HSP 1 Score: 75.5 bits (184), Expect = 2.130e-12 Identity = 71/225 (31.56%), Postives = 104/225 (46.22%), Query Frame = 1
Query: 58 IIQVGCGVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMNTAGIPCCHPDKCP-NDLNPEIVLLSVPTPLIKETQRLDMKYVWSTVPLVVKLINQSTGVAPIFV---IRSTVPPGMTKKWMAAVKEKTD-----KPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVKARMANAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLAHEL 705
I+ VG GVVG A K + G VR D A IEK+ + G+ + ND+ +IV+L+V TP D + V + + + FV +RSTVPP T+K + + E+ + F VA PEFLRAVS E+D PW V G + A M + F + + +AEAE +K V N N +KIS N ++ + ++
Sbjct: 4 IVIVGSGVVGQATGKGFAKKGHSVRFVDNDSATIEKLLSTGLVAMTAFQVDWNDV--DIVMLAVRTPTA------DGRVVLDHIEAAALDVGRGLATTNNFVTVVVRSTVPPSTTEKRITPILERASGKRLGQGFGVAMNPEFLRAVSNEQDFAQPWITVVGAK--DPRTTAIMDKLYQPF----GAPVLHCALAEAEMIKYVSNTYNAVKISNFNEVHAICSKM 214 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15478.3831.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15478.3831.1 >prot_E-fasciculatus_F_contig15478.3831.1 ID=prot_E-fasciculatus_F_contig15478.3831.1|Name=mRNA_E-fasciculatus_F_contig15478.3831.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=237bp MSSLASAASRSAATGRKESIIQVGCGVVGGAYAKAYKHHGFEVRGFDVVPback to top mRNA from alignment at E-fasciculatus_F_contig15478:1..2094- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15478.3831.1 ID=mRNA_E-fasciculatus_F_contig15478.3831.1|Name=mRNA_E-fasciculatus_F_contig15478.3831.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2094bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15478:1..2094- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15478:1..2094- >mRNA_E-fasciculatus_F_contig15478.3831.1 ID=mRNA_E-fasciculatus_F_contig15478.3831.1|Name=mRNA_E-fasciculatus_F_contig15478.3831.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1422bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15478:1..2094- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |