mRNA_E-fasciculatus_F_contig1544.3812.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1544.3812.1 vs. uniprot
Match: D8LKG0_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKG0_ECTSI) HSP 1 Score: 681 bits (1758), Expect = 4.940e-242 Identity = 364/504 (72.22%), Postives = 377/504 (74.80%), Query Frame = 1
Query: 1 MQYEDSEGYLWTEEQDDDGYVYFVNANTMASAQYIRRCTRETAWELPPSAREVEVPYAADEAASSALVPLQDASTSWTEVFDESTNSTYYFNTLTQESSWDLGTDERVASGIYHPPGGDDDAPIDLYSSSHNLEGESSISSSWRDEVLAGFQVPQEVSEAVGRAGSAHVWPRTVDGRPSRLERWDVLKARSAHSASASDPYREHFSTGEAWRLEHPEFEPKLCFYAFDTAVEHVERYWVEEAEAPFRCRLQRDGLKFSRDIAKWEARAPARQNAXXXXXXXXXXXXXXGTPGQELDGDEHWGGDXXXXXXXXXXXXXXXXXXXXD--GAGFFAFPLVVHNSHSHHVDWTSGPDRYQITQDSEPEWGWTRLFTFFAYAASKYHVLETTQAPLAQKASLWKKITIILFAIVKGNFLTAQPGWKCVLAFFAFDDMVPGSNRYYIEEKDEPHLRTRIGMEASCRWDARHSFAAFDVPVPGSCALDVHYTVRSTDSLNPYPEQCRISLK 1506
MQYEDS+G LW EEQDDDG VYFVNA+TM ESSWDLGTDER+ASGIYHP GGDDDA I YSSS LE ESSISSSWRDEVL GFQVPQEVSEAVGRAGSAH+WPRTVDGRPSRLERWDVLKA SDPYREHFSTGEAWRLEHPEFEPKLCFYAFDTAVEHVERYWVEEAEAPFRCRLQRDGLKFSRDIA WEARAPA++N G+PG +LDGDEHWGG+ XXXXXXXXXXXXX GAGFFAFPLVVHNSH+HHVDWTSGPDRYQITQDSEPEWGWTRLFTFFAYAASKYHVLETTQAPLAQK IVKGNFLT +PGWKCVLAFFAF+DMVPGSNRYYIEEKDEPHLRTRIGMEASCRWDARHSFAAFDVPVPGSCALDVHYT+RSTDSLNPYPEQCRISLK
Sbjct: 1 MQYEDSKGDLWVEEQDDDGDVYFVNADTM-------------------------------------------------------------------ESSWDLGTDERLASGIYHPSGGDDDALIGPYSSSQTLEAESSISSSWRDEVLVGFQVPQEVSEAVGRAGSAHIWPRTVDGRPSRLERWDVLKA--------SDPYREHFSTGEAWRLEHPEFEPKLCFYAFDTAVEHVERYWVEEAEAPFRCRLQRDGLKFSRDIATWEARAPAKKN------DNDKGNSGVGSPGGDLDGDEHWGGEGVGGDGRXXXXXXXXXXXXXXXXGAGFFAFPLVVHNSHAHHVDWTSGPDRYQITQDSEPEWGWTRLFTFFAYAASKYHVLETTQAPLAQK-------------IVKGNFLTPEPGWKCVLAFFAFNDMVPGSNRYYIEEKDEPHLRTRIGMEASCRWDARHSFAAFDVPVPGSCALDVHYTIRSTDSLNPYPEQCRISLK 410
BLAST of mRNA_E-fasciculatus_F_contig1544.3812.1 vs. uniprot
Match: A0A7S3Y5K5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5K5_HETAK) HSP 1 Score: 171 bits (432), Expect = 5.110e-45 Identity = 102/313 (32.59%), Postives = 141/313 (45.05%), Query Frame = 1
Query: 586 SASDPYREHFSTGEAWRLEHPEFEPKLCFYAFDTAVEHVERYWVEEAEAPFRCRLQRDGLKFSRDIAKWEARAPARQNAXXXXXXXXXXXXXXGTPGQELDGDEHWGGDXXXXXXXXXXXXXXXXXXXXDGAGFFAFPLVVHNSHSHHVDWTSGPDRYQITQDSEPEWGWTRLFTFFAYAASKYHVLE-----TTQAPLAQKASLWKKITIILFAIVKGNFLTAQPGWKCVLAFFAFDDMVPGSNRYYIEEKDEPHLRTRIGMEASCRWDARHSFAAFDVPVP--GSCALDVHYTVRSTDSLNPYPEQCRISL 1503
S +PYR+ F+ EA ++ F FYAF AV H + VE AP R R +R + F RDI KW + F+A+P ++ HVDW+SGPDRY I+QD P GW R F F+AY ASKYHVLE T P + + IVKG+++ A+PGW+C F+ DD PG+N Y++++++EP RTRIG+E + W G+ + VHY +RSTDS + YP+Q RI+L
Sbjct: 34 SQPEPYRQRFTRQEADEVDWSTF---ATFYAFAEAVPHADPVAVEAHPAPRRHRARRPRITFPRDITKWNESKKDK---------------------------------------------------------FYAYPQTYQGTNEFHVDWSSGPDRYMISQDGLPRMGWKRQFQFYAYGASKYHVLEKVLDMATARPGERPG----------YKIVKGHYIPAEPGWRCRFGFYGLDDPAPGANLYHVQDQEEPFYRTRIGLERATHWXXXXXXXXXXXXXXXHGTSKVSVHYMIRSTDSEDVYPDQHRITL 276
BLAST of mRNA_E-fasciculatus_F_contig1544.3812.1 vs. uniprot
Match: A0A836CAN8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAN8_9STRA) HSP 1 Score: 155 bits (391), Expect = 7.330e-41 Identity = 70/158 (44.30%), Postives = 97/158 (61.39%), Query Frame = 1
Query: 1030 VDWTSGPDRYQITQDSEPEWGWTRLFTFFAYAASKYHVLETTQAPLAQKASLWKKITIILFAIVKGNFLTAQPGWKCVLAFFAFDDMVPGSNRYYIEEKDEPHLRTRIGMEASCRWDARHSFAAFDVPVPGSCALDVHYTVRSTDSLNPYPEQCRISL 1503
+DWTSGPDRY ++ EP WGWTR+FT A+A SKYH+LE P + IVKG + + W+C AFFAFD VPGS + +++ + EPH+R+R+ + S RW+ S F +P+P + +VHYTVRS +SL+ +PEQ RI L
Sbjct: 1 MDWTSGPDRYCVSVGDEPSWGWTRVFTMHAFAVSKYHLLERLDPPS--------------YRIVKGTHIKPERDWRCCFAFFAFDGPVPGSTQLFVQMRGEPHIRSRVALTHSERWEDHLSMYVFCMPMPNTAQFNVHYTVRSAESLDAFPEQDRIHL 144
BLAST of mRNA_E-fasciculatus_F_contig1544.3812.1 vs. uniprot
Match: A0A7S4E3X4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E3X4_9STRA) HSP 1 Score: 131 bits (329), Expect = 2.650e-29 Identity = 110/379 (29.02%), Postives = 152/379 (40.11%), Query Frame = 1
Query: 406 ESSISSSWRDEVLAGFQVPQEVSEAVGRAGSAHVWPRTVDGRPSRLERWDVLKARSAHSASASDPYREHFSTGEAWRLEHPEFEPKLCFYAFDTAVEHVE---------RYWVEEAEAPFRCRLQRDGLKFSRDIAKWEARAPARQNAXXXXXXXXXXXXXXGTPGQELDGDEHWGGDXXXXXXXXXXXXXXXXXXXXDGAGFFAFPLVVHNSHSHHVDWTSGPDRYQITQDSEPEWGWTRLFTFFAYAASKYHVLETTQAPLAQKASLWKKITIILFAIVKGNFLTAQPGWKCVLAFFAFDDMVPGSNRYYIEEKDEPHLRTRIGMEASCR---WDARH-SFAAFDVPVPGSCALDVHYTVRSTDSLNPYPEQCRISL 1503
ES SWRD+VL ++VP S + H LE +L+ + + PYR S EA + + P L Y F EH E RY ++ AE P R RL +WE A Q D + W + FFA P H+DWTS PDRY ++ + P W R F FFAY A+K+H+LE ++ + ++ +V G+ W+C+ AFFAFD VP +N+Y I++ + + R R+GM AS R WD F A+DVPVPG+ V Y VR D N EQ R+S+
Sbjct: 137 ESEPPESWRDKVLEAWRVPPLWSTQMRSDTHKH------------LEDCTLLRVNA--QTARDGPYRHRISIEEADDV----WAPHLYLYVFP---EHPEGSVAKGIARRYVLDRAEEPHRSRL------------RWERDAKP----------------------QTRDTEPSW------------------CAPRGEFKSFFALPEPQPGLSEFHIDWTSAPDRYMVSTEYRPAAAWLRCFRFFAYKATKFHLLERVWPHGSELTTSYR--------LVAGHECPVNAHWRCLFAFFAFDSCVPNANQYTIQQSVDGYDRLRVGMTASIRPGEWDPNDLKFYAYDVPVPGTAKFSVQYRVR--DGTNMECEQNRLSI 432
BLAST of mRNA_E-fasciculatus_F_contig1544.3812.1 vs. uniprot
Match: A0A7S3K3X8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3X8_9STRA) HSP 1 Score: 122 bits (305), Expect = 1.710e-26 Identity = 92/304 (30.26%), Postives = 129/304 (42.43%), Query Frame = 1
Query: 586 SASDPYREHFSTGEAWRLEHPEFEPKLCFYAFDTAVEHVE----RYWVEEAEAPFRCRLQRDGLKFS--RDIAKWEARAPARQNAXXXXXXXXXXXXXXGTPGQELDGDEHWGGDXXXXXXXXXXXXXXXXXXXXDGAGFFAFPLVVHNSHSHHVDWTSGPDRYQITQ--DSEPEWGWTRLFTFFAYAASKYHVLETTQAPLAQKASLWKKITIILFAIVKGNFLTAQPGWKCVLAFFAFDDMVPGSNRYYIEE--KDEPHLRTRIGME-ASCR-WDARHSFAAF--DVPVPGSCALDVHYTVR 1455
S+ PYRE F W ++ L Y F +E RY +E AE P R RL+ DG + RD +W+A R + F+AFP N+ VDWTSGPDRY+I + +S PE GW R F FFAY A+KYH+L A ++ ++ I+ G+ Q W+C AFFA D+ PG+N+Y+I++ + E + R RIGM A C WD F + D+P P + +V Y +R
Sbjct: 56 SSRPPYRERF----CWNDADDRWQASLYLYVFPHLPPGLEQCLRRYVLERAENPIRSRLRWDGQQKPQRRDATEWKALRSGRND-------------------------------------------------------FWAFPERTANAQELAVDWTSGPDRYRIIRHPESRPEAGWLRCFRFFAYPATKYHILYRDWPSGAPVSTSYR--------IISGHLCPVQRPWRCAFAFFALDEQAPGTNKYFIQKTPQSEYYPRIRIGMTPAQCGGWDPHDQFIFYAPDMPWPCTAKFNVQYKMR 292
BLAST of mRNA_E-fasciculatus_F_contig1544.3812.1 vs. uniprot
Match: A0A7S2S6V9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S6V9_9STRA) HSP 1 Score: 122 bits (306), Expect = 2.610e-26 Identity = 97/367 (26.43%), Postives = 143/367 (38.96%), Query Frame = 1
Query: 427 WRDEVLAGFQVPQEVSEAVGRAGSAHVWPRTVDGRP----SRLERWDVLKARSAHSASASDPYREHFSTGEAWRLEHPEFEPKLCFYAFDTAVEHVERYWVEEAEAPFRCRLQRDGLKFS--RDIAKWEARAPARQNAXXXXXXXXXXXXXXGTPGQELDGDEHWGGDXXXXXXXXXXXXXXXXXXXXDGAGFFAFPLVVHNSHSHHVDWTSGPDRYQI-TQDSEPEWGWTRLFTFFAYAASKYHVLETTQAPLAQKASLWK-KITIILFAIVKGNFLTAQPGWKCVLAFFAFDDMVPGSNRYYIEEKDEPHLRTRIGMEASC--RWDARHSFAAFDVPVPGSCALDVHYTVRSTDSLNPYPEQCRI 1497
W+ E++A F+V +V E G H++P P S E D + + A S D E + WR P Y F + VE PF RL+ G RDI+ W++ P + GF+ +P +H + +DW+S PDRY+I T + E GW R F A+AASKYH+LE + + +AS+ I + + I KGNF GW+C+ AF+AFD+ PG++RYY + K +P+ R+G E + W+ V Y + DS PEQ R+
Sbjct: 132 WKREIMASFEVAPQVPEIQSNEGKRHIFPHCDPVSPLVRISVFENLDPPRHKIA--VSLGDVVDEGT---DYWR-------PVQYLYVFACEMPDTIPLEVELRRDPFGNRLKFFGKSNPQPRDISNWKSYTPIPK-------------------------------------------------------GFYVYPAPMHGTSPFFLDWSSAPDRYKISTSIASSELGWLRCLRFEAFAASKYHILEGSFVDESMEASMSVGAIPRLSYRIHKGNFCPCDQGWRCIFAFYAFDNPGPGTSRYYCQHKVDPYYTIRVGKEPTYIHDWEDYAXXXXXXXXXXXXXXFSVDYVTQDVDSRTDTPEQSRV 431
BLAST of mRNA_E-fasciculatus_F_contig1544.3812.1 vs. uniprot
Match: A0A7S2AWR6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AWR6_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 4.270e-9 Identity = 22/40 (55.00%), Postives = 33/40 (82.50%), Query Frame = 1
Query: 1243 QPGWKCVLAFFAFDDMVPGSNRYYIEEKDEPHLRTRIGME 1362
+ GW+C+ AF+AFD+M+PG+ RYY++E+ EPH R R+G E
Sbjct: 3 EEGWRCLFAFYAFDEMIPGTTRYYVQEQFEPHQRIRVGQE 42 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1544.3812.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1544.3812.1 >prot_E-fasciculatus_F_contig1544.3812.1 ID=prot_E-fasciculatus_F_contig1544.3812.1|Name=mRNA_E-fasciculatus_F_contig1544.3812.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=508bp MQYEDSEGYLWTEEQDDDGYVYFVNANTMASAQYIRRCTRETAWELPPSAback to top mRNA from alignment at E-fasciculatus_F_contig1544:1768..7045- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1544.3812.1 ID=mRNA_E-fasciculatus_F_contig1544.3812.1|Name=mRNA_E-fasciculatus_F_contig1544.3812.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5278bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1544:1768..7045- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1544:1768..7045- >mRNA_E-fasciculatus_F_contig1544.3812.1 ID=mRNA_E-fasciculatus_F_contig1544.3812.1|Name=mRNA_E-fasciculatus_F_contig1544.3812.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3048bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1544:1768..7045- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |