mRNA_E-fasciculatus_F_contig1543.3805.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1543.3805.1
Unique NamemRNA_E-fasciculatus_F_contig1543.3805.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1543.3805.1 vs. uniprot
Match: D7G7X5_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X5_ECTSI)

HSP 1 Score: 619 bits (1597), Expect = 4.220e-214
Identity = 328/350 (93.71%), Postives = 331/350 (94.57%), Query Frame = 1
Query:    1 SKHLLEIEVVGSKRRVWAAESKQECRRWVSAIKAAMTERPVNPDETVLGEDQLPIIPHDSCHRHHMESYLSARGFLRNATSTEDYLSALKGLMAEVGRGGGGGLQEGGEKNSSMGVPVKWVKQQLPGSERVYQASGRGRGKSELAQLWKDMKRDTVSINGRVMTGERGPEGIIGALTRCILAQAGRLSASDSLSKLSEAQSLLAARDVLLACDRTTSGGDTYLVVDNLCRNPPLVVLVPASQEAEPLDITVTLHPRAAQVQAQGHKQSPSRQYRQTIDGGAKSLQAKSPPSPGELPEPPSPSSLGSGSAAASPSFGHRGSGVQRSPPSACNSERDCASPGGGGDGDSKAQ 1050
            SKHLLEIEVVGSKRRVWAAESKQECRRWVSAIKAAMTERPVNPDET+LGEDQLPIIPHDSCHRHHMESYLSARGFLRNATSTEDYLSALKGLMAEVGRG GGGLQEGGEK+SSMGVPVKWVKQQLPGSERVYQASGRGRGKSELAQLWKDMKRDTVSINGRVMTGERGPEGIIGALTRCILAQAGRLSASDSLSKLSEAQSLLAARDVLLACDRTTSGGDTYLVVDNLCRNPPLVVLVPASQEAEPLDITVTLHPRAAQVQ QGHKQSPSR YR TIDGG K  Q  SPPSPGELPE    SSLGSGSAAASPSFGHR SGVQRSPPSA NSE    SPGGGGDGD+KAQ
Sbjct:   24 SKHLLEIEVVGSKRRVWAAESKQECRRWVSAIKAAMTERPVNPDETILGEDQLPIIPHDSCHRHHMESYLSARGFLRNATSTEDYLSALKGLMAEVGRGTGGGLQEGGEKDSSMGVPVKWVKQQLPGSERVYQASGRGRGKSELAQLWKDMKRDTVSINGRVMTGERGPEGIIGALTRCILAQAGRLSASDSLSKLSEAQSLLAARDVLLACDRTTSGGDTYLVVDNLCRNPPLVVLVPASQEAEPLDITVTLHPRAAQVQTQGHKQSPSRHYRHTIDGGTKGPQPNSPPSPGELPEXXXXSSLGSGSAAASPSFGHRSSGVQRSPPSARNSEGGFTSPGGGGDGDTKAQ 373          
BLAST of mRNA_E-fasciculatus_F_contig1543.3805.1 vs. uniprot
Match: A0A6H5KYY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYY2_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 7.310e-47
Identity = 104/140 (74.29%), Postives = 109/140 (77.86%), Query Frame = 1
Query:  634 CDRTTSGGDTYLV-VDNLCRNPPLVVLVPASQEAEPLDITVTLHPRAAQVQAQGHKQSPSRQYRQTIDGGAKSLQAKSPPSPGELPEPPSPSSLGSGSAAASPSFGHRGSGVQRSPPSACNSERDCASPGGGGDGDSKAQ 1050
            C  +  G  T  + VDNLCRNPPLVVLVPASQEAEPLDITVTLHPRAAQ Q QGHKQ+PSR YR TIDGG K  QA SPPSPGELPE      LGS SAAAS SF HR SGVQRSPPSA NSE +  SPGGGGDGD+KAQ
Sbjct:   63 CSSSRCGKPTDAIQVDNLCRNPPLVVLVPASQEAEPLDITVTLHPRAAQKQTQGHKQNPSRHYRHTIDGGTKGSQANSPPSPGELPEXXXXXXLGSASAAASRSFEHRSSGVQRSPPSARNSEGEFTSPGGGGDGDTKAQ 202          
BLAST of mRNA_E-fasciculatus_F_contig1543.3805.1 vs. uniprot
Match: A0A7S4HSG3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HSG3_9STRA)

HSP 1 Score: 144 bits (363), Expect = 5.850e-36
Identity = 95/227 (41.85%), Postives = 131/227 (57.71%), Query Frame = 1
Query:  166 IPHDSCHRHHMESYLSARGFLRNATSTEDYLSALKGLMAEVGRGGGGGL------------QEGGEKNS-----SMGVPVKWVKQQLPGSE-----RVYQASGRGRGKSELAQLWKDMKRDTVSINGRVMTGE--RGPEGIIGALTRCILAQ----AGRLSASDSLSK---LSEAQSLLAARDVLLACDRTTSGGDTYLVVDNLCRNPPLVVLVPASQEAEPLDITV 753
            +P  S +R  +E YL+ +  ++ A+S E Y+ AL  LM   G GGGG +             + G   S     S+ VPV+W+K+Q+  +      R ++  G   G   +AQLWKDM RD+V+ING ++ G+   GPE I+GALTR I++     A   +A  S  +   ++EAQS+  ARDVLLAC RT SGGD+Y  VDNLC N  LVVL P++ EAEPL I V
Sbjct:    3 VPSRSPYRADLEQYLAVQSAVKKASSREAYMRALSVLMLPGGAGGGGSVLPSPPSDLASQASDAGSAQSQPSGRSLNVPVQWIKEQVEVASGGDGVRAFREEGVSTG---IAQLWKDMSRDSVTINGELLKGDSPHGPECIVGALTRSIMSHDRSAAQNTAAPSSYRRKFAINEAQSVSYARDVLLACSRTRSGGDSYYCVDNLCSNSDLVVLCPSTAEAEPLKIEV 226          
BLAST of mRNA_E-fasciculatus_F_contig1543.3805.1 vs. uniprot
Match: A0A6U3S3W6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3S3W6_9STRA)

HSP 1 Score: 142 bits (359), Expect = 3.790e-34
Identity = 97/264 (36.74%), Postives = 142/264 (53.79%), Query Frame = 1
Query:   40 RRVWAAESKQECRRWVSAIKAAMTERPVNPDETVLGEDQLP---------------IIPHDSCHRHHMESYLSARGFLRNATSTEDYLSALKGLMAEVGRGGGGGLQEGGEKNSSMGVPVKWVKQQ---LPGSERVYQASGRGRGKSELAQLWKDMKRDTVSINGRVMTGE--RGPEGIIGALTRCILAQAGRLSASDSLS------KLSEAQSLLAARDVLLACDRTTSGGDTYLVVDNLCRNPPLVVLVPASQEAEPLDITV 753
            +R+W   SK++ + W+ AI  AM    V   +  L     P               I+P +S ++ ++E YL  +  ++NATS E+Y+  L  L+  V                 + VPV+W+K+    L  S+   +A       + ++QLWKDM RD+VSING +  G+   GPE IIG LTRCI+ +  R+S  +  S      +++E+ +L  ARDVLL+C+RT SGGD+Y  VD LC NP LVVL P+S  AEPL +TV
Sbjct:  129 KRLWMTSSKEDRQSWIHAIHEAMIGGSVTRGDNFLDYQIEPKKRTIMKKHDGGGDSIVPPNSPYKQNLEEYLRVQKGVKNATSKEEYVGMLS-LLCGV----------------PLNVPVQWIKEHVETLSSSQNASKAFEEDSVSNGISQLWKDMLRDSVSINGDLFAGDSGHGPEQIIGELTRCIM-KFDRMSLRNVDSNVMKKFRITESMALSYARDVLLSCNRTRSGGDSYYCVDTLCSNPDLVVLCPSSTVAEPLTVTV 374          
BLAST of mRNA_E-fasciculatus_F_contig1543.3805.1 vs. uniprot
Match: B8C5V8_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5V8_THAPS)

HSP 1 Score: 135 bits (341), Expect = 1.190e-31
Identity = 94/257 (36.58%), Postives = 135/257 (52.53%), Query Frame = 1
Query:   16 EIEVVGSKRRVWAAESKQECRRWVSAIKAAMTERPVNPDETVL-------GEDQLPIIPHDSCHRHHMESYLSARGFLRNATSTEDYLSALKGLMAEVGRGGGGGLQEGGEKNSSMGVPVKWVKQQLPGSE-RVYQASGRGRGKSELAQLWKDMKRDTVSINGRVMTGE--RGPEGIIGALTRCILAQAGRLSASDSL-SKLSEAQSLLAARDVLLACDRTTSGGDTYLVVDNLCRNPPLVVLVPASQEAEPLDITV 753
            E+ V G  RR+W A +  E + W+ AI  AM    V   +  L       G+ +   +P +S +   +E YL  R  +  A S +DYL AL  L                 +  S+ +P++W+K QL  S    +Q +    G   + QLWKD+ RD+V ING+V++GE   GP+ IIG LT+ I+      S  D   S ++E Q++  ARD++LA DRT SGGD+Y  ++NLC N  LVV+ P S  A PL ITV
Sbjct:  233 ELSVKGGPRRIWVANTPGERQGWIQAIHDAMIGASVVRGDNFLDYQMEHDGKTKRWTLPKNSPYSAFIEQYLQVREAINGAESKQDYLKALSIL-----------------RGKSIMIPIQWLKTQLDDSTPTAFQEADMSSG---VDQLWKDLLRDSVEINGQVISGESFHGPDRIIGNLTQLIIHHNQYNSCHDGKQSSITEVQAVSYARDIMLATDRTRSGGDSYYCIENLCLNRDLVVICPTSTVAAPLSITV 469          
BLAST of mRNA_E-fasciculatus_F_contig1543.3805.1 vs. uniprot
Match: A0A7S2U7T9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7T9_9STRA)

HSP 1 Score: 134 bits (337), Expect = 3.690e-31
Identity = 95/268 (35.45%), Postives = 141/268 (52.61%), Query Frame = 1
Query:   10 LLEIEVVGSKRRVWAAESKQECRRWVSAIKAAMTERPVNPDETVL----------GEDQLP--IIPHDSCHRHHMESYLSARGFLRNATSTEDYLSALKGLMAEVGRGGGGGLQEGGEKNSSMGVPVKWVKQQLPGSERVYQASGRGRGKSE---LAQLWKDMKRDTVSINGRVMTGE--RGPEGIIGALTRCILAQAGRLSASDSLS---KLSEAQSLLAARDVLLACDRTTSGGDTYLVVDNLCRNPPLVVLVPASQEAEPLDITV 753
            + E+ V GS RR+W A SK+E   W+ A++ AM  + V   E+ L          G+ + P   IP  S  ++ +  YL  +  ++ A S   YL +LK  +                    + VPV+W+++ +  S      +   R +     + QLWKDM RD+VSING++  G+   GPE I+GAL RCI+ +  R +    +    +++EAQ+L  ARDVLLAC+RT SGGD+Y   D LC N  LV L P+S EA+P+ I V
Sbjct:   97 IFELTVSGS-RRLWMANSKKEREAWIHAVRDAMVGKSVVRGESSLDYEYESEAKKGKSRRPGSSIPAQSPFKNDLIHYLKVQTKIKTARSKTHYLGSLKRCVGVP-----------------LNVPVQWIREHVESSSSSITGAEAFREEDVSVGMKQLWKDMLRDSVSINGKIYKGDDPHGPERIMGALARCIM-RVDRSTEQAHIGDKHRITEAQALSYARDVLLACNRTRSGGDSYYCFDTLCNNSHLVALCPSSTEADPMKIVV 345          
BLAST of mRNA_E-fasciculatus_F_contig1543.3805.1 vs. uniprot
Match: A0A1E7ETM5_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ETM5_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.620e-29
Identity = 90/256 (35.16%), Postives = 136/256 (53.12%), Query Frame = 1
Query:   28 VGSKRRVWAAESKQECRRWVSAIKAAMTERPVNPD-ETVLGEDQLPIIPHDSCHRHHMESYLSARGFLRNATSTEDYLSALKGLMAEVGRGGGGGLQEGGEKNSSMGVPVKWVKQQLPGS------ERVYQASGRGRGKSELAQLWKDMKRDTVSINGRVMTGE--RGPEGIIGALTRCILAQAGRLSASDSLS---KLSEAQSLLAARDVLLACDRTTSGGDTYLVVDNLCRNPPLVVLVPASQEAEPLDITVTL 759
            VG   R+W A +K E ++W+ AI  AM  R +N D + V G      +   S ++  ++ YL  +  L+N+ S ++Y+  L  L                     + +PV+W+ +QL         +    A       S + QLW+D++RDT+ IN  +  G+   GPE IIGALTR I+A    +S SDS      + E++++  ARD+LL+ +RT SGGD+Y  +D L  N  LVV+VP+SQ+AEPL ITV L
Sbjct:  190 VGKFGRLWLARTKAERKKWLEAINDAMIGRSINQDSDNVHGRSGN--VNSRSPYKDDLKLYLKIKANLKNSKSKKEYIDGLINLSGR----------------DPLNIPVRWIMEQLENKNNGRTEDNTVGAFVETSINSSVEQLWRDLRRDTIRINKELFLGDSGHGPEKIIGALTRDIVA----VSRSDSKYYRYAIPESKAVAYARDILLSINRTRSGGDSYFCIDTLTSNSDLVVIVPSSQQAEPLSITVEL 423          
BLAST of mRNA_E-fasciculatus_F_contig1543.3805.1 vs. uniprot
Match: A0A7S1VEQ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VEQ9_9STRA)

HSP 1 Score: 128 bits (322), Expect = 4.780e-29
Identity = 99/277 (35.74%), Postives = 144/277 (51.99%), Query Frame = 1
Query:   10 LLEIEVVGSKRRVWAAESKQECRRWVSAIKAAMTERPV--NPDETVLG-------EDQLP-IIPHDSCHRHHMESYLSARGFLRNATSTEDYLSALKGLMAEVGRGGGGGLQEGGEKNSSMGVPVKWVKQQ--LPGSERVYQASGRGRGKSELAQLWKDMKRDTVSINGRVMTGERG--PEGIIGALT-------RCILAQAGRLSASDSLS-------KLSEAQSLLAARDVLLACDRTTSGGDTYLVVDNLCRNPPLVVLVPASQEAEPLDITVT 756
            + E+ V G  RR W A S+ E + W+ AI+ AM  +      DE   G         + P  +   S  +  +E YL  +  +R AT  + Y+SAL   + ++G G            +S+ VPV W++Q       +++++  G     S + QLWKD+ RDTV +NG +  G  G  PE IIGALT       R I+ Q+GR+   ++ S       ++SE Q+L  ARD+LLA +RT SGGD+Y  VD LCRN  LVV  P S EAEPL + ++
Sbjct:  432 IFELTVEGGPRRFWMANSRDERQAWIRAIQDAMMGKSAVSRGDEDHGGGAGAVGHNGRRPNTVNAKSPFKKDLEKYLRIQKDIRGATDKDTYVSAL---ITKMGVG------------TSLKVPVIWIEQNSMFEDPDKIFKEEGVS---SSVDQLWKDLFRDTVRVNGELFQGGSGHAPERIIGALTKEILSYDRSIMQQSGRVGFVNTASPNKRRKNEISEVQALAYARDILLAGNRTRSGGDSYYCVDALCRNADLVVATPRSAEAEPLQVKIS 690          
BLAST of mRNA_E-fasciculatus_F_contig1543.3805.1 vs. uniprot
Match: K0TJJ1_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TJJ1_THAOC)

HSP 1 Score: 124 bits (312), Expect = 2.980e-28
Identity = 91/253 (35.97%), Postives = 132/253 (52.17%), Query Frame = 1
Query:   10 LLEIEVVGSKRRVWAAESKQECRRWVSAIKAAMTERPVNPDETVLGEDQLPIIPHDSCHRHHMESYLSARGFLRNATSTEDYLSALKGLMAEVGRGGGGGLQEGGEKNSSMGVPVKWVKQQL-----PGSERVYQASGRGRGKSELAQLWKDMKRDTVSINGRVMTGERGPEGIIGALTRCILAQAGRLSASDSLSKLSEAQSLLAARDVLLACDRTTSGGDTYLVVDNLCRNPPLVVLVPASQEAEPLDITV 753
            + E+ V G  +R+W A S+++   WV AI+ AM      P   V G      +P  S +      +   R    +A S E+YL A++ LM                ++ S+ VPV +VK        PG       +       +LAQ+WKD++RD V +NGRV++GE  PE I+G+L   IL+   R   +D    ++E+Q++  ARDVLLACDRT S GD+YL  +NLC N  +VVL PAS  A+P+ I V
Sbjct:  137 VFELRVKGGGKRLWMATSREDRAAWVEAIRRAMAGP---PSAVVDGYSPAKRLPDSSPY----SMFAVIRDATSSARSKEEYLQAIE-LM----------------RDKSLQVPVNFVKVNYAALGSPGDHAQTDVT------EDLAQMWKDLRRDFVDVNGRVLSGEPFPEPIMGSLALEILS---RYHGND----VTESQAVSCARDVLLACDRTKSSGDSYLCAENLCLNRDMVVLCPASTGAKPISIRV 352          
BLAST of mRNA_E-fasciculatus_F_contig1543.3805.1 vs. uniprot
Match: A0A7S1FMB8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FMB8_9STRA)

HSP 1 Score: 121 bits (303), Expect = 1.440e-26
Identity = 89/249 (35.74%), Postives = 128/249 (51.41%), Query Frame = 1
Query:    1 SKHLLEIEVVGSKRRVWAAESKQECRRWVSAIKAAMTERPVNPDETVLGED-QLPIIPHDSCHRHHMESYLSARGFLRNATSTEDYLSALKGLMAEVGRGGGGGLQEGGEKNSSMGVPVKWVKQQLPGSERVYQASGRGRGKSELAQLWKDMKRDTVSINGRVMTGER-GPEGIIGALTRCILAQAGRLSASDSLSKLSEAQSLLAARDVLLACDRTTSGGDTYLVVDNLCRNPPLVVLVPASQEAEPL 741
            S H  E+ V G  +RVW A SK E   W+ AI   M    V     V     +  ++P  S ++  +E +   +  +R A    +YL    GL                  N S+ +PV W+++Q+  S+  +Q  G     + ++QLWKD+KRDTVSING V+ G+  GPE I G+LT  IL      +   +   +SE Q++  ARD+LLA +RT SGGD Y  VD LCR+  +V + P S +AEPL
Sbjct:  511 SGHAFEL-VDGGSKRVWLAGSKDERDSWIRAIHECMVGGSVLTGTYVHQRRYKKNMVPLSSPYKKDIEQFTQRQTAVREAKIRSEYLDVFSGLW-----------------NYSLSIPVFWIRKQM-NSDVAFQEEGI----ASISQLWKDLKRDTVSINGHVIRGDTDGPERIFGSLTTAIL-HCNVKNEQSNKPGISEVQAISFARDILLAGNRTRSGGDAYYCVDLLCRSD-IVAICPHSNDAEPL 734          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1543.3805.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7X5_ECTSI4.220e-21493.71PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KYY2_9PHAE7.310e-4774.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4HSG3_9STRA5.850e-3641.85Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A6U3S3W6_9STRA3.790e-3436.74Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
B8C5V8_THAPS1.190e-3136.58Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2U7T9_9STRA3.690e-3135.45Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A1E7ETM5_9STRA1.620e-2935.16Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S1VEQ9_9STRA4.780e-2935.74Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
K0TJJ1_THAOC2.980e-2835.97Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S1FMB8_9STRA1.440e-2635.74Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1543contigE-fasciculatus_F_contig1543:2..4482 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score630.9
Seed ortholog evalue3.4e-178
Seed eggNOG ortholog2880.D7G7X5
EggNOG OGs2DN4Z@1,2S66D@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons6
Model size1054
Cds size1050
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1543.3805.1prot_E-fasciculatus_F_contig1543.3805.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1543 4..4482 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928021.1618085-CDS-E-fasciculatus_F_contig1543:3..3811622928021.1618085-CDS-E-fasciculatus_F_contig1543:3..381Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1543 4..381 -
1695995791.6821475-CDS-E-fasciculatus_F_contig1543:3..3811695995791.6821475-CDS-E-fasciculatus_F_contig1543:3..381Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1543 4..381 -
1622928021.1761642-CDS-E-fasciculatus_F_contig1543:913..10361622928021.1761642-CDS-E-fasciculatus_F_contig1543:913..1036Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1543 914..1036 -
1695995791.6922536-CDS-E-fasciculatus_F_contig1543:913..10361695995791.6922536-CDS-E-fasciculatus_F_contig1543:913..1036Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1543 914..1036 -
1622928021.1934216-CDS-E-fasciculatus_F_contig1543:1890..20401622928021.1934216-CDS-E-fasciculatus_F_contig1543:1890..2040Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1543 1891..2040 -
1695995791.7030327-CDS-E-fasciculatus_F_contig1543:1890..20401695995791.7030327-CDS-E-fasciculatus_F_contig1543:1890..2040Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1543 1891..2040 -
1622928021.2384613-CDS-E-fasciculatus_F_contig1543:2837..30331622928021.2384613-CDS-E-fasciculatus_F_contig1543:2837..3033Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1543 2838..3033 -
1695995791.7118213-CDS-E-fasciculatus_F_contig1543:2837..30331695995791.7118213-CDS-E-fasciculatus_F_contig1543:2837..3033Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1543 2838..3033 -
1622928021.2512953-CDS-E-fasciculatus_F_contig1543:3308..34271622928021.2512953-CDS-E-fasciculatus_F_contig1543:3308..3427Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1543 3309..3427 -
1695995791.7209675-CDS-E-fasciculatus_F_contig1543:3308..34271695995791.7209675-CDS-E-fasciculatus_F_contig1543:3308..3427Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1543 3309..3427 -
1622928021.2635422-CDS-E-fasciculatus_F_contig1543:4398..44821622928021.2635422-CDS-E-fasciculatus_F_contig1543:4398..4482Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1543 4399..4482 -
1695995791.7313867-CDS-E-fasciculatus_F_contig1543:4398..44821695995791.7313867-CDS-E-fasciculatus_F_contig1543:4398..4482Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1543 4399..4482 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1543.3805.1

>prot_E-fasciculatus_F_contig1543.3805.1 ID=prot_E-fasciculatus_F_contig1543.3805.1|Name=mRNA_E-fasciculatus_F_contig1543.3805.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=350bp
SKHLLEIEVVGSKRRVWAAESKQECRRWVSAIKAAMTERPVNPDETVLGE
DQLPIIPHDSCHRHHMESYLSARGFLRNATSTEDYLSALKGLMAEVGRGG
GGGLQEGGEKNSSMGVPVKWVKQQLPGSERVYQASGRGRGKSELAQLWKD
MKRDTVSINGRVMTGERGPEGIIGALTRCILAQAGRLSASDSLSKLSEAQ
SLLAARDVLLACDRTTSGGDTYLVVDNLCRNPPLVVLVPASQEAEPLDIT
VTLHPRAAQVQAQGHKQSPSRQYRQTIDGGAKSLQAKSPPSPGELPEPPS
PSSLGSGSAAASPSFGHRGSGVQRSPPSACNSERDCASPGGGGDGDSKAQ
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mRNA from alignment at E-fasciculatus_F_contig1543:2..4482-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1543.3805.1 ID=mRNA_E-fasciculatus_F_contig1543.3805.1|Name=mRNA_E-fasciculatus_F_contig1543.3805.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4481bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1543:2..4482- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGCAAGCACCTGCTGGAGATTGAAGTGGTGGGCTCGAAAAGGAGAGTATG GGCGGCGGAGAGCAAGCAGGAGTGCCGTCGATGGGTGAGCAAAACCTAGG CCGAAAATTGCGGCTTGCATAGTCCAGAACGATACCCCGAGTGCAGGCGT AGGTGTGGGATAGCTCAAAAACATCGATGAACGCGAGTATCTTTCGCCCG TACACTCACCTTTACCGCAGCAAATCGCTTCTTTCTAGAAAAAGTGTTTG TGATCTAGGCAGCAGCTCGTTTTCGTTGAATTTCGGCGCAACATCGTGCC CTTCGATGAACAAGTACCAAGAGACATTAGCAAGGAAGCAGCAACTTTGT GCCGTCACCGATTCACACGGCCGCTTCCTCTTCTTTGTCGCCACGAGACA TGCATGCGACGCTTGCTTAAGTGGTGATTATCGTGCAAGGGAAACGCCGA AATACTTGGCTCAGATAGTAATAACAGTAGAAAGGATGCAATACCTTGCA AAGTCGCGTGATAACTACTTGTACTCTTCATAAGCAACAACACCGAGTAG AGAGTAATCCAAGATCGGAGGCTGCAATGAATACGAATGAGGAAGAGCAA CCACGCGGACACCATGACTTGAACTAAGGAGCTGTGTCCATCGCTTAGTA GCAACTTCTTTCCTTCTGCACTCGGAACCGGCGGTGCCTTGCTGCAGAGG GGAGAAACACGAACGGCTGAAAAGACAAAGTTTCGTGGAGTGGGCTGCAT TCTTTTGGCACCAACCCAGTTGACGTTTGTCGAGCCAGAATCCCGAGGAG CAAGAAATGCACGCTCTAAAATACATTGCTACGGCCAGTGCCCACCTGGT CGGCCATGGGGTTTGACTTTTCAGTCTATCCATCCAACTCACGCTTGAGC GTTTGACGCACCAATGTAGTCCCTGTCGGCTGCTGCAGTGACCAACCCGC GACCTTACTCTTTGTGTCGAGTGATATACAACAATTATTGCCAACCCGCG TGCTCACGTGTTCGGTGTCCGTGCTGGGCATGCTTTGTCCCTCACGGGAG GGTAGGTCAGCGCAATCAAGGCGGCGATGACGGAAAGGCCCGTCAATCCG GACGAGACAGTCTTGGGAGAGGACCAGCTGCCGATCATTCCCCACGACTC GTGCCACAGACATCACATGGAGAGGTTAGACTGCTACAAGTAGGAGGACT TTCTCTCCCCCCCCCCCCCCCCGCGCACCATCCAATCAACCAAGTCCTTC AAACTCCTCGACCAGCTCAAAATTCTTCACGCTAGAAGCAATGCTAATCT GGCTGGCAAAACCCCCACATGAGCCGCCACCCCTGGTAAGGAGTGCGACA GCCTATGGCAGCATCCCACAGTCATGAACGACAACGACTATACCCGCCCC CAGTCCCTCCCTTGCTCGTCTTACCGCCCCGCACCGCCCCTGCCTTCAGC TATCTTTCCGCTCGGGGGTTCCTTCGAAACGCCACATCCACCGAGGACTA TCTCTCCGCCCTCAAGGGATTGATGGCCGAGGTAGGGAGAGGGGGAGGAG GCGGTTTGCAAGAGGGAGGCGAGAAGAACAGCTCAATGGGGGTCCCCGTG AAGTGGGTCAAGCAGCAGCTACCGGGGTCGGAAAGGGTCTACCAGGTGTG AATACGCCGGGATCATATTTTGGGGAGTCTTGGCTGTTGATCTCTCATCC TCTCAGACGGGCAACTAATTGGGTACCCGTTCCGCTTTGGCTACCATGTC CCCTTTCATTCACCCTTTTATTGCAACTACTTATCCACTATAATGGCGAT CGGCAGTTTCTCGCCACCCGATGTTTCAACGTTTGGTAAGCGACATTCCT CAACGTGGCCATATCTTCCTCGAAGACACCCCTTTCCTTTCCGGAATCTT TCACCATGATAGGGTGCTCTCCTATGCCGCGTGGAGAGGAGGCGTGTCGA TTTCATCCTTGCATGCACTGTATACATGGGCATTCATGTCTGATACGACT GCCACTTAGACCATACGAACATTTTCGGCGGAGGCCACAGTAAGCGATAC GGTACCATGTCCGTCTTCAAATGTTCCAACTCTTCTATGCAACCGGTTCG ATCTTTCGGCCGCAAACATGGCACTGTAAACATTTCGAAGTACGTTAGTT TGCGCCTTATGCAAAAATTGTAAACCGTGAAGGCACCCATGTGCGGTATG TTGCCAATCCCGATATCAAGTGCCAACCTATCCTAGGGCCAAGCGTCAGG CAACAAGCACGTTATCGACATTCGACCAAAGGCAAGGAATGTGTGTGCTA TTACACGAAGATTCAAGTACAGTCGCTTTCACTTGAACAACGTGCACCAC TCAATAGATATGGAAGGCTGTTGCCTGGCACGACCCTCGCTTTCGTGTCT GCGTCGATGCCGTAAAAATAAACACTGCTTGTTAATTCGTAGGCATCAGG GCGGGGGCGTGGTAAGTCGGAGCTGGCGCAGTTGTGGAAGGACATGAAGC GGGACACGGTGTCGATTAACGGGAGGGTGATGACGGGGGAGCGAGGGCCA GAGGGCATCATAGGAGCTTTGACGCGGTGCATTCTCGCTCAGGTAAGATA TATGGGGGCACGACGGAAGCCACGAGGTCATGTCCGTGGTGTTTGTTATT TGTCGCGATCCGTTCGACCCCATTCTTAACTCGTCGAAAACACGTGACAA GAACAATATGAACGGTGCGCGGACTTGAGAGAGTGATGTAATCTCTTGAA AAACATGGTGGACAAAATATGCTTCGAAATAGTTTGCTTAGCGATTAATT AAGTTGATGTCAATGTCGGGTCGATAACGGGGCATTCAAGCAACCACCAA GAAGCTTATTGTTGATTTCCTGGGTCCGTTGAGGCAGAATGGCTAGATTA TGGTTACCGATATCCTTTGGACATTTTGTATGCAAGTCTCACCACGAAGC AGTACCATATTGCTCCAATTTGGTTTCTGGCTGTGGCTGTTGACCTTACA TAAAGACTTGGGATGTTCAGTTGCGTATGCCATGGTGTACTCCTTCAGCT CGCATGCGAGTTGGTGGGAGCTACCATCGACCCGACGCCAAAGCACACGG CTGACCTGACTGCGAAAAAATAGTTGATTTGGAGTGCGGCCTGTTGAACG GACAGTATTGTGGCCTTGTACATTGGCTGGGAGTGATGGTTGCATCTATC AAAAACTGTAGGGTAATTCTTCAGCGCACAATTGTGCTCGAGCCAGCGCC AATTTTTCACATTGGTGCACTTTCAAGAAGTTCGGCATGCGGCCTTCTTG TCAAGCTGGAAGTCGGAGCTGGCTTCACTGTGAATTCAACTAATACCGCT AGAGAACGATTGTGGACAAGTATAGGTAGTCAAGACCCAGAACCCGAGCC GTCCGTAAATGTAGCCAATGTTTTCTCTCTTTGACGCCTGCGGCAGGCTG GGAGGCTATCCGCTTCGGACTCTTTATCCAAGCTGTCGGAAGCTCAGAGT TTGTTGGCCGCGCGCGATGTGCTCCTCGCCTGCGATCGAACTACTTCCGG TGGAGACACTTACCTCGTGGTGAGAAAATCACAACAGTGTCCGCAGAAGA CGATTTTTGAGCCCTCTGCAGGCTGAATGACCCATCCATGTAGGAGGTCC AGCTTCGATTAGTTACAATCGCGCCTCGCCTCGTTCGGCCGGAGAAATCT CCGTTCAAATATTGGAGGCCCAGAAGCAAATATGTGTCATTAGCGAATCG TGTACGGTGTGCTGACCTACGGATATATACTAAGATGCTTACCGACGTGG GGGGGCGCCAGCAGCCAAAGCACGAGGTGATTGTGTTGAATTGTCGAGCG ATTCATACATCCTGTTGACGTAACCCCGGCTTCTATCTCGATCGCTGTCC GGGTTGGACGCCAGATTATACAGAATGCGGTACAATCTTGACCCGGTGGA TTTCAGGAGCTTGGGAAGCTTTTCGAATCTCGGAGAGGATTTCCGAATCT TGCCCACCTGCAACATGTTTCTATCCAAAAACCGGTGCACCCACTTCGCA ACGTCCCCTGTCCTTTCTCTCGCTATGATGAACCTATTATATGCAATCCA GGTGGACAACCTGTGCCGAAACCCCCCGCTAGTGGTGTTGGTGCCCGCTT CGCAAGAGGCGGAGCCGCTCGATATAACGGTAACCCTCCATCCGCGTGCC GCACAAGTGCAAGCACAAGGACACAAACAGAGCCCATCGCGACAATATCG CCAAACAATCGACGGCGGGGCGAAGAGCCTCCAAGCAAAAAGCCCTCCTT CTCCGGGGGAGCTGCCTGAGCCACCCTCCCCTTCGTCTCTCGGTAGCGGT TCGGCGGCGGCGAGCCCTTCCTTCGGGCATCGGGGCAGCGGTGTGCAACG AAGCCCTCCTAGCGCGTGCAACAGCGAACGGGATTGTGCCTCCCCCGGCG GGGGCGGGGATGGAGACTCGAAAGCCCAGAA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1543:2..4482-

>mRNA_E-fasciculatus_F_contig1543.3805.1 ID=mRNA_E-fasciculatus_F_contig1543.3805.1|Name=mRNA_E-fasciculatus_F_contig1543.3805.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2100bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1543:2..4482- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGCAAGCACCTGCTGGAGATTGAAGTGGTGGGCTCGAAAAGGAGAGTATG
GGCGGCGGAGAGCAAGCAGGAGTGCCGTCGATGGAGCAAGCACCTGCTGG
AGATTGAAGTGGTGGGCTCGAAAAGGAGAGTATGGGCGGCGGAGAGCAAG
CAGGAGTGCCGTCGATGGGTCAGCGCAATCAAGGCGGCGATGACGGAAAG
GCCCGTCAATCCGGACGAGACAGTCTTGGGAGAGGACCAGCTGCCGATCA
TTCCCCACGACTCGTGCCACAGACATCACATGGAGAGGTCAGCGCAATCA
AGGCGGCGATGACGGAAAGGCCCGTCAATCCGGACGAGACAGTCTTGGGA
GAGGACCAGCTGCCGATCATTCCCCACGACTCGTGCCACAGACATCACAT
GGAGAGCTATCTTTCCGCTCGGGGGTTCCTTCGAAACGCCACATCCACCG
AGGACTATCTCTCCGCCCTCAAGGGATTGATGGCCGAGGTAGGGAGAGGG
GGAGGAGGCGGTTTGCAAGAGGGAGGCGAGAAGAACAGCTCAATGGGGGT
CCCCGTGAAGTGGGTCAAGCAGCAGCTACCGGGGTCGGAAAGGGTCTACC
AGCTATCTTTCCGCTCGGGGGTTCCTTCGAAACGCCACATCCACCGAGGA
CTATCTCTCCGCCCTCAAGGGATTGATGGCCGAGGTAGGGAGAGGGGGAG
GAGGCGGTTTGCAAGAGGGAGGCGAGAAGAACAGCTCAATGGGGGTCCCC
GTGAAGTGGGTCAAGCAGCAGCTACCGGGGTCGGAAAGGGTCTACCAGGC
ATCAGGGCGGGGGCGTGGTAAGTCGGAGCTGGCGCAGTTGTGGAAGGACA
TGAAGCGGGACACGGTGTCGATTAACGGGAGGGTGATGACGGGGGAGCGA
GGGCCAGAGGGCATCATAGGAGCTTTGACGCGGTGCATTCTCGCTCAGGC
ATCAGGGCGGGGGCGTGGTAAGTCGGAGCTGGCGCAGTTGTGGAAGGACA
TGAAGCGGGACACGGTGTCGATTAACGGGAGGGTGATGACGGGGGAGCGA
GGGCCAGAGGGCATCATAGGAGCTTTGACGCGGTGCATTCTCGCTCAGGC
TGGGAGGCTATCCGCTTCGGACTCTTTATCCAAGCTGTCGGAAGCTCAGA
GTTTGTTGGCCGCGCGCGATGTGCTCCTCGCCTGCGATCGAACTACTTCC
GGTGGAGACACTTACCTCGTGGCTGGGAGGCTATCCGCTTCGGACTCTTT
ATCCAAGCTGTCGGAAGCTCAGAGTTTGTTGGCCGCGCGCGATGTGCTCC
TCGCCTGCGATCGAACTACTTCCGGTGGAGACACTTACCTCGTGGTGGAC
AACCTGTGCCGAAACCCCCCGCTAGTGGTGTTGGTGCCCGCTTCGCAAGA
GGCGGAGCCGCTCGATATAACGGTAACCCTCCATCCGCGTGCCGCACAAG
TGCAAGCACAAGGACACAAACAGAGCCCATCGCGACAATATCGCCAAACA
ATCGACGGCGGGGCGAAGAGCCTCCAAGCAAAAAGCCCTCCTTCTCCGGG
GGAGCTGCCTGAGCCACCCTCCCCTTCGTCTCTCGGTAGCGGTTCGGCGG
CGGCGAGCCCTTCCTTCGGGCATCGGGGCAGCGGTGTGCAACGAAGCCCT
CCTAGCGCGTGCAACAGCGAACGGGATTGTGCCTCCCCCGGCGGGGGCGG
GGATGGAGACTCGAAAGCCCAGGTGGACAACCTGTGCCGAAACCCCCCGC
TAGTGGTGTTGGTGCCCGCTTCGCAAGAGGCGGAGCCGCTCGATATAACG
GTAACCCTCCATCCGCGTGCCGCACAAGTGCAAGCACAAGGACACAAACA
GAGCCCATCGCGACAATATCGCCAAACAATCGACGGCGGGGCGAAGAGCC
TCCAAGCAAAAAGCCCTCCTTCTCCGGGGGAGCTGCCTGAGCCACCCTCC
CCTTCGTCTCTCGGTAGCGGTTCGGCGGCGGCGAGCCCTTCCTTCGGGCA
TCGGGGCAGCGGTGTGCAACGAAGCCCTCCTAGCGCGTGCAACAGCGAAC
GGGATTGTGCCTCCCCCGGCGGGGGCGGGGATGGAGACTCGAAAGCCCAG
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