mRNA_E-fasciculatus_F_contig1542.3798.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1542.3798.1 vs. uniprot
Match: D7FKI1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKI1_ECTSI) HSP 1 Score: 397 bits (1021), Expect = 1.490e-135 Identity = 214/227 (94.27%), Postives = 219/227 (96.48%), Query Frame = 1
Query: 136 MHVQRPKQESHLGQNNSWLRLDSGCNNYKPALVTRGGAAVSKTQPERSPYDQLKAFLNKRFFLLGAAAMVAAAKVAPSPGTTGGLLSLSVSKAGVSLVFFLVGLAIKLGELAGAALNFRLNLLTQGFSLGVLPAVGVGLSRVLAAGGMHPALADGVLILMCLPTTVNMCVILTQSAEGNTAAAAFNAVLGNLLGVVVTPALLLFLLGRRLDMAPSLLATFKKLGIKV 816
MHVQRPKQ+SH GQ+N+WLRL SGCN Y PALVTRGGA VSKTQPERSPYDQLKAFLNKRFFLLGAAAMVAAA+V PSPGTTGGLLSLSVSKAGVSLVFFLVGLAIKLGELAGAALNFRLNLLTQ FSLGVLPAVGVGLSRVLAAGG+HPALADGVLILMCLPTTVNMCVILTQSAEGNTAAAAFNAVLGNLLGVVVTPALLL LLGRRLDMAPSLLATFKKLGIKV
Sbjct: 1 MHVQRPKQQSHPGQHNNWLRLGSGCNKYNPALVTRGGADVSKTQPERSPYDQLKAFLNKRFFLLGAAAMVAAARVVPSPGTTGGLLSLSVSKAGVSLVFFLVGLAIKLGELAGAALNFRLNLLTQAFSLGVLPAVGVGLSRVLAAGGVHPALADGVLILMCLPTTVNMCVILTQSAEGNTAAAAFNAVLGNLLGVVVTPALLLLLLGRRLDMAPSLLATFKKLGIKV 227
BLAST of mRNA_E-fasciculatus_F_contig1542.3798.1 vs. uniprot
Match: A0A835Z827_9STRA (Putative sodium bile acid cotransporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z827_9STRA) HSP 1 Score: 144 bits (363), Expect = 7.190e-37 Identity = 91/178 (51.12%), Postives = 117/178 (65.73%), Query Frame = 1
Query: 301 FLNKRFFLLGAAAMVAAAKVAPSPGTTGGLL--SLSVSKAGVSLVFFLVGLAIKLGELAGAALNFRLNLLTQGFSLGVLPAVGVGLSRVLAAGGMHPALADGVLILMCLPTTVNMCVILTQSAEGNTAAA--AFNAVLGNLLGVVVTPALLLFLLGRRLDMAPSLLATFKKLGIKVRA 822
FLN FF+LG +V +AK+AP G TGGLL L V KA ++ +FFL G +L +L AA N RLN L QGF+LG+LP VG+G + LAA M P L +GV +MCLPTT++M V+L+Q+A G A A AFNAV GNLLG+VVTPAL+L L + L+ + +LG KV A
Sbjct: 51 FLNDNFFILGLVGVVTSAKIAPGLGCTGGLLRPELVVGKAAIAAIFFLTGFRTELRDLGYAAKNTRLNALVQGFNLGLLPLVGLGAGKALAALRMSPVLCEGVTAMMCLPTTISMSVVLSQAAGGAAAGAGAAFNAVAGNLLGLVVTPALILTTLPGGVRGEVQLIKSLLQLGSKVVA 228
BLAST of mRNA_E-fasciculatus_F_contig1542.3798.1 vs. uniprot
Match: A0A8J2SZL0_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZL0_9STRA) HSP 1 Score: 134 bits (336), Expect = 1.140e-32 Identity = 87/195 (44.62%), Postives = 120/195 (61.54%), Query Frame = 1
Query: 232 VTRGGAAVSKTQPERSPYDQLKAFLNKRFFLLGAAAMVAAAKVAPSPGTTGGLLSLSVSKAGVSLVFFLVGLAIKLGELAGAALNFRLNLLTQGFSLGVLPAVGVGLSRVLAAGGMHPALADGVLILMCLPTTVNMCVILTQSAEGNTAAAAFNAVLGNLLGVVVTPALLLFLLGRRLDMAPSLLATFKKLGIKV 816
V RGG AV + +P ++ AF+++ FF+ G A VA A ++P PG V K V+ +F L GL +KL EL AA N +LN LTQG +L PA+ + + VL + L DG+L+ CLPTTVNMCV LTQ+++G+ AAA NAV+GNLLGVVVTPAL+ L+ + + + P+ + K LG KV
Sbjct: 101 VLRGGGAV-----DTAPVKRITAFVDRNFFVCGMVASVAVAGLSPGPGQA---CEKFVGKYAVATIFVLSGLGLKLSELKKAATNTKLNGLTQGANLIAFPALMLPVISVLRKTSLDGRLLDGLLVTSCLPTTVNMCVALTQASDGDVAAALTNAVIGNLLGVVVTPALVFALMQKSVQLPPASIVA-KSLGAKV 286
BLAST of mRNA_E-fasciculatus_F_contig1542.3798.1 vs. uniprot
Match: A0A812IHJ9_9DINO (Slc10a7 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812IHJ9_9DINO) HSP 1 Score: 134 bits (338), Expect = 8.890e-32 Identity = 92/204 (45.10%), Postives = 126/204 (61.76%), Query Frame = 1
Query: 223 PALVTRGGAAVSKTQPERSP--YDQLKAFLNKRFFLLGAAAMVAAAKVAPSPGTTGGLLSLSV-SKAGVSLVFFLVGLAIKLGELAGAALNFRLNLLTQGFSLGVLPAVGVGLSRVLAAGG-MHPALADGVLILMCLPTTVNMCVILTQSAEGNTAAAAFNAVLGNLLGVVVTPALLLFLLGRR--LDMAPSLLATFKKLGIKV 816
P L ++S + P P Y +L + LN FFL+G V A++APS + GLL + S V+++F L G ++KL E+ AAL+FRLNLLTQ S+G++P + L ++ G + L DG++I CLPTTVNMCV+L +SA NTA A NA+LGNLLGV VTPALLL LG R + + P++ +KLGIKV
Sbjct: 2546 PQLNLLLAVSISISAPSFLPQWYTELGSKLNANFFLVGMLVAVTLARLAPSLAKSHGLLHVDTFSDYAVAVIFLLSGFSLKLSEMQKAALDFRLNLLTQTLSMGLIPLLAYPLVQLAHRGNWLRGQLLDGLMITACLPTTVNMCVLLAKSAGANTAVALTNAILGNLLGVCVTPALLLVTLGTRTSIQLGPAV----RKLGIKV 2745
BLAST of mRNA_E-fasciculatus_F_contig1542.3798.1 vs. uniprot
Match: A0A1Q9CJF7_SYMMI (Sodium/bile acid cotransporter 7 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9CJF7_SYMMI) HSP 1 Score: 134 bits (336), Expect = 1.650e-31 Identity = 87/179 (48.60%), Postives = 118/179 (65.92%), Query Frame = 1
Query: 292 LKAFLNKRFFLLGAAAMVAAAKVAPSPGTTGGLLSLSV-SKAGVSLVFFLVGLAIKLGELAGAALNFRLNLLTQGFSLGVLPAVGVGLSRVLAAGG-MHPALADGVLILMCLPTTVNMCVILTQSAEGNTAAAAFNAVLGNLLGVVVTPALLLFLLGRR--LDMAPSLLATFKKLGIKV 816
L++ LN FFL+G V A++APS + GLL + S V+++F L G ++KL E+ AAL+FRLNLLTQ S+G++P + L ++ G +H L DG++I CLPTTVNMCV+L +SA NTA A NA+LGNLLGV VTPALLL LG R + + P++ +KLGIKV
Sbjct: 1926 LRSKLNANFFLVGMLVAVILARLAPSLAKSHGLLHVDTFSDYAVAVIFLLSGFSLKLSEMQKAALDFRLNLLTQTLSMGLIPLLAYPLVQLAHRGAWLHGQLLDGLMITACLPTTVNMCVLLAKSAGANTAVALTNAILGNLLGVCVTPALLLITLGARTSIQLGPAV----QKLGIKV 2100
BLAST of mRNA_E-fasciculatus_F_contig1542.3798.1 vs. uniprot
Match: A0A812VP77_SYMPI (Slc10a7 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812VP77_SYMPI) HSP 1 Score: 124 bits (310), Expect = 5.460e-30 Identity = 82/164 (50.00%), Postives = 107/164 (65.24%), Query Frame = 1
Query: 352 AKVAPSPGTTGGLLSL-SVSKAGVSLVFFLVGLAIKLGELAGAALNFRLNLLTQGFSLGVLPAVGVGLSRVLAAGG--MHPALADGVLILMCLPTTVNMCVILTQSAEGNTAAAAFNAVLGNLLGVVVTPALLLFLLGRR--LDMAPSLLATFKKLGIKVRAGQ 828
A+ APS GGLL + SVS V+++F L G ++KL E+ AAL+FRLNLLTQ SLG++P + L + L G +H L DG++I CLPTTVNMCV+L +SA NTA A NA+LGNLLGV VTPALLL LG R + + P++ K+ + V GQ
Sbjct: 8 ARTAPSLAMNGGLLHVDSVSDYAVAVIFLLSGFSLKLSEMRAAALDFRLNLLTQMLSLGLIPLLAYPLVQ-LGHGSKWIHGQLLDGLMITACLPTTVNMCVLLAKSAGANTAVALTNAILGNLLGVCVTPALLLLTLGARASIQLGPAVQKLVVKVVVPVLLGQ 170
BLAST of mRNA_E-fasciculatus_F_contig1542.3798.1 vs. uniprot
Match: A0A7S2SW23_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW23_9STRA) HSP 1 Score: 122 bits (306), Expect = 3.620e-29 Identity = 84/167 (50.30%), Postives = 101/167 (60.48%), Query Frame = 1
Query: 337 AMVAAAKVAPSPGTTGGLL--SLSVSKAGVSLVFFLVGLAIKLGELAGAALNFRLNLLTQGFSLGVLPAVGVGLSRVLAAG-----GMHPALADGVLILMCLPTTVNMCVILTQSAEGNTAAAAFNAVLGNLLGVVVTPALLLFLLGRRLDMAPSLLATFKKLGIKV 816
A V A + P G GG+L + V VSL+F L GL + L EL AALN RLN L QGF+L PA+ GL ++L G L DG+++ C+PTTVNMCV+LTQSA GN A A FNAVLGNLLG+VVTP +L LL + A S L KKL IKV
Sbjct: 2 ASVLVAAMNPGLGAKGGVLRPEMWVDVGAVSLIFVLSGLGLPLKELRSAALNMRLNFLVQGFNLVAAPAIVFGLRQILEPLSNQWLGSTAWLWDGLIVGACVPTTVNMCVVLTQSAGGNVATALFNAVLGNLLGIVVTPLSILLLLNQATSTA-SFLTVLKKLAIKV 167
BLAST of mRNA_E-fasciculatus_F_contig1542.3798.1 vs. uniprot
Match: A0A8J5XWI7_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XWI7_DIALT) HSP 1 Score: 122 bits (306), Expect = 1.210e-28 Identity = 83/185 (44.86%), Postives = 113/185 (61.08%), Query Frame = 1
Query: 238 RGGAAVSKTQPERSP--YDQLKAFLNKRFFLLGAAAMVAAAKVAPSPGTTGGLLSL--SVSKAGVSLVFFLVGLAIKLGELAGAALNFRLNLLTQGFSLGVLPAVGVGLSRVLAA--GGMHPALADGVLILMCLPTTVNMCVILTQSAEGNTAAAAFNAVLGNLLGVVVTPALLLFLLGRRLDMA 774
RG A+ T ER P ++ + F+ + F +G A VAAA+VAP+ G GG L L +V + GV+ +FFL GL I+ ELA AA + RLN Q + + P + L +++ A + AL DG+L+ CLPTTVNMCVI+TQ+A GN A A NAV N GV VTP LLL L+GR +D++
Sbjct: 43 RGRASPCATAGERPPSAVERARTFVGQNTFPIGMALAVAAARVAPALGANGGPLRLDITVGRLGVAAIFFLSGLGIRTSELAQAATSVRLNAFVQLVTFALWPGMTWLLVQLVRAMHAPLSSALLDGLLVTSCLPTTVNMCVIMTQAAGGNVALAITNAVFSNTAGVFVTPLLLLGLMGRTIDVS 227
BLAST of mRNA_E-fasciculatus_F_contig1542.3798.1 vs. uniprot
Match: A0A7S0NFI1_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0NFI1_9EUKA) HSP 1 Score: 121 bits (304), Expect = 1.220e-28 Identity = 83/187 (44.39%), Postives = 115/187 (61.50%), Query Frame = 1
Query: 283 YDQLKAFLNKRFFLLGAAAMVAAAKVAPSPGTTGGLL--SLSVSKAGVSLVFFLVGLAIKLGELAGAALNFRLNLLTQGFSLGVLPAVGVGLSRVLAAGGMHPALADGVLILMCLPTTVNMCVILTQSAEGNTAAAAFNAVLGNLLGVVVTPALLLFLLGRRLDMA--PSLLATFKKLGIKVRAGQV 831
Y + FL++R+FL+GAA+ VA A +AP+ G TGG L+V+ +FFL GL + ELA AA R + QG +L VLP + ++ +L A + L G+L + LPTTVNMCV LT+SA GN A A FNAV+GN+LGVVVTP LLL LLG D++ ++ KK+ + + GQ+
Sbjct: 25 YRAVTGFLDRRYFLVGAASAVAMAAIAPTIGCTGGFFRPELTVNWGATCGIFFLSGLTLPTSELAAAAFRVREHTAIQGVNLIVLPLIMWSITTLLGAR-ISATLRAGLLAMSALPTTVNMCVALTRSAGGNEALAIFNAVIGNVLGVVVTPPLLLLLLGASADISIVDAMTKLTKKVVVPLVVGQL 210
BLAST of mRNA_E-fasciculatus_F_contig1542.3798.1 vs. uniprot
Match: A0A6U5I6C1_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A6U5I6C1_9EUKA) HSP 1 Score: 120 bits (301), Expect = 8.850e-28 Identity = 85/218 (38.99%), Postives = 126/218 (57.80%), Query Frame = 1
Query: 193 RLDSGCNNYKPALVTRGGAAVSKTQPERSPYDQLKAFLNKRFFLLGAAAMVAAAKVAPSPGTTGGLL--SLSVSKAGVSLVFFLVGLAIKLGELAGAALNFRLNLLTQGFSLGVLP-AVGVGLSRVLAAGGMHPALADGVLILMCLPTTVNMCVILTQSAEGNTAAAAFNAVLGNLLGVVVTPALLLFLLGRR--LDMAPSLLATFKKLGIKVRAGQV 831
+ +G + P L RGG ++ + +L AFL++RFF++G A V AA V P G G L +SV A +F + GL + +LA AA R +L Q F+L LP + +S + G ++ L+DG+L++ LPTTVNMCV LT+SA+GN A A FNAVLGNLLG+ V+P LLL ++G+ L A ++ + KK+ + + GQ+
Sbjct: 64 KAPAGLRSGFPPLRLRGGERAARRSRLCAALGELLAFLDRRFFIVGVAVAVTAASVFPGLGLPSGPLRPEVSVRWAAPCAIFLISGLTLPTSQLADAASRVRTHLGLQAFNLCALPLGMFAFVSALSGLGLVNKGLSDGLLVMSALPTTVNMCVALTRSAKGNEAIAIFNAVLGNLLGIFVSPLLLLLMVGQTGALPFADAVASLSKKVLLPLFVGQL 281 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1542.3798.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1542.3798.1 >prot_E-fasciculatus_F_contig1542.3798.1 ID=prot_E-fasciculatus_F_contig1542.3798.1|Name=mRNA_E-fasciculatus_F_contig1542.3798.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=282bp MRVVSSLSCFAAASPLLRSQLPFTTTATSSNDVQQLRNTHLGRPSMHVQRback to top mRNA from alignment at E-fasciculatus_F_contig1542:15878..17410+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1542.3798.1 ID=mRNA_E-fasciculatus_F_contig1542.3798.1|Name=mRNA_E-fasciculatus_F_contig1542.3798.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1533bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1542:15878..17410+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1542:15878..17410+ >mRNA_E-fasciculatus_F_contig1542.3798.1 ID=mRNA_E-fasciculatus_F_contig1542.3798.1|Name=mRNA_E-fasciculatus_F_contig1542.3798.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1692bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1542:15878..17410+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |