mRNA_E-fasciculatus_F_contig1542.3795.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1542.3795.1
Unique NamemRNA_E-fasciculatus_F_contig1542.3795.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1542.3795.1 vs. uniprot
Match: D7FKH9_ECTSI (1-alkyl-2-acetylglycerophosphocholine esterase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH9_ECTSI)

HSP 1 Score: 613 bits (1580), Expect = 2.240e-216
Identity = 316/360 (87.78%), Postives = 324/360 (90.00%), Query Frame = 1 
Query:    1 TQRGVVGASIILGLEGYLRSDGAPSLGDLLRSSPSWSSLAGSAHAWTVSAAVALCLVCLVSDLRTGLSRSAYQTRYLAREQARCIAKFSKMPGFFTEHLCGFYGAGFESGHFHGPGVPCFPAAPVARGRAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSSCMFPDGRITTYAKAPNLKDVGAPENHAFRQVLAQLRRRGREIQLTRAHLAKLARGSATDLEACRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRAGAKMDPEETETGYSMAFIMDAWTFPCSEEARAQGVDIPLVVMTNDNFLGSEGKKNEERLVNNAVRMVRDGANDLTIQLRVKDA 1080
            TQ GV+GASIILGLEG L SD APSLGDLLRS               VSAA ALCLVCLVSDLRTGLSRSAYQTRYL REQARCIAKFSKMPGFFTEHLCGFYG GFESGHFH PGVPCFPAAPVARG AKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVA+FLEHNDGSGSSCMFPDGRITTYAKAPNLKDVGAP+NHAFR  LAQLRRRGREI LTRAHLA+LARGSATDLE CRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSR GA MDPEET  GYSMAFIMD WTFPCSEEARAQ VDIPLVV+T+D FLG+EGKKNEERLV+NAVRMVRDGANDL IQLRVKDA
Sbjct:  229 TQMGVIGASIILGLEGSLLSDSAPSLGDLLRSXXXXXXXXXXXXXXXVSAAAALCLVCLVSDLRTGLSRSAYQTRYLDREQARCIAKFSKMPGFFTEHLCGFYGPGFESGHFHAPGVPCFPAAPVARGEAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAIFLEHNDGSGSSCMFPDGRITTYAKAPNLKDVGAPDNHAFR--LAQLRRRGREIGLTRAHLARLARGSATDLETCRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRGGAGMDPEET--GYSMAFIMDGWTFPCSEEARAQSVDIPLVVITSDGFLGAEGKKNEERLVDNAVRMVRDGANDLAIQLRVKDA 584
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BLAST of mRNA_E-fasciculatus_F_contig1542.3795.1 vs. uniprot
Match: A0A835YXZ7_9STRA (1-alkyl-2-acetylglycerophosphocholine esterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXZ7_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.830e-29
Identity = 101/341 (29.62%), Postives = 150/341 (43.99%), Query Frame = 1 
Query:  136 WTVSAAVALCLVCLVSDLRTGLSRSAYQTRYLAR-EQARCIAKFSKMPGFFTEHLCGFYGAGFESGHFHGPG---VPCFPAAPVARGRAKRPMVIFSHGLGGNRSMYAEHGAAYAAQ-----------------------------------GYVAVFLEHNDGSGSSCMFPDGRITTYAKAPNLKDV-GAPENHAFRQVLAQLRRRGREIQLTRAHLAKLA---RGSATDLEACRLV------GLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRAGAKMDPEETETGYSMAFIMDAWTFPCSEEARAQGVDIPLVVMTNDNFLGSEGKKNEERLV 1011
            W+V  A AL   C+++D+R  L+R+A++  Y    +    +AKF+ MP     H+       F+  +         P FP AP A      P+V+F HGLGGNRS+ + + A  A+                                    GYV + +E NDG+ +    P GR T Y   P+  ++ G   +  +R+  AQL RR RE +L   H   LA    G  +D  A   V           +D       GHS+G  TVL++L  + E  SR    +D +  +     A +MD WT P S+ ARA    +PLVVMT + F  +  ++ E+ LV
Sbjct:  188 WSVGWAAALVAACVLADVREALTRAAFKLPYFGGLKDTSAVAKFASMPPLVWSHVASMRDVAFDGAYVRCTADALAPAFPLAPCAAAAGGWPIVVFFHGLGGNRSLNSSYAAELASHSNSYPTFTTLSPYSYRSXXXXXXXXXXXXXXXXXXGYVVLCVESNDGTATLTTLPSGRSTYYTPCPHRPEIEGLGLDREWRE--AQLMRRMRECELVFGHAQALAGPVNGQKSDFTALASVLDPANGTSAQQLDASAIGLYGHSYGACTVLELLH-QSEALSRV---VDADRIKA----AVVMDPWTMPLSDAARAHATAVPLVVMTCEGFQYANNREREDALV 518
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1542.3795.1 vs. uniprot
Match: A0A427XTB9_9TREE (1-alkyl-2-acetylglycerophosphocholine esterase n=1 Tax=Apiotrichum porosum TaxID=105984 RepID=A0A427XTB9_9TREE)

HSP 1 Score: 89.4 bits (220), Expect = 5.830e-16
Identity = 59/163 (36.20%), Postives = 84/163 (51.53%), Query Frame = 1 
Query:  343 PGVPCFPAAPVARGRAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSSCMFPDGRITTYAKAPNL----KDVGAPENHAFRQVLAQLRRRGREIQLTRAHLAKLARGSATDLEACR----LVG-LGDVIDTKRPAFVGHSFGGGTVLQVLS 804
            P +P  PAA VA      P+V+FSHGL G R+ Y++      ++GYV + +EH DGSG  C+  DG+  T+ K        KD G+P          QL  R RE+    A   +L  GS  D+E       +VG L   +D      +GHSFGGGT++++L+
Sbjct:  116 PKMPVHPAAAVAPHNKPFPLVVFSHGLSGTRNTYSQMCQRLVSEGYVVLAVEHADGSGP-CVIRDGKSWTFTKLDETVWPEKDDGSPPYDRIDLRACQLDFRVREVYEAYAAFCRLMAGSQADMEIIEGSPEVVGALRGRVDIDNVKLMGHSFGGGTLMRLLT 277
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BLAST of mRNA_E-fasciculatus_F_contig1542.3795.1 vs. uniprot
Match: A0A0V1HNM5_9BILA (1-alkyl-2-acetylglycerophosphocholine esterase n=4 Tax=Trichinella TaxID=6333 RepID=A0A0V1HNM5_9BILA)

HSP 1 Score: 85.1 bits (209), Expect = 1.390e-14
Identity = 64/215 (29.77%), Postives = 103/215 (47.91%), Query Frame = 1 
Query:  388 AKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSSCMFPDGRITT-----YAKAPNLKDVGAPENHAFRQVLAQLRRRGRE-IQLTRAHLAKLARGSATDLEACRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRAGAKMDPEETETGYSMAFIMDAWTFPCSEEARAQGVDIPLVVMTNDNFLGSEGKKNEERLVN 1014
            AK P++IFSHGLGGNR +Y+   +  A+ GY+   +EH DGS S   + +   ++     Y +     +   P+   F    +QL++R  E I++    + K      T+L+      L   ID  R   VGHSFGG +V+  L+                  ++ +S   ++D W FP  +EA  + V  PL+ + N+ F   + K+N ER+ N
Sbjct:  108 AKYPLIIFSHGLGGNRLVYSAVCSELASHGYIVAAIEHRDGSASYTYYHELSESSDENEIYKEKDLFYETYEPKADVFEYRNSQLKKRVEECIKVKNYLITKDTLEHLTELQ-----NLKSHIDPTRIVAVGHSFGGASVIGSLA-----------------LDSDFSAGIVLDGWMFPVDKEAEDE-VQQPLLFVNNEKF---QWKENVERMQN 296
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1542.3795.1 vs. uniprot
Match: UPI0003F0DC0C (platelet-activating factor acetylhydrolase n=1 Tax=Elephantulus edwardii TaxID=28737 RepID=UPI0003F0DC0C)

HSP 1 Score: 84.7 bits (208), Expect = 2.180e-14
Identity = 73/252 (28.97%), Postives = 113/252 (44.84%), Query Frame = 1 
Query:  253 IAKFSKMPGFFTEHLCGFYGAGFESGHFHGPGVPCFPAAPVARGRAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSSCMFPDGRIT------TYAKAPNLKDVGAPENHAFRQVLAQLRRRGREIQLTRAHLAKLARGSA------TDLEACRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRAGAKMDPEETETGYSMAFIMDAWTFPCSEEARAQGVDIPLVVMTNDNF 972
            ++KF    GF  + L  F+G+           +P    +P+  G  K P+VIFSHGLG  R++Y+  G   A+ G++   +EH DGS S+  +    +       T+    +   V   E   FR    Q++RR +E     + +  L RG +      TD +  +L G    ID  + A +GHSFGG T +Q LS++R    R G  +DP               W  P  EE  ++ V  PL  + ++ F
Sbjct:  107 LSKFLGTHGFMAKLLKLFFGS---------KTIPAKWNSPLRTGE-KYPLVIFSHGLGALRTIYSAIGNDLASYGFIVAVVEHRDGSASATYYFKDELAVTKDDKTWLYVQDHLPVNESEKKCFRNW--QVKRRAQECSQALSLILDLDRGISVKNVLNTDFDMKQLKGS---IDRNKIAIIGHSFGGATTIQALSEDRR--FRCGIALDP---------------WMQPLGEEVYSR-VQQPLFFINSEQF 325
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1542.3795.1 vs. uniprot
Match: Q5M7T7_RAT (Platelet-activating factor acetylhydrolase n=6 Tax=Tetrapoda TaxID=32523 RepID=Q5M7T7_RAT)

HSP 1 Score: 84.0 bits (206), Expect = 3.660e-14
Identity = 76/252 (30.16%), Postives = 115/252 (45.63%), Query Frame = 1 
Query:  253 IAKFSKMPGFFTEHLCGFYGAGFESGHFHGPGVPCFPAAPVARGRAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSSCMFPDGRITTYAKAPN-----LKDVGAPENHAFRQVLAQLRRRGREIQLTRAHLAKLARGSATDLEACRLVGLG-------DVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRAGAKMDPEETETGYSMAFIMDAWTFPCSEEARAQGVDIPLVVMTNDNF 972
            ++KF   P F    L   YG+         P    FP     R   K P++IFSHGLG  R++Y+  GAA A+ G++   +EH DGS S+  + + +    AK  N     LK +   E+   R+   Q+R+R +E     + +  +  G+  +     ++GL        D ID  + A +GHSFGG TV Q LS+++    R G  +DP               W FP SEE  ++ V  PL  + +  F
Sbjct:  106 LSKFLGTPTFVGNILRLLYGS------LTAPASWNFPL----RTGEKYPLIIFSHGLGAFRTIYSAIGAALASYGFIVATVEHRDGSASATYYFEDQAA--AKMENRSWFYLKKIKQEESERARK--EQVRQRAKECSKALSAILDIEHGNPKE----NVLGLPFDMKQLKDSIDETKIAVMGHSFGGATVFQALSEDQR--FRCGIALDP---------------WMFPVSEELYSR-VPQPLFFINSAEF 321
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1542.3795.1 vs. uniprot
Match: A0A0L0SJJ5_ALLM3 (1-alkyl-2-acetylglycerophosphocholine esterase n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SJJ5_ALLM3)

HSP 1 Score: 84.0 bits (206), Expect = 5.090e-14
Identity = 66/218 (30.28%), Postives = 103/218 (47.25%), Query Frame = 1 
Query:  331 HFHGPGVPCFPAAPVARGRAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSSCMFPDGRITTYAKAPNLKDVGAPENHAFRQVLAQLRRRGREIQLTRAHLAKLARGSAT----DLEACRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRAGAKMDPEETETGYSMAFIMDAWTFPCSEEARAQGVDIPLVVMTNDNF 972
            H H P     P  PV    A+ P++IFSHGLGG +  Y+      A++G V V +EH DGS S  +        Y +      V   EN   R  + Q+  R  E++   A + + ARG +     D +      L   +D  +    GHSFGGGT + VL  +++R  R  A M+  + +  +   ++MD W F   ++   +GVD+PL+  + + F
Sbjct:  213 HVHEPPPTAAPIPPVP---AQFPVIIFSHGLGGTKGTYSYVCGELASRGAVVVAIEHRDGSASRSVERQQVEHAYQRI----GVTGEENRVLR--INQVHHRVVEVRAALALVRQWARGESPANQLDDKMHPWRALAGRMDLGQMMMAGHSFGGGTSVAVL--QQQRADRE-AGMNHGDAQMDFKAGYVMDPWLFAVDKK---KGVDVPLLSASTETF 415
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1542.3795.1 vs. uniprot
Match: A0A0V0RT15_9BILA (1-alkyl-2-acetylglycerophosphocholine esterase n=18 Tax=Trichinella TaxID=6333 RepID=A0A0V0RT15_9BILA)

HSP 1 Score: 82.8 bits (203), Expect = 8.280e-14
Identity = 64/215 (29.77%), Postives = 102/215 (47.44%), Query Frame = 1 
Query:  388 AKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSSCMFPDGRITT-----YAKAPNLKDVGAPENHAFRQVLAQLRRRGRE-IQLTRAHLAKLARGSATDLEACRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRAGAKMDPEETETGYSMAFIMDAWTFPCSEEARAQGVDIPLVVMTNDNFLGSEGKKNEERLVN 1014
            AK P++IFSHGLGGNR +Y+      A+ GY+   +EH DGS S   + +   ++     Y +     +   P+   F     QL++R  E I++    +AK      T+L+      L   ID  R   VGHSFGG +V+  L+                  ++ ++   ++D W FP  +EA  + V  PL+ + N+ F   + K+N ER+ N
Sbjct:  108 AKYPLIIFSHGLGGNRLVYSAVCTELASHGYIVAAIEHRDGSASYTYYHELSESSDENEIYKEKDLFFETYEPKADIFEYRNNQLKKRVEECIKVKNYLIAKDTLEHLTELK-----NLKSHIDPTRIVAVGHSFGGASVIGSLA-----------------LDSDFTAGIVLDGWMFPVDKEAENE-VQQPLLFVNNEKF---QWKENVERMQN 296
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1542.3795.1 vs. uniprot
Match: PAFA_MOUSE (Platelet-activating factor acetylhydrolase n=10 Tax=Mus TaxID=862507 RepID=PAFA_MOUSE)

HSP 1 Score: 82.4 bits (202), Expect = 1.200e-13
Identity = 66/217 (30.41%), Postives = 105/217 (48.39%), Query Frame = 1 
Query:  367 APVARGRAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSSCMFPDGRITTYAKAPN-----LKDVGAPENHAFRQVLAQLRRRGREIQLTRAHLAKL----------ARGSATDLEACRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRAGAKMDPEETETGYSMAFIMDAWTFPCSEEARAQGVDIPLVVMTNDNF 972
            +P+  G  K P+++FSHGLG  R++Y+  G   A+ G++   +EH D S S+  F + ++   AK  N     L+ V   E+ + R+   Q R     I+ +RA  A L            GSA D++  +     D ID  + A +GHSFGG TVLQ LS+++    R G  +DP               W +P +EE  ++ +  PL+ + +  F
Sbjct:  135 SPLRTGE-KYPLIVFSHGLGAFRTIYSAIGIGLASNGFIVATVEHRDRSASATYFFEDQVA--AKVENRSWLYLRKVKQEESESVRKEQVQQR----AIECSRALSAILDIEHGDPKENVLGSAFDMKQLK-----DAIDETKIALMGHSFGGATVLQALSEDQR--FRCGVALDP---------------WMYPVNEELYSRTLQ-PLLFINSAKF 321
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1542.3795.1 vs. uniprot
Match: A0A287BJE4_PIG (Platelet-activating factor acetylhydrolase n=57 Tax=Suidae TaxID=9821 RepID=A0A287BJE4_PIG)

HSP 1 Score: 82.4 bits (202), Expect = 1.210e-13
Identity = 65/214 (30.37%), Postives = 102/214 (47.66%), Query Frame = 1 
Query:  361 PAA---PVARGRAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSSCMFPDGRITTYAKAPN---LKDVGAPENHAFRQVLAQLRRRGREIQLTRAHLAKLARGSAT----DLEACRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRAGAKMDPEETETGYSMAFIMDAWTFPCSEEARAQGVDIPLVVMTNDNF 972
            PAA   P+  G  K P++IFSHGLG  R++Y+  G   A+ G++   +EH DGS S+  F   +     +      L+ +G  E   F     Q+R+R  E     + +  + RG +     DLE   +  L D ID  + A +GHSFGG TVLQ LS+++                  +     +DAW FP  +E  ++ +  PL  + +++F
Sbjct:  131 PAAWNSPLRTGE-KYPLIIFSHGLGAFRTIYSAIGTDLASYGFIVAAVEHRDGSASATYFFKDQSAAEIRNKTWLYLRTLGKGEEE-FPLRNEQVRQRAEECSQALSMILDMDRGKSVKNVLDLEF-DVEQLKDSIDRDKIAVMGHSFGGATVLQTLSEDQR-----------------FRCGIALDAWMFPVGDEVYSR-IPQPLFFINSEHF 323
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1542.3795.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKH9_ECTSI2.240e-21687.781-alkyl-2-acetylglycerophosphocholine esterase n=2... [more]
A0A835YXZ7_9STRA1.830e-2929.621-alkyl-2-acetylglycerophosphocholine esterase n=1... [more]
A0A427XTB9_9TREE5.830e-1636.201-alkyl-2-acetylglycerophosphocholine esterase n=1... [more]
A0A0V1HNM5_9BILA1.390e-1429.771-alkyl-2-acetylglycerophosphocholine esterase n=4... [more]
UPI0003F0DC0C2.180e-1428.97platelet-activating factor acetylhydrolase n=1 Tax... [more]
Q5M7T7_RAT3.660e-1430.16Platelet-activating factor acetylhydrolase n=6 Tax... [more]
A0A0L0SJJ5_ALLM35.090e-1430.281-alkyl-2-acetylglycerophosphocholine esterase n=2... [more]
A0A0V0RT15_9BILA8.280e-1429.771-alkyl-2-acetylglycerophosphocholine esterase n=1... [more]
PAFA_MOUSE1.200e-1330.41Platelet-activating factor acetylhydrolase n=10 Ta... [more]
A0A287BJE4_PIG1.210e-1330.37Platelet-activating factor acetylhydrolase n=57 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1542contigE-fasciculatus_F_contig1542:4..4323 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score612.8
Seed ortholog evalue1e-172
Seed eggNOG ortholog2880.D7FKH9
Preferred namePLA2G7
KEGG rclassRC00037,RC00094
KEGG koko:K01062
KEGG ReactionR04452
KEGG Pathwayko00565,ko01100,ko01110,ko01130,map00565,map01100,map01110,map01130
GOsGO:0002009,GO:0002682,GO:0002684,GO:0002685,GO:0002687,GO:0002688,GO:0002690,GO:0003674,GO:0003824,GO:0003847,GO:0004620,GO:0004623,GO:0005488,GO:0005543,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006952,GO:0006954,GO:0006979,GO:0007275,GO:0007596,GO:0007599,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009395,GO:0009611,GO:0009653,GO:0009790,GO:0009888,GO:0009987,GO:0010941,GO:0012505,GO:0016020,GO:0016042,GO:0016043,GO:0016298,GO:0016331,GO:0016787,GO:0016788,GO:0017144,GO:0019637,GO:0030258,GO:0030334,GO:0030335,GO:0031347,GO:0031349,GO:0031984,GO:0032101,GO:0032103,GO:0032501,GO:0032502,GO:0032879,GO:0032991,GO:0032994,GO:0033554,GO:0034358,GO:0034362,GO:0034367,GO:0034368,GO:0034369,GO:0034374,GO:0034440,GO:0034441,GO:0034599,GO:0040012,GO:0040017,GO:0042060,GO:0042175,GO:0042221,GO:0042981,GO:0043062,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046434,GO:0046469,GO:0046486,GO:0047499,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048598,GO:0048729,GO:0048856,GO:0050727,GO:0050729,GO:0050789,GO:0050794,GO:0050817,GO:0050878,GO:0050896,GO:0050920,GO:0050921,GO:0051270,GO:0051272,GO:0051716,GO:0052689,GO:0055114,GO:0060429,GO:0060548,GO:0065007,GO:0065008,GO:0070887,GO:0071675,GO:0071677,GO:0071704,GO:0071825,GO:0071827,GO:0071840,GO:0080134,GO:0090025,GO:0090026,GO:0097006,GO:0097164,GO:0098827,GO:1901564,GO:1901575,GO:1990777,GO:2000145,GO:2000147
EggNOG free text desc.1-alkyl-2-acetylglycerophosphocholine esterase activity
EggNOG OGsCOG4188@1,KOG3847@2759
EC3.1.1.47
COG Functional cat.B
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPlatelet-activating factor acetylhydrolase
Ec32 orthologEc-12_002000.1
Exons7
Model size1080
Cds size1080
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928019.8916469-CDS-E-fasciculatus_F_contig1542:3..2271622928019.8916469-CDS-E-fasciculatus_F_contig1542:3..227Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1542 4..227 +
1695995791.1604815-CDS-E-fasciculatus_F_contig1542:3..2271695995791.1604815-CDS-E-fasciculatus_F_contig1542:3..227Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1542 4..227 +
1622928019.905138-CDS-E-fasciculatus_F_contig1542:506..6101622928019.905138-CDS-E-fasciculatus_F_contig1542:506..610Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1542 507..610 +
1695995791.173598-CDS-E-fasciculatus_F_contig1542:506..6101695995791.173598-CDS-E-fasciculatus_F_contig1542:506..610Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1542 507..610 +
1622928019.9166973-CDS-E-fasciculatus_F_contig1542:1215..13611622928019.9166973-CDS-E-fasciculatus_F_contig1542:1215..1361Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1542 1216..1361 +
1695995791.182659-CDS-E-fasciculatus_F_contig1542:1215..13611695995791.182659-CDS-E-fasciculatus_F_contig1542:1215..1361Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1542 1216..1361 +
1622928019.9332016-CDS-E-fasciculatus_F_contig1542:2095..22351622928019.9332016-CDS-E-fasciculatus_F_contig1542:2095..2235Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1542 2096..2235 +
1695995791.193157-CDS-E-fasciculatus_F_contig1542:2095..22351695995791.193157-CDS-E-fasciculatus_F_contig1542:2095..2235Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1542 2096..2235 +
1622928019.953648-CDS-E-fasciculatus_F_contig1542:2753..28861622928019.953648-CDS-E-fasciculatus_F_contig1542:2753..2886Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1542 2754..2886 +
1695995791.2097676-CDS-E-fasciculatus_F_contig1542:2753..28861695995791.2097676-CDS-E-fasciculatus_F_contig1542:2753..2886Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1542 2754..2886 +
1622928019.9691956-CDS-E-fasciculatus_F_contig1542:3445..36431622928019.9691956-CDS-E-fasciculatus_F_contig1542:3445..3643Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1542 3446..3643 +
1695995791.2218199-CDS-E-fasciculatus_F_contig1542:3445..36431695995791.2218199-CDS-E-fasciculatus_F_contig1542:3445..3643Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1542 3446..3643 +
1622928019.981811-CDS-E-fasciculatus_F_contig1542:4188..43231622928019.981811-CDS-E-fasciculatus_F_contig1542:4188..4323Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1542 4189..4323 +
1695995791.2305021-CDS-E-fasciculatus_F_contig1542:4188..43231695995791.2305021-CDS-E-fasciculatus_F_contig1542:4188..4323Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1542 4189..4323 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1542.3795.1prot_E-fasciculatus_F_contig1542.3795.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1542 4..4323 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1542.3795.1

>prot_E-fasciculatus_F_contig1542.3795.1 ID=prot_E-fasciculatus_F_contig1542.3795.1|Name=mRNA_E-fasciculatus_F_contig1542.3795.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=360bp
TQRGVVGASIILGLEGYLRSDGAPSLGDLLRSSPSWSSLAGSAHAWTVSA
AVALCLVCLVSDLRTGLSRSAYQTRYLAREQARCIAKFSKMPGFFTEHLC
GFYGAGFESGHFHGPGVPCFPAAPVARGRAKRPMVIFSHGLGGNRSMYAE
HGAAYAAQGYVAVFLEHNDGSGSSCMFPDGRITTYAKAPNLKDVGAPENH
AFRQVLAQLRRRGREIQLTRAHLAKLARGSATDLEACRLVGLGDVIDTKR
PAFVGHSFGGGTVLQVLSDERERGSRAGAKMDPEETETGYSMAFIMDAWT
FPCSEEARAQGVDIPLVVMTNDNFLGSEGKKNEERLVNNAVRMVRDGAND
LTIQLRVKDA
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mRNA from alignment at E-fasciculatus_F_contig1542:4..4323+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1542.3795.1 ID=mRNA_E-fasciculatus_F_contig1542.3795.1|Name=mRNA_E-fasciculatus_F_contig1542.3795.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4320bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1542:4..4323+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ACACAGAGGGGCGTGGTTGGGGCGAGCATAATTCTGGGGTTGGAAGGCTA
CCTTCGGTCAGACGGGGCCCCTTCCCTGGGAGACCTGCTGCGGTCATCGC
CGTCGTGGTCGTCCCTCGCTGGTAGCGCCCACGCGTGGACCGTTTCCGCG
GCGGTGGCTTTGTGCTTGGTCTGCCTGGTGTCCGACTTGCGCACGGGGCT
GTCTCGCTCGGCGTACCAGACCAGGTGCGCCGTGAAACGCCCGAGGATGT
CATGCATGCGCGACGATCGGCGGCACCAGTAGCATCCCCGGGACGTGTGC
TCCCATCTCCAAACAGTTTTGGCGTTGTTGTTTCTTACCGCGCCTCGCTC
GTGCAAGGGAAGGGTGTTTTGAAGAGCACCTGTCTGCGTGTTGTTGTTTC
CACTGCAGGAGGCGTTTTGTTTGTTGCAACGGTTACCCGAAAAACAACCC
AAGAACTGCTGGAAAAGTTGATGTCGGTGCTGTGCTGGTGGTGATGGCCC
CAGGTATCTCGCCAGAGAGCAGGCCAGGTGCATCGCCAAGTTTTCCAAGA
TGCCGGGGTTTTTCACGGAGCACCTCTGCGGCTTCTACGGCGCCGGCTTC
GAGTCCGGTAAGTCCGTACAGCAGAGGGTACTCACAACCGTAGCGAGACC
CGCCTCCCAATCGATCCGTTTACGAGGACATGGTTGGATTTCCGGCTCGG
AACTTGGACGATAGGCGCGCTCGTTTGTTGCGGAGCACCTCAACATATTC
AGGGAGTAAGTACCACGCAGGAGAGGCACGGGATTTTTCTGCGGCAAGTT
GTATCGCTTGGATTGGAAGAGCTTTTTTTCCCATGGGTACAACATGAAGC
AAGCTCCAGGGGCGTGCGCCACCACTCGGTTTCGTGACATGGAGCAGCTA
CGTAGTAGTATGAACGGGATGACTCGATGTCAACTGTCCGTGGCGTTGTG
TGAGGAGAGGTGCGCATCAACTTTGTGGCGTTGGCACTCGGTACGCTGTA
CGGCGTGATCGACTTGGTTCGTTAGTGGTTCGAAAAGTCCACCGTTTTCT
CTGCGGGTGCTGCTGTACGAGGTACGCCATGAGGCGTGGTCGACTTGGTC
GTTATCTCTGCGGGTACTGCTGTACGAAACAAGCGTTACGCTGATCTATA
CATTTTATTTTGTGTTCTGTCAACCCTTGTGTGTAACTTCTCCCCGACGG
CACTGCTACCAGGACACTTTCACGGCCCAGGCGTACCGTGCTTTCCGGCA
GCCCCGGTCGCCCGGGGTAGGGCCAAGCGGCCGATGGTGATCTTTTCGCA
CGGGCTTGGCGGGAACCGCTCCATGTACGCCGAGCATGGCGCAGCGTATG
CCGCCCAAGTGAGTGGCAAGGGTTGGTGGTGGAGCAATGCTTGGAGCGAG
AGAGAGAGAGAGGGGGGGAGGGGGGCGAGAGGGAGGGTCTCGTAGACAGT
GAAAGTGCTGTCGAGCATGCAAGCGCTTTTTGCCAACGAGAGTCGCAGCT
ATTTCAGGTATCTCGCTAGCAATGGTTCTGCGCACACGATAAGCCGTAGC
GGGTTCATCTGCCGTCTGAAGCGGCAGGTCGAGCATAACACCCCTGCACC
TGTAAAGGTGCGACATTATCAGATGCATGCATCTGACAGCGGTTTTTGGT
GTGGTTCCTGTTTTCGTGATCCGCATTTTTATCTTACGACAATTTGTTCC
AACTCGCCTCCGTCTCTTTCTATGCCTTTTTTTTGTGATCTGTCTCTCTC
TCTCTCTCTTTTTCTCCTCCTCTCTTTTTCTCTTTCTCTCCCTTTCTCTT
TCTCTCTCTTTCTCTTTCTCTCTCTTTCTCTTTCTCTCTCTTTCTCTTTC
TCTCTCTTTCTCTTTCTCTCTCTCTCCTTCTCTCTCTCTCTCTCTTTGTC
CCTCTCTCTCTCTCTCTTTGTCCCTCTCTCTCTCTCTCTTTGTCCCTCTC
TGTCTCTCTTCCTCTCTTGGTTCTTATTTGTCACCCGCCACCTGATCTAC
ACGCGACTCATCGACTATTTTTTTGTTTACCCTCCCGTTTTCAACATACA
CCCTTTTTCACCGTCGCCGCTTGCCACAACGCCTAAACGAAGGGATACGT
GGCTGTTTTCCTCGAGCACAACGACGGCTCGGGCTCCAGCTGCATGTTCC
CCGACGGGCGCATCACGACATACGCCAAAGCCCCGAACTTGAAGGACGTG
GGCGCCCCAGAAAACCACGCCTTCCGGCAAGTGTGGCTTCCGGTCGTCTC
AAACAACGTTCTGCACGCGTCCCTCTGTCCGTTTGTTCGCCTTTTGTTGT
TGGTCTTATTTCCTCATGGTTGGCATGGTCCTCTTTCCTCTCCGAAGGTA
ATGTTCGGCGCACATGCCGTAGTCAGGAAGGACCCATTGTGGTCACCAAG
GGCCTGGGAAGTTGGGCTAACGGTAGCTGGAACTCCCCTCGCCGAGTGTC
CCTGTTACCGCTTGTTCAAACCCGCCACGAAGGAGTCCAAGCTCCCTCTC
GGTTGTTTGGTTGGTTGAATCGGTTCCACTCGAGGAGAAGGCGAAAAGGA
ACAAGTCTAGGAGCCCCCCCCTCTCTCTCTTTGTCTATCACGAGTGGGAT
CAACGATGCTGCTACGTCTCGAAATTGCACGGCCATACTTGTCGAACGAT
GCCATACGAGAGGCACGCTGCTCACCGACACCTTGTGGACAAGAAGGTAG
TTAATTCCCTTCCCCCTCCACCCTCCCCCTGCGCACCCCACTATTTGTAG
GCTGGCGCAACTGAGGCGCAGAGGAAGGGAAATTCAGCTCACGAGGGCTC
ACCTGGCGAAGCTCGCCCGCGGTTCTGCGACAGATTTGGAGGCCTGTCGA
CTAGTCGGGTTAGGGGATGTCATCGACACCAAGGTTCGGTTCTCGGGGGG
CGTTGCTTGATTTCGCCTTGACTCCATGCACTGGGTAATGCGTGTGTACA
CCCTGTTGTTCTCCTATAGACAACGGCGCGGTTTGTTGTGCTCGAGCATG
GTGTCTGGGATCGCTGGGGTTGTTGTTGGGTTCCCTTTTTGTCTCGTCTC
GTCTTGTCTCGTTTTTTGGGAGGCAATGGGGGTGTCATTCGGTTGCGCGC
TCACACAGCAGCGTTTGTGGCCCATGTGTTCCCAAGGGTGGCGTTTGTGT
AATGTAAGGACAAGGACAAGGACAAGGACGCAGGCCAAATTATGGGTTGG
CGGCGCCACAAACAGAGGGGCTTGCCTGTAGCCGCTGCGCCTGCCAGCTC
AACGGTGACACAAGACAGCATTGGAGGCAATATTTCTACACTATCAGCAG
GCCGTCCTTCCAACAGCAGTTCTCACAGGTCAGCATGGAGACATCACCGC
AAAGTCATCGACCTTGACACACGACCCCCCCCCCCCCCCCCCCCCCNNNN
NNNNNNGGGTACCATCCGCGTGGCCATAACTTTTCTCGCCAGCGGCCGGC
CTTCGTAGGGCACTCGTTCGGAGGGGGCACGGTTCTGCAGGTGCTTAGCG
ACGAGCGTGAGCGTGGCTCGAGAGCTGGCGCGAAGATGGACCCCGAGGAG
ACCGAGACCGGGTACTCGATGGCCTTCATCATGGACGCTTGGACGTTCCC
CTGCAGCGAAGAAGCGCGCGCCCAGGGCGTCGACATTCCGGTGCGTGGCT
GTGGCGGTGGCGGAGTAGGTGTGGGAAGGAAGGAAGGCACACGCGATGCC
TGCTGTGGGGGCGTTTTCGTGTGTCCGTGGTGTGGTGTGGTCGACGGTGT
TGGTTGTGTCTTTGTTGGCCGCTACAAGACCGGACGGTTGTCGTTCGACT
CATTAAGATCCACATCAAGGCGCCTGTTGCTAGCGTGTCTCATTCGTTCG
CTCCCGCAAGAGTTAGAACGGAATAGATTGGGGTTCTCCCTTTGTTCTCC
ACACGTACGCCACCTGTAGTAATTTGTGTGATCAATGACGCTTTCCGATT
GTCCATGGTAAACCCGACAGCACTCCTGCAGTTCCCCTAAGAAACGCCGA
CATTCCAGAAAAGGAACGCGAGCGCACCAATCATCGTCGAATGCTTGGGT
ACGTGGGCACTGGACTCTTCTGCTACTTGCTGTGGTTGCTCCGCGTGTTA
CTGTTTGTGGCTATGCTGTCTGTCGTGTGTCATCTGTTCAACACGTGGTG
TTTTGTGGCGCTCTTTTTCTGCCCACTCTACGCAGTTGGTTGTCATGACC
AATGATAACTTTCTTGGGTCCGAAGGCAAGAAGAACGAGGAACGCCTCGT
CAACAACGCCGTCCGTATGGTTCGAGATGGCGCCAACGACCTCACCATCC
AGCTCCGAGTCAAAGACGCC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1542:4..4323+

>mRNA_E-fasciculatus_F_contig1542.3795.1 ID=mRNA_E-fasciculatus_F_contig1542.3795.1|Name=mRNA_E-fasciculatus_F_contig1542.3795.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2160bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1542:4..4323+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ACACAGAGGGGCGTGGTTGGGGCGAGCATAATTCTGGGGTTGGAAGGCTA
CCTTCGGTCAGACGGGGCCCCTTCCCTGGGAGACCTGCTGCGGTCATCGC
CGTCGTGGTCGTCCCTCGCTGGTAGCGCCCACGCGTGGACCGTTTCCGCG
GCGGTGGCTTTGTGCTTGGTCTGCCTGGTGTCCGACTTGCGCACGGGGCT
GTCTCGCTCGGCGTACCAGACCAGACACAGAGGGGCGTGGTTGGGGCGAG
CATAATTCTGGGGTTGGAAGGCTACCTTCGGTCAGACGGGGCCCCTTCCC
TGGGAGACCTGCTGCGGTCATCGCCGTCGTGGTCGTCCCTCGCTGGTAGC
GCCCACGCGTGGACCGTTTCCGCGGCGGTGGCTTTGTGCTTGGTCTGCCT
GGTGTCCGACTTGCGCACGGGGCTGTCTCGCTCGGCGTACCAGACCAGGT
ATCTCGCCAGAGAGCAGGCCAGGTGCATCGCCAAGTTTTCCAAGATGCCG
GGGTTTTTCACGGAGCACCTCTGCGGCTTCTACGGCGCCGGCTTCGAGTC
CGGTATCTCGCCAGAGAGCAGGCCAGGTGCATCGCCAAGTTTTCCAAGAT
GCCGGGGTTTTTCACGGAGCACCTCTGCGGCTTCTACGGCGCCGGCTTCG
AGTCCGGACACTTTCACGGCCCAGGCGTACCGTGCTTTCCGGCAGCCCCG
GTCGCCCGGGGTAGGGCCAAGCGGCCGATGGTGATCTTTTCGCACGGGCT
TGGCGGGAACCGCTCCATGTACGCCGAGCATGGCGCAGCGTATGCCGCCC
AAGACACTTTCACGGCCCAGGCGTACCGTGCTTTCCGGCAGCCCCGGTCG
CCCGGGGTAGGGCCAAGCGGCCGATGGTGATCTTTTCGCACGGGCTTGGC
GGGAACCGCTCCATGTACGCCGAGCATGGCGCAGCGTATGCCGCCCAAGG
ATACGTGGCTGTTTTCCTCGAGCACAACGACGGCTCGGGCTCCAGCTGCA
TGTTCCCCGACGGGCGCATCACGACATACGCCAAAGCCCCGAACTTGAAG
GACGTGGGCGCCCCAGAAAACCACGCCTTCCGGCAAGTGGATACGTGGCT
GTTTTCCTCGAGCACAACGACGGCTCGGGCTCCAGCTGCATGTTCCCCGA
CGGGCGCATCACGACATACGCCAAAGCCCCGAACTTGAAGGACGTGGGCG
CCCCAGAAAACCACGCCTTCCGGCAAGTGCTGGCGCAACTGAGGCGCAGA
GGAAGGGAAATTCAGCTCACGAGGGCTCACCTGGCGAAGCTCGCCCGCGG
TTCTGCGACAGATTTGGAGGCCTGTCGACTAGTCGGGTTAGGGGATGTCA
TCGACACCAAGGCTGGCGCAACTGAGGCGCAGAGGAAGGGAAATTCAGCT
CACGAGGGCTCACCTGGCGAAGCTCGCCCGCGGTTCTGCGACAGATTTGG
AGGCCTGTCGACTAGTCGGGTTAGGGGATGTCATCGACACCAAGCGGCCG
GCCTTCGTAGGGCACTCGTTCGGAGGGGGCACGGTTCTGCAGGTGCTTAG
CGACGAGCGTGAGCGTGGCTCGAGAGCTGGCGCGAAGATGGACCCCGAGG
AGACCGAGACCGGGTACTCGATGGCCTTCATCATGGACGCTTGGACGTTC
CCCTGCAGCGAAGAAGCGCGCGCCCAGGGCGTCGACATTCCGCGGCCGGC
CTTCGTAGGGCACTCGTTCGGAGGGGGCACGGTTCTGCAGGTGCTTAGCG
ACGAGCGTGAGCGTGGCTCGAGAGCTGGCGCGAAGATGGACCCCGAGGAG
ACCGAGACCGGGTACTCGATGGCCTTCATCATGGACGCTTGGACGTTCCC
CTGCAGCGAAGAAGCGCGCGCCCAGGGCGTCGACATTCCGTTGGTTGTCA
TGACCAATGATAACTTTCTTGGGTCCGAAGGCAAGAAGAACGAGGAACGC
CTCGTCAACAACGCCGTCCGTATGGTTCGAGATGGCGCCAACGACCTCAC
CATCCAGCTCCGAGTCAAAGACGCCTTGGTTGTCATGACCAATGATAACT
TTCTTGGGTCCGAAGGCAAGAAGAACGAGGAACGCCTCGTCAACAACGCC
GTCCGTATGGTTCGAGATGGCGCCAACGACCTCACCATCCAGCTCCGAGT
CAAAGACGCC
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