mRNA_E-fasciculatus_F_contig1541.3793.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1541.3793.1 vs. uniprot
Match: D7G7C1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7C1_ECTSI) HSP 1 Score: 601 bits (1550), Expect = 3.450e-197 Identity = 436/627 (69.54%), Postives = 449/627 (71.61%), Query Frame = 3
Query: 747 QSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIMQLVEHHGKKWSVIATQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVQEEEVLVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQREISRASTSSTAA-ATETPPIVVQRTTRPFPISMSPHLARILPAPAPPVFVSAPSAAAAPVXXXXXXXXXXXXXXXXXXXXXXXXXADIPPLIEQRQVLSESEDGXXXXXXXXXVGEVLLERPQESPTSAAPGAPVDSHFLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLLQQPAGDYDPTHVAGSGGXXXXXXXXXXXXXXGSIDDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTDAGGDMVGPVPTAEEEVDPGQDFGLPLAKRARIDGGDHSGGGGG--DAGGEGHDMLIGGSGVGSVGVSDVEDENTVADSFVGSGFGSDEHAAVGAGXXXXXXXDGGRIDDDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---SASAVARLEEHH---AGIGSDGEDGHNGVDGGDADCVFSGWDRLRNE 2600
QSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERI+QLVEHHGKKWSVIA+QLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSV+EEE+LVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQREISRASTSSTAA AT TPPIVVQRT RPFP+S +P+L RQVLSES+ G VG VLLERPQE P SAAPG P D HFLGG GLLLQQPAGDYDPTHVAGSGGXXXXXXXXXXXXXX +DDH XXXXXXXXXXXXXXXXXXXXXXXXXGTDAGG +VGPVP+AEEEVDP QDFGLPLAKRARIDGGD D GGEGHDMLI GSGV SVGV DVEDENTVADSFVGSGFGSD+HAAV AGXXXXXXX RIDDDV XXXXXXXXXXXXX XXXXXXXXXXXX S SA ARLEEHH AGIGSDGE GH+GVDGGDADCVF GWDRLR E
Sbjct: 369 QSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIIQLVEHHGKKWSVIASQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVEEEEILVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQREISRASTSSTAATATGTPPIVVQRTARPFPMSANPYL---------------------------------------------------------RQVLSESKHGGEHHHSGG-VGGVLLERPQEPPISAAPGGPGDGHFLGGVVVDCGGAPEQHEESVEVEDRHRDGSIDD--GLLLQQPAGDYDPTHVAGSGGXXXXXXXXXXXXXX-XMDDHDHGDMMXXXXXXXXXXXXXXXXXXXXXXXXXGTDAGGVLVGPVPSAEEEVDPEQDFGLPLAKRARIDGGDXXXXXXXXXDPGGEGHDMLIDGSGVSSVGVGDVEDENTVADSFVGSGFGSDDHAAVDAGXXXXXXXXXXRIDDDVVGAGSGVMDHFGAXXXXXXXXXXXXXGGLERFEDAGTIGDGDXXXXXXXXXXXXVDNGGGSPSAAARLEEHHRHHAGIGSDGEGGHDGVDGGDADCVFPGWDRLRTE 934
BLAST of mRNA_E-fasciculatus_F_contig1541.3793.1 vs. uniprot
Match: A0A6H5KNI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI5_9PHAE) HSP 1 Score: 426 bits (1095), Expect = 2.500e-134 Identity = 414/640 (64.69%), Postives = 425/640 (66.41%), Query Frame = 3
Query: 711 MPPVVYHRWTQEQSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIMQLVEHHGKKWSVIATQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVQEEEVLVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQREISRASTSSTA-AATETPPIVVQRTTRPFPISMSPHLARILPAPAPPVFVSAPSAAAAPVXXXXXXXXXXXXXXXXXXXXXXXXXADIPPLIEQRQVLSESEDGXXXXXXXXXVGEVLLERPQESPTSAAPGAPVDSHFLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLLQQPAGDYDPTHVAGSGGXXXXXXXXXXXXXXGSIDDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTDAGGDMVGPVPTAEEEVDPGQDFGLPLAKRARIDGGDHSGGGGGDA---GGEGHDMLIGGSGVGSVGVSDVEDENTVADSFVGSGFGSDEHAAVGAGXXXXXXXDGGRIDDDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---SASAVARLEEHH---AGIGSDGEDGHNGVDGGDADCVFSGWDRLRNE 2600
MPPVVY RWTQEQSLRLRQLVEER+LVVGTSGAKDWTNIARK LVEHHGKKWSVIA+QLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSV+E VR W + LP + + YAHERRQREISRAS SST AATETPPIVVQRT RPFP+S +P+LARILPAP PPV VSAP AA+ PV XXXXXXXXXXXXXXXXXXXXXXX DIPPLIEQRQVLSESEDGXXXXXXXXX D HFLG XXXXXXXX GLLLQQPAGDYDPTHVAGSGG XXXXXXXXXXG IDDH XXXXXXXXXXXXXXXXXXXXXXXXXGTDAGG MVGPV TAEEEVDPGQDFGLPLAKRARIDGGD GGEGH MLI GSGVGS GV DVEDENTVADSFVGSGFGSDEH AV AG XXXXXX G RIDDDV XXXXX XXXXXXXXXXXXX S SAVARLEEHH AGIGSD GDADCVF GWDRLR+E
Sbjct: 1 MPPVVYQRWTQEQSLRLRQLVEERRLVVGTSGAKDWTNIARK--------------------------------------LVEHHGKKWSVIASQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVEE----VR--------WLSVI--LPVHIPVPV-HMLYAHERRQREISRASASSTXXAATETPPIVVQRTARPFPMSANPYLARILPAPPPPVLVSAPLAAS-PVASXXXXXXXXXXXXXXXXXXXXXXX-DIPPLIEQRQVLSESEDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-DCHFLG--XXXXXXXXAPEQHEESVEVEDRHGDGSIDDGLLLQQPAGDYDPTHVAGSGGDGGHXXXXXXXXXXG-IDDHDHGDMMXXXXXXXXXXXXXXXXXXXXXXXXXGTDAGGVMVGPVATAEEEVDPGQDFGLPLAKRARIDGGDXXXXXXXXXXXPGGEGHHMLIDGSGVGSAGVGDVEDENTVADSFVGSGFGSDEHPAVDAGGXXXXXX-GDRIDDDVVGAGSGVMDHFSATEIGXXXXXGEDGGGLERFEQAGTIGDGXXXXXXXXXXXXXVDNGGGSLSAVARLEEHHRHHAGIGSDXXXXXXXXXXGDADCVFPGWDRLRSE 580
BLAST of mRNA_E-fasciculatus_F_contig1541.3793.1 vs. uniprot
Match: UPI002025CB90 (transcriptional activator Myb isoform X2 n=1 Tax=Sphaerodactylus townsendi TaxID=933632 RepID=UPI002025CB90) HSP 1 Score: 158 bits (399), Expect = 1.000e-36 Identity = 91/209 (43.54%), Postives = 128/209 (61.24%), Query Frame = 3
Query: 732 RWTQEQSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIMQLVEHHG-KKWSVIATQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVQEEEVLVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQ-------REISRASTSSTAAA----------TETPPIVVQRTT 1304
RWT+E+ +L+QLVE+ +G +DW IA +P +TD+QC W V+NPEL KG W +EED+R+++LV+ +G K+WSVIA LK R+GKQ RER+ +HL+P +KK W+ +E+ ++ + H N+WA+IAK LPGR N IKNHW + RR+ +E S+AS SS AA+ T TPP V TT
Sbjct: 42 RWTREEDEKLKQLVEQ-------NGTEDWKVIANFLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHLKG------RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKASQSSVAASFQKSNHLMGYTPTPPSVQLPTT 235
BLAST of mRNA_E-fasciculatus_F_contig1541.3793.1 vs. uniprot
Match: A0A8C0H5G6_CHEAB (MYB proto-oncogene, transcription factor n=2 Tax=Chelonoidis abingdonii TaxID=106734 RepID=A0A8C0H5G6_CHEAB) HSP 1 Score: 152 bits (385), Expect = 1.460e-36 Identity = 81/187 (43.32%), Postives = 120/187 (64.17%), Query Frame = 3
Query: 732 RWTQEQSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIMQLVEHHG-KKWSVIATQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVQEEEVLVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQ-------REISRASTSSTAAA 1268
RWT+E+ +L++LVE+ +G +DW IA +P +TD+QC W V+NPEL KG W +EED+R+++LV+ +G K+WSVIA LK R+GKQ RER+ +HL+P +KK W+ +E+ ++ + H N+WA+IAK LPGR N IKNHW + RR+ +E S+A+ SS A +
Sbjct: 42 RWTREEDEKLKKLVEQ-------NGTEDWKVIANFLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHLKG------RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKANQSSLAGS 213
BLAST of mRNA_E-fasciculatus_F_contig1541.3793.1 vs. uniprot
Match: UPI000848E8B2 (myb-related protein 3R-1 n=1 Tax=Theobroma cacao TaxID=3641 RepID=UPI000848E8B2) HSP 1 Score: 150 bits (378), Expect = 1.800e-36 Identity = 78/172 (45.35%), Postives = 106/172 (61.63%), Query Frame = 3
Query: 735 WTQEQSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIMQLVEHHGKK-WSVIATQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVQEEEVLVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQREISRAS 1247
WT+E+ L V++ K+W IA +P +TD+QC+ W V+NP+L KG W +EEDE I +LVE GKK WS IA L R+GKQ RER+ +HL+P++KK W+ +EE VL+R HG + N+WA+IAK LPGR N IKNHW +++ EI AS
Sbjct: 45 WTEEEDKMLTTAVQK-------FNGKNWKKIAECVPDRTDVQCLHRWQKVLNPDLVKGP--WSKEEDELIFELVEKQGKKKWSEIAKYLPG------RIGKQCRERWFNHLNPDIKKTAWTEEEELVLIRAHGTYGNRWAEIAKLLPGRTENSIKNHWNCSVKKKVEILAAS 201
BLAST of mRNA_E-fasciculatus_F_contig1541.3793.1 vs. uniprot
Match: P10242-12 (Isoform 12 of Transcriptional activator Myb n=7 Tax=Hominidae TaxID=9604 RepID=P10242-12) HSP 1 Score: 150 bits (380), Expect = 1.910e-36 Identity = 76/168 (45.24%), Postives = 110/168 (65.48%), Query Frame = 3
Query: 732 RWTQEQSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIMQLVEHHG-KKWSVIATQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVQEEEVLVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQRE 1232
RWT+E+ +L++LVE+ +G DW IA +P +TD+QC W V+NPEL KG W +EED+R+++LV+ +G K+WSVIA LK R+GKQ RER+ +HL+P +KK W+ +E+ ++ + H N+WA+IAK LPGR N IKNHW + RR+ E
Sbjct: 42 RWTREEDEKLKKLVEQ-------NGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHLKG------RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 194
BLAST of mRNA_E-fasciculatus_F_contig1541.3793.1 vs. uniprot
Match: A0A2K6DQZ6_MACNE (MYB proto-oncogene, transcription factor n=6 Tax=Boreoeutheria TaxID=1437010 RepID=A0A2K6DQZ6_MACNE) HSP 1 Score: 150 bits (380), Expect = 3.010e-36 Identity = 76/168 (45.24%), Postives = 110/168 (65.48%), Query Frame = 3
Query: 732 RWTQEQSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIMQLVEHHG-KKWSVIATQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVQEEEVLVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQRE 1232
RWT+E+ +L++LVE+ +G DW IA +P +TD+QC W V+NPEL KG W +EED+R+++LV+ +G K+WSVIA LK R+GKQ RER+ +HL+P +KK W+ +E+ ++ + H N+WA+IAK LPGR N IKNHW + RR+ E
Sbjct: 42 RWTREEDEKLKKLVEQ-------NGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHLKG------RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 194
BLAST of mRNA_E-fasciculatus_F_contig1541.3793.1 vs. uniprot
Match: A0A2K5ZVK3_MANLE (MYB proto-oncogene, transcription factor n=8 Tax=Catarrhini TaxID=9526 RepID=A0A2K5ZVK3_MANLE) HSP 1 Score: 150 bits (380), Expect = 3.080e-36 Identity = 76/168 (45.24%), Postives = 110/168 (65.48%), Query Frame = 3
Query: 732 RWTQEQSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIMQLVEHHG-KKWSVIATQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVQEEEVLVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQRE 1232
RWT+E+ +L++LVE+ +G DW IA +P +TD+QC W V+NPEL KG W +EED+R+++LV+ +G K+WSVIA LK R+GKQ RER+ +HL+P +KK W+ +E+ ++ + H N+WA+IAK LPGR N IKNHW + RR+ E
Sbjct: 43 RWTREEDEKLKKLVEQ-------NGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHLKG------RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 195
BLAST of mRNA_E-fasciculatus_F_contig1541.3793.1 vs. uniprot
Match: A0A0A9H4S3_ARUDO (Uncharacterized protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9H4S3_ARUDO) HSP 1 Score: 145 bits (366), Expect = 3.260e-36 Identity = 75/151 (49.67%), Postives = 99/151 (65.56%), Query Frame = 3
Query: 810 KDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIMQLVEHHG-KKWSVIATQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVQEEEVLVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQREISRASTSST 1259
+ W IA P KT++QC+ W V+NPEL KG W QEED+ I+ +V+ HG KKWSVIA L R+GKQ RER+ +HLDP ++K W+V+EE VLV HG++ N WA+IAK LPGR N IKNHW + R++ + +TSST
Sbjct: 7 RQWKKIAESFPDKTEVQCLHRWQKVLNPELIKGP--WTQEEDDIIINMVKLHGPKKWSVIARSLDG------RIGKQCRERWHNHLDPQIRKEAWTVEEERVLVDVHGVYGNNWAEIAKLLPGRTDNSIKNHWNSSLRKR--LDDYNTSST 147
BLAST of mRNA_E-fasciculatus_F_contig1541.3793.1 vs. uniprot
Match: Q708E6_HUMAN (C-myb v-myb myeloblastosis viral oncogene homologue (avian), exon 1 and joined CDS n=4 Tax=Hominidae TaxID=9604 RepID=Q708E6_HUMAN) HSP 1 Score: 150 bits (380), Expect = 3.380e-36 Identity = 76/168 (45.24%), Postives = 110/168 (65.48%), Query Frame = 3
Query: 732 RWTQEQSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIMQLVEHHG-KKWSVIATQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVQEEEVLVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQRE 1232
RWT+E+ +L++LVE+ +G DW IA +P +TD+QC W V+NPEL KG W +EED+R+++LV+ +G K+WSVIA LK R+GKQ RER+ +HL+P +KK W+ +E+ ++ + H N+WA+IAK LPGR N IKNHW + RR+ E
Sbjct: 42 RWTREEDEKLKKLVEQ-------NGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHLKG------RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 194 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1541.3793.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1541.3793.1 >prot_E-fasciculatus_F_contig1541.3793.1 ID=prot_E-fasciculatus_F_contig1541.3793.1|Name=mRNA_E-fasciculatus_F_contig1541.3793.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=635bp MPPVVYHRWTQEQSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQback to top mRNA from alignment at E-fasciculatus_F_contig1541:11427..17544- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1541.3793.1 ID=mRNA_E-fasciculatus_F_contig1541.3793.1|Name=mRNA_E-fasciculatus_F_contig1541.3793.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=6118bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1541:11427..17544- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1541:11427..17544- >mRNA_E-fasciculatus_F_contig1541.3793.1 ID=mRNA_E-fasciculatus_F_contig1541.3793.1|Name=mRNA_E-fasciculatus_F_contig1541.3793.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3810bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1541:11427..17544- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |