mRNA_E-fasciculatus_F_contig15407.3790.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig15407.3790.1
Unique NamemRNA_E-fasciculatus_F_contig15407.3790.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig15407.3790.1 vs. uniprot
Match: D7FRG3_ECTSI (PObg2, plastid Obg/CgtA-like GTPase 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRG3_ECTSI)

HSP 1 Score: 371 bits (952), Expect = 1.970e-124
Identity = 187/191 (97.91%), Postives = 190/191 (99.48%), Query Frame = 1 
Query:    1 FQIPVPPGTVVKDRDNGGVVLGELREGGERLVVAKGGYGGRGNAATKITRGQAPKASPPGAGERRWLSLELRLVADVGLVGVPSAGKSTLLAASTNAKPKIADYPFTTLVPNLGVCDPEALGFKGKGMVLADIPGLLEGAHKGVGLGRAFLRHVERCRAIIHIVSGASPDPVGDFRAINQELALFSEALAV 573
             ++PVPPGTVVKDRDNGGVVLGELREGGERLVVAKGG+GGRGNAATKITRGQAPKASPPGAGERRWLSLELRLVADVGLVGVPSAGKSTLLAASTNAKPKIADYPFTTLVPNLGVCDPEALGFKGKGMVLADIPGLLEGAHKGVGLGRAFLRHVERCRAIIHIVSGASPDPVGDFRAINQELALFSEALAV
Sbjct:  199 IEVPVPPGTVVKDRDNGGVVLGELREGGERLVVAKGGFGGRGNAATKITRGQAPKASPPGAGERRWLSLELRLVADVGLVGVPSAGKSTLLAASTNAKPKIADYPFTTLVPNLGVCDPEALGFKGKGMVLADIPGLLEGAHKGVGLGRAFLRHVERCRAIIHIVSGASPDPVGDFRAINQELALFSEALAV 389
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BLAST of mRNA_E-fasciculatus_F_contig15407.3790.1 vs. uniprot
Match: A0A836CHG5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHG5_9STRA)

HSP 1 Score: 294 bits (752), Expect = 1.050e-92
Identity = 150/193 (77.72%), Postives = 168/193 (87.05%), Query Frame = 1 
Query:    7 IPVPPGTVVKDRDNGGVVLGELREGGERLVVAKGGYGGRGNAATKITRGQAPKASPPGAGERRWLSLELRLVADVGLVGVPSAGKSTLLAASTNAKPKIADYPFTTLVPNLGVCDPEALGFKGKGMVLADIPGLLEGAHKGVGLGRAFLRHVERCRAIIHIVSGASPDPVGDFRAINQELALFSEALAVKPQV 585
            + VP GT+V D D G  +LGEL+  G+RL+VAKGG GGRGNA+ K+TRG AP+A+PP  GERR L LELRLVADVGLVGVP+AGKSTLLAA++NA+PKIADYPFTTLVPNLGVCDP ALGF G+GMVLADIPGLLEGAH+GVGLG AFLRHVERCR IIH+VSGAS DPVGD+ AINQELALFS  LA KPQV
Sbjct:  313 VKVPAGTIVADMDTG-AILGELKSPGDRLIVAKGGEGGRGNASQKVTRGTAPRATPPSPGERRQLKLELRLVADVGLVGVPNAGKSTLLAAASNARPKIADYPFTTLVPNLGVCDPLALGFVGRGMVLADIPGLLEGAHRGVGLGPAFLRHVERCRLIIHVVSGASTDPVGDYVAINQELALFSADLARKPQV 504
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BLAST of mRNA_E-fasciculatus_F_contig15407.3790.1 vs. uniprot
Match: A0A835YRC8_9STRA (GTP1/OBG-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRC8_9STRA)

HSP 1 Score: 248 bits (633), Expect = 3.010e-77
Identity = 131/195 (67.18%), Postives = 155/195 (79.49%), Query Frame = 1 
Query:    7 IPVPPGTVVKDRDNGGVVLGELREGGERLVVAKGGYGGRGNAATKITRGQAPKASPPGA-GERRWLSLELRLVADVGLVGVPSAGKSTLLAASTNAKPKIADYPFTTLVPNLGVCDPEA-LGFKGKGMVLADIPGLLEGAHKGVGLGRAFLRHVERCRAIIHIVSGASPDPVGDFRAINQELALFSEALAVKPQV 585
            + VPPGTV++D+D  GV+ GE+ + GE LVVAKGG GGRGN A K  R  APK    G  G  RWL+LEL+LVADVGL+GVP+AGKSTLLAA +NAKPKIADYPFTT++PNLGV +  A +G   KG+VLADIPGLLEGAH GVGLG AFLRHV+RCR ++H+V+G SPDP+GDF AI QEL LF+  LA KPQV
Sbjct:  125 VRVPPGTVIRDQD--GVLCGEVTDHGEELVVAKGGRGGRGNLAFKTDRNNAPKFMEVGEKGSMRWLTLELKLVADVGLIGVPNAGKSTLLAAVSNAKPKIADYPFTTVIPNLGVWEESAEVGGSPKGLVLADIPGLLEGAHMGVGLGLAFLRHVQRCRVLVHVVNGDSPDPLGDFEAIQQELELFNIKLAGKPQV 317
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BLAST of mRNA_E-fasciculatus_F_contig15407.3790.1 vs. uniprot
Match: A0A0G4ENM0_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ENM0_VITBC)

HSP 1 Score: 249 bits (635), Expect = 1.720e-75
Identity = 132/194 (68.04%), Postives = 154/194 (79.38%), Query Frame = 1 
Query:   13 VPPGTVVKDRDNGGVVLGELREGGERLVVAKGGYGGRGNAATKITRGQAPKASPPGA-GERRWLSLELRLVADVGLVGVPSAGKSTLLAASTNAKPKIADYPFTTLVPNLGVCD-PEALGF-KGKGMVLADIPGLLEGAHKGVGLGRAFLRHVERCRAIIHIVSGASPDPVGDFRAINQELALFSEALAVKPQV 585
            VPPGTVV+D +  G + GELR  G+RL VA+GG GGRGNA+ K     APK +  G  G  RW++LEL++VADVGLVG P+AGKSTLL+  +NAKPKIADYPFTT+VPNLGVCD PE L    G+GMVLADIPGLLEGAH+GVGLG AFLRHVERC+ I+HI++G SPDPVGDF AINQEL  F+  LA KPQV
Sbjct:  303 VPPGTVVRDEE--GRLAGELRRQGDRLTVARGGRGGRGNASFKTQANNAPKLAEKGERGTCRWINLELKIVADVGLVGCPNAGKSTLLSVVSNAKPKIADYPFTTVVPNLGVCDMPEVLSAGDGRGMVLADIPGLLEGAHRGVGLGMAFLRHVERCKIILHIINGDSPDPVGDFHAINQELLFFNPQLAKKPQV 494
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BLAST of mRNA_E-fasciculatus_F_contig15407.3790.1 vs. uniprot
Match: A0A7S2CMR3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMR3_9STRA)

HSP 1 Score: 242 bits (617), Expect = 4.140e-75
Identity = 124/196 (63.27%), Postives = 154/196 (78.57%), Query Frame = 1 
Query:    7 IPVPPGTVVKDRDNGGVVLGELREGGERLVVAKGGYGGRGNAATKITRGQAPKASPPG-AGERRWLSLELRLVADVGLVGVPSAGKSTLLAASTNAKPKIADYPFTTLVPNLGVCD--PEALGFKGKGMVLADIPGLLEGAHKGVGLGRAFLRHVERCRAIIHIVSGASPDPVGDFRAINQELALFSEALAVKPQV 585
            +PVPPGTV++D +  G + GEL + G+R+ V +GG GGRGN + K  R  AP+ +  G  G   WLS+ELRLVADVGLVGVP+AGKSTLL+A++NA+PKIADYPFTT+VPNLGVCD  P+      KG+VLADIPGLLEGAH GVG+G AFLRHV RC+ +IH+V+GA+ DP+GDF AIN EL LF+  LA+KPQV
Sbjct:   62 VPVPPGTVIRDIE--GRLAGELVKDGDRICVGRGGIGGRGNLSFKTPRSNAPRLAEAGDPGAEHWLSIELRLVADVGLVGVPNAGKSTLLSAASNARPKIADYPFTTVVPNLGVCDILPQDSEESHKGLVLADIPGLLEGAHDGVGMGLAFLRHVSRCKVLIHVVNGAAEDPIGDFEAINTELRLFNPQLALKPQV 255
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BLAST of mRNA_E-fasciculatus_F_contig15407.3790.1 vs. uniprot
Match: A0A540VF84_9CHLR (GTPase Obg n=1 Tax=Litorilinea aerophila TaxID=1204385 RepID=A0A540VF84_9CHLR)

HSP 1 Score: 237 bits (604), Expect = 1.280e-73
Identity = 123/196 (62.76%), Postives = 153/196 (78.06%), Query Frame = 1 
Query:    1 FQIPVPPGTVVKDRDNGGVVLGELREGGERLVVAKGGYGGRGNAATKITRGQAPKASPPG-AGERRWLSLELRLVADVGLVGVPSAGKSTLLAASTNAKPKIADYPFTTLVPNLGVCDPEALGFKGKGMVLADIPGLLEGAHKGVGLGRAFLRHVERCRAIIHIVSGASPDPVGDFRAINQELALFSEALAVKPQV 585
             +IPVPPGT+V+D + G  VL +L   G+ ++VA+GG GGRGN A K +R Q P+ +  G AG+ RWL LEL+LVADVG+VGVP+AGKSTLL+  + AKPKIADYPFTT+VPNLGV + +      + MVLADIPGLLEGAH GVGLG  FLRH+ER R +IH+++GASPDP+GDF AINQEL LF+ ALA KPQ+
Sbjct:   85 LRIPVPPGTLVRDAETG-EVLADLTRPGQEVLVARGGRGGRGNVAFKSSRNQTPRLAEKGEAGQERWLELELKLVADVGIVGVPNAGKSTLLSVVSAAKPKIADYPFTTVVPNLGVAEVDH-----RQMVLADIPGLLEGAHDGVGLGLEFLRHIERTRVLIHLLNGASPDPLGDFEAINQELVLFNPALADKPQI 274
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BLAST of mRNA_E-fasciculatus_F_contig15407.3790.1 vs. uniprot
Match: A0A7S2RXC1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RXC1_9STRA)

HSP 1 Score: 239 bits (609), Expect = 1.970e-72
Identity = 129/194 (66.49%), Postives = 147/194 (75.77%), Query Frame = 1 
Query:    7 IPVPPGTVVKDRDNGGVVLGELREGGERLVVAKGGYGGRGNAATKITRGQAPKASPPGA-GERRWLSLELRLVADVGLVGVPSAGKSTLLAASTNAKPKIADYPFTTLVPNLGVCDPEALGFKGKGMVLADIPGLLEGAHKGVGLGRAFLRHVERCRAIIHIVSGASPDPVGDFRAINQELALFSEALAVKPQV 585
            IPVP GTVVKD +  G   GEL   GERL VA GG GGRGN A K  +  AP+ +  G  G   WL++ELRLVADVG VGVP+AGKSTLLAA TNAKPKIA+YPFTT+VPNLGVCD   +   G G+VLADIPGLLEGAH GVG+G AFLRHV RCR ++H+VSG S DPVGDF+AIN+EL LF+  LA K QV
Sbjct:  177 IPVPAGTVVKDFE--GRFAGELVSKGERLCVAPGGRGGRGNQAFKTPKNNAPRLAERGEPGVEHWLNVELRLVADVGFVGVPNAGKSTLLAAVTNAKPKIANYPFTTVVPNLGVCDLLDVSQPGSGLVLADIPGLLEGAHSGVGMGLAFLRHVARCRVLLHVVSGDSEDPVGDFKAINEELRLFNPVLAEKQQV 368
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BLAST of mRNA_E-fasciculatus_F_contig15407.3790.1 vs. uniprot
Match: A0A3M1FP24_9CHLR (GTPase Obg n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A3M1FP24_9CHLR)

HSP 1 Score: 231 bits (590), Expect = 1.670e-71
Identity = 118/194 (60.82%), Postives = 152/194 (78.35%), Query Frame = 1 
Query:    7 IPVPPGTVVKDRDNGGVVLGELREGGERLVVAKGGYGGRGNAATKITRGQAPKASPPGA-GERRWLSLELRLVADVGLVGVPSAGKSTLLAASTNAKPKIADYPFTTLVPNLGVCDPEALGFKGKGMVLADIPGLLEGAHKGVGLGRAFLRHVERCRAIIHIVSGASPDPVGDFRAINQELALFSEALAVKPQV 585
            IPVPPGT+V+D + G  +LG+L   G++L+VA+GG GGRGNAA K  R +AP+ +  G  GE RW+ LEL+L+ADVGL+G P+AGKSTLL+  + AKPKIADYPFTT+ PNLGV + +      + MVLADIPGLLEGAH+GVGLG  FLRH+ER R +IH+++GASPDP+GD+ AINQEL LF+  LA +PQ+
Sbjct:   87 IPVPPGTLVRDAETG-ELLGDLTRPGQKLLVARGGRGGRGNAAFKSGRNRAPRLAEKGEPGEERWIELELKLIADVGLIGAPNAGKSTLLSVVSAAKPKIADYPFTTVTPNLGVAEADH-----RTMVLADIPGLLEGAHEGVGLGLDFLRHIERTRLLIHVLNGASPDPLGDYEAINQELLLFNPTLAERPQI 274
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BLAST of mRNA_E-fasciculatus_F_contig15407.3790.1 vs. uniprot
Match: A0A7R9YKB6_DIALT (Hypothetical protein (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YKB6_DIALT)

HSP 1 Score: 227 bits (579), Expect = 2.210e-71
Identity = 124/192 (64.58%), Postives = 145/192 (75.52%), Query Frame = 1 
Query:    7 IPVPPGTVVKDRDNGGVVLGELREGGERLVVAKGGYGGRGNAATKITRGQAPKASPPG-AGERRWLSLELRLVADVGLVGVPSAGKSTLLAASTNAKPKIADYPFTTLVPNLGVCDPEALGFKG-KGMVLADIPGLLEGAHKGVGLGRAFLRHVERCRAIIHIVSGASPDPVGDFRAINQELALFSEALAVK 576
            + VP GTVV   D+  +V GEL   G+ L VA+GG GGRGNA  K  +   P+ S  G  G  RWL LEL+L+AD GL+G P+AGKSTLLA++TNAKPKIADYPFTT+VPNLGV   + +   G +GMVLADIPGLLEGAH GVGLGRAFLRH+ERCR +IH+VSG SPDPVGD  A+N ELALFS ALA K
Sbjct:  112 VDVPVGTVVTVEDDQSLV-GELLNDGDVLRVARGGRGGRGNAFFKTDQNHTPRLSEKGDLGAERWLVLELKLLADAGLIGCPNAGKSTLLASATNAKPKIADYPFTTVVPNLGVWPRDQVQLNGGQGMVLADIPGLLEGAHDGVGLGRAFLRHIERCRLLIHVVSGDSPDPVGDLLAVNAELALFSPALAAK 302
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BLAST of mRNA_E-fasciculatus_F_contig15407.3790.1 vs. uniprot
Match: A0A7C7DX07_9CHLR (GTPase ObgE (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C7DX07_9CHLR)

HSP 1 Score: 230 bits (586), Expect = 2.240e-71
Identity = 117/196 (59.69%), Postives = 149/196 (76.02%), Query Frame = 1 
Query:    1 FQIPVPPGTVVKDRDNGGVVLGELREGGERLVVAKGGYGGRGNAATKITRGQAPKASPPGA-GERRWLSLELRLVADVGLVGVPSAGKSTLLAASTNAKPKIADYPFTTLVPNLGVCDPEALGFKGKGMVLADIPGLLEGAHKGVGLGRAFLRHVERCRAIIHIVSGASPDPVGDFRAINQELALFSEALAVKPQV 585
             +IPVPPGT+ ++ D G V++ +L + G+  VVA+GG GGRGNAA K  R  AP+ +  G  GE  WL LEL+LVADVG++GVP+AGKSTLL+  + A+PKIADYPFTT+ P LGV + +      + +VL DIPGLLEGAH+GVGLG  FLRH+ERCR +IH+++GASPDP+GDF AINQEL LF  ALA KPQ+
Sbjct:   46 LRIPVPPGTIARNADTG-VIVADLTQPGQEAVVARGGRGGRGNAAFKTARNPAPRLAEKGEPGEEAWLELELKLVADVGIIGVPNAGKSTLLSRVSAARPKIADYPFTTVEPTLGVAEVDH-----RQIVLVDIPGLLEGAHEGVGLGLEFLRHIERCRVLIHLLNGASPDPIGDFEAINQELTLFKPALADKPQL 235
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15407.3790.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRG3_ECTSI1.970e-12497.91PObg2, plastid Obg/CgtA-like GTPase 2 n=2 Tax=Ecto... [more]
A0A836CHG5_9STRA1.050e-9277.72Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YRC8_9STRA3.010e-7767.18GTP1/OBG-domain-containing protein n=1 Tax=Tribone... [more]
A0A0G4ENM0_VITBC1.720e-7568.04Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A7S2CMR3_9STRA4.140e-7563.27Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A540VF84_9CHLR1.280e-7362.76GTPase Obg n=1 Tax=Litorilinea aerophila TaxID=120... [more]
A0A7S2RXC1_9STRA1.970e-7266.49Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A3M1FP24_9CHLR1.670e-7160.82GTPase Obg n=1 Tax=Caldilineae bacterium TaxID=242... [more]
A0A7R9YKB6_DIALT2.210e-7164.58Hypothetical protein (Fragment) n=1 Tax=Diacronema... [more]
A0A7C7DX07_9CHLR2.240e-7159.69GTPase ObgE (Fragment) n=1 Tax=Chloroflexi bacteri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15407contigE-fasciculatus_F_contig15407:17..2434 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score374.4
Seed ortholog evalue3.2e-101
Seed eggNOG ortholog2880.D7FRG3
KEGG koko:K03979
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0003924,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0007275,GO:0008150,GO:0008152,GO:0009314,GO:0009416,GO:0009507,GO:0009526,GO:0009528,GO:0009532,GO:0009536,GO:0009570,GO:0009628,GO:0009657,GO:0009658,GO:0009668,GO:0009706,GO:0009790,GO:0009791,GO:0009793,GO:0009941,GO:0009987,GO:0010027,GO:0010154,GO:0010467,GO:0016020,GO:0016043,GO:0016070,GO:0016072,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019866,GO:0022414,GO:0022613,GO:0031090,GO:0031967,GO:0031969,GO:0031975,GO:0032501,GO:0032502,GO:0034470,GO:0034641,GO:0034660,GO:0042170,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0050896,GO:0061024,GO:0061458,GO:0071704,GO:0071840,GO:0090304,GO:1901360
EggNOG free text desc.GTP-binding protein
EggNOG OGsCOG0536@1,KOG1489@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009
Hectar predicted targeting categoryother localisation
Exons4
Model size585
Cds size585
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15407.3790.1prot_E-fasciculatus_F_contig15407.3790.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig15407 17..2434 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928019.2747786-CDS-E-fasciculatus_F_contig15407:16..1571622928019.2747786-CDS-E-fasciculatus_F_contig15407:16..157Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15407 17..157 +
1695995790.8566663-CDS-E-fasciculatus_F_contig15407:16..1571695995790.8566663-CDS-E-fasciculatus_F_contig15407:16..157Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15407 17..157 +
1622928019.2891655-CDS-E-fasciculatus_F_contig15407:515..7141622928019.2891655-CDS-E-fasciculatus_F_contig15407:515..714Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15407 516..714 +
1695995790.8676324-CDS-E-fasciculatus_F_contig15407:515..7141695995790.8676324-CDS-E-fasciculatus_F_contig15407:515..714Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15407 516..714 +
1622928019.3029947-CDS-E-fasciculatus_F_contig15407:1530..16571622928019.3029947-CDS-E-fasciculatus_F_contig15407:1530..1657Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15407 1531..1657 +
1695995790.8767648-CDS-E-fasciculatus_F_contig15407:1530..16571695995790.8767648-CDS-E-fasciculatus_F_contig15407:1530..1657Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15407 1531..1657 +
1622928019.3170807-CDS-E-fasciculatus_F_contig15407:2316..24341622928019.3170807-CDS-E-fasciculatus_F_contig15407:2316..2434Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15407 2317..2434 +
1695995790.8851435-CDS-E-fasciculatus_F_contig15407:2316..24341695995790.8851435-CDS-E-fasciculatus_F_contig15407:2316..2434Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15407 2317..2434 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig15407.3790.1

>prot_E-fasciculatus_F_contig15407.3790.1 ID=prot_E-fasciculatus_F_contig15407.3790.1|Name=mRNA_E-fasciculatus_F_contig15407.3790.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=195bp
FQIPVPPGTVVKDRDNGGVVLGELREGGERLVVAKGGYGGRGNAATKITR
GQAPKASPPGAGERRWLSLELRLVADVGLVGVPSAGKSTLLAASTNAKPK
IADYPFTTLVPNLGVCDPEALGFKGKGMVLADIPGLLEGAHKGVGLGRAF
LRHVERCRAIIHIVSGASPDPVGDFRAINQELALFSEALAVKPQV
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mRNA from alignment at E-fasciculatus_F_contig15407:17..2434+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig15407.3790.1 ID=mRNA_E-fasciculatus_F_contig15407.3790.1|Name=mRNA_E-fasciculatus_F_contig15407.3790.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2418bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15407:17..2434+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TTTCAGATCCCGGTTCCTCCGGGTACCGTGGTGAAGGACAGAGATAACGG
AGGCGTCGTCCTGGGCGAGCTGAGGGAGGGGGGCGAGCGGCTCGTGGTCG
CGAAGGGGGGCTACGGGGGGAGGGGCAACGCCGCAACAAAGGTACAATGT
GGATACATACATACTACGTACATTACCACCAGTTGATGTAGCTGGACACC
ACCAGCTGATAAAGGAGGATACACGCGAGGTCTGTGGTGTGTCCACTACG
ACGTACGTTTACATGAGTACACCTCCCCCACGTCCTTTCGGCGGTGTGAA
CATCTACGCCATGCGCCAAACATCGCACACCTCAAACACCCGTTGCCGTT
ATTTTTTTTTAGCATGCAAGTCCCCCCCCCCCCCTTTGTCTTTTTTCGGC
GGTGTGAATATCTACATCGTCGCACACCACGAACACCCATCGCCCGGTCC
TTCTTGTTCATGTCTTTCCTCGTTCCGTTTCGGTCCCCGAAAAACGTAGA
TCACGCGCGGCCAGGCGCCGAAGGCTTCGCCGCCGGGTGCCGGCGAGCGT
CGGTGGCTCTCCCTCGAGCTTCGCCTGGTGGCGGATGTTGGCCTGGTGGG
CGTGCCTAGCGCGGGGAAGAGCACCCTGCTTGCGGCCTCCACCAACGCCA
AGCCCAAGATCGCCGACTATCCGTTTACTACTCTCGTGCCCAACCTCGGT
AAGTCTAACCCTAACCCTCACTCTAAGTCCAAGTCAGTGTATGTACGGTG
CGACGGAAGAGCCGGGTCAAGTTTTGGACTAACGTAGACGTCACATTTTG
GGCTTTAACAATATTATCACCGGGTGTGGTATCCTGCCGGGTGATAAATT
GTAGCTCGCAGGGGCCGCTAAGGGGGCGTGATAAACCAGGGGGGGTGATA
GCACGTCTGAACACCCAAACGGTGTGGTTGTGGATGCGTACGGTGCGACG
GAAGATGGCCCTGTTCAGTTGCGGCTGACTGGCATGTAATTATCCTGAGT
TCGAATTCCTCACTCGCCAAACGTACTCAAATGTCAATGTTGGTGAAGAT
ATACATTTGTTTAAAAACAATTGGTACAACTGTTACAGAATGTTTTCTTG
TTGAGGCGGCCAAGCCTCTGGGGAAAACATGCAGGCAACGGTCGGTCAAC
TGCCTATGTGAGACTTGCTCAAACCAAAGAGCCACTGCACACAAACGAAT
CGTTTGTTTTTTTTCGCATTTTTTTCTATTGATTTTTGGTCACGAAAAGC
ACAGGAGTCTTGCTTGTTGGCATGTGCAAGATGATACGCATCACATGCGT
GCTGCATATAGTCAGCCGCCCTTTTTTTTTGTATACCTTTTTCGGGTAAG
TTAGCCTGTGACCACGGGAATCGACCGCGTCAAGTGTTACACTAGTACGA
CAGATGGAGGTACTGGATATATAGAGAGATCGAAACTATATTTAATGTGA
AGACAACAACAACAGCAACAACAACAACAACAACAACAACAACAACAACA
ACCCTTCTCTGCAGGCGTGTGCGATCCGGAGGCGTTAGGGTTCAAAGGCA
AGGGGATGGTTCTCGCGGACATCCCCGGGTTGCTGGAGGGCGCCCACAAG
GGCGTAGGCTTAGGGCGTGCGTTCTTGCGGCACGTTGAGAGGTGAACAAG
TGGATGAGCTTTTAGCTTGCATCAACACACACGTTGGGGGATGCTGCGAG
TGTGAGAGTCGGTGGGAAAGAATGGCTGAATGGGAACAACTGAATGAACT
TTGGGTTGTATCAACACCTTTGCCCATGTGAAGAGGTGAAGAACTTGATG
GACGTTTGGCTTGCATCAACACATGCACTGGAGGATGGTGTTAGTGTGAG
ATTCAGCGTGGACGAATGGTTGCGTGTGTTGCTGGCGTTGTAAATAGTAT
GCACCGCGCTCGCCATGATCCTTTGCCCACCTATCGTGAAAACACATGCC
ACCACCCACGGCGCGCGCTTTACGTCTTTTTATACCTCCATGGGACCAGC
GGAGATCGCACGGAAAATACTGCAGATGGGGTAACGTGTTTGCCGTTTCT
CAACCCCTACGACTTCCTGTTCGCGAAGCACCACGTAAAGCCGTTGAGTG
TAGGTTTCAAGCACCAATCTTTCCGTTTTCGCCACTCCTCCGACTTCCTC
TGATGTAAATCACCACGTAAAGGCGTTCGTTGAGAGAGTTTTCGGCCACC
ATGCTCTCCGTTTTCTCAACCCCGCCGATTTCCTCCTTATGAATCACCGC
GTAAATGCGTTGGGTGGGGCTTCAACAATTCCAATGGCGTTACGCAACAG
GTGTCGCGCCATCATCCACATCGTCAGCGGAGCTTCGCCGGACCCCGTGG
GAGACTTCCGGGCGATCAACCAGGAGCTTGCGCTATTCTCCGAGGCATTA
GCCGTGAAACCGCAAGTA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15407:17..2434+

>mRNA_E-fasciculatus_F_contig15407.3790.1 ID=mRNA_E-fasciculatus_F_contig15407.3790.1|Name=mRNA_E-fasciculatus_F_contig15407.3790.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1170bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15407:17..2434+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TTTCAGATCCCGGTTCCTCCGGGTACCGTGGTGAAGGACAGAGATAACGG
AGGCGTCGTCCTGGGCGAGCTGAGGGAGGGGGGCGAGCGGCTCGTGGTCG
CGAAGGGGGGCTACGGGGGGAGGGGCAACGCCGCAACAAAGTTTCAGATC
CCGGTTCCTCCGGGTACCGTGGTGAAGGACAGAGATAACGGAGGCGTCGT
CCTGGGCGAGCTGAGGGAGGGGGGCGAGCGGCTCGTGGTCGCGAAGGGGG
GCTACGGGGGGAGGGGCAACGCCGCAACAAAGATCACGCGCGGCCAGGCG
CCGAAGGCTTCGCCGCCGGGTGCCGGCGAGCGTCGGTGGCTCTCCCTCGA
GCTTCGCCTGGTGGCGGATGTTGGCCTGGTGGGCGTGCCTAGCGCGGGGA
AGAGCACCCTGCTTGCGGCCTCCACCAACGCCAAGCCCAAGATCGCCGAC
TATCCGTTTACTACTCTCGTGCCCAACCTCGATCACGCGCGGCCAGGCGC
CGAAGGCTTCGCCGCCGGGTGCCGGCGAGCGTCGGTGGCTCTCCCTCGAG
CTTCGCCTGGTGGCGGATGTTGGCCTGGTGGGCGTGCCTAGCGCGGGGAA
GAGCACCCTGCTTGCGGCCTCCACCAACGCCAAGCCCAAGATCGCCGACT
ATCCGTTTACTACTCTCGTGCCCAACCTCGGCGTGTGCGATCCGGAGGCG
TTAGGGTTCAAAGGCAAGGGGATGGTTCTCGCGGACATCCCCGGGTTGCT
GGAGGGCGCCCACAAGGGCGTAGGCTTAGGGCGTGCGTTCTTGCGGCACG
TTGAGAGGCGTGTGCGATCCGGAGGCGTTAGGGTTCAAAGGCAAGGGGAT
GGTTCTCGCGGACATCCCCGGGTTGCTGGAGGGCGCCCACAAGGGCGTAG
GCTTAGGGCGTGCGTTCTTGCGGCACGTTGAGAGGTGTCGCGCCATCATC
CACATCGTCAGCGGAGCTTCGCCGGACCCCGTGGGAGACTTCCGGGCGAT
CAACCAGGAGCTTGCGCTATTCTCCGAGGCATTAGCCGTGAAACCGCAAG
TAGTGTCGCGCCATCATCCACATCGTCAGCGGAGCTTCGCCGGACCCCGT
GGGAGACTTCCGGGCGATCAACCAGGAGCTTGCGCTATTCTCCGAGGCAT
TAGCCGTGAAACCGCAAGTA
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