mRNA_E-fasciculatus_F_contig15363.3766.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15363.3766.1 vs. uniprot
Match: A0A6H5KV29_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KV29_9PHAE) HSP 1 Score: 526 bits (1356), Expect = 1.020e-178 Identity = 311/367 (84.74%), Postives = 316/367 (86.10%), Query Frame = 1
Query: 1 GHAVLVDFSLARTGLDVAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVIFEALVGEHPFRRPRGEKADHRHQATQTLFDRIQRGRLEYPKSLSAPALSLLRGLLSLNPDDRPGFSPFPPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLTLAPATTTAPPTDSEHPVSD-AGERSYSGDPHDEVMGTAPSGARAGAPLPCLNNEAGVRGAAXXXXXXXXXXXXXXXXXXXTALNGGAEAR-----ERPPVLLLEHVFFRGLPGWGGPGTGGAWEDGKLEGSVVAVPDLCDALDVRHFDSRFTSQAVELSLQGHPHKGGPTPAFEDFEWREDSCIEYAQVAERSTPGLFESLASALWC 1083
GHAVLVDFSLARTGLD APDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCV+FEALVGEHPFRRPRGEKADHRHQ TQ LFDRIQRGRLEYPKSLSAP+LSLLRGLLSLNPDDRPGFS FPPTPXXXXXXXXXXXXXXXXXXXX T TLAPATTTAPPTDSE PV+D G+ SGD H EV GTAPSGA GAP CL NEAGVRG AXXXXXXXXXXX TA GGA AR ERPPVLLLEHVFF+GLPGWGGPGTGGAWED KLEGS VAVP LCD LDVRHFDSRFTSQAVELSLQGHPHKGGPTPAFEDFEWREDSCIEYAQ AERSTPGL ESLASALWC
Sbjct: 414 GHAVLVDFSLARTGLDAAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVVFEALVGEHPFRRPRGEKADHRHQ-TQALFDRIQRGRLEYPKSLSAPSLSLLRGLLSLNPDDRPGFSSFPPTPXXXXXXXXXXXXXXXXXXXXV--------TTTLAPATTTAPPTDSEQPVADDVGKGRCSGDTHGEVAGTAPSGA-GGAPPLCLMNEAGVRGGAXXXXXXXXXXXSPSSAR--TASPGGARARRASCGERPPVLLLEHVFFKGLPGWGGPGTGGAWEDAKLEGSAVAVPALCDVLDVRHFDSRFTSQAVELSLQGHPHKGGPTPAFEDFEWREDSCIEYAQAAERSTPGLLESLASALWC 768
BLAST of mRNA_E-fasciculatus_F_contig15363.3766.1 vs. uniprot
Match: A0A7S2I6J4_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I6J4_9STRA) HSP 1 Score: 100 bits (249), Expect = 8.780e-21 Identity = 54/123 (43.90%), Postives = 74/123 (60.16%), Query Frame = 1
Query: 1 GHAVLVDFSLARTGLDVAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVIFEALVGEHPFRRPRGEKADHRHQATQTLFDRIQRGRLEYPKSLSAPALSLLRGLLSLNPDDRPGFSP 369
GH L DF L++ G+ + G +FCG+ Y APEI+ ++GH VD WSLG +++E L G PF EK LF++I+RG LEYP+ LSA A +LLRGLL+ +P+ R G P
Sbjct: 29 GHVRLTDFGLSKEGISSSSSGAN-SFCGTPEYLAPEILNRQGHGRAVDWWSLGALLYEMLTGLPPFYCRDREK----------LFEKIRRGNLEYPRYLSARAQTLLRGLLTKDPNRRLGSGP 140
BLAST of mRNA_E-fasciculatus_F_contig15363.3766.1 vs. uniprot
Match: A0A7S1ZV30_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZV30_TRICV) HSP 1 Score: 101 bits (251), Expect = 6.050e-20 Identity = 54/120 (45.00%), Postives = 74/120 (61.67%), Query Frame = 1
Query: 1 GHAVLVDFSLARTGLDVAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVIFEALVGEHPFRRPRGEKADHRHQATQTLFDRIQRGRLEYPKSLSAPALSLLRGLLSLNPDDRPG 360
GH L DF L++ G+ + G T +FCG+ Y APEI+ ++GH VD WSLG +++E L G PF EK LF++I+RG L+YP+SLS+ A SLLRGLL+ +P R G
Sbjct: 182 GHVRLTDFGLSKEGISSSSSGAT-SFCGTPEYLAPEILNRQGHGRAVDWWSLGALLYEMLTGLPPFYCRDREK----------LFEKIRRGHLDYPRSLSSRAQSLLRGLLTKDPKRRLG 290
BLAST of mRNA_E-fasciculatus_F_contig15363.3766.1 vs. uniprot
Match: A0A7S0FKL0_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FKL0_9STRA) HSP 1 Score: 100 bits (249), Expect = 2.980e-19 Identity = 53/123 (43.09%), Postives = 75/123 (60.98%), Query Frame = 1
Query: 1 GHAVLVDFSLARTGLDVAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVIFEALVGEHPFRRPRGEKADHRHQATQTLFDRIQRGRLEYPKSLSAPALSLLRGLLSLNPDDRPGFSP 369
GH L DF L++ G+ + G T +FCG+ Y APEI+ ++GH VD WSLG +++E L G PF EK LF++I++G LEYP+SLS +++LLRGLL+ +P R G P
Sbjct: 313 GHVRLTDFGLSKEGISSSSSGAT-SFCGTPEYLAPEILNRQGHGRAVDWWSLGALLYEMLTGLPPFYCRDREK----------LFEKIRKGHLEYPRSLSPRSVNLLRGLLTKDPRRRLGSGP 424
BLAST of mRNA_E-fasciculatus_F_contig15363.3766.1 vs. uniprot
Match: A0A1S8X7H0_9TREM (Protein kinase domain protein (Fragment) n=2 Tax=Opisthorchis viverrini TaxID=6198 RepID=A0A1S8X7H0_9TREM) HSP 1 Score: 95.1 bits (235), Expect = 4.830e-18 Identity = 48/123 (39.02%), Postives = 69/123 (56.10%), Query Frame = 1
Query: 1 GHAVLVDFSLARTGLDVAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVIFEALVGEHPFRRPRGEKADHRHQATQTLFDRIQRGRLEYPKSLSAPALSLLRGLLSLNPDDRPGFSP 369
GH L DF L++ + A DG+T++FCG+ Y APE++ + GH T D WS G +++E L G PF+ ADHR + + I + +L P+ LS A SLLR L P +R G+ P
Sbjct: 7 GHIRLTDFGLSKEAISEASDGRTYSFCGTVEYMAPEVVNRHGHGTAADWWSFGVLMYELLTGTLPFQ------ADHR----KDTMELILKAKLAMPQFLSPDAQSLLRALFKRTPSNRLGYGP 119
BLAST of mRNA_E-fasciculatus_F_contig15363.3766.1 vs. uniprot
Match: A0A5D6YCP2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCP2_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 1.080e-17 Identity = 44/103 (42.72%), Postives = 63/103 (61.17%), Query Frame = 1
Query: 46 DVAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVIFEALVGEHPFRRPRGEKADHRHQATQTLFDRIQRGRLEYPKSLSAPALSLLRGLLSLNPDDR 354
D+AP +T++FCGS Y +PE++ K+GH D+WS GC +E L G PF++ + LF++I+RG + YP LS PALSLL GLL ++P R
Sbjct: 159 DMAPGARTYSFCGSPEYLSPEMVAKDGHGFETDMWSFGCFCYELLTGAPPFQQGS---------SLARLFEQIRRGAVWYPSDLSGPALSLLEGLLCVDPSRR 252
BLAST of mRNA_E-fasciculatus_F_contig15363.3766.1 vs. uniprot
Match: A0A4S2KRI9_OPIFE (Ribosomal protein S6 kinase n=4 Tax=Opisthorchiidae TaxID=6196 RepID=A0A4S2KRI9_OPIFE) HSP 1 Score: 95.1 bits (235), Expect = 3.050e-17 Identity = 48/123 (39.02%), Postives = 69/123 (56.10%), Query Frame = 1
Query: 1 GHAVLVDFSLARTGLDVAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVIFEALVGEHPFRRPRGEKADHRHQATQTLFDRIQRGRLEYPKSLSAPALSLLRGLLSLNPDDRPGFSP 369
GH L DF L++ + A DG+T++FCG+ Y APE++ + GH T D WS G +++E L G PF+ ADHR + + I + +L P+ LS A SLLR L P +R G+ P
Sbjct: 196 GHIRLTDFGLSKEAISEASDGRTYSFCGTVEYMAPEVVNRHGHGTAADWWSFGVLMYELLTGTLPFQ------ADHR----KDTMELILKAKLAMPQFLSPDAQSLLRALFKRTPSNRLGYGP 308
BLAST of mRNA_E-fasciculatus_F_contig15363.3766.1 vs. uniprot
Match: A0A8J4SZS3_9TREM (Non-specific serine/threonine protein kinase n=1 Tax=Paragonimus heterotremus TaxID=100268 RepID=A0A8J4SZS3_9TREM) HSP 1 Score: 94.0 bits (232), Expect = 4.410e-17 Identity = 51/121 (42.15%), Postives = 66/121 (54.55%), Query Frame = 1
Query: 1 GHAVLVDFSLARTGLDVAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVIFEALVGEHPFRRPRGEKADHRHQATQTLFDRIQRGRLEYPKSLSAPALSLLRGLLSLNPDDRPGF 363
GH L DF L++ +D G+TF+FCG+ Y APE+IT+ GHD D WSLG V+FE L G PF+ + H+ I R +L P+ LS A SLLR L NP R G+
Sbjct: 165 GHIKLTDFGLSKEAVD---KGRTFSFCGTVEYMAPEVITRRGHDASADWWSLGVVMFEMLCGVLPFQGESRRETMHQ----------ILRAKLRMPQFLSLEAQSLLRALFKRNPSSRLGY 272
BLAST of mRNA_E-fasciculatus_F_contig15363.3766.1 vs. uniprot
Match: A0A4E0RLR4_FASHE (Non-specific serine/threonine protein kinase n=1 Tax=Fasciola hepatica TaxID=6192 RepID=A0A4E0RLR4_FASHE) HSP 1 Score: 94.0 bits (232), Expect = 7.850e-17 Identity = 50/123 (40.65%), Postives = 68/123 (55.28%), Query Frame = 1
Query: 1 GHAVLVDFSLARTGLDVAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVIFEALVGEHPFRRPRGEKADHRHQATQTLFDRIQRGRLEYPKSLSAPALSLLRGLLSLNPDDRPGFSP 369
GH L DF L++ + G+ F+FCG+ Y APE+IT+ GHD+ D WSLG ++FE L G PF+ GE + +I R +L P+ LS A SLLR L NP +R G+ P
Sbjct: 166 GHIKLTDFGLSKEAIHHGSGGQAFSFCGTIEYMAPEVITRRGHDSAADWWSLGVLMFEMLCGVLPFQ---GENK-------RDTMGQILRAKLRMPQFLSPDAQSLLRALFKRNPSNRLGYGP 278
BLAST of mRNA_E-fasciculatus_F_contig15363.3766.1 vs. uniprot
Match: A0A5J4NXL0_9TREM (Ribosomal protein S6 kinase alpha-1/2/3/6 n=1 Tax=Paragonimus westermani TaxID=34504 RepID=A0A5J4NXL0_9TREM) HSP 1 Score: 93.2 bits (230), Expect = 1.350e-16 Identity = 52/121 (42.98%), Postives = 68/121 (56.20%), Query Frame = 1
Query: 1 GHAVLVDFSLARTGLDVAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVIFEALVGEHPFRRPRGEKADHRHQATQTLFDRIQRGRLEYPKSLSAPALSLLRGLLSLNPDDRPGF 363
GH L DF L++ +D G+TF+FCG+ Y APE+IT+ GHD D WSLG V+FE L G PF+ GE + + +I R +L P+ LS A SLLR L NP R G+
Sbjct: 178 GHIKLTDFGLSKEAVD---KGRTFSFCGTVEYMAPEVITRRGHDASADWWSLGVVMFEMLCGVLPFQ---GE-------SRRETMQQILRAKLRMPQFLSLEAQSLLRALFKRNPCSRLGY 285 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15363.3766.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15363.3766.1 >prot_E-fasciculatus_F_contig15363.3766.1 ID=prot_E-fasciculatus_F_contig15363.3766.1|Name=mRNA_E-fasciculatus_F_contig15363.3766.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=169bp MGTAPSGARAGAPLPCLNNEAGVRGAAAAAAAAAARRPQQSASSARTALNback to top mRNA from alignment at E-fasciculatus_F_contig15363:130..3018+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15363.3766.1 ID=mRNA_E-fasciculatus_F_contig15363.3766.1|Name=mRNA_E-fasciculatus_F_contig15363.3766.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2889bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15363:130..3018+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15363:130..3018+ >mRNA_E-fasciculatus_F_contig15363.3766.1 ID=mRNA_E-fasciculatus_F_contig15363.3766.1|Name=mRNA_E-fasciculatus_F_contig15363.3766.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1014bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15363:130..3018+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |