mRNA_E-fasciculatus_F_contig1535.3760.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1535.3760.1 vs. uniprot
Match: A0A6H5L4D4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4D4_9PHAE) HSP 1 Score: 310 bits (794), Expect = 1.820e-97 Identity = 208/267 (77.90%), Postives = 220/267 (82.40%), Query Frame = 1
Query: 10 NSWTGSKKKTRDQQQQRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------SGRSSYTPPDL----QFHPDFTLKVGQVLLGKLLNPARTAMAYASPTDGSVILATAIGKAPRDADGNTTGQVPQKNRTLLKADERKMSKVRGLRSEIIGARLEKKRAALEGRTLRKGKVATFMGFMPFGKHGFLRRRAREHAEAHMGEATLSITKKGDLEVSVDGTVVLRKSGPSWFGFRRTDRSYELRVTEEGVVISRRGMYNWGIKAQDP 777
N+WTGSK KTR+QQQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S RSSYT P + HP+ GQVLL +LLNPART+MAYASPTDGSVILATAIG APRDADGNTTG V Q NRTLL A+ RKMSKVR LRSE I A LEKKR A EGRTLR+GK+AT MGFMPFGKHGFLRRRAREH EA+MGEATLSIT KG L VSVDG VVLRKSGP FGFRRTDRSYELRVTE GVVISRRGMY+WG+KAQDP
Sbjct: 159 NTWTGSKNKTRNQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDRSSYTHPGPTVPPRLHPE-----GQVLLARLLNPARTSMAYASPTDGSVILATAIGNAPRDADGNTTGPVTQNNRTLLTANPRKMSKVRALRSENIVAGLEKKRVAREGRTLREGKLATLMGFMPFGKHGFLRRRAREHVEAYMGEATLSITNKGGLGVSVDGIVVLRKSGPYCFGFRRTDRSYELRVTEAGVVISRRGMYDWGLKAQDP 420
BLAST of mRNA_E-fasciculatus_F_contig1535.3760.1 vs. uniprot
Match: A0A6H5K3Q0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q0_9PHAE) HSP 1 Score: 287 bits (735), Expect = 6.500e-89 Identity = 160/211 (75.83%), Postives = 167/211 (79.15%), Query Frame = 1
Query: 157 GRSSYTPPD----LQFHPDFTLKVGQVLLGKLLNPARTAMAYASPTDGSVILATAIGKAPRDADGNTTGQVPQKNRTLLKADERKMSKVRGLRSEIIGARLEKKRAALEGRTLRKGKVATFMGFMPFGKHGFLRRRAREHAEAHMGEATLSITKKGDLEVSVDGTVVLRKSGPSWFGFRRTDRSYELRVTEEGVVISRRGMYNWGIKAQDP 777
GR T P L+FHPDF LKVGQVLLG+L NPART++AYASPTDGSVILATAIGKAPRDADGNTTG VPQKNRTLL A+ RKMSKVR +SE I ARLEKKRAALEGRTLRK HGFLRRRARE AEAHMGEATL ITKKG LEVSVDG VVLR SG SWF FRRTD SYELRV EEGVVI RRGMY+WGIKA P
Sbjct: 204 GRGPSTVPQQIRGLEFHPDFALKVGQVLLGRLPNPARTSIAYASPTDGSVILATAIGKAPRDADGNTTGPVPQKNRTLLTANPRKMSKVRARQSENIVARLEKKRAALEGRTLRK--------------HGFLRRRAREQAEAHMGEATLFITKKGGLEVSVDGIVVLRMSGLSWFVFRRTDLSYELRVAEEGVVIFRRGMYDWGIKAWGP 400
BLAST of mRNA_E-fasciculatus_F_contig1535.3760.1 vs. uniprot
Match: D7G9B0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9B0_ECTSI) HSP 1 Score: 277 bits (709), Expect = 6.520e-84 Identity = 140/153 (91.50%), Postives = 144/153 (94.12%), Query Frame = 1
Query: 319 APRDADGNTTGQVPQKNRTLLKADERKMSKVRGLRSEIIGARLEKKRAALEGRTLRKGKVATFMGFMPFGKHGFLRRRAREHAEAHMGEATLSITKKGDLEVSVDGTVVLRKSGPSWFGFRRTDRSYELRVTEEGVVISRRGMYNWGIKAQDP 777
APRDADGNTTG VPQKNRTLL A+ RKMSKVR LRSE I ARLEKKRAALEGRTLR+GKVAT MGF+PFGKHGFLRRRAREHAEAHMGEATLSITKKG LEVSVDG VVLRKSGPSWFGFRRTDRSYELRVTEEGVVISRRGMY+WGIKAQDP
Sbjct: 338 APRDADGNTTGPVPQKNRTLLTANPRKMSKVRALRSENIAARLEKKRAALEGRTLRRGKVATLMGFLPFGKHGFLRRRAREHAEAHMGEATLSITKKGGLEVSVDGIVVLRKSGPSWFGFRRTDRSYELRVTEEGVVISRRGMYDWGIKAQDP 490
BLAST of mRNA_E-fasciculatus_F_contig1535.3760.1 vs. uniprot
Match: A0A6H5LDV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDV1_9PHAE) HSP 1 Score: 251 bits (641), Expect = 7.150e-78 Identity = 129/183 (70.49%), Postives = 148/183 (80.87%), Query Frame = 1
Query: 229 LGKLLNPARTAMAYASPTDGSVILATAIGKAPRDADGNTTGQVPQKNRTLLKADERKMSKVRGLRSEIIGARLEKKRAALEGRTLRK-GKVATFMGFMPFGKHGFLRRRAREHAEAHMGEATLSITKKGDLEVSVDGTVVLRKSGPSWFGFRRTDRSYELRVTEEGVVISRRGMYNWGIKAQD 774
+GKLLNPA+T+M YASP DGSVI ATA GKAP D D + TGQVP LLKA+ RKM GLRSEI A LEK++AALEGR L K GKV T MGF+PFGK+GF RRAREHAEAHMGEATLS+TKKG+LEV+VDG VLRKSGPSWFGFR++D SYELR TEEG+VISR+G ++W +KA D
Sbjct: 1 MGKLLNPAKTSMLYASPIDGSVIHATANGKAPHDKDDDMTGQVPHGKHVLLKANSRKMLNALGLRSEIFEANLEKRKAALEGRELPKEGKVDTLMGFLPFGKNGFRGRRAREHAEAHMGEATLSLTKKGNLEVAVDGMTVLRKSGPSWFGFRKSDSSYELRATEEGIVISRQGKFDWSVKAGD 183
BLAST of mRNA_E-fasciculatus_F_contig1535.3760.1 vs. uniprot
Match: D7FTM0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTM0_ECTSI) HSP 1 Score: 231 bits (589), Expect = 2.790e-70 Identity = 114/171 (66.67%), Postives = 136/171 (79.53%), Query Frame = 1
Query: 262 MAYASPTDGSVILATAIGKAPRDADGNTTGQVPQKNRTLLKADERKMSKVRGLRSEIIGARLEKKRAALEGRTLRKGKVATFMGFMPFGKHGFLRRRAREHAEAHMGEATLSITKKGDLEVSVDGTVVLRKSGPSWFGFRRTDRSYELRVTEEGVVISRRGMYNWGIKAQD 774
M YA+P DGSV+ AT+ G+ PRD +G TG +PQK TLL A+ER M+K RSEII RL KK A EGRTL+K K++TFMGF+PFGK GFL RRAR+ AEAH+GEATL +T KG LEVSVDGTVVLRK GPS+FGFRRTD SYEL+VTEEG+ +SRRG + WG+KA+D
Sbjct: 1 MVYAAPADGSVVFATSTGRVPRDEEGRATGSLPQKRLTLLAANERLMAKAEDFRSEIILRRLVKKNALREGRTLKKSKMSTFMGFLPFGKRGFLHRRARDRAEAHLGEATLKLTSKGILEVSVDGTVVLRKKGPSYFGFRRTDPSYELQVTEEGIEVSRRGDFVWGVKAED 171
BLAST of mRNA_E-fasciculatus_F_contig1535.3760.1 vs. uniprot
Match: D7G9A5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A5_ECTSI) HSP 1 Score: 229 bits (583), Expect = 4.590e-70 Identity = 114/126 (90.48%), Postives = 120/126 (95.24%), Query Frame = 1
Query: 400 MSKVRGLRSEIIGARLEKKRAALEGRTLRKGKVATFMGFMPFGKHGFLRRRAREHAEAHMGEATLSITKKGDLEVSVDGTVVLRKSGPSWFGFRRTDRSYELRVTEEGVVISRRGMYNWGIKAQDP 777
MSKVR LRSE I ARLEKK+AALEG+TLR+GKVAT MGF+PFGKHGFLRRRAREHAEAH+GEATLSITKKG LEVSVDGTVVLRKSGPSWFGFRRTDRSYELRVTEEGV ISRRGMY+WGIKAQDP
Sbjct: 1 MSKVRALRSENIAARLEKKKAALEGQTLRRGKVATLMGFLPFGKHGFLRRRAREHAEAHVGEATLSITKKGGLEVSVDGTVVLRKSGPSWFGFRRTDRSYELRVTEEGVDISRRGMYDWGIKAQDP 126
BLAST of mRNA_E-fasciculatus_F_contig1535.3760.1 vs. uniprot
Match: A0A6H5JQZ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQZ9_9PHAE) HSP 1 Score: 216 bits (551), Expect = 9.440e-63 Identity = 111/201 (55.22%), Postives = 144/201 (71.64%), Query Frame = 1
Query: 169 YTPPDLQFHPDFTLKVGQVLLGKLLNPARTAMAYASPTDGSVILATAIGKAPRDADGNTTGQVPQKNRTLLKADERKMSKVRGLRSEIIGARLEKKRAALEGRTLRKGKVATFMGFMPFGKHGFLRRRAREHAEAHMGEATLSITKKGDLEVSVDGTVVLRKSGPSWFGFRRTDRSYELRVTEEGVVISRRGMYNWGIKAQ 771
+TP QFH DF L VG L G+L N A+TAM YA+ D V+ ATA G P D + T Q RTLL+A+ ++MS V GL++EI+ E ++ +EGR L+K K+ +GF+PFGKHGF RRR REHA AH+GEATLS+T KGDLEVSVDG++VL KSGPSWFGFR+ D +YE+RVTE GVV+ +G ++WGI+A+
Sbjct: 109 HTPDAFQFHSDFVLHVGDFLHGRLPNLAKTAMVYATSIDCFVVRATATGTPPGDLEDRTVDPASQTRRTLLEANTQRMSIVEGLQAEIMAETAEAEKETVEGRGLKKSKMVAVLGFLPFGKHGFRRRRPREHAAAHLGEATLSVTNKGDLEVSVDGSIVLGKSGPSWFGFRKKDFTYEVRVTE-GVVMVSQGGHDWGIQAR 308
BLAST of mRNA_E-fasciculatus_F_contig1535.3760.1 vs. uniprot
Match: D7FXU8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXU8_ECTSI) HSP 1 Score: 209 bits (531), Expect = 2.040e-61 Identity = 106/172 (61.63%), Postives = 129/172 (75.00%), Query Frame = 1
Query: 262 MAYASPTDGSVILATAIGKAPRDADGNTTGQVPQKNRTLLKADERKMSKVRGLRSEIIGARLEKKRAALEGRTLRKGKVATFMGFMPFGKHGFLRRRAREHAEAHMGEATLSITKKGDLEVSVDGTVVLRKSGPSWFGFRRTDRSYELRVTEEGVVISRRGMYNWGIKAQDP 777
M YA+ DGSV+ ATA G P D + T V RTLL+A R MSKV GLR+EI+ R E ++ A+EGR L K K+ T +GF+PFGKHGF RRRAREHA AH+GEATLS+T GDLEVSVDG +VLRKSGPSWFGFR+ D +YE+RVTE+GV +SR G Y WGI+A++P
Sbjct: 1 MVYATSIDGSVVHATATGTPPGDLEDRTIDPVSLTRRTLLEAIPRCMSKVEGLRAEIMEEREEAEKEAVEGRGLTKSKMVTVLGFLPFGKHGFRRRRAREHAAAHLGEATLSVTNTGDLEVSVDGFLVLRKSGPSWFGFRQKDSTYEVRVTEDGVAVSRGGEYAWGIQAREP 172
BLAST of mRNA_E-fasciculatus_F_contig1535.3760.1 vs. uniprot
Match: D8LJ57_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ57_ECTSI) HSP 1 Score: 218 bits (555), Expect = 5.890e-61 Identity = 107/154 (69.48%), Postives = 128/154 (83.12%), Query Frame = 1
Query: 316 KAPRDADGNTTGQVPQKNRTLLKADERKMSKVRGLRSEIIGARLEKKRAALEGRTL-RKGKVATFMGFMPFGKHGFLRRRAREHAEAHMGEATLSITKKGDLEVSVDGTVVLRKSGPSWFGFRRTDRSYELRVTEEGVVISRRGMYNWGIKAQD 774
+APRD +GN TGQVP + LLKA+ RKM +GLRSEI A LEK++AALEGR L +KGKVA MGF+P GK+GF RRRAREHAEAH+GEATLS+T KG+LEV+VDGT VLRKSGPSWFGFRR+D SYELRV EEG+VISR+G ++W +K +D
Sbjct: 366 QAPRDKNGNMTGQVPHEKHVLLKANARKMLNAQGLRSEIFEANLEKRKAALEGRELPKKGKVAALMGFLPLGKNGFRRRRAREHAEAHLGEATLSLTTKGNLEVAVDGTTVLRKSGPSWFGFRRSDSSYELRVNEEGIVISRQGKFDWSVKVED 519
BLAST of mRNA_E-fasciculatus_F_contig1535.3760.1 vs. uniprot
Match: D7FMM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMM4_ECTSI) HSP 1 Score: 214 bits (545), Expect = 1.090e-59 Identity = 104/174 (59.77%), Postives = 136/174 (78.16%), Query Frame = 1
Query: 256 TAMAYASPTDGSVILATAIGKAPRDADGNTTGQVPQKNRTLLKADERKMSKVRGLRSEIIGARLEKKRAALEGRTLRKGKVATFMGFMPFGKHGFLRRRAREHAEAHMGEATLSITKKGDLEVSVDGTVVLRKSGPSWFGFRRTDRSYELRVTEEGVVISRRGMYNWGIKAQDP 777
TAM YA+ DGSV+ ATA G P D + + V Q RTLL+A+ ++MS V GLR+EI+ E ++AA+EG+ L++ K+ T +GF+PFGKHGF RRRARE A AH+GEA LS+T KGDLEVSVDG++VLRKSGPSWFGFR+ D +YE+RVTE+GVV+SR G Y+WGI+A++P
Sbjct: 311 TAMVYATSIDGSVVHATATGTPPGDLEDRSIDPVSQTRRTLLEANPQRMSIVEGLRAEIVAETEEAEKAAVEGQGLKRSKMVTVLGFLPFGKHGFRRRRARERAAAHLGEAALSVTNKGDLEVSVDGSIVLRKSGPSWFGFRKKDSTYEVRVTEDGVVVSRGGKYDWGIQAREP 484 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1535.3760.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1535.3760.1 >prot_E-fasciculatus_F_contig1535.3760.1 ID=prot_E-fasciculatus_F_contig1535.3760.1|Name=mRNA_E-fasciculatus_F_contig1535.3760.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=173bp MAYASPTDGSVILATAIGKAPRDADGNTTGQVPQKNRTLLKADERKMSKVback to top mRNA from alignment at E-fasciculatus_F_contig1535:4322..6205+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1535.3760.1 ID=mRNA_E-fasciculatus_F_contig1535.3760.1|Name=mRNA_E-fasciculatus_F_contig1535.3760.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1884bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1535:4322..6205+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1535:4322..6205+ >mRNA_E-fasciculatus_F_contig1535.3760.1 ID=mRNA_E-fasciculatus_F_contig1535.3760.1|Name=mRNA_E-fasciculatus_F_contig1535.3760.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1038bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1535:4322..6205+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |