mRNA_E-fasciculatus_F_contig15239.3700.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15239.3700.1 vs. uniprot
Match: D7G542_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G542_ECTSI) HSP 1 Score: 196 bits (498), Expect = 3.260e-56 Identity = 92/96 (95.83%), Postives = 95/96 (98.96%), Query Frame = 1
Query: 1 VRASRLPDDVPLLQRLVDDGLIVSTPPQDYDDSYCIKYAMAREGYVVTNDLYRDHVKGIEGRKKADAARRWIKSHSISYTFVGDEFFPNPDFSFHQ 288
V+ASRLPDDV LLQRLVDDGLIVSTPPQDYDDSYCIKYAMAR+GYVVTNDLYRDHVKGIEGRKKADAARRWIK+HSISYTFVGDEFFPNPDFSFHQ
Sbjct: 1494 VKASRLPDDVQLLQRLVDDGLIVSTPPQDYDDSYCIKYAMARDGYVVTNDLYRDHVKGIEGRKKADAARRWIKAHSISYTFVGDEFFPNPDFSFHQ 1589
BLAST of mRNA_E-fasciculatus_F_contig15239.3700.1 vs. uniprot
Match: A0A7S2CKB1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CKB1_9STRA) HSP 1 Score: 130 bits (327), Expect = 3.200e-36 Identity = 57/94 (60.64%), Postives = 72/94 (76.60%), Query Frame = 1
Query: 1 VRASRLPDDVPLLQRLVDDGLIVSTPPQDYDDSYCIKYAMAREGYVVTNDLYRDHVKGIEGRKKADAARRWIKSHSISYTFVGDEFFPNPDFSF 282
+R+S+LPDDV LL++L +DG ++ TPPQDYDDSYCI+YA G VVTND+YRDHV I ++ +W++SH ISYTFVGDEF PNPDF F
Sbjct: 106 IRSSQLPDDVLLLRKLCEDGTLIGTPPQDYDDSYCIRYAETHGGSVVTNDMYRDHVGKITNHRERKECLQWMRSHLISYTFVGDEFLPNPDFKF 199
BLAST of mRNA_E-fasciculatus_F_contig15239.3700.1 vs. uniprot
Match: A0A485LSN2_9STRA (Aste57867_25204 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LSN2_9STRA) HSP 1 Score: 134 bits (337), Expect = 1.630e-34 Identity = 58/94 (61.70%), Postives = 77/94 (81.91%), Query Frame = 1
Query: 1 VRASRLPDDVPLLQRLVDDGLIVSTPPQDYDDSYCIKYAMAREGYVVTNDLYRDHVKGIEGRKKADAARRWIKSHSISYTFVGDEFFPNPDFSF 282
V ++LPDDV LLQ +V +GL+++TPPQDYDDSYCI+YA +G +VTNDL+RDH++ I+G K+ A R W+K+H IS+T+VGDEFFPNPDF F
Sbjct: 865 VSPTKLPDDVTLLQAMVLEGLVIATPPQDYDDSYCIQYAGTHDGCLVTNDLFRDHLENIKGGKQKGAMREWLKNHRISFTWVGDEFFPNPDFRF 958
BLAST of mRNA_E-fasciculatus_F_contig15239.3700.1 vs. uniprot
Match: K3W6K7_GLOUD (RNase NYN domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6K7_GLOUD) HSP 1 Score: 125 bits (315), Expect = 1.870e-34 Identity = 58/94 (61.70%), Postives = 76/94 (80.85%), Query Frame = 1
Query: 1 VRASRLPDDVPLLQRLVDDGLIVSTPPQDYDDSYCIKYAMAREGYVVTNDLYRDHVKGIEG-RKKADAARRWIKSHSISYTFVGDEFFPNPDFS 279
V AS++PD+V LLQRLV+DGL++ TP QDYDD+YCI+YA +G VVTNDLYRDHV+ + G R++ A R W+ +H ISYT+VG+EF PNP+FS
Sbjct: 91 VPASKIPDNVALLQRLVEDGLLIPTPAQDYDDTYCIQYAGNHDGCVVTNDLYRDHVENMTGPRERKVAMRSWLTAHRISYTWVGNEFLPNPNFS 184
BLAST of mRNA_E-fasciculatus_F_contig15239.3700.1 vs. uniprot
Match: A0A7S2D3B2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D3B2_9STRA) HSP 1 Score: 123 bits (309), Expect = 2.520e-34 Identity = 53/91 (58.24%), Postives = 70/91 (76.92%), Query Frame = 1
Query: 1 VRASRLPDDVPLLQRLVDDGLIVSTPPQDYDDSYCIKYAMAREGYVVTNDLYRDHVKGIEGRKKADAARRWIKSHSISYTFVGDEFFPNPD 273
VRAS++PDDV LLQ+L +G ++ TPPQDYDDSYCI+YA + +G VVTND+YRDHVKG R+ + + W +H +SYT+V DEF PNP+
Sbjct: 39 VRASQVPDDVLLLQQLCAEGTLIGTPPQDYDDSYCIRYAQSHDGLVVTNDMYRDHVKGQATREDREREKEWTNTHLVSYTWVQDEFLPNPE 129
BLAST of mRNA_E-fasciculatus_F_contig15239.3700.1 vs. uniprot
Match: A0A6G0XRT9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XRT9_9STRA) HSP 1 Score: 132 bits (331), Expect = 1.050e-33 Identity = 57/94 (60.64%), Postives = 76/94 (80.85%), Query Frame = 1
Query: 1 VRASRLPDDVPLLQRLVDDGLIVSTPPQDYDDSYCIKYAMAREGYVVTNDLYRDHVKGIEGRKKADAARRWIKSHSISYTFVGDEFFPNPDFSF 282
V S++PDDV LLQ +V +GL+++TPPQDYDDSYCI+YA +G +VTND++RDHV+ I+ + +A R W+KSH IS+T+VGDEFFPNPDF F
Sbjct: 817 VSPSKVPDDVTLLQSMVLEGLVIATPPQDYDDSYCIQYAGTHDGCLVTNDMFRDHVENIKSNAQRNAMRDWLKSHRISFTWVGDEFFPNPDFRF 910
BLAST of mRNA_E-fasciculatus_F_contig15239.3700.1 vs. uniprot
Match: A0A835YPQ7_9STRA (Zc3h12a-like ribonuclease NYN domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPQ7_9STRA) HSP 1 Score: 130 bits (327), Expect = 3.680e-33 Identity = 57/87 (65.52%), Postives = 66/87 (75.86%), Query Frame = 1
Query: 22 DDVPLLQRLVDDGLIVSTPPQDYDDSYCIKYAMAREGYVVTNDLYRDHVKGIEGRKKADAARRWIKSHSISYTFVGDEFFPNPDFSF 282
+D LLQ +VD+GL+V TP DYDDSYCI Y M G VVTND YRDH ++G KK +AARRW+K H+ISYTFVGDEF PNPDF F
Sbjct: 1140 EDTALLQAMVDEGLVVPTPAGDYDDSYCIAYCMQHNGCVVTNDQYRDHYAALQGAKKREAARRWVKGHTISYTFVGDEFMPNPDFQF 1226
BLAST of mRNA_E-fasciculatus_F_contig15239.3700.1 vs. uniprot
Match: A0A1V9YYR1_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YYR1_9STRA) HSP 1 Score: 130 bits (326), Expect = 5.010e-33 Identity = 62/96 (64.58%), Postives = 78/96 (81.25%), Query Frame = 1
Query: 1 VRASRLPDDVPLLQRLVDDGLIVSTPPQDYDDSYCIKYAMAREGYVVTNDLYRDHVKGIE--GRKKADAARRWIKSHSISYTFVGDEFFPNPDFSF 282
V S+LPDDV LLQ +V +G I++TPPQDYDDSYCI+YA +G VVTNDL+RDHV+G+ G+KKA A R+W+ +H IS+T+VGDEFFPNPDF F
Sbjct: 1095 VNPSKLPDDVALLQSMVLEGTIIATPPQDYDDSYCIQYAGHHDGCVVTNDLFRDHVEGMNASGQKKA-AMRQWLAAHRISFTWVGDEFFPNPDFRF 1189
BLAST of mRNA_E-fasciculatus_F_contig15239.3700.1 vs. uniprot
Match: A0A067CRV2_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CRV2_SAPPC) HSP 1 Score: 128 bits (321), Expect = 2.340e-32 Identity = 59/97 (60.82%), Postives = 76/97 (78.35%), Query Frame = 1
Query: 1 VRASRLPDDVPLLQRLVDDGLIVSTPPQDYDDSYCIKYAMAREGYVVTNDLYRDHVKGIEGRKKADAA-RRWIKSHSISYTFVGDEFFPNPDFSFHQ 288
V S+LPDDV LLQ +V +G +++TPPQDYDDSYCI+YA +G VVTNDL+RDHV G++G + AA R+W+ +H IS+T+VGDEF PNPDF F Q
Sbjct: 790 VSPSKLPDDVGLLQSMVLEGTVIATPPQDYDDSYCIQYAGRHDGCVVTNDLFRDHVDGLQGTGQQKAAMRQWLSAHCISFTWVGDEFLPNPDFRFPQ 886
BLAST of mRNA_E-fasciculatus_F_contig15239.3700.1 vs. uniprot
Match: T0QIU5_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QIU5_SAPDV) HSP 1 Score: 128 bits (321), Expect = 2.340e-32 Identity = 58/95 (61.05%), Postives = 75/95 (78.95%), Query Frame = 1
Query: 1 VRASRLPDDVPLLQRLVDDGLIVSTPPQDYDDSYCIKYAMAREGYVVTNDLYRDHVKGIEGRKKADAA-RRWIKSHSISYTFVGDEFFPNPDFSF 282
V S+LPDDV LLQ +V +G +++TPPQDYDDSYCI+YA +G VVTNDL+RDHV G++G + AA R+W+ +H IS+T+VGDEF PNPDF F
Sbjct: 804 VSPSKLPDDVGLLQSMVLEGTVIATPPQDYDDSYCIQYAGRHDGCVVTNDLFRDHVDGLQGNGQTKAAMRQWLSAHCISFTWVGDEFLPNPDFRF 898 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15239.3700.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15239.3700.1 >prot_E-fasciculatus_F_contig15239.3700.1 ID=prot_E-fasciculatus_F_contig15239.3700.1|Name=mRNA_E-fasciculatus_F_contig15239.3700.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=96bp VRASRLPDDVPLLQRLVDDGLIVSTPPQDYDDSYCIKYAMAREGYVVTNDback to top mRNA from alignment at E-fasciculatus_F_contig15239:519..1438- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15239.3700.1 ID=mRNA_E-fasciculatus_F_contig15239.3700.1|Name=mRNA_E-fasciculatus_F_contig15239.3700.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=920bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15239:519..1438- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15239:519..1438- >mRNA_E-fasciculatus_F_contig15239.3700.1 ID=mRNA_E-fasciculatus_F_contig15239.3700.1|Name=mRNA_E-fasciculatus_F_contig15239.3700.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=576bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15239:519..1438- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |