mRNA_E-fasciculatus_F_contig15219.3691.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig15219.3691.1
Unique NamemRNA_E-fasciculatus_F_contig15219.3691.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15219.3691.1 vs. uniprot
Match: A0A6H5J742_9PHAE (B2-adapt-app_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J742_9PHAE)

HSP 1 Score: 500 bits (1287), Expect = 1.970e-169
Identity = 259/263 (98.48%), Postives = 261/263 (99.24%), Query Frame = 1 
Query:    1 KTENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDANDPNPLIRALSVRTMGCIRVEKITEYLCEPLRKALRDDDPYVRKTAAVCVAKLYDINADLVEDQGFLQILRDLICDPNPTVVANAVAALSEIGDTSGRDVMEIDTSVLQKLLAALNECTEWGQVFILDSLAKYTPTDGREAEGIIERVTPRLQHANSAVVMSAVKVVLTYLDSVTSVDTSRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKV 789
            +TENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDANDPNPLIRAL+VRTMGCIRVEKITEYLCEPLRKALRDDDPYVRKTAAVCVAKLYDINADLVEDQGFLQILRDLICDPNPTVVANAVAALSEIGDTSGRDVMEIDTSVLQKLLAALNECTEWGQVFILDSLAKYTP DGREAEGIIERVTPRLQHANSAVVMSAVKVVLTYLDSV SVDTSRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKV
Sbjct:   19 QTENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVEKITEYLCEPLRKALRDDDPYVRKTAAVCVAKLYDINADLVEDQGFLQILRDLICDPNPTVVANAVAALSEIGDTSGRDVMEIDTSVLQKLLAALNECTEWGQVFILDSLAKYTPADGREAEGIIERVTPRLQHANSAVVMSAVKVVLTYLDSVNSVDTSRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKV 281
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15219.3691.1 vs. uniprot
Match: A0A836CH70_9STRA (Coatomer protein complex, beta sub-unit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH70_9STRA)

HSP 1 Score: 458 bits (1178), Expect = 1.040e-152
Identity = 235/263 (89.35%), Postives = 247/263 (93.92%), Query Frame = 1 
Query:    1 KTENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDANDPNPLIRALSVRTMGCIRVEKITEYLCEPLRKALRDDDPYVRKTAAVCVAKLYDINADLVEDQGFLQILRDLICDPNPTVVANAVAALSEIGDTSGRDVMEIDTSVLQKLLAALNECTEWGQVFILDSLAKYTPTDGREAEGIIERVTPRLQHANSAVVMSAVKVVLTYLDSVTSVDTSRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKV 789
            +TENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDA DPNPLIRAL+VRTMGCIRVEKITEYLCEPLR+ALRDDDPYVRKTAAVCVAKLYDINA LVEDQGFLQ+LRDL+CDPNPTVVANAVAALSEI DT G+DVM+I T+ LQKLLAALNECTEWGQVFILDSLAKY P DG EAEGIIERVTPRLQHANSAVVMSAVKV+L+YLD +T+ DT R FSRKLAPPLVTLLNSEPE QYVALRNINLIVQKRP ILE EIKV
Sbjct:   69 QTENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDAKDPNPLIRALAVRTMGCIRVEKITEYLCEPLRRALRDDDPYVRKTAAVCVAKLYDINAGLVEDQGFLQVLRDLVCDPNPTVVANAVAALSEITDTGGKDVMQITTATLQKLLAALNECTEWGQVFILDSLAKYDPVDGVEAEGIIERVTPRLQHANSAVVMSAVKVILSYLDLITNKDTERVFSRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPKILEHEIKV 331
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15219.3691.1 vs. uniprot
Match: A0A7S2H873_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H873_9STRA)

HSP 1 Score: 418 bits (1074), Expect = 2.990e-143
Identity = 216/267 (80.90%), Postives = 239/267 (89.51%), Query Frame = 1 
Query:    1 KTENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDANDPNPLIRALSVRTMGCIRVEKITEYLCEPLRKALRDDDPYVRKTAAVCVAKLYDINADLVEDQGFLQILRDLICDPNPTVVANAVAALSEIGDTSGRDVMEIDTSVLQKLLAALNECTEWGQVFILDSLAKYTPTDGREAEGIIERVTPRLQHANSAVVMSAVKVVLTYLD----SVTSVDTSRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKV 789
            +T NIELKKLVYLYLINYAK+QPELTLLAVNTFVKDANDPNPLIRAL+VRTMGCIRV++ITEYLCEPL +ALRD+DPYVRKTAAVCVAKLYDI   LV+++GFL++L DLI D NP+VVAN VAALSEI +TSGRDVM+I  +VLQKLLAALNECTEWGQVFILDSLAKYTP D REAEGIIERVTPRLQHANSAVVMSAVKV+L Y++    S  + D  R+ +RKLAPPLVTLLNSEPE QYVALRNINLIVQKRP ILE EI+V
Sbjct:   71 QTGNIELKKLVYLYLINYAKSQPELTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVDRITEYLCEPLSRALRDEDPYVRKTAAVCVAKLYDIAPGLVQERGFLEVLHDLISDSNPSVVANGVAALSEIAETSGRDVMKISAAVLQKLLAALNECTEWGQVFILDSLAKYTPADAREAEGIIERVTPRLQHANSAVVMSAVKVILAYMEVMGSSGANADAIRNLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPNILEDEIRV 337
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15219.3691.1 vs. uniprot
Match: A0A7S1VQ66_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VQ66_9STRA)

HSP 1 Score: 427 bits (1097), Expect = 4.880e-141
Identity = 217/263 (82.51%), Postives = 241/263 (91.63%), Query Frame = 1 
Query:    1 KTENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDANDPNPLIRALSVRTMGCIRVEKITEYLCEPLRKALRDDDPYVRKTAAVCVAKLYDINADLVEDQGFLQILRDLICDPNPTVVANAVAALSEIGDTSGRDVMEIDTSVLQKLLAALNECTEWGQVFILDSLAKYTPTDGREAEGIIERVTPRLQHANSAVVMSAVKVVLTYLDSVTSVDTSRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKV 789
            +T NIELKKLVYLYLINYAK+QPELTLLAVNTFVKDA+DPNPLIRAL+VRTMGCIRV++ITEYLCEPL +ALRD+DPYVRKTAAVCVAKLYDI  DLV+++GFL +L DLI D NP+VVAN VAALSEI +TSGRDVM+I   VLQKLLAALNECTEWGQVFILDSLAKYTP DGREAEGIIERVTPRLQHAN+AVVMSAVKV+L Y+D++ + D  R+ +RKLAPPLVTLLNSEPE QYVALRNINLIVQKRP ILE+EIKV
Sbjct:   70 QTGNIELKKLVYLYLINYAKSQPELTLLAVNTFVKDASDPNPLIRALAVRTMGCIRVDRITEYLCEPLSRALRDEDPYVRKTAAVCVAKLYDIAPDLVQERGFLDVLHDLISDSNPSVVANGVAALSEISETSGRDVMKISAGVLQKLLAALNECTEWGQVFILDSLAKYTPADGREAEGIIERVTPRLQHANAAVVMSAVKVILNYMDALQNSDAIRNLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPNILENEIKV 332
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15219.3691.1 vs. uniprot
Match: A0A6U3VDL9_9STRA (AP complex subunit beta n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3VDL9_9STRA)

HSP 1 Score: 418 bits (1074), Expect = 8.870e-140
Identity = 215/265 (81.13%), Postives = 239/265 (90.19%), Query Frame = 1 
Query:    1 KTENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDANDPNPLIRALSVRTMGCIRVEKITEYLCEPLRKALRDDDPYVRKTAAVCVAKLYDINADLVEDQGFLQILRDLICDPNPTVVANAVAALSEIGDTSGRDVMEIDTSVLQKLLAALNECTEWGQVFILDSLAKYTPTDGREAEGIIERVTPRLQHANSAVVMSAVKVVLTYLDSV--TSVDTSRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKV 789
            +T NIELKKLVYLYLINYAK+QPELTLLAVNTFVKDANDPNPLIRAL+VRTMGCIRV++ITEYLCEPL +ALRD+DPYVRKTAAVCVAKLYDI   LV+++GFL++L DLI D NP+VVAN VAALSEI +TSGRDVM+I  +VLQKLLAALNECTEWGQVFILDSLAKYTP D REAEGIIERVTPRLQHANSAVVMSAVKV+L Y++ +   + D  R+ +RKLAPPLVTLLNSEPE QYVALRNINLIVQKRP ILE EI+V
Sbjct:   70 QTGNIELKKLVYLYLINYAKSQPELTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVDRITEYLCEPLSRALRDEDPYVRKTAAVCVAKLYDIAPGLVQERGFLEVLHDLISDSNPSVVANGVAALSEIAETSGRDVMKISAAVLQKLLAALNECTEWGQVFILDSLAKYTPADAREAEGIIERVTPRLQHANSAVVMSAVKVILAYMEVMGGANADAIRNLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPNILEDEIRV 334
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15219.3691.1 vs. uniprot
Match: A0A7S1FVF1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FVF1_9STRA)

HSP 1 Score: 422 bits (1086), Expect = 1.590e-139
Identity = 215/263 (81.75%), Postives = 242/263 (92.02%), Query Frame = 1 
Query:    1 KTENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDANDPNPLIRALSVRTMGCIRVEKITEYLCEPLRKALRDDDPYVRKTAAVCVAKLYDINADLVEDQGFLQILRDLICDPNPTVVANAVAALSEIGDTSGRDVMEIDTSVLQKLLAALNECTEWGQVFILDSLAKYTPTDGREAEGIIERVTPRLQHANSAVVMSAVKVVLTYLDSVTSVDTSRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKV 789
            +T NIELKKLVYLYLINYAK+QPELTLLAVNTFVKDANDPNPLIRAL+VRTMGCIRV++ITEYLCEPL +ALRD+DPYVRKTAAVCVAKLYD+  +LVE++GFL+ L DLI D NP+VVAN+VAALSE+ +TSGRDVM + +SVLQKLLAALNECTEWGQVFILDSLAKY P DG+EAEGIIERVTPRLQHANSAVVMSAVKV+L+Y++ V + DT R+ +RKLAPPLVTLLNSE E QYVALRNINLIVQKRP ILE+EIKV
Sbjct:   57 QTGNIELKKLVYLYLINYAKSQPELTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVDRITEYLCEPLSRALRDEDPYVRKTAAVCVAKLYDVAPNLVEERGFLETLHDLISDSNPSVVANSVAALSEVAETSGRDVMRVSSSVLQKLLAALNECTEWGQVFILDSLAKYAPRDGQEAEGIIERVTPRLQHANSAVVMSAVKVILSYMELVANQDTIRNLTRKLAPPLVTLLNSEAEIQYVALRNINLIVQKRPHILENEIKV 319
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15219.3691.1 vs. uniprot
Match: A0A7S3LFQ5_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LFQ5_9STRA)

HSP 1 Score: 422 bits (1085), Expect = 3.110e-139
Identity = 219/265 (82.64%), Postives = 242/265 (91.32%), Query Frame = 1 
Query:    1 KTENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDANDPNPLIRALSVRTMGCIRVEKITEYLCEPLRKALRDDDPYVRKTAAVCVAKLYDINADLVEDQGFLQILRDLICDPNPTVVANAVAALSEIGDTSGRDVMEIDTSVLQKLLAALNECTEWGQVFILDSLAKYTPTDGREAEGIIERVTPRLQHANSAVVMSAVKVVLTYLDSVTSV--DTSRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKV 789
            +T NIELKKLVYLYLINYAKTQPELTLLAVNTFVKDA+D NPLIRAL+VRTMGCIRV++ITEYLCEPL +ALRDDDPYVRKTAAVCVAKLYDIN +LV ++GFL++L DLI D NP+VVAN VAALSEI +TSG+DVM+I  SVLQKLLAALNECTEWGQVFILDSLAKYTP DGREAEGIIERVTPRLQHANSAVVMSAVKV+L+Y++ + S   D+ R  +RKLAPPLVTLLNSEPE QYVALRNINLIVQKRP ILE+EIKV
Sbjct:   62 QTGNIELKKLVYLYLINYAKTQPELTLLAVNTFVKDASDANPLIRALAVRTMGCIRVDRITEYLCEPLSRALRDDDPYVRKTAAVCVAKLYDINPELVVERGFLEVLHDLISDSNPSVVANGVAALSEIAETSGKDVMKISASVLQKLLAALNECTEWGQVFILDSLAKYTPADGREAEGIIERVTPRLQHANSAVVMSAVKVILSYMELMGSANSDSIRHLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPHILENEIKV 326
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15219.3691.1 vs. uniprot
Match: A0A7S3PZD9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZD9_9STRA)

HSP 1 Score: 419 bits (1078), Expect = 6.560e-138
Identity = 217/265 (81.89%), Postives = 244/265 (92.08%), Query Frame = 1 
Query:    1 KTENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDANDPNPLIRALSVRTMGCIRVEKITEYLCEPLRKALRDDDPYVRKTAAVCVAKLYDINADLVEDQGFLQILRDLICDPNPTVVANAVAALSEIGDTSGRDVMEIDTSVLQKLLAALNECTEWGQVFILDSLAKYTPTDGREAEGIIERVTPRLQHANSAVVMSAVKVVLTYLDSV--TSVDTSRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKV 789
            +T NIELKKLVYLYLINYAK+QPELTLLAVNTFVKDA+DPNPLIRAL+VRTMGCIRV++ITEYLC+PL +ALRD+DPYVRKTAAVCVAKLYDI   LV+++GFL+IL DLI D NP+VVAN VAALSEI +TSG+DVM+I TSVLQKLLAALNECTEWGQVFILDSLAKYTP D REAEGIIERVTPRLQHANSAVVMSAVKV+L+Y++ +  ++ DT R+ +RKLAPPLVTLLNSEPE QYVALRNINLIVQKRP ILE+EIKV
Sbjct:   72 QTGNIELKKLVYLYLINYAKSQPELTLLAVNTFVKDASDPNPLIRALAVRTMGCIRVDRITEYLCDPLSRALRDEDPYVRKTAAVCVAKLYDIAPALVQERGFLEILHDLISDSNPSVVANGVAALSEIAETSGKDVMKISTSVLQKLLAALNECTEWGQVFILDSLAKYTPADAREAEGIIERVTPRLQHANSAVVMSAVKVILSYMELMGNSNSDTIRNLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPTILENEIKV 336
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15219.3691.1 vs. uniprot
Match: A0A7S2WFD7_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFD7_9STRA)

HSP 1 Score: 419 bits (1078), Expect = 7.970e-138
Identity = 214/263 (81.37%), Postives = 239/263 (90.87%), Query Frame = 1 
Query:    1 KTENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDANDPNPLIRALSVRTMGCIRVEKITEYLCEPLRKALRDDDPYVRKTAAVCVAKLYDINADLVEDQGFLQILRDLICDPNPTVVANAVAALSEIGDTSGRDVMEIDTSVLQKLLAALNECTEWGQVFILDSLAKYTPTDGREAEGIIERVTPRLQHANSAVVMSAVKVVLTYLDSVTSVDTSRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKV 789
            +T NIELKKLVYLYLINYAKTQPE  LLAVNTFVKDANDPNPLIRAL+VRTMGCIRVE+ITEYLCEPL++ L DDDPYVRKTAA+CVAKL+DI  D+VE++GFL++LRD + D NPTVVANA+AAL+EI + SGRDVM + TSVLQKLLAALNECTEWGQVFILD+LAKYTP +G+EAEGIIERVTPRLQHANSAVVMSAVK+VL+Y+D +TS DT R  SRKLAPPLVTLLNSE E Q+VALRNINLIVQKRP ILE EIKV
Sbjct:   71 QTNNIELKKLVYLYLINYAKTQPETALLAVNTFVKDANDPNPLIRALAVRTMGCIRVERITEYLCEPLQRCLSDDDPYVRKTAAICVAKLHDIAPDMVEERGFLEMLRDRVGDSNPTVVANAIAALNEIQEASGRDVMMMTTSVLQKLLAALNECTEWGQVFILDALAKYTPANGQEAEGIIERVTPRLQHANSAVVMSAVKIVLSYMDLITSEDTVRQLSRKLAPPLVTLLNSEAEIQFVALRNINLIVQKRPQILEHEIKV 333
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15219.3691.1 vs. uniprot
Match: A0A1Z5K9X8_FISSO (AP-1 complex subunit beta-1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9X8_FISSO)

HSP 1 Score: 417 bits (1072), Expect = 1.770e-137
Identity = 216/265 (81.51%), Postives = 241/265 (90.94%), Query Frame = 1 
Query:    1 KTENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDANDPNPLIRALSVRTMGCIRVEKITEYLCEPLRKALRDDDPYVRKTAAVCVAKLYDINADLVEDQGFLQILRDLICDPNPTVVANAVAALSEIGDTSGRDVMEIDTSVLQKLLAALNECTEWGQVFILDSLAKYTPTDGREAEGIIERVTPRLQHANSAVVMSAVKVVLTYLDSVTSV--DTSRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKV 789
            +T NIELKKLVYLYLINY+KTQPELTLLAVNTFVKDA+D NPLIRAL+VRTMGCIRV++ITEYLC+PL +ALRD+DPYVRKTAAVCVAKLYDI  DLVE++GF++IL DLI D NP+VVAN VAALSEI ++SG+DVM I  SVLQKLLAALNECTEWGQVFILDSLAKYTP DGREAEGIIERVTPRLQHANSAVVMSAVKV+L+Y++ + S   D  R+ +RKLAPPLVTLLNSEPE QYVALRNINLIVQKRP ILE+EIKV
Sbjct:   45 QTGNIELKKLVYLYLINYSKTQPELTLLAVNTFVKDASDSNPLIRALAVRTMGCIRVDRITEYLCDPLSRALRDEDPYVRKTAAVCVAKLYDIAPDLVEERGFIEILHDLISDSNPSVVANGVAALSEIAESSGKDVMRITASVLQKLLAALNECTEWGQVFILDSLAKYTPADGREAEGIIERVTPRLQHANSAVVMSAVKVILSYMELMGSQNSDAIRALTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPNILENEIKV 309
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15219.3691.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J742_9PHAE1.970e-16998.48B2-adapt-app_C domain-containing protein n=2 Tax=E... [more]
A0A836CH70_9STRA1.040e-15289.35Coatomer protein complex, beta sub-unit n=1 Tax=Tr... [more]
A0A7S2H873_9STRA2.990e-14380.90Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]
A0A7S1VQ66_9STRA4.880e-14182.51Hypothetical protein n=2 Tax=Grammatophora oceanic... [more]
A0A6U3VDL9_9STRA8.870e-14081.13AP complex subunit beta n=1 Tax=Ditylum brightwell... [more]
A0A7S1FVF1_9STRA1.590e-13981.75Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7S3LFQ5_9STRA3.110e-13982.64Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S3PZD9_9STRA6.560e-13881.89Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2WFD7_9STRA7.970e-13881.37Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A1Z5K9X8_FISSO1.770e-13781.51AP-1 complex subunit beta-1 n=2 Tax=Fistulifera so... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15219contigE-fasciculatus_F_contig15219:210..3017 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score503.4
Seed ortholog evalue6.4e-140
Seed eggNOG ortholog2880.D8LDW2
KEGG koko:K11825,ko:K12392
KEGG Pathwayko04142,ko04144,ko04721,ko04961,ko05016,map04142,map04144,map04721,map04961,map05016
GOsGO:0000278,GO:0000281,GO:0000910,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005798,GO:0005886,GO:0005905,GO:0005911,GO:0006950,GO:0006970,GO:0006971,GO:0006996,GO:0007033,GO:0007049,GO:0007154,GO:0008150,GO:0009267,GO:0009506,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0012505,GO:0012506,GO:0012510,GO:0016020,GO:0016043,GO:0016050,GO:0022402,GO:0030054,GO:0030117,GO:0030118,GO:0030119,GO:0030120,GO:0030121,GO:0030122,GO:0030125,GO:0030128,GO:0030130,GO:0030131,GO:0030132,GO:0030133,GO:0030135,GO:0030136,GO:0030139,GO:0030140,GO:0030587,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0030665,GO:0030666,GO:0030669,GO:0031090,GO:0031152,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031982,GO:0032502,GO:0032991,GO:0033298,GO:0033554,GO:0042594,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0044764,GO:0045334,GO:0048475,GO:0048856,GO:0050896,GO:0051301,GO:0051703,GO:0051704,GO:0051716,GO:0055044,GO:0061640,GO:0071496,GO:0071840,GO:0071944,GO:0090702,GO:0097708,GO:0098588,GO:0098630,GO:0098743,GO:0098796,GO:0098797,GO:0098805,GO:0099120,GO:1903047
EggNOG free text desc.intracellular protein transport
EggNOG OGsCOG5096@1,KOG1061@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Hectar predicted targeting categoryother localisation
Exons5
Model size807
Cds size807
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15219.3691.1prot_E-fasciculatus_F_contig15219.3691.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig15219 210..3017 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928004.439921-CDS-E-fasciculatus_F_contig15219:209..4341622928004.439921-CDS-E-fasciculatus_F_contig15219:209..434Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15219 210..434 +
1695995784.7570016-CDS-E-fasciculatus_F_contig15219:209..4341695995784.7570016-CDS-E-fasciculatus_F_contig15219:209..434Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15219 210..434 +
1622928004.464554-CDS-E-fasciculatus_F_contig15219:633..7591622928004.464554-CDS-E-fasciculatus_F_contig15219:633..759Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15219 634..759 +
1695995784.7703097-CDS-E-fasciculatus_F_contig15219:633..7591695995784.7703097-CDS-E-fasciculatus_F_contig15219:633..759Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15219 634..759 +
1622928004.478452-CDS-E-fasciculatus_F_contig15219:1174..13031622928004.478452-CDS-E-fasciculatus_F_contig15219:1174..1303Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15219 1175..1303 +
1695995784.7798657-CDS-E-fasciculatus_F_contig15219:1174..13031695995784.7798657-CDS-E-fasciculatus_F_contig15219:1174..1303Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15219 1175..1303 +
1622928004.4932914-CDS-E-fasciculatus_F_contig15219:1959..20851622928004.4932914-CDS-E-fasciculatus_F_contig15219:1959..2085Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15219 1960..2085 +
1695995784.7893367-CDS-E-fasciculatus_F_contig15219:1959..20851695995784.7893367-CDS-E-fasciculatus_F_contig15219:1959..2085Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15219 1960..2085 +
1622928004.5085447-CDS-E-fasciculatus_F_contig15219:2816..30171622928004.5085447-CDS-E-fasciculatus_F_contig15219:2816..3017Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15219 2817..3017 +
1695995784.8002293-CDS-E-fasciculatus_F_contig15219:2816..30171695995784.8002293-CDS-E-fasciculatus_F_contig15219:2816..3017Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15219 2817..3017 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig15219.3691.1

>prot_E-fasciculatus_F_contig15219.3691.1 ID=prot_E-fasciculatus_F_contig15219.3691.1|Name=mRNA_E-fasciculatus_F_contig15219.3691.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=269bp
KTENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDANDPNPLIRALSVR
TMGCIRVEKITEYLCEPLRKALRDDDPYVRKTAAVCVAKLYDINADLVED
QGFLQILRDLICDPNPTVVANAVAALSEIGDTSGRDVMEIDTSVLQKLLA
ALNECTEWGQVFILDSLAKYTPTDGREAEGIIERVTPRLQHANSAVVMSA
VKVVLTYLDSVTSVDTSRSFSRKLAPPLVTLLNSEPETQYVALRNINLIV
QKRPGILESEIKVCANRG*
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mRNA from alignment at E-fasciculatus_F_contig15219:210..3017+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig15219.3691.1 ID=mRNA_E-fasciculatus_F_contig15219.3691.1|Name=mRNA_E-fasciculatus_F_contig15219.3691.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2808bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15219:210..3017+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AAAACAGAAAACATCGAGCTGAAGAAGCTGGTGTACCTGTACCTGATCAA
CTACGCGAAGACGCAGCCGGAGCTGACGCTGCTGGCGGTGAACACGTTCG
TCAAGGACGCCAACGACCCGAACCCTCTCATCCGCGCCCTGTCCGTGCGG
ACCATGGGCTGCATCCGGGTGGAGAAGATCACGGAGTACCTGTGCGAGCC
GCTGAGGAAAGCTCTGCGAGACGACGTGAGTTGGTTTTTTATTGCTTGCC
TTATATTTCGTTATTTCCTTCGTTCTCGGAGCGCGATGTGTTGCACGGGG
GCTGATTGGATGTTTTTTCGTGTGCGGACGGGTCAATTTATTTGTACTTG
AGCTTTCCTGCGGCCTCGCTGCCCGTCTCTCTCGGCTGGTGCTGCTGCTG
CCCCTGCTACTGCTGCCTCTGCAGGACCCCTACGTGCGTAAGACGGCCGC
GGTGTGCGTGGCCAAGCTGTACGACATCAACGCCGACCTGGTGGAGGACC
AGGGTTTCCTGCAGATCCTGAGGGATCTCATCTGCGACCCCAACCCGACG
GTGAGTGGTTTCGCCCGGGGCAAAGCACTTCTTGTTTTTCGGAGATATAC
ATGTAGGGTATCTGATGCAAGTTGTCGAATGTGTTTCTTTCTGCGTACGG
TTTCGTGTCAATGGGATGTAATGTCGATTGGTGGAGTGGTTTCACCCCTT
ATCGGATGGCGTGTGGTGTCCTGTCGGCGACACAGGTGTCCTCATCGTCT
GTTTTGTTTCGTTCTGTGGTCAATTCGTTCCATGGCTCACATGACCTTCG
TATCTCTTGTCTGCCGCTCTGACTGTATGTCTGTCGCTCTGCTTGTCTGC
CTACCCATCTGTGTGTCTGTCTGTCGCTGTCCTCACCACCCCCTGCTATG
TCTGTGCCCCCCCCTCCCCCTTTCTGTCTGCCTGCCTTGGTCTATTGCTG
GCGGGTTCGGAGAAGGTGGTGGCAAACGCGGTGGCAGCTCTTTCGGAGAT
CGGGGACACGTCGGGGCGAGACGTGATGGAGATCGACACTTCGGTGCTGC
AGAAGCTCTTGGCTGCTCTCAACGAGTGCACCGAGTGGGGCCAGGTGAAC
AAAAGCAGCGGGTGCTGGCTAACAAGCCTATCAAGAGAACAAGAACCACC
ACCACAAGGCACCTAGCCATGTTCTTGCATGACAGCGCGGCAAAGTAGTT
AGAATATGCCCCTGCGTGGACGAGGCACACGACTACTGCACGAAGGGCTG
CCTGGGATGGCATGGTGATCTTGTTGGTGTTTGGGACGGCGCGAGGAAGG
GGCGCGCCATCGAGCTGCTGGATATGCTTCACGGCTTTCCCTGGGCCGTT
TTGTTTGTCTCTGAACCCTCAGGTTTTCAAACCCATCACGATTTGCAATC
GAGTCCCCTTCATCGGCGAAGTATGCACTGCACGTGCCGCCGGATAACTC
CGGATGTTGTTGTCATTGGCGCGGTGATACCGACCACTCGGATACAAGCC
CGAATACTACCGCCGTGGTATTTTACCTATTGTTGCAAACAGCGTGGAAT
TGTTGTTGCCGCTGTCCTCCCTTACCTCTGCCACCCCTTTCACCACCACG
GGCTTCTGACCCTTGGGAGAGAGTCTCACATATGACGTTAATGTCGGTTG
ACGTTTACCCACCCTGGCACTTCCGCCGCTGTCCCTGCTGCCGCTGCTGG
CCAATGGGACGGATTGGTTGTCATTTGTTGTGTTGTGTTCTGTCTGCCAG
GTGTTCATCTTGGACTCCTTGGCGAAGTACACGCCCACGGACGGGCGGGA
GGCTGAGGGCATAATCGAGAGGGTCACGCCGCGCCTCCAGCACGCCAACT
CGGCGGTGGTCATGTCGGCCGTTAAGGTGCTTTTTTTCTGCTTGTGTGTT
GATTTTTGGTCGGGGCGTGAAATATGTATGTTTTGGTCGAATTTCTTGGT
CGGTTGGCGTTGGGCGTGTGCTCATCGATGGTACAACAGAAGTAGAAGAG
GGTTTTCGCCCGTGCTGCCGGTTTGTCTGCTGCCGGTTTGTCTGCTGCCG
GTTTGTCTGCATCGCTTGTTCTTTCCTGGTTGCTTTCTTGTTTCGTTTGC
GTGCCCCCCCCCTTTTGCCCGCGGTTTTGGTTTATATCGACGAAGCAACA
CGTGCGCGCGCGTTTGTTTTTGTTGTTGTTGGTCAGTCGTTGTGTCCTCC
CCCCTTTCGTTTCGTGTGCGACACGTGCGCGCTTACTCGCCGGGTGCTAC
CGGTCGGCGTGTGGCTTTTCACGCTTGTGTGGTTGGTTTCCAGTTCCCGG
TCGCACCTTTCGGCTGTGCTATTGTAGATTGTACTGCCCCCCTCTTCCTC
TCCCCGGTTTCGGTCTGTCTCTCCGTCGCACGTGTACTCTCTCCATATGT
TTGTCTGCGCACCCCTCCTTTCTCTCGTCTCTTCCCCTCTCTGCTGCTGC
TGCTGCTGCTGCTGCTGCTGCTGCTGCGCCGCCCTCTTCCTCGCGCCTAG
CCGAACCCTTGTATCATCACTTTGTTTCGGTGCACCCTTGTGCGCTCGGC
ACACCTTCACGATAGCTCCCGCCCCTCCATACGAACTCGTCCGCCCCCTC
GCCTCAGGTTGTGCTGACGTACTTGGATAGCGTCACGAGCGTCGACACGA
GCCGGTCCTTCAGCCGCAAGCTGGCGCCGCCTCTCGTGACGCTGCTCAAC
TCGGAGCCCGAGACGCAGTACGTGGCCCTCCGCAACATTAACCTTATCGT
ACAGAAGCGGCCCGGCATCCTCGAGTCCGAGATAAAGGTTTGTGCGAATC
GGGGCTGA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15219:210..3017+

>mRNA_E-fasciculatus_F_contig15219.3691.1 ID=mRNA_E-fasciculatus_F_contig15219.3691.1|Name=mRNA_E-fasciculatus_F_contig15219.3691.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1614bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15219:210..3017+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AAAACAGAAAACATCGAGCTGAAGAAGCTGGTGTACCTGTACCTGATCAA
CTACGCGAAGACGCAGCCGGAGCTGACGCTGCTGGCGGTGAACACGTTCG
TCAAGGACGCCAACGACCCGAACCCTCTCATCCGCGCCCTGTCCGTGCGG
ACCATGGGCTGCATCCGGGTGGAGAAGATCACGGAGTACCTGTGCGAGCC
GCTGAGGAAAGCTCTGCGAGACGACAAAACAGAAAACATCGAGCTGAAGA
AGCTGGTGTACCTGTACCTGATCAACTACGCGAAGACGCAGCCGGAGCTG
ACGCTGCTGGCGGTGAACACGTTCGTCAAGGACGCCAACGACCCGAACCC
TCTCATCCGCGCCCTGTCCGTGCGGACCATGGGCTGCATCCGGGTGGAGA
AGATCACGGAGTACCTGTGCGAGCCGCTGAGGAAAGCTCTGCGAGACGAC
GACCCCTACGTGCGTAAGACGGCCGCGGTGTGCGTGGCCAAGCTGTACGA
CATCAACGCCGACCTGGTGGAGGACCAGGGTTTCCTGCAGATCCTGAGGG
ATCTCATCTGCGACCCCAACCCGACGGACCCCTACGTGCGTAAGACGGCC
GCGGTGTGCGTGGCCAAGCTGTACGACATCAACGCCGACCTGGTGGAGGA
CCAGGGTTTCCTGCAGATCCTGAGGGATCTCATCTGCGACCCCAACCCGA
CGGTGGTGGCAAACGCGGTGGCAGCTCTTTCGGAGATCGGGGACACGTCG
GGGCGAGACGTGATGGAGATCGACACTTCGGTGCTGCAGAAGCTCTTGGC
TGCTCTCAACGAGTGCACCGAGTGGGGCCAGGTGGTGGCAAACGCGGTGG
CAGCTCTTTCGGAGATCGGGGACACGTCGGGGCGAGACGTGATGGAGATC
GACACTTCGGTGCTGCAGAAGCTCTTGGCTGCTCTCAACGAGTGCACCGA
GTGGGGCCAGGTGTTCATCTTGGACTCCTTGGCGAAGTACACGCCCACGG
ACGGGCGGGAGGCTGAGGGCATAATCGAGAGGGTCACGCCGCGCCTCCAG
CACGCCAACTCGGCGGTGGTCATGTCGGCCGTTAAGGTGTTCATCTTGGA
CTCCTTGGCGAAGTACACGCCCACGGACGGGCGGGAGGCTGAGGGCATAA
TCGAGAGGGTCACGCCGCGCCTCCAGCACGCCAACTCGGCGGTGGTCATG
TCGGCCGTTAAGGTTGTGCTGACGTACTTGGATAGCGTCACGAGCGTCGA
CACGAGCCGGTCCTTCAGCCGCAAGCTGGCGCCGCCTCTCGTGACGCTGC
TCAACTCGGAGCCCGAGACGCAGTACGTGGCCCTCCGCAACATTAACCTT
ATCGTACAGAAGCGGCCCGGCATCCTCGAGTCCGAGATAAAGGTTTGTGC
GAATCGGGGCTGAGTTGTGCTGACGTACTTGGATAGCGTCACGAGCGTCG
ACACGAGCCGGTCCTTCAGCCGCAAGCTGGCGCCGCCTCTCGTGACGCTG
CTCAACTCGGAGCCCGAGACGCAGTACGTGGCCCTCCGCAACATTAACCT
TATCGTACAGAAGCGGCCCGGCATCCTCGAGTCCGAGATAAAGGTTTGTG
CGAATCGGGGCTGA
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