mRNA_E-fasciculatus_F_contig1520.3679.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1520.3679.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE) HSP 1 Score: 225 bits (574), Expect = 7.570e-63 Identity = 113/166 (68.07%), Postives = 125/166 (75.30%), Query Frame = 1
Query: 1 GNSKCLDAFAVALNQACDGQEKRWYASTLELQLVSLEFCGACRSVQTLHVRVVPHTPPSLWPPRHSHTTPDKRGPEVCISGCVPAVPAIGLTWALPMEFLLRSPALELWTASEGQRLTGPSAAAILGLVIWPQKLKRLVFASDMPVTAATWPASLQQLSFGDTFNQ 498
GNSKCLDAF VALNQACDGQEKRWY STLELQLVSLE CGACR VQTLHVRV P TPPSLW P +HTT + R P+VCIS VP V A GLTWALPM L + A E+ + S +R S+AA L +WPQ+LKR+VF SDM V A+WPASLQQLSFG FNQ
Sbjct: 5 GNSKCLDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLESAVWPQRLKRMVFESDMTVNTASWPASLQQLSFGCGFNQ 170
BLAST of mRNA_E-fasciculatus_F_contig1520.3679.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE) HSP 1 Score: 207 bits (526), Expect = 7.770e-59 Identity = 108/167 (64.67%), Postives = 124/167 (74.25%), Query Frame = 1
Query: 1 GNSKCLDAFAVALNQACDGQEKRWYASTLELQLVSLEFCGACRSVQTLHVRVVPHTPPSLWPPRHSHTTPDKRGPEVCISGCVPAVPAIGLTWALPMEFLLRSPALELWTASEGQRLTGPSAAAILGLVIWPQK-LKRLVFASDMPVTAATWPASLQQLSFGDTFNQ 498
G S+CL AF VALNQ C+GQEKRWYASTLELQLVSLEFCGACR V TLHVRV TP SLW P SH T KR E C+S VPAV A GLTWAL ME LL++ A+EL + S+ +R++G S+ A LG + W Q LKRLVF SDMP + A+WPASL QL FGD F+Q
Sbjct: 13 GRSECLRAFIVALNQTCNGQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKRSREACVSNRVPAVQASGLTWALDMEVLLQTSAVELRSRSKYRRVSGNSSTASLGSMFWLQMMLKRLVFDSDMPASTASWPASLPQLLFGDRFDQ 179
BLAST of mRNA_E-fasciculatus_F_contig1520.3679.1 vs. uniprot
Match: A0A6H5K8K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K9_9PHAE) HSP 1 Score: 188 bits (477), Expect = 4.530e-50 Identity = 99/166 (59.64%), Postives = 113/166 (68.07%), Query Frame = 1
Query: 1 GNSKCLDAFAVALNQACDGQEKRWYASTLELQLVSLEFCGACRSVQTLHVRVVPHTPPSLWPPRHSHTTPDKRGPEVCISGCVPAVPAIGLTWALPMEFLLRSPALELWTASEGQRLTGPSAAAILGLVIWPQKLKRLVFASDMPVTAATWPASLQQLSFGDTFNQ 498
G S+CLDAF VAL QA DG+ KRWY STLELQLVSLEFCGACRS + V++ TP SLW PR SH T KR E CI VPAV A G WALPME LL A EL SE ++ TGPS+A G + W QKL RL+F S+ V + +WPA LQ+LSFGD FNQ
Sbjct: 25 GRSECLDAFIVALKQAGDGRAKRWYVSTLELQLVSLEFCGACRSALSFDVQIHRQTPHSLWSPRKSHGTLKKRSREACIPSRVPAVQANGWMWALPMEILLPRSATELHQVSENRQPTGPSSATSPGRMGWFQKLTRLMFYSERSVNSVSWPACLQELSFGDFFNQ 190
BLAST of mRNA_E-fasciculatus_F_contig1520.3679.1 vs. uniprot
Match: D7FTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI) HSP 1 Score: 168 bits (425), Expect = 8.700e-46 Identity = 88/151 (58.28%), Postives = 99/151 (65.56%), Query Frame = 1
Query: 1 GNSKCLDAFAVALNQACDGQEKRWYASTLELQLVSLEFCGACRSVQTLHVRVVPHTPPSLWPPRHSHTTPDKRGPEVCISGCVPAVPAIGLTWALPMEFLLRSPALELWTASEGQRLTGPSAAAILGLVIWPQKLKRLVFASDMPVTAATW 453
G LD VALNQACDGQEKRWY STLELQLVSLE CGACRS Q LHV V TPP+LW R S TTP +R PEVC S VPAV A+ TWALPM+ L + A E +E + G S AA + V+WP+ LKRLVF+ MP A W
Sbjct: 85 GGGSSLDTLIVALNQACDGQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSSRTSRTTPSQRSPEVCTSNRVPAVQALCWTWALPMDRLPQRAAAEPQPVTERRLQDGHSFAASVESVVWPESLKRLVFSRRMPGKAVWW 235
BLAST of mRNA_E-fasciculatus_F_contig1520.3679.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 144 bits (364), Expect = 6.810e-38 Identity = 73/146 (50.00%), Postives = 93/146 (63.70%), Query Frame = 1
Query: 1 GNSKCLDAFAVALNQACDGQEKRWYASTLELQLVSLEFCGACRSVQTLHVRVVPHTPPSLWPPRHSHTTPDKRGPEVCISGCVPAVPAIGLTWALPMEFLLRSPALELWTASEGQRLTGPSAAAILGLVIWPQKLKRLVFASDMPV 438
G ++ DAFA+AL+QAC+G EKRWY ST ELQL SL+ C ACRS TLHVRV TP SLW P P+ + +V + VP V A+ LTWA ME L++ A+ELW+ SE + GP AA LG V+WP L +LV +D +
Sbjct: 5 GYTRSFDAFAIALSQACEGGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSPPTVQALPNTQSSKVRVVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERLEMVGPLCAASLGSVVWPLGLTQLVLDTDFHI 150
BLAST of mRNA_E-fasciculatus_F_contig1520.3679.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE) HSP 1 Score: 150 bits (380), Expect = 3.300e-36 Identity = 79/149 (53.02%), Postives = 97/149 (65.10%), Query Frame = 1
Query: 7 SKCLDAFAVALNQACDGQEKRWYASTLELQLVSLEFCGACRSVQTLHVRVVPHTPPSLWPPRHSHTTPDKRGPEVCISGCVPAVPAIGLTWALPMEFLLRSPALELWTASEGQRLTGPSAAAILGL-VIWPQKLKRLVFASDMPVTAAT 450
++CLDAF +AL+QAC+G EKRWYASTLELQL SL+ C ACR+ LHV V TP SLW R + T P+ R + IS VP V A+ LTWAL ME LLR A+ELWT SE L G S + LG V+WP+ L +LV +D + T
Sbjct: 9 TRCLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNTRSWNLHISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLGSSCVSSLGSEVVWPRGLTQLVLYTDSDIAMGT 157
BLAST of mRNA_E-fasciculatus_F_contig1520.3679.1 vs. uniprot
Match: A0A6H5K2L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2L2_9PHAE) HSP 1 Score: 144 bits (364), Expect = 3.380e-36 Identity = 85/166 (51.20%), Postives = 101/166 (60.84%), Query Frame = 1
Query: 1 GNSKCLDAFAVALNQACDGQEKRWYASTLELQLVSLEFCGACRSVQTLHVRVVPHTPPSLWPPRHSHTTPDKRGPEVCISGCVPAVPAIGLTWALPMEFLLRSPALELWTASEGQRLTGPSAAAILGLVIWPQKLKRLVFASDMPVTAATWPASLQQLSFGDTFNQ 498
G +C+DAF VALN+ CDG E+RWYASTLELQ VSLEFC ACR V T SH+T G V P V A LTWAL M+ LL+S A+EL S+ +R G S+AA L ++W Q+LKRLV D PV A+WPASLQQLSFG FN+
Sbjct: 15 GRGECVDAFIVALNRTCDGGEQRWYASTLELQPVSLEFCVACRRVPT------------------SHST-STVGRLVSGVSRAPVVRAYSLTWALSMDVLLQSCAMELQRGSKYRRSGGHSSAANLASMLWLQRLKRLVLELDTPVITASWPASLQQLSFGYKFNK 161
BLAST of mRNA_E-fasciculatus_F_contig1520.3679.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE) HSP 1 Score: 146 bits (368), Expect = 1.460e-35 Identity = 81/166 (48.80%), Postives = 100/166 (60.24%), Query Frame = 1
Query: 10 KCLDAFAVALNQACDGQEKRWYASTLELQLVSLEFCGACRSVQTLHVRVVPHTPPSLWPPRHSHTTPDKRGPEVCISGCVPAVPAIGLTWALPMEFLLRSPALELWTASEGQRLTGPSAAAILGLVIWPQKLKRLVFASDM---PVTAATWPASLQQLSFGDTFNQ 498
+CLDAF VAL+Q +G EKRWY STL+LQL SLEFCGACRS LHV V TPP+LW + + P S VPAV A+GLTWA P E L S + ELWT E +L A L V+WPQ L+RLV + P+ +WP+SL+ L+F F+Q
Sbjct: 8 RCLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLW-------SLGQANPTAGTSTRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQVSLCTANLDSVVWPQGLQRLVMDCTVFIIPLEMMSWPSSLKSLTFAGIFDQ 166
BLAST of mRNA_E-fasciculatus_F_contig1520.3679.1 vs. uniprot
Match: A0A6H5L3M5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3M5_9PHAE) HSP 1 Score: 138 bits (347), Expect = 4.180e-32 Identity = 81/165 (49.09%), Postives = 97/165 (58.79%), Query Frame = 1
Query: 13 CLDAFAVALN-QACDGQEKRWYASTLELQLVSLEFCGACRSVQTLHVRVVPHTPPSLWPPRHS--HTTPDKRGPEVCISGCVPAVPAIGLTWALPMEFLLRSPALELWTASEGQRLTGPSAAAILGLVIWPQKLKRLVFASDMPVTAATWPASLQQLSFGDTFNQ 498
CLDAF LN Q+C +KRWY S ELQLVSL+FCG CRS L VRV + PPSLW P S + PD VPAV A G TW++P++ LL+ L W +E R G A L V+WPQ LK+L F D V A+WPASLQ L+FG +FNQ
Sbjct: 103 CLDAFVAVLNHQSCVEGKKRWYTSIRELQLVSLKFCGVCRSTSILRVRVEHNAPPSLWSPTKSFSYALPDAWNR-------VPAVRAYGWTWSIPVDTLLKVCDLRYWAKAELSR-RGSFPEAKLASVVWPQGLKQLEFDLDTAVEKASWPASLQSLTFGCSFNQ 259
BLAST of mRNA_E-fasciculatus_F_contig1520.3679.1 vs. uniprot
Match: D7G0Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z9_ECTSI) HSP 1 Score: 115 bits (289), Expect = 1.760e-27 Identity = 57/75 (76.00%), Postives = 59/75 (78.67%), Query Frame = 1
Query: 7 SKCLDAFAVALNQACDGQEKRWYASTLELQLVSLEFCGACRSVQTLHVRVVPHTPPSLWPPRHSHTTPDKRGPEV 231
SKCLDAF VALNQ CDGQEKRWYASTLELQLVSLEFCGACR V TLHVRV TP SLW PR + T KR +V
Sbjct: 39 SKCLDAFVVALNQTCDGQEKRWYASTLELQLVSLEFCGACRHVPTLHVRVDRRTPRSLWSPRTTPITAHKRSRKV 113 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1520.3679.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1520.3679.1 >prot_E-fasciculatus_F_contig1520.3679.1 ID=prot_E-fasciculatus_F_contig1520.3679.1|Name=mRNA_E-fasciculatus_F_contig1520.3679.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=448bp GNSKCLDAFAVALNQACDGQEKRWYASTLELQLVSLEFCGACRSVQTLHVback to top mRNA from alignment at E-fasciculatus_F_contig1520:13288..14631- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1520.3679.1 ID=mRNA_E-fasciculatus_F_contig1520.3679.1|Name=mRNA_E-fasciculatus_F_contig1520.3679.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1344bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1520:13288..14631- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1520:13288..14631- >mRNA_E-fasciculatus_F_contig1520.3679.1 ID=mRNA_E-fasciculatus_F_contig1520.3679.1|Name=mRNA_E-fasciculatus_F_contig1520.3679.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2688bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1520:13288..14631- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |