mRNA_E-fasciculatus_F_contig1518.3664.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1518.3664.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 244 bits (622), Expect = 5.000e-70 Identity = 141/233 (60.52%), Postives = 168/233 (72.10%), Query Frame = 3
Query: 357 LKNLGLEGYYYDATNAGEQALGLAASHQHLDIIAILTGAGVVDDGTTLMEAAGKGHEAPVKFLLRQRYKERNSSSVEDSYMNAHKIDGLTPLMFSIGSSCCSQAPRMVRLLIEAGADTTMPARSVNSKGEEL-DFTPLGATTSFLRE-IGALGKPATEEHLHRFEAIHHLLLRVGAVHAVSWLWPSDAPFIGHAAESGPEPSLPPLRGMLPILKRRTMGRRGLVASFLRHAVK 1049
++ LG+EG DAT+AG AL AAS+QHLDI+AILT AGVVD G L AAG GHEA VKFLLR R+KE VE +Y+NA ++G TPL+ C SQAPR+VR+L++AGADTT P + +N KG + + TPL T LR+ I A GKPAT+EHL R EAI LLLRV AVHAVSWLWPS APFIG A E+ PEP LP L+ MLPILKRRT R GLVA+ LR++VK
Sbjct: 298 IQELGIEGC--DATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKE-GGCGVEGAYLNARDVNGYTPLVVCT-QGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRATETDPEPPLPALKLMLPILKRRTKRRCGLVATLLRYSVK 526
BLAST of mRNA_E-fasciculatus_F_contig1518.3664.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI) HSP 1 Score: 190 bits (482), Expect = 5.160e-53 Identity = 128/254 (50.39%), Postives = 145/254 (57.09%), Query Frame = 3
Query: 435 HQHLDIIAILTGAGVVDD-GTTLMEAAGKGHEAPVKFLLRQRYKERNSSSVEDSYMNAHKIDGLTPLMFSIGSSCCSQAPRMVRLLIEAGADTTMPARSVN-SKGEELDFTPLGATTSFLREIGALGKPATEEHLHRFEAIHHLLLRVGAVHAVSWLWPSDAPFIGHAAES--GPEPSLPPLRGMLPILKRRTMGRRGLVASFLRHAVKA*PGCGGPRCWCSSSIVCRARDAGRECWSSLVLSGRKPRAADVSK 1184
+QH+DI+AILTGAGV D G L+ AG G EA V+FLLRQR KE S +Y N+ G+TPL SI C S PR+VRLL++AGADTT R N + G E + TPL TTS LRE GKPATEE LHR +AI LLLRV AVHAVSWLWPSDAP I HA E GPEP PPL LPILKRR VA+ LR SS + SGR R AD+SK
Sbjct: 2 NQHMDIMAILTGAGVRDAMGYVLLGTAGLGREASVQFLLRQRRKESEMSV--HAYANSSDGSGMTPLSCSI-EWCSSGNPRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSLLREKVVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVERSCGPEPRRPPLSLTLPILKRRAKTCHVFVATLLR--------------------------------SSPISSGRGSRRADLSK 220
BLAST of mRNA_E-fasciculatus_F_contig1518.3664.1 vs. uniprot
Match: D7FVU0_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU0_ECTSI) HSP 1 Score: 177 bits (448), Expect = 2.320e-46 Identity = 114/200 (57.00%), Postives = 133/200 (66.50%), Query Frame = 3
Query: 357 LKNLGLEGYYYDATNAGEQALGLAASHQHLDIIAILTGAGVVD-DGTTLMEAAGKGHEAPVKFLLRQRYKERNSSSVEDSYMNAHKIDGLTPLMFSIGSSCCSQAPRMVRLLIEAGADTTMPARSVNSKGE-ELDFTPLGATTSFLRE-IGALGKPATEEHLHRFEAIHHLLLRVGAVHAVSWLWPSDAPFIGHAAESGP 947
++ LG++G + NAG+QAL LAAS + LD +AILTGAG VD G+ LM AA EA K LRQR KE VE + +N GLT L+FSI C SQ PR+VRLLI AGADTT R NS+GE + + TPL TTS+L E I G+PATEEHL R EAI LLLR AVHAVSWLWPSDA F+GHAAE P
Sbjct: 189 VQELGIKGC--NPENAGKQALLLAASKRDLDTLAILTGAGAVDTSGSALMCAA----EASFKHFLRQRLKEEKGG-VEYASINDRISSGLTALVFSI-QRCLSQTPRIVRLLINAGADTTSVIRGTNSEGEVQCNGTPLALTTSYLWEKILDNGEPATEEHLQRLEAIRRLLLRAEAVHAVSWLWPSDASFVGHAAEKWP 380
BLAST of mRNA_E-fasciculatus_F_contig1518.3664.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 160 bits (404), Expect = 1.450e-39 Identity = 109/248 (43.95%), Postives = 138/248 (55.65%), Query Frame = 3
Query: 324 ETGTRTWCES*LKNLGLEGYYYDATNAGEQALGLAASHQHLDIIAILTGAGVVDDGTTLMEAAGKGHEAPVKFLLRQRYKERNSSSVEDSYMNAHKIDGLTPLMFSIGSSCCSQAPRMVRLLIEAGADTTMPARSVNSKGEELDF--TPLGATTSFLREIGALGKPATEEHLHRFEAIHHLLLRVGAVHAVSWLWPSDAPFIGHAAESGPEPSLPPLRGMLPILK----RRTMGRRGLVASFLRHAVK 1049
+ G R ++ +G++G ++ GE AL AA LDI+AILT AGVVD G L+ AAG G EAP+KFLL Q +++ +YMN GLT L+ I C PR+V+LL+EAGADTT P N GE+ DF TPLG T L G KP T E ++ E I LLLR AVHAVSWLWPSD P I HA G + P + RRT GR+GL+A+ LR++ K
Sbjct: 195 QNGHREVVNELIRQVGIDGC--GGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRA--AYMNTLNGVGLTSLLDGI-QRC---RPRVVQLLVEAGADTTSPVLICNQPGED-DFHITPLGLTMCLLG--GRSAKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGLLAALLRYSSK 431
BLAST of mRNA_E-fasciculatus_F_contig1518.3664.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 154 bits (389), Expect = 1.270e-37 Identity = 101/237 (42.62%), Postives = 144/237 (60.76%), Query Frame = 3
Query: 357 LKNLGLEGYYYDATNAGEQALGLAASHQHLDIIAILTGAGVVDDGTTLMEAAGKGHEAPVKFLLRQRYKERNSSSVEDSYMNAHKIDGLTPLMFSIGSSCCSQAPRMVRLLIEAGADTTMPARSVNSKG-EELDFTPLGATTSFLRE-IGALGK-PATEEHLHRFEAIHHLLLRVGAVHAVSWLWPSDAPFIGHAAESGPEPSLPPLRGM-LPIL--KRRTMGRRGLVASFLRHAVK 1049
++ +G++G ++ G +AL AA ++L+I+ ILT AGVVD G L+ AAG G E P+KFLL Q + E +Y+N G+TPL++ I PR+VRLL+EAGADTT P N G +++ TPLG T + +R+ + +G+ PA+ E LH+ EAI LLLRV AVHAVSWLWPSD I AA G + + + LP+L +RR GR+ +A+ LR++ K
Sbjct: 206 IRQVGIDGC--GGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMD--EAAYVNTRDRGGVTPLLWGIQH----YRPRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRYSSK 434
BLAST of mRNA_E-fasciculatus_F_contig1518.3664.1 vs. uniprot
Match: D8LDX5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDX5_ECTSI) HSP 1 Score: 138 bits (347), Expect = 1.280e-32 Identity = 92/162 (56.79%), Postives = 105/162 (64.81%), Query Frame = 3
Query: 399 NAGEQA---LGLAASHQHLDIIAILTGAGVVD-DGTTLMEAAGKGHEAPVKFLLRQRYKERNSSSVEDSYMNAHKIDGLTPLMFSIGSSCCSQAPRMVRLLIEAGADTTMPARSVNSKGE-ELDFTPLGATTSFLRE-IGALGKPATEEHLHRFEAIHHLLL 866
NAG QA L AAS QHL I+AILTGAGVVD G +L+ AA EA VKFLLRQRY E ++ SVE SY+NA DG TPL SI CCS A R++RLL +AGAD R NS G+ E TPL TS +RE + A G PATEEHL+ EAI LLL
Sbjct: 116 NAGSQACQALFFAASEQHLVIMAILTGAGVVDWVGLSLLGAAESALEASVKFLLRQRYHE-STRSVEYSYVNASDTDGWTPLAHSI-QRCCSHAARIIRLLFDAGADVASAVRVTNSNGQQEYSGTPLAVVTSCIREKVLANGTPATEEHLYMLEAIGRLLL 275
BLAST of mRNA_E-fasciculatus_F_contig1518.3664.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI) HSP 1 Score: 131 bits (329), Expect = 2.170e-29 Identity = 97/243 (39.92%), Postives = 128/243 (52.67%), Query Frame = 3
Query: 357 LKNLGLEGYYYDATNAGEQALGLAASHQHLDIIAILTGAGVVDDGTTLMEAAGKGHEAPVKFLLRQRYKERNSSSVEDSYMNAHKID-GLTPLMFSIG---SSCCSQAPRMVRLLIEAGADTTMPARSVNSKGE-ELDFTPLGATTSFLREIGALGKPATEEHLHRFEAIHHLLLRVGAVHAVSWLWPSDAPFIGHAA-------ESGPEPSLPPLRGMLPILKRRTMGRRGLVASFLRHAVK 1049
L+ G+ G G AL LAA H+D++ LT AGVVD G L++A GH VKFLL+Q+ + S + +Y++ + G TPL+ +I + CS P++VRLL++AGADTT R G + TPL T LR A K +E L R E I LLLRV AVHA SWLW + P +G A + P LR +LPIL+RR GR + AS R+AVK
Sbjct: 203 LQRFGIRGC--GGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQ---NGTPSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCS--PKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRARGRGFVSASLCRYAVK 438
BLAST of mRNA_E-fasciculatus_F_contig1518.3664.1 vs. uniprot
Match: D7FY91_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY91_ECTSI) HSP 1 Score: 130 bits (328), Expect = 6.530e-29 Identity = 92/240 (38.33%), Postives = 131/240 (54.58%), Query Frame = 3
Query: 357 LKNLGLEGYYYDATNAGEQALGLAASHQHLDIIAILTGAGVVDDGTTLMEAAGKGHEAPVKFLLRQRYKERNSSSVEDSYMNAHKIDGLTPLMFSIGSSCCSQAPRMVRLLIEAGADTTMPARSVNSKGEELDFTPLGATTSFLREIGAL-----GKPATEEHLHRFEAIHHLLLRVGAVHAVSWLWPSDAPFIGHAAESGPEPSL---PPLRGMLPILKRRTMGRRGLVASFLRHAVKA 1052
L+ LG+E + G AL LA + +H+ I+A+L AGVVD G+ L AA +G+EA VKFLLRQ E S+ +Y+N GLTPL+ +I CS R+VRLL++AGADTT R KG+ + A T+ L +G L K T E H +A LLL+V A HA+SW+WP+ + H+ + P P+R LP+ +R T RR L+ + R++ K+
Sbjct: 207 LQRLGIERC--GGESRGVDALCLAVTGRHVGIVAMLAHAGVVDQGSALAAAAAQGYEASVKFLLRQH--EGKHSASRSAYVNKLNRFGLTPLLENITCGHCSA--RIVRLLVDAGADTTAAYRLTGKKGQAM------AATTHLTAMGCLLLEKKAKGDTGEEPHNLQATFRLLLQVEAAHAISWVWPTGS----HSVDRPPRRQRRAEAPVRLTLPMTRRDTGTRRALLGAVSRYSEKS 430
BLAST of mRNA_E-fasciculatus_F_contig1518.3664.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 127 bits (318), Expect = 4.860e-28 Identity = 96/242 (39.67%), Postives = 129/242 (53.31%), Query Frame = 3
Query: 357 LKNLGLEGYYYDATNAGEQALGLAASHQHLDIIAILTGAGVVDDGTTLMEAAGKGHEAPVKFLLRQRYKERNSSSVEDSYMNAHKIDGLTPLMFSI---GSSCCSQAPRMVRLLIEAGADTTMPARSVNSKGEEL-DFTPLGATTSFLREIGALGKPATEEHLHRFEAIHHLLLRVGAVHAVSWLWPSDAPFIGHAAESGPE------PSLPPLRGMLPILKRRTMGRRGLVASFL-RHAVK 1049
++ +G+EG + GE AL +A + + +A+LT AGVVD G L +AG G EA VK+LL+ K + Y+N +G TPL+ SI G S PR+ RLL+EAGADTT R NS G L TPL T L++ G +++ L R E I LLL+V AVHA SWLWPS + G ++ E + P L +LPIL+RR R G+V + L RH K
Sbjct: 189 IQRVGIEGC--GGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHAKHYGPGA----YVNVRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRAR-RPGVVWTALCRHQRK 423
BLAST of mRNA_E-fasciculatus_F_contig1518.3664.1 vs. uniprot
Match: D7FXH6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH6_ECTSI) HSP 1 Score: 126 bits (316), Expect = 1.820e-27 Identity = 91/218 (41.74%), Postives = 118/218 (54.13%), Query Frame = 3
Query: 405 GEQALGLAASHQHLDIIAILTGAGVVDDGTTLMEAAGKGHEAPVKFLLRQRYKERNSSSVEDSYMNAHKIDGLTPLMFSIGSSCCSQAPRMVRLLIEAGADTTMPARSVNSKGEELDFTPLGATTSFLREIGALGKPATEEHLHRFEAIHHLLLRVGAVHAVSWLWPSDAPFIGHAA---ESGPEPSLPPLRGMLPILKRRTMGRRGLVASFLRHAVK 1049
G AL LAA QH+ I+ LT AGVVD GT L A KG EAPVKFLL+Q++ + V NA TPL +I + +PR+VR+L++AGAD T S S + +PL S +R PATEE L+ +AI LLLRV A++A SWLW S+ P I AA E S P + + I RRT RR L+ + LR++ K
Sbjct: 272 GNDALRLAAWVQHMSIMTALTDAGVVDTGTALFNVAAKGLEAPVKFLLQQKWNTPGGAYVNTRSRNAK----FTPLFIAIEGA----SPRVVRMLLDAGADVT----STCSLPGGISRSPLSQCESNIRSKFCQALPATEEQLNGLQAIRRLLLRVEAIYASSWLWCSNIPCIAPAAREVEGACGKSRIPRKARMLISWRRTGARRVLMPASLRYSNK 477 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1518.3664.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1518.3664.1 >prot_E-fasciculatus_F_contig1518.3664.1 ID=prot_E-fasciculatus_F_contig1518.3664.1|Name=mRNA_E-fasciculatus_F_contig1518.3664.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=185bp MEAAGKGHEAPVKFLLRQRYKERNSSSVEDSYMNAHKIDGLTPLMFSIGSback to top mRNA from alignment at E-fasciculatus_F_contig1518:8187..11244+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1518.3664.1 ID=mRNA_E-fasciculatus_F_contig1518.3664.1|Name=mRNA_E-fasciculatus_F_contig1518.3664.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3058bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1518:8187..11244+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1518:8187..11244+ >mRNA_E-fasciculatus_F_contig1518.3664.1 ID=mRNA_E-fasciculatus_F_contig1518.3664.1|Name=mRNA_E-fasciculatus_F_contig1518.3664.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1110bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1518:8187..11244+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |