mRNA_E-fasciculatus_F_contig1518.3664.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1518.3664.1
Unique NamemRNA_E-fasciculatus_F_contig1518.3664.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1518.3664.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 244 bits (622), Expect = 5.000e-70
Identity = 141/233 (60.52%), Postives = 168/233 (72.10%), Query Frame = 3
Query:  357 LKNLGLEGYYYDATNAGEQALGLAASHQHLDIIAILTGAGVVDDGTTLMEAAGKGHEAPVKFLLRQRYKERNSSSVEDSYMNAHKIDGLTPLMFSIGSSCCSQAPRMVRLLIEAGADTTMPARSVNSKGEEL-DFTPLGATTSFLRE-IGALGKPATEEHLHRFEAIHHLLLRVGAVHAVSWLWPSDAPFIGHAAESGPEPSLPPLRGMLPILKRRTMGRRGLVASFLRHAVK 1049
            ++ LG+EG   DAT+AG  AL  AAS+QHLDI+AILT AGVVD G  L  AAG GHEA VKFLLR R+KE     VE +Y+NA  ++G TPL+      C SQAPR+VR+L++AGADTT P + +N KG  + + TPL  T   LR+ I A GKPAT+EHL R EAI  LLLRV AVHAVSWLWPS APFIG A E+ PEP LP L+ MLPILKRRT  R GLVA+ LR++VK
Sbjct:  298 IQELGIEGC--DATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKE-GGCGVEGAYLNARDVNGYTPLVVCT-QGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRATETDPEPPLPALKLMLPILKRRTKRRCGLVATLLRYSVK 526          
BLAST of mRNA_E-fasciculatus_F_contig1518.3664.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI)

HSP 1 Score: 190 bits (482), Expect = 5.160e-53
Identity = 128/254 (50.39%), Postives = 145/254 (57.09%), Query Frame = 3
Query:  435 HQHLDIIAILTGAGVVDD-GTTLMEAAGKGHEAPVKFLLRQRYKERNSSSVEDSYMNAHKIDGLTPLMFSIGSSCCSQAPRMVRLLIEAGADTTMPARSVN-SKGEELDFTPLGATTSFLREIGALGKPATEEHLHRFEAIHHLLLRVGAVHAVSWLWPSDAPFIGHAAES--GPEPSLPPLRGMLPILKRRTMGRRGLVASFLRHAVKA*PGCGGPRCWCSSSIVCRARDAGRECWSSLVLSGRKPRAADVSK 1184
            +QH+DI+AILTGAGV D  G  L+  AG G EA V+FLLRQR KE   S    +Y N+    G+TPL  SI   C S  PR+VRLL++AGADTT   R  N + G E + TPL  TTS LRE    GKPATEE LHR +AI  LLLRV AVHAVSWLWPSDAP I HA E   GPEP  PPL   LPILKRR       VA+ LR                                SS + SGR  R AD+SK
Sbjct:    2 NQHMDIMAILTGAGVRDAMGYVLLGTAGLGREASVQFLLRQRRKESEMSV--HAYANSSDGSGMTPLSCSI-EWCSSGNPRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSLLREKVVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVERSCGPEPRRPPLSLTLPILKRRAKTCHVFVATLLR--------------------------------SSPISSGRGSRRADLSK 220          
BLAST of mRNA_E-fasciculatus_F_contig1518.3664.1 vs. uniprot
Match: D7FVU0_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU0_ECTSI)

HSP 1 Score: 177 bits (448), Expect = 2.320e-46
Identity = 114/200 (57.00%), Postives = 133/200 (66.50%), Query Frame = 3
Query:  357 LKNLGLEGYYYDATNAGEQALGLAASHQHLDIIAILTGAGVVD-DGTTLMEAAGKGHEAPVKFLLRQRYKERNSSSVEDSYMNAHKIDGLTPLMFSIGSSCCSQAPRMVRLLIEAGADTTMPARSVNSKGE-ELDFTPLGATTSFLRE-IGALGKPATEEHLHRFEAIHHLLLRVGAVHAVSWLWPSDAPFIGHAAESGP 947
            ++ LG++G   +  NAG+QAL LAAS + LD +AILTGAG VD  G+ LM AA    EA  K  LRQR KE     VE + +N     GLT L+FSI   C SQ PR+VRLLI AGADTT   R  NS+GE + + TPL  TTS+L E I   G+PATEEHL R EAI  LLLR  AVHAVSWLWPSDA F+GHAAE  P
Sbjct:  189 VQELGIKGC--NPENAGKQALLLAASKRDLDTLAILTGAGAVDTSGSALMCAA----EASFKHFLRQRLKEEKGG-VEYASINDRISSGLTALVFSI-QRCLSQTPRIVRLLINAGADTTSVIRGTNSEGEVQCNGTPLALTTSYLWEKILDNGEPATEEHLQRLEAIRRLLLRAEAVHAVSWLWPSDASFVGHAAEKWP 380          
BLAST of mRNA_E-fasciculatus_F_contig1518.3664.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 1.450e-39
Identity = 109/248 (43.95%), Postives = 138/248 (55.65%), Query Frame = 3
Query:  324 ETGTRTWCES*LKNLGLEGYYYDATNAGEQALGLAASHQHLDIIAILTGAGVVDDGTTLMEAAGKGHEAPVKFLLRQRYKERNSSSVEDSYMNAHKIDGLTPLMFSIGSSCCSQAPRMVRLLIEAGADTTMPARSVNSKGEELDF--TPLGATTSFLREIGALGKPATEEHLHRFEAIHHLLLRVGAVHAVSWLWPSDAPFIGHAAESGPEPSLPPLRGMLPILK----RRTMGRRGLVASFLRHAVK 1049
            + G R      ++ +G++G     ++ GE AL  AA    LDI+AILT AGVVD G  L+ AAG G EAP+KFLL Q    +++     +YMN     GLT L+  I   C    PR+V+LL+EAGADTT P    N  GE+ DF  TPLG T   L   G   KP T E  ++ E I  LLLR  AVHAVSWLWPSD P I HA   G   +        P +     RRT GR+GL+A+ LR++ K
Sbjct:  195 QNGHREVVNELIRQVGIDGC--GGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRA--AYMNTLNGVGLTSLLDGI-QRC---RPRVVQLLVEAGADTTSPVLICNQPGED-DFHITPLGLTMCLLG--GRSAKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGLLAALLRYSSK 431          
BLAST of mRNA_E-fasciculatus_F_contig1518.3664.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 1.270e-37
Identity = 101/237 (42.62%), Postives = 144/237 (60.76%), Query Frame = 3
Query:  357 LKNLGLEGYYYDATNAGEQALGLAASHQHLDIIAILTGAGVVDDGTTLMEAAGKGHEAPVKFLLRQRYKERNSSSVEDSYMNAHKIDGLTPLMFSIGSSCCSQAPRMVRLLIEAGADTTMPARSVNSKG-EELDFTPLGATTSFLRE-IGALGK-PATEEHLHRFEAIHHLLLRVGAVHAVSWLWPSDAPFIGHAAESGPEPSLPPLRGM-LPIL--KRRTMGRRGLVASFLRHAVK 1049
            ++ +G++G     ++ G +AL  AA  ++L+I+ ILT AGVVD G  L+ AAG G E P+KFLL Q    +     E +Y+N     G+TPL++ I        PR+VRLL+EAGADTT P    N  G +++  TPLG T + +R+ +  +G+ PA+ E LH+ EAI  LLLRV AVHAVSWLWPSD   I  AA  G + +      + LP+L  +RR  GR+  +A+ LR++ K
Sbjct:  206 IRQVGIDGC--GGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMD--EAAYVNTRDRGGVTPLLWGIQH----YRPRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRYSSK 434          
BLAST of mRNA_E-fasciculatus_F_contig1518.3664.1 vs. uniprot
Match: D8LDX5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDX5_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 1.280e-32
Identity = 92/162 (56.79%), Postives = 105/162 (64.81%), Query Frame = 3
Query:  399 NAGEQA---LGLAASHQHLDIIAILTGAGVVD-DGTTLMEAAGKGHEAPVKFLLRQRYKERNSSSVEDSYMNAHKIDGLTPLMFSIGSSCCSQAPRMVRLLIEAGADTTMPARSVNSKGE-ELDFTPLGATTSFLRE-IGALGKPATEEHLHRFEAIHHLLL 866
            NAG QA   L  AAS QHL I+AILTGAGVVD  G +L+ AA    EA VKFLLRQRY E ++ SVE SY+NA   DG TPL  SI   CCS A R++RLL +AGAD     R  NS G+ E   TPL   TS +RE + A G PATEEHL+  EAI  LLL
Sbjct:  116 NAGSQACQALFFAASEQHLVIMAILTGAGVVDWVGLSLLGAAESALEASVKFLLRQRYHE-STRSVEYSYVNASDTDGWTPLAHSI-QRCCSHAARIIRLLFDAGADVASAVRVTNSNGQQEYSGTPLAVVTSCIREKVLANGTPATEEHLYMLEAIGRLLL 275          
BLAST of mRNA_E-fasciculatus_F_contig1518.3664.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 2.170e-29
Identity = 97/243 (39.92%), Postives = 128/243 (52.67%), Query Frame = 3
Query:  357 LKNLGLEGYYYDATNAGEQALGLAASHQHLDIIAILTGAGVVDDGTTLMEAAGKGHEAPVKFLLRQRYKERNSSSVEDSYMNAHKID-GLTPLMFSIG---SSCCSQAPRMVRLLIEAGADTTMPARSVNSKGE-ELDFTPLGATTSFLREIGALGKPATEEHLHRFEAIHHLLLRVGAVHAVSWLWPSDAPFIGHAA-------ESGPEPSLPPLRGMLPILKRRTMGRRGLVASFLRHAVK 1049
            L+  G+ G        G  AL LAA   H+D++  LT AGVVD G  L++A   GH   VKFLL+Q+     + S + +Y++  +   G TPL+ +I    +  CS  P++VRLL++AGADTT   R     G   +  TPL   T  LR   A  K   +E L R E I  LLLRV AVHA SWLW +  P +G  A             + P LR +LPIL+RR  GR  + AS  R+AVK
Sbjct:  203 LQRFGIRGC--GGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQ---NGTPSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCS--PKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRARGRGFVSASLCRYAVK 438          
BLAST of mRNA_E-fasciculatus_F_contig1518.3664.1 vs. uniprot
Match: D7FY91_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY91_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 6.530e-29
Identity = 92/240 (38.33%), Postives = 131/240 (54.58%), Query Frame = 3
Query:  357 LKNLGLEGYYYDATNAGEQALGLAASHQHLDIIAILTGAGVVDDGTTLMEAAGKGHEAPVKFLLRQRYKERNSSSVEDSYMNAHKIDGLTPLMFSIGSSCCSQAPRMVRLLIEAGADTTMPARSVNSKGEELDFTPLGATTSFLREIGAL-----GKPATEEHLHRFEAIHHLLLRVGAVHAVSWLWPSDAPFIGHAAESGPEPSL---PPLRGMLPILKRRTMGRRGLVASFLRHAVKA 1052
            L+ LG+E       + G  AL LA + +H+ I+A+L  AGVVD G+ L  AA +G+EA VKFLLRQ   E   S+   +Y+N     GLTPL+ +I    CS   R+VRLL++AGADTT   R    KG+ +      A T+ L  +G L      K  T E  H  +A   LLL+V A HA+SW+WP+ +    H+ +  P        P+R  LP+ +R T  RR L+ +  R++ K+
Sbjct:  207 LQRLGIERC--GGESRGVDALCLAVTGRHVGIVAMLAHAGVVDQGSALAAAAAQGYEASVKFLLRQH--EGKHSASRSAYVNKLNRFGLTPLLENITCGHCSA--RIVRLLVDAGADTTAAYRLTGKKGQAM------AATTHLTAMGCLLLEKKAKGDTGEEPHNLQATFRLLLQVEAAHAISWVWPTGS----HSVDRPPRRQRRAEAPVRLTLPMTRRDTGTRRALLGAVSRYSEKS 430          
BLAST of mRNA_E-fasciculatus_F_contig1518.3664.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 4.860e-28
Identity = 96/242 (39.67%), Postives = 129/242 (53.31%), Query Frame = 3
Query:  357 LKNLGLEGYYYDATNAGEQALGLAASHQHLDIIAILTGAGVVDDGTTLMEAAGKGHEAPVKFLLRQRYKERNSSSVEDSYMNAHKIDGLTPLMFSI---GSSCCSQAPRMVRLLIEAGADTTMPARSVNSKGEEL-DFTPLGATTSFLREIGALGKPATEEHLHRFEAIHHLLLRVGAVHAVSWLWPSDAPFIGHAAESGPE------PSLPPLRGMLPILKRRTMGRRGLVASFL-RHAVK 1049
            ++ +G+EG      + GE AL +A   + +  +A+LT AGVVD G  L  +AG G EA VK+LL+   K     +    Y+N    +G TPL+ SI   G    S  PR+ RLL+EAGADTT   R  NS G  L   TPL  T   L++    G   +++ L R E I  LLL+V AVHA SWLWPS +   G   ++  E       + P L  +LPIL+RR   R G+V + L RH  K
Sbjct:  189 IQRVGIEGC--GGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHAKHYGPGA----YVNVRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRAR-RPGVVWTALCRHQRK 423          
BLAST of mRNA_E-fasciculatus_F_contig1518.3664.1 vs. uniprot
Match: D7FXH6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH6_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 1.820e-27
Identity = 91/218 (41.74%), Postives = 118/218 (54.13%), Query Frame = 3
Query:  405 GEQALGLAASHQHLDIIAILTGAGVVDDGTTLMEAAGKGHEAPVKFLLRQRYKERNSSSVEDSYMNAHKIDGLTPLMFSIGSSCCSQAPRMVRLLIEAGADTTMPARSVNSKGEELDFTPLGATTSFLREIGALGKPATEEHLHRFEAIHHLLLRVGAVHAVSWLWPSDAPFIGHAA---ESGPEPSLPPLRGMLPILKRRTMGRRGLVASFLRHAVK 1049
            G  AL LAA  QH+ I+  LT AGVVD GT L   A KG EAPVKFLL+Q++     + V     NA      TPL  +I  +    +PR+VR+L++AGAD T    S  S    +  +PL    S +R       PATEE L+  +AI  LLLRV A++A SWLW S+ P I  AA   E     S  P +  + I  RRT  RR L+ + LR++ K
Sbjct:  272 GNDALRLAAWVQHMSIMTALTDAGVVDTGTALFNVAAKGLEAPVKFLLQQKWNTPGGAYVNTRSRNAK----FTPLFIAIEGA----SPRVVRMLLDAGADVT----STCSLPGGISRSPLSQCESNIRSKFCQALPATEEQLNGLQAIRRLLLRVEAIYASSWLWCSNIPCIAPAAREVEGACGKSRIPRKARMLISWRRTGARRVLMPASLRYSNK 477          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1518.3664.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT11_ECTSI5.000e-7060.52EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LSC5_ECTSI5.160e-5350.39EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FVU0_ECTSI2.320e-4657.00EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5KQV0_9PHAE1.450e-3943.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJA9_9PHAE1.270e-3742.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDX5_ECTSI1.280e-3256.79EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FVK3_ECTSI2.170e-2939.92EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FY91_ECTSI6.530e-2938.33EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY... [more]
D8LJF9_ECTSI4.860e-2839.67EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FXH6_ECTSI1.820e-2741.74Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1518contigE-fasciculatus_F_contig1518:8187..11244 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score195.3
Seed ortholog evalue2.5e-47
Seed eggNOG ortholog2880.D7FT11
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size1726
Cds size555
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1518.3664.1prot_E-fasciculatus_F_contig1518.3664.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1518 8687..10573 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927997.328282-UTR-E-fasciculatus_F_contig1518:8186..86861622927997.328282-UTR-E-fasciculatus_F_contig1518:8186..8686Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1518 8187..8686 +
1695995782.8530772-UTR-E-fasciculatus_F_contig1518:8186..86861695995782.8530772-UTR-E-fasciculatus_F_contig1518:8186..8686Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1518 8187..8686 +
1622927997.3680604-UTR-E-fasciculatus_F_contig1518:10573..112441622927997.3680604-UTR-E-fasciculatus_F_contig1518:10573..11244Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1518 10574..11244 +
1695995782.8857822-UTR-E-fasciculatus_F_contig1518:10573..112441695995782.8857822-UTR-E-fasciculatus_F_contig1518:10573..11244Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1518 10574..11244 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927997.3393302-CDS-E-fasciculatus_F_contig1518:8686..92221622927997.3393302-CDS-E-fasciculatus_F_contig1518:8686..9222Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1518 8687..9222 +
1695995782.86574-CDS-E-fasciculatus_F_contig1518:8686..92221695995782.86574-CDS-E-fasciculatus_F_contig1518:8686..9222Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1518 8687..9222 +
1622927997.3519351-CDS-E-fasciculatus_F_contig1518:10554..105731622927997.3519351-CDS-E-fasciculatus_F_contig1518:10554..10573Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1518 10555..10573 +
1695995782.875574-CDS-E-fasciculatus_F_contig1518:10554..105731695995782.875574-CDS-E-fasciculatus_F_contig1518:10554..10573Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1518 10555..10573 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1518.3664.1

>prot_E-fasciculatus_F_contig1518.3664.1 ID=prot_E-fasciculatus_F_contig1518.3664.1|Name=mRNA_E-fasciculatus_F_contig1518.3664.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=185bp
MEAAGKGHEAPVKFLLRQRYKERNSSSVEDSYMNAHKIDGLTPLMFSIGS
SCCSQAPRMVRLLIEAGADTTMPARSVNSKGEELDFTPLGATTSFLREIG
ALGKPATEEHLHRFEAIHHLLLRVGAVHAVSWLWPSDAPFIGHAAESGPE
PSLPPLRGMLPILKRRTMGRRGLVASFLRHAVKA*
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mRNA from alignment at E-fasciculatus_F_contig1518:8187..11244+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1518.3664.1 ID=mRNA_E-fasciculatus_F_contig1518.3664.1|Name=mRNA_E-fasciculatus_F_contig1518.3664.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3058bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1518:8187..11244+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CATACCGCAAACATCGGCAAAGTCAAGAGGGACACGCAACCATCGGGAGT TGTTGGCCGAGGCTGGTGCCGACCTCGAAGCCGTGAATAGTGAGGGCTGC ACACCATTTCACCTGGCGACACGCCATGGAAGCTCTAAGGTGGTGAGAAC GTTTTGATCGAGGCAGGCGCGAATCCCGAAGGAGCAACACCTACCTCTGC TCATCGCAGCTGAAGCAGGACGTTTGGACGTGATGAGGGAGCTGCTTCGT GGGAAGGCGGATCTGTTGTTGAGTCAAGTAAATCCAGATGGGTACACCTC GGTTCCACTGGACATAGCTGCCTGAAACGGGCACTCGGACGTGGTGCGAG AGCTAGTTGAAGAATTTGGGGCTTGAAGGTTATTATTATGATGCTACAAA CGCCGGCGAACAAGCTCTCGGCCTTGCCGCGTCGCATCAGCACTTGGACA TCATCGCCATCCTGACCGGAGCAGGCGTGGTGGATGATGGCACAACTCTT ATGGAAGCCGCCGGAAAGGGCCATGAGGCACCCGTCAAGTTTCTCTTGCG GCAGCGGTACAAGGAGAGGAACAGCAGCAGCGTTGAAGATTCGTACATGA ACGCCCACAAGATCGACGGCCTCACACCCCTGATGTTCAGTATTGGGTCA TCATGCTGCTCGCAAGCCCCCAGGATGGTGCGGTTGCTGATTGAAGCTGG AGCAGATACGACAATGCCTGCGCGAAGCGTAAACTCGAAGGGAGAGGAGC TGGACTTCACCCCTCTGGGTGCGACAACCTCATTCCTCCGCGAGATTGGT GCACTCGGCAAACCCGCCACGGAGGAGCACCTGCACCGGTTTGAGGCCAT CCATCACTTGCTGTTGCGAGTGGGGGCAGTCCATGCGGTGTCATGGCTGT GGCCAAGCGATGCTCCCTTCATCGGCCATGCTGCAGAGAGTGGTCCCGAG CCGTCTTTGCCACCACTGAGGGGGATGTTGCCGATCCTGAAGCGACGGAC AATGGGGCGTCGCGGGCTTGTAGCATCGTTCTTGAGGTGGGTTTTTTGGT GGAACGTGACAAACTCACGCCCGACGTGGTCTGATCTGTAGTTTGAGCCC ATCCCCCGTTGACCGGACGCGTTTTCTGCTGAGGGCCTGCGGCCGATGAG GCGAATCCAAGCACCTGTTCCTGTTGCCGAGGTTTCGTTAGACTGTGTGG CCAAAGTTGTCCTTTTCTGTACACCGTGAGGTTCTCCGCACAAGACAACC TCGTGGCCCTTCGCAGGTTGCTTTTTATGGCAATGTGTCCGTAGGTTCAT TGATAAAACCACAGGTATTTTGTACGTGTTTTTCAGCTATGTAGTTCGAC TAGTCAGTAGGCCCTACCCGGAGATCTCAGAACACGGCCGAACCTCGTGA ATCATCAACAGACATCGCCTGCAGACGTTCGTGGAAGCAAGTACCGATCC AAGACTTGAAACCTTAGACGCTGTCGTCCGTGTGCAGTGAAGTCTTTCTA CCTCACGACACCACTAGGAATTCAACCTTGTTGACCCGGTATTACTGTAT TACTGTAGCGGCGTTCTGCTCTTCCTGGCAGCTATTAATAATATAATAAT AGGTGTCTGAAGCTTGACCCAATACTGTAGCATCTCCCTTGCCGTGCCTC TCTCAATCCTGAATATGGTGTGCTCTCTTAGCGATGCAAGACGAGATCTT CGGTGATCCTTTCGGTATGCATACAAAAAACGAAGCATGCGACACTTTCG CCGGTTTTTATTCCATACTTTGGGGTTCGTTTAGTTTACATGTAAGGATT GCAAATCACGAACAACCCTTACAACGCCACCCTCCCGCGCTCTGGTTGGT GGGTATCATAGTTCACCCCGTGGTTTCGTTGAGGTTCAAAAGTGAACGAT CTTGTCTCGGCTATAACAGTGTGGTTTGGATGGGTGGGGCTTCAGTTCCC AACTACCAAGTTCTCAACAAGCGTGACTGCCTGCGCGCCGTCCTCGGCCT GTTGCTTGTTCTTCTTGGTGCCTCGGAACTGACTACATTATGATGTGGTA CTGAACCTGGGGACCGTTTTGTAAACTAGGCAAGTTTCTCTTTCGCACCG CCTGCCTGCTGATTGCCGTTGCTACCACCTCTGTCGCGTTTTTTCTTTGG TTCGACCACATTTTGGTTCACGCCACCTGCTTTGGCTCTGCGCAATGCTG GGAGATGCATCAACTGTCCCTTGGCCGGCCGGCCTTGACCCGCCGGGTGT CGTTGTTTGCCATTGCTGAGCCGAAACTGCTGTCGCGCTGTACTCGCTCC CGCGACAACCGTCCAACATCCGGGGTATTCTGTTTCACGCTTTGTCCAAA TCACATGATCATTTGCAGGCATGCGGTGAAGGCTTGACCGGGATGTGGGG GCCCAAGATGTTGGTGTTCGTCATCCATTGTCTGCCGCGCGAGGGATGCT GGCCGTGAATGCTGGAGTTCTCTGGTACTCAGCGGGCGCAAGCCTCGCGC AGCTGATGTGTCCAAGGGAAGTTAAGAGGGTGTTCATTGCATATAGCGTG TTTCGAATGGTGCGTACCTTCTGTAGGAAGAGTTGTTTCGGTCTCATGTT GGAGAAGGGGCAAAGGTGACTAACGGGGGATCTCTCATCACTTCTGTGTC CTGCTCTTCGACCTGTGGAGCGTGCACGCCTCTGATGCACCAAAGCCGAT GCCCATCGAATGTAGTACCGTATGCGTTAGATCAGACCAGACGCCCACAT GCTAATGCCGGCGGCCAGGAGGAAGATTTCTAATTGTTATTTGCTGTATA ATTGCACTTGTACCGTCACCTTCCAGGTGCCCGGTAGGTACGTAGGCGCC CCGAACAAGGTTAAGGTTCCATTGGGGGAACCTTGTCTGTCGCGATCGGT CCCCTTGTTCAACGCCGAGTTAAAACTTGCCCGAAGAAGTAACTCCTGCA AAGCAATGGACTCGACAAATAAATGGCGAATTGTGAAGGATGATTCACCG CACGGCATTTATTATGTGCTGTTCAACAACAACACCTGAGCGAAAGCACA GATGGGAT
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1518:8187..11244+

>mRNA_E-fasciculatus_F_contig1518.3664.1 ID=mRNA_E-fasciculatus_F_contig1518.3664.1|Name=mRNA_E-fasciculatus_F_contig1518.3664.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1110bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1518:8187..11244+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGAAGCCGCCGGAAAGGGCCATGAGGCACCCGTCAAGTTTCTCTTGCG
GCAGCGGTACAAGGAGAGGAACAGCAGCAGCGTTGAAGATTCGTACATGA
ACGCCCACAAGATCGACGGCCTCACACCCCTGATGTTCAGTATTGGGTCA
TCATGCTGCTCGCAAGCCCCCAGGATGGTGCGGTTGCTGATTGAAGCTGG
AGCAGATACGACAATGCCTGCGCGAAGCGTAAACTCGAAGGGAGAGGAGC
TGGACTTCACCCCTCTGGGTGCGACAACCTCATTCCTCCGCGAGATTGGT
GCACTCGGCAAACCCGCCACGGAGGAGCACCTGCACCGGTTTGAGGCCAT
CCATCACTTGCTGTTGCGAGTGGGGGCAGTCCATGCGGTGTCATGGCTGT
GGCCAAGCGATGCTCCCTTCATCGGCCATGCTGCAGAGAGTGGTCCCGAG
CCGTCTTTGCCACCACTGAGGGGGATGTTGCCGATCCTGAAGCGACGGAC
AATGGGGCGTCGCGGGCTTGTAGCATCGTTCTTGAGATGGAAGCCGCCGG
AAAGGGCCATGAGGCACCCGTCAAGTTTCTCTTGCGGCAGCGGTACAAGG
AGAGGAACAGCAGCAGCGTTGAAGATTCGTACATGAACGCCCACAAGATC
GACGGCCTCACACCCCTGATGTTCAGTATTGGGTCATCATGCTGCTCGCA
AGCCCCCAGGATGGTGCGGTTGCTGATTGAAGCTGGAGCAGATACGACAA
TGCCTGCGCGAAGCGTAAACTCGAAGGGAGAGGAGCTGGACTTCACCCCT
CTGGGTGCGACAACCTCATTCCTCCGCGAGATTGGTGCACTCGGCAAACC
CGCCACGGAGGAGCACCTGCACCGGTTTGAGGCCATCCATCACTTGCTGT
TGCGAGTGGGGGCAGTCCATGCGGTGTCATGGCTGTGGCCAAGCGATGCT
CCCTTCATCGGCCATGCTGCAGAGAGTGGTCCCGAGCCGTCTTTGCCACC
ACTGAGGGGGATGTTGCCGATCCTGAAGCGACGGACAATGGGGCGTCGCG
GGCTTGTAGCATCGTTCTTGAGGCATGCGGTGAAGGCTTGAGCATGCGGT
GAAGGCTTGA
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