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Homology
BLAST of mRNA_E-fasciculatus_F_contig1515.3650.1 vs. uniprot
Match: D7FY80_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY80_ECTSI) HSP 1 Score: 385 bits (989), Expect = 5.420e-127 Identity = 238/317 (75.08%), Postives = 244/317 (76.97%), Query Frame = 3
Query: 330 GGMAVANAKTAPSKPRCRKVGARCRFEGCTGRPWFAQPGSRVPRACKAHKEEGEVNVYAPACEAXXXXXXXHYGVDGGRARFCXKXXLXXXXXXXXXXXXXXXXRRQPSWARERGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKSGAAATTMPHPSQENAHGPTQSSPAPAETAAGAAAGAATAAVHPGPARYCAAHAPTGAANVTASRCRHPGGCSVQPYFGREGGGQQPEFCALHRKPGMTDIRNPRCAAVGCAAQPRCGREGDPRPTFCLRHAEPDMVNFRSAGYRDRDREQAPPPKRRKAAMSSPAPSR 1280
G MAVANAKTAPSKPRCRKVGARCRFEGCTGRPWFAQPGSRVPRACKAHKEEGEVNVYAPACEA HYG DGGRARF XK L RRQPSWARER XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKSGA ATT PS++N ET AG AA ATAA HPGPARYCAAHAP GA NVTASRCRHPGGCSVQPYFGREGGGQQP+FCALHRKPGMTD+RNPRC AVGC AQPRCGREGDPR MVNFRSAGYRDR + A PKRRK A+SS APSR
Sbjct: 2 GRMAVANAKTAPSKPRCRKVGARCRFEGCTGRPWFAQPGSRVPRACKAHKEEGEVNVYAPACEADACTTRPHYGADGGRARFXXKHKLDGMVDVLNKRCAKKGCRRQPSWARERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKSGAVATTKSQPSEDNT-----------ETTAGGAA--ATAAAHPGPARYCAAHAPAGATNVTASRCRHPGGCSVQPYFGREGGGQQPKFCALHRKPGMTDVRNPRCTAVGCTAQPRCGREGDPRXXXXXXXXXXXMVNFRSAGYRDRGK--ATTPKRRKLAISSSAPSR 303
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 63.9 |
| Seed ortholog evalue | 1.7e-07 |
| Seed eggNOG ortholog | 2880.D8LFX6 |
| EggNOG OGs | 29ZCP@1,2RXW0@2759 |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | EsV-1-7 domain protein |
| Ec32 ortholog | Ec-24_003480.1 |
| Exons | 6 |
| Model size | 1878 |
| Cds size | 1074 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1515.3650.1 >prot_E-fasciculatus_F_contig1515.3650.1 ID=prot_E-fasciculatus_F_contig1515.3650.1|Name=mRNA_E-fasciculatus_F_contig1515.3650.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=358bp
MAMHRKEMTTWTSPLQPQVQQRQQPEPPPFPVKRGFLKGTGGMAVANAKT
APSKPRCRKVGARCRFEGCTGRPWFAQPGSRVPRACKAHKEEGEVNVYAP
ACEADGCTTRPHYGVDGGRARFCCKHKLDGMVDVLNKRCATKGCRRQPSW
ARERGARALFCKEHKEDGMVDTKHKTCLHPGCTRFPSKSGAAATTMPHPS
QENAHGPTQSSPAPAETAAGAAAGAATAAVHPGPARYCAAHAPTGAANVT
ASRCRHPGGCSVQPYFGREGGGQQPEFCALHRKPGMTDIRNPRCAAVGCA
AQPRCGREGDPRPTFCLRHAEPDMVNFRSAGYRDRDREQAPPPKRRKAAM
SSPAPSR* back to topmRNA from alignment at E-fasciculatus_F_contig1515:8361..12347+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-fasciculatus_F_contig1515.3650.1 ID=mRNA_E-fasciculatus_F_contig1515.3650.1|Name=mRNA_E-fasciculatus_F_contig1515.3650.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3987bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1515:8361..12347+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTTTTGGAGGGTGCTCTGGGTGTGGCCTGGGTGCTGGCATCATCTGGCAT
CGCCGAAGGCAGCCATCCATACATCCATACATCCATACCCTATACTTCAA
GGCTACAGGATCCATCCTTAGTGCCTACTGCTTCTGCTGCTGTGCTTCAA
CTCCCACAGAGAGAGAGAGATGCGAAGAAGAGGCTGATTTCTTGCGGAGG
ATAGATATCATGGCTATGCATAGGAAAGAGATGACAACCTGGACATCACC
TCTGCAACCGCAGGTGCAGCAACGGCAGCAGCCAGAGCCACCACCTTTCC
CCGTTAAAAGAGGTTTCCTCAAGGGCACGGGGGGAATGGCAGTCGCAAAC
GCGAAGACGGCGCCCTCCAAACCGAGGTATGCTTGTGATATGAAGAGGAG
AGATCTCGCTTGGCACTCGCTCGAGGAAAGGTTTAGACTATGCAGGTTTC
CTCGCTTTCGGCCGGGTCACCTCTGCCGTTGCCGATCAAACATACCAGAG
AAGATCTACAGCAGTACCACGAGGGTTATATCCCTTAAAAATAAACATCT
CGTGTGATGGTGCTTATGTACGTGCATCGTGACATTCATCTGTTTATTAT
GCTGAGCATCGTGCCCCACAGGCATACTCGTAGCATTCCGCTTCGAAATG
GCTTGCGTGAAGAGGTGTCCTGGAATACCCCTGGTGCGATTGCATAGCTC
ACGGACCTATCTATCTTGCACGACCTCCTGTACCCCAACTCGTTCTTTTC
GAACCTCTAATCAAACAGATGTCGTAAGGTCGGTGCCCGGTGCCGGTTCG
AGGGCTGCACTGGGCGTCCTTGGTTCGCGCAGCCGGGCTCCCGAGTCCCA
AGGGCATGCAAGGCCCACAAGGAAGAGGGGGAGGTCAACGTTTACGCGCC
AGCCTGCGAAGCGGATGGGTGCACGACGAGGCCGCACTACGGCGTGGACG
GCGGGCGGGCGAGGTTCTGTTGCAAGCACAAGGTGCGTTGTTGTGTGTAG
CACAGAAACAAACGACTCTCCGCAGTGTTGTGAAGGCGTAGTGTCAACTC
TGTAACCCTGAGGAAGGCAGGCTGGGCGTCTGGCTGAGGAATTGGCAGGT
CGTTCGCGCGTGCTCCACCTACGCTAAACCTCGCCAGAAACGCCAGCAGC
AACACACCAGGAAAAGTACGTTTGTTAGCCTACGATGGTTCATATTGCCG
GCTGGGTTGGTCGAGAAGGACAAGATGCGTCATACTTAATGCCACCATTG
CTGATACTTGCTCCCCCCTTTCGTGGACCCGCTGTTATGACCTCCTCCTT
CCCTGGCGAAAACCTTTCGACGGGCGCTGCAGCTTGACGGGATGGTGGAT
GTGCTCAACAAACGCTGTGCGACGAAAGGGTGCCGAAGGCAGCCGAGCTG
GGCAAGAGAAAGAGGAGCTCGAGCTCTTTTCTGCAAGGTACTTGCTCCGC
CTCCTACTCTTGACGGTTACTGTTGTCGACGCTGCGGTTCACGTATTGGC
GGCACACACCACCCTCGGAGTATTTTTGTGTTGCTTTTGCTGCTTGTATT
GGGCAGAGAGATCGGATCAGTAGCGATTACTGCGAAGATAACAACAACAA
CAATTTGCTTGCTTGGCCTGGTGAAGGCTCTGCTGTCCCCACCCACCTTC
CCCGCTACACCACCGCTACGTTTTCGTCGGTACACCCACGCCAACCCAAT
CCGTCCTTCACCCCCCGCAGGAGCACAAAGAGGACGGCATGGTGGACACG
AAGCACAAGACGTGCTTACACCCGGGCTGCACGCGGTTTCCCTCCAAAAG
CGGTGCCGCCGCAACGACCATGCCGCATCCCTCCCAGGAGAACGCACACG
GACCCACACAATCGTCACCAGCGCCCGCAGAAACAGCGGCGGGGGCGGCG
GCGGGAGCAGCAACAGCGGCGGTCCACCCGGGACCAGCGAGGTACTGCGC
CGCGCACGCTCCGACGGGAGCCGCAAACGTGACCGCTAGCAGGTGCCGGC
ACCCCGGCGGCTGCTCCGTGCAGCCGTACTTCGGGCGGGAGGGAGGGGGG
CAGCAGCCAGAGTTCTGCGCTCTGCACCGGAAGCCGGGGATGACGGACAT
CCGGAACCCCAGGTTTGTGCGGAATGTTTCGGCCTGTGCGCTTGTTGGAT
GTACGTGTTCGTGAGTTTTTTGGGGGCGACGCATCGATTCGTGTAGTTTT
TCCCCTTCTGTGCGGCGTTGGTGTAGCAGGCGGAGGGAACGCGCGCTCCT
TCCCTCTCTGCTTACCCGTCGGGAACCGCGCCGCACGTCACCGGCAATGG
CGCGACCTACTGTACTCACATATTTTTTTTTTCTCCAAAACTCCCAGAGT
ATCTCTATTCGTGTTCCCTTTGCTGCGCTTGTTTGCCCCTCCCATCCCCC
CTGCCGAACCCCGTCAAACCGCCACCGAATGCATCCGGAGTTCAGTCTCC
ACTCAGACACATTTTTAACTGGTTAAACTTGTTTGCATGGTGGCTCTGAC
AATAGTTTGAGGTATCAAGGGATTTCCTGGTGCTTTCTCACGTAGGTTTT
GTCCGTTGCCTTGCAATCGCGTCCTATTAGTAACGACCAAGTTTATGCCA
CGGGCCCCTATTCTTTCACGTCCGCAGGTGCGCTGCGGTGGGATGTGCGG
CGCAGCCCCGGTGCGGGCGGGAGGGGGACCCTCGCCCCACGTTTTGCCTG
CGCCACGCAGAGCCAGATATGGTCAACTTCAGGTATTACACCGAGACCAT
GTTATACGCCTTCCGTGCTTTCAACGTAACGTGGAAGGTGTCTATTTTTT
TGTACACATCCCCGGATTTTGAGCTTGTTTTGTACTTCTTGAATGACATC
AAAGGAGTATGATTTTTTAAAAAGGGCGGAAGACGTGGAGTTTCACGCGT
TTTGAAAACAACTTCGTGTTTGCACACGATTTTTGTTTGCCCCTTGCGGC
AACTCGCGGTTCTTGTCGCCGTTATGTAAACATACAGCACGGTGGCCAAC
CTGAATTTGGGGCCCTCCAGGGGAAAACATGTTTTTTCTCTCGTCAACGT
CAACCCGTTGCCGACTTGACGCTTGTGAGCATGGATTGTTTGCAGTTTTC
GAGGTTGACTCACGAGTACACATGTACCCATTCGGATGTTCGCTGCTATG
CCCAGATTTGTGGCGTGATCAACGAACGTCCAAAATGACTTGATGGCAAC
CACGCAAGGAGCACTCCCCTTCCGGTCACCCCTTTGCCCGTTAGCACTCC
TCGTTTTGACGGCATTCTCACGTACGCCTGTCGCTGGCCGCACTCTCTCA
GGTCAGCAGGCTATCGAGACCGAGACCGAGAACAGGCGCCGCCACCTAAA
AGGAGAAAGGCCGCCATGTCATCGCCGGCCCCTTCGCGGTAAAAAGTTGT
CCGGGGGATGGGCGGCCTCGAGTAAGGCGAATGGCGGAGGGGATAGGGAC
AACAGCAGAAACATACCTTGATGAAAGCACGATTCAACGCCCCCGGTGTG
ATGGATGCACAAGCGTGGGGAAGGGAGAACAATAGTTTAACCTTGATGAA
AAACAGGAAGCCTTGGTCGTGATTGTATCACCCCCGGCGTGATGAATGCA
CAAGCTTGGAGCTAGGTGCGCCGTTTGGTCGGTCTGTTTTCGGTTTTGTT
GGACGTTGGTTGGTGCGAAGGCCGGCCGGCCGGTCGGTCACTGTGAGCTA
CGGCCGCACTCGTTAAGTAGTTTGCTGTGCTCATTTCGATTTGGAATCGT
TTGACTAAGTTTTGCAGGCTGCCGTTTGCTTGATGTTTTTGGGCGGGGTG
ACACGCGTGCCCGGTCAAGTGCGTGAGCGTGTTTCGGTTTTATTCGTTTT
CCGTCAGTGTATGGGGTGTGCCTTTTGCCCCTACCGCTTGTTTTTTGGGT
ATCCCTTTGAGAGACCCTCCGCCATCGCGTGCGGTACATAATCAAATCGA
GTAAAATAAGCGCGTGTCACTTCTCAGTTCCTTTGAC back to topCoding sequence (CDS) from alignment at E-fasciculatus_F_contig1515:8361..12347+ >mRNA_E-fasciculatus_F_contig1515.3650.1 ID=mRNA_E-fasciculatus_F_contig1515.3650.1|Name=mRNA_E-fasciculatus_F_contig1515.3650.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2148bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1515:8361..12347+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGCTATGCATAGGAAAGAGATGACAACCTGGACATCACCTCTGCAACC
GCAGGTGCAGCAACGGCAGCAGCCAGAGCCACCACCTTTCCCCGTTAAAA
GAGGTTTCCTCAAGGGCACGGGGGGAATGGCAGTCGCAAACGCGAAGACG
GCGCCCTCCAAACCGAGATGGCTATGCATAGGAAAGAGATGACAACCTGG
ACATCACCTCTGCAACCGCAGGTGCAGCAACGGCAGCAGCCAGAGCCACC
ACCTTTCCCCGTTAAAAGAGGTTTCCTCAAGGGCACGGGGGGAATGGCAG
TCGCAAACGCGAAGACGGCGCCCTCCAAACCGAGATGTCGTAAGGTCGGT
GCCCGGTGCCGGTTCGAGGGCTGCACTGGGCGTCCTTGGTTCGCGCAGCC
GGGCTCCCGAGTCCCAAGGGCATGCAAGGCCCACAAGGAAGAGGGGGAGG
TCAACGTTTACGCGCCAGCCTGCGAAGCGGATGGGTGCACGACGAGGCCG
CACTACGGCGTGGACGGCGGGCGGGCGAGGTTCTGTTGCAAGCACAAGAT
GTCGTAAGGTCGGTGCCCGGTGCCGGTTCGAGGGCTGCACTGGGCGTCCT
TGGTTCGCGCAGCCGGGCTCCCGAGTCCCAAGGGCATGCAAGGCCCACAA
GGAAGAGGGGGAGGTCAACGTTTACGCGCCAGCCTGCGAAGCGGATGGGT
GCACGACGAGGCCGCACTACGGCGTGGACGGCGGGCGGGCGAGGTTCTGT
TGCAAGCACAAGCTTGACGGGATGGTGGATGTGCTCAACAAACGCTGTGC
GACGAAAGGGTGCCGAAGGCAGCCGAGCTGGGCAAGAGAAAGAGGAGCTC
GAGCTCTTTTCTGCAAGCTTGACGGGATGGTGGATGTGCTCAACAAACGC
TGTGCGACGAAAGGGTGCCGAAGGCAGCCGAGCTGGGCAAGAGAAAGAGG
AGCTCGAGCTCTTTTCTGCAAGGAGCACAAAGAGGACGGCATGGTGGACA
CGAAGCACAAGACGTGCTTACACCCGGGCTGCACGCGGTTTCCCTCCAAA
AGCGGTGCCGCCGCAACGACCATGCCGCATCCCTCCCAGGAGAACGCACA
CGGACCCACACAATCGTCACCAGCGCCCGCAGAAACAGCGGCGGGGGCGG
CGGCGGGAGCAGCAACAGCGGCGGTCCACCCGGGACCAGCGAGGTACTGC
GCCGCGCACGCTCCGACGGGAGCCGCAAACGTGACCGCTAGCAGGTGCCG
GCACCCCGGCGGCTGCTCCGTGCAGCCGTACTTCGGGCGGGAGGGAGGGG
GGCAGCAGCCAGAGTTCTGCGCTCTGCACCGGAAGCCGGGGATGACGGAC
ATCCGGAACCCCAGGAGCACAAAGAGGACGGCATGGTGGACACGAAGCAC
AAGACGTGCTTACACCCGGGCTGCACGCGGTTTCCCTCCAAAAGCGGTGC
CGCCGCAACGACCATGCCGCATCCCTCCCAGGAGAACGCACACGGACCCA
CACAATCGTCACCAGCGCCCGCAGAAACAGCGGCGGGGGCGGCGGCGGGA
GCAGCAACAGCGGCGGTCCACCCGGGACCAGCGAGGTACTGCGCCGCGCA
CGCTCCGACGGGAGCCGCAAACGTGACCGCTAGCAGGTGCCGGCACCCCG
GCGGCTGCTCCGTGCAGCCGTACTTCGGGCGGGAGGGAGGGGGGCAGCAG
CCAGAGTTCTGCGCTCTGCACCGGAAGCCGGGGATGACGGACATCCGGAA
CCCCAGGTGCGCTGCGGTGGGATGTGCGGCGCAGCCCCGGTGCGGGCGGG
AGGGGGACCCTCGCCCCACGTTTTGCCTGCGCCACGCAGAGCCAGATATG
GTCAACTTCAGGTGCGCTGCGGTGGGATGTGCGGCGCAGCCCCGGTGCGG
GCGGGAGGGGGACCCTCGCCCCACGTTTTGCCTGCGCCACGCAGAGCCAG
ATATGGTCAACTTCAGGTCAGCAGGCTATCGAGACCGAGACCGAGAACAG
GCGCCGCCACCTAAAAGGAGAAAGGCCGCCATGTCATCGCCGGCCCCTTC
GCGGTAAGTCAGCAGGCTATCGAGACCGAGACCGAGAACAGGCGCCGCCA
CCTAAAAGGAGAAAGGCCGCCATGTCATCGCCGGCCCCTTCGCGGTAA back to top
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