mRNA_E-fasciculatus_F_contig1503.3564.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1503.3564.1 vs. uniprot
Match: A0A6H5K2C7_9PHAE (AKAP7_NLS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2C7_9PHAE) HSP 1 Score: 358 bits (920), Expect = 2.530e-117 Identity = 183/218 (83.94%), Postives = 192/218 (88.07%), Query Frame = 1
Query: 778 QQAKDTLEHCGDLLLEHDLSPPEVGLQASASITESVPDDGMHSAALGTGEGNETAPGATAATPLTLSFRDLGHFRNKVLFAKLVEDEHATRLRGLVSSLHRRFSEAGLVEEAAGFPSDRGGKRGGXXXXXXXGTSGDSFEFTPHLTIMKTSKLRDRGILIPADSYDQYQSGFVVGHHAPSSVELSSMLKKEDGPSLEGWEPRPYYKCEHRLALCTPAV 1431
QQA+DTLEHCGDLLLEH LSP EV L ASAS TESVPDDGMH AALG G+ NETAPGATAA+PLTLSFRDLGHFRNKVLFAKLVEDE ATRLRGL SSLH+RFSEAGLVE AAGFPS +GGKRG GTS DSFEFTPHLTIMKTSKLRDRG LIPADSYD+YQSGF+VGHHAPSSVELSSML+KED P LEGWEP+PYYKCEHRL LCTP V
Sbjct: 60 QQARDTLEHCGDLLLEHGLSP-EVDLPASASSTESVPDDGMHPAALGIGDSNETAPGATAASPLTLSFRDLGHFRNKVLFAKLVEDEQATRLRGLASSLHQRFSEAGLVEGAAGFPSRKGGKRG--DGGDGSGTSSDSFEFTPHLTIMKTSKLRDRGTLIPADSYDRYQSGFLVGHHAPSSVELSSMLEKEDVPPLEGWEPKPYYKCEHRLDLCTPKV 274
BLAST of mRNA_E-fasciculatus_F_contig1503.3564.1 vs. uniprot
Match: D8LFT6_ECTSI (Similar to A-kinase anchoring protein 18 gamma n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFT6_ECTSI) HSP 1 Score: 343 bits (881), Expect = 8.330e-111 Identity = 184/220 (83.64%), Postives = 192/220 (87.27%), Query Frame = 1
Query: 778 QQAKDTLEHCGDLLLEHDLSPPEVGLQASASITESVPDDGMHSAALGTGEGNETAPGATAATPLTLSFRDLGHFRNKVLFAKLVEDEHATRLRGLVSSLHRRFSEAGLVEEAAGFPSDRGGKRGGXXXXXXXGTSG--DSFEFTPHLTIMKTSKLRDRGILIPADSYDQYQSGFVVGHHAPSSVELSSMLKKEDGPSLEGWEPRPYYKCEHRLALCTPAV 1431
QQA+DTLEHCGDLLLEH LSP EV LQASAS ESVPDD MH AAL G+ NETAPG AA+PL LSFRDLGHFRNK+LFAKLVEDE ATRLRGL SSLHRRFSEAGLVEEAAGFPS +G KRG XXXXXXX DSFEFTPHLTIMKTSKLRDRG LIPADSYD+YQ+GFVVGHHAPSSVELSSML+KED P LEGWEPRPYYKCEHRL LCTPAV
Sbjct: 100 QQARDTLEHCGDLLLEHGLSP-EVDLQASASRAESVPDDHMHPAALAIGDSNETAPGVAAASPLMLSFRDLGHFRNKILFAKLVEDEQATRLRGLASSLHRRFSEAGLVEEAAGFPSRKGEKRGDXXXXXXXXXXXXXDSFEFTPHLTIMKTSKLRDRGTLIPADSYDRYQNGFVVGHHAPSSVELSSMLEKEDVPPLEGWEPRPYYKCEHRLGLCTPAV 318
BLAST of mRNA_E-fasciculatus_F_contig1503.3564.1 vs. uniprot
Match: A0A8C4TGZ9_ERPCA (A-kinase anchor protein 7-like n=1 Tax=Erpetoichthys calabaricus TaxID=27687 RepID=A0A8C4TGZ9_ERPCA) HSP 1 Score: 71.2 bits (173), Expect = 9.270e-10 Identity = 50/155 (32.26%), Postives = 74/155 (47.74%), Query Frame = 1
Query: 964 PLTLSFRDLGHFRNKVLFAKLVEDEHATRLRGLVSSLHRRFSEAGLVEEAAGFPSDRGGKRGGXXXXXXXGTSGDSFEFTPHLTIMKTS---KLRDRGIL-IPADSYDQYQSGFVVGHHAPSSVELSSMLKKEDGPSLEGWEPRPYYKCEHRLAL 1416
PL L F +GHFRN+V+F K+VE E +L+ + L R F E G++ +GDS +F PHLT MK S KLR +GI + Y +++ G+ +++L SMLKK+ +P YY CE + +
Sbjct: 187 PLLLPFHGIGHFRNEVVFVKMVEAEDFLKLKKITEVLRRAFEEKGIL-------------------------AGDSKDFKPHLTFMKLSRAPKLRSQGIKKLDPKLYKNFENQN-FGNEKLVNLDLCSMLKKK--------QPNGYYHCEASITV 307
BLAST of mRNA_E-fasciculatus_F_contig1503.3564.1 vs. uniprot
Match: UPI0019649A51 (A-kinase anchor protein 7 isoform X2 n=1 Tax=Polypterus senegalus TaxID=55291 RepID=UPI0019649A51) HSP 1 Score: 68.6 bits (166), Expect = 1.590e-8 Identity = 49/154 (31.82%), Postives = 73/154 (47.40%), Query Frame = 1
Query: 967 LTLSFRDLGHFRNKVLFAKLVEDEHATRLRGLVSSLHRRFSEAGLVEEAAGFPSDRGGKRGGXXXXXXXGTSGDSFEFTPHLTIMKTS---KLRDRGIL-IPADSYDQYQSGFVVGHHAPSSVELSSMLKKEDGPSLEGWEPRPYYKCEHRLAL 1416
L L F +GHFRN+V+F K+VE E +L+ + L R F E G++ +GDS +F PHLT MK S KLR +GI + Y +++ G+ +++L SMLKK+ +P YY CE + +
Sbjct: 292 LILPFHGIGHFRNEVVFVKMVEAEDFLKLKKITEVLRRAFEEKGIL-------------------------AGDSKDFKPHLTFMKLSRAPKLRSQGIKKLDPKLYKNFENQN-FGNEKLVNLDLCSMLKKK--------QPNGYYHCEASITV 411
BLAST of mRNA_E-fasciculatus_F_contig1503.3564.1 vs. uniprot
Match: UPI00196263FF (A-kinase anchor protein 7 isoform X1 n=4 Tax=Polypteridae TaxID=8289 RepID=UPI00196263FF) HSP 1 Score: 68.6 bits (166), Expect = 1.620e-8 Identity = 49/154 (31.82%), Postives = 73/154 (47.40%), Query Frame = 1
Query: 967 LTLSFRDLGHFRNKVLFAKLVEDEHATRLRGLVSSLHRRFSEAGLVEEAAGFPSDRGGKRGGXXXXXXXGTSGDSFEFTPHLTIMKTS---KLRDRGIL-IPADSYDQYQSGFVVGHHAPSSVELSSMLKKEDGPSLEGWEPRPYYKCEHRLAL 1416
L L F +GHFRN+V+F K+VE E +L+ + L R F E G++ +GDS +F PHLT MK S KLR +GI + Y +++ G+ +++L SMLKK+ +P YY CE + +
Sbjct: 292 LILPFHGIGHFRNEVVFVKMVEAEDFLKLKKITEVLRRAFEEKGIL-------------------------AGDSKDFKPHLTFMKLSRAPKLRSQGIKKLDPKLYKNFENQN-FGNEKLVNLDLCSMLKKK--------QPNGYYHCEASITV 411
BLAST of mRNA_E-fasciculatus_F_contig1503.3564.1 vs. uniprot
Match: A0A8C4TJ37_ERPCA (A-kinase anchor protein 7-like n=1 Tax=Erpetoichthys calabaricus TaxID=27687 RepID=A0A8C4TJ37_ERPCA) HSP 1 Score: 63.2 bits (152), Expect = 3.570e-7 Identity = 58/200 (29.00%), Postives = 83/200 (41.50%), Query Frame = 1
Query: 964 PLTLSFRDLGHFRNKVLFAKLVEDEHATR-LRGLVSSLHRRFSEAGLVEEAAGFPSDRGGKRGGXXXXXXXGTSGDSFEFTPHLTIMKTS---KLRDRGIL-IPADSYDQYQSGFVVGHHAPSSVELSSMLKKEDGPSLEGWEPRPYYKCEHRLALCTPAV*VVFESNLCHHVFFRGGERRQS*RVHACQLSLRCAPSHT 1548
PL L F +GHFRN+V+F K+VE E + + + R F E G++ +GDS +F PHLT MK S KLR +GI + Y +++ G+ +++L SMLKK+ +P YY CE + + +V C G R S Q C P HT
Sbjct: 135 PLLLPFHGIGHFRNEVVFVKMVEAEDFLKHMAAHLEFAKRAFEEKGIL-------------------------AGDSKDFKPHLTFMKLSRAPKLRSQGIKKLDPKLYKNFENQN-FGNEKLVNLDLCSMLKKK--------QPNGYYHCEASITVGKLDCGMVMGQLECKPGTIPGQGTRAS------QGEPTCTPMHT 294 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1503.3564.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1503.3564.1 >prot_E-fasciculatus_F_contig1503.3564.1 ID=prot_E-fasciculatus_F_contig1503.3564.1|Name=mRNA_E-fasciculatus_F_contig1503.3564.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=273bp MKTLLGHQRLGNFHERSPAWCIGTQLWSTRRPNAYHQLTFFGEPSITHSFback to top mRNA from alignment at E-fasciculatus_F_contig1503:3187..4998+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1503.3564.1 ID=mRNA_E-fasciculatus_F_contig1503.3564.1|Name=mRNA_E-fasciculatus_F_contig1503.3564.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1812bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1503:3187..4998+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1503:3187..4998+ >mRNA_E-fasciculatus_F_contig1503.3564.1 ID=mRNA_E-fasciculatus_F_contig1503.3564.1|Name=mRNA_E-fasciculatus_F_contig1503.3564.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1638bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1503:3187..4998+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |