mRNA_E-fasciculatus_F_contig14971.3524.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14971.3524.1 vs. uniprot
Match: D7G3U9_ECTSI (ATP-dependent DNA helicase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U9_ECTSI) HSP 1 Score: 912 bits (2357), Expect = 2.200e-304 Identity = 572/982 (58.25%), Postives = 618/982 (62.93%), Query Frame = 2
Query: 65 WVFGYNDFASFRDLMDRTPARYTELAQYLDNIIFNQVATLADITRVMHGAVEGTSTLPVGDTCQKDPNHRHAKECLPTAPPTDCFQRDGEDRCPIHDQAYARLMYLDLAEITPGANLHKCQATCTKYNHLNSCRFGYGEEGKPLVAETVVKRGRCVFDTKGQH------------------------------------------DYRWSRVFRSLNRRCRRRCIHSSLPESFR*VHCNTHRGRRTAGSVVR*VQRR------YSSSAQPHQQLQPCHPVCHSE*HGPQGFAPGQRRQRN----------------SLLHLKLQHQN*ANFGRFAAPSCASSGTDSGRRRRIGRQRTCRAPCEILPLQTAIQS*HWRAGGC*QSARHAGPQDLPPPRAMPNVTIA---DVGI--FKRRPSGC*HQSSGR*ERQRHGRPYGR*CQHHTIQREANGGATCVLAVPQSLPSW*HRPRTSR-DVLRL----LAQACPRR-TV*PAGQQKTGPPPVFRCVRP*LRL*HRAAGRPC*PLRTTCTFPG-GETPRVSV*LRWGVQAQVATGSAGETGDGQHHARHTAQGHSTRRALPSSSLQFVPFFTLDNPKATGMLAQKLAAAEENAKRESQNASFNASPDQQQDNSDKAEVHLCDYGDDEPGRSVIPTSARRLETEFFVNDALRSFLAAGFSGDDSLPDTAFPLLSGRTRQQTMEDASKITLGTEVPASTLSVARQESLLEQKSTSCASSMADVAQPVSSPSYSTGTDGGPRIQPYLIQLRDASHEGLSDQARGERGARRLATNATVFNTEVGRTSSLPHSVAVSIAQEFGLNRKQRLAFFIFANGLLAQSRPNPPEALRIYIGGGAGTGKSHVLKAIKAFIECQAIAAKVPRGRLLTVAYQGKQAASVGGTTVHSVCSTGSRDGGNLSGDHDYQSSLPETKAMHWKGVSVLAIEEVSMVGCNLLVQLHKAACSMFPLHKAKPFGNR 2782
WVFGYNDFASFRDLMDRTPARYTELAQYLDNIIFNQVATLADITRVMHG VEG STLPVGDTCQ DPNHRHAKECLPTAPPT+CF RDGEDRCP+HDQ YARLMYLDLA ITPGANLHKC ATCTKYNHLNSCRFGYGEEGKPLVAETVVKRGRCVFDTKG D R + R +HS + SF V R ++R + + S + Q L P+ P R R+ S L +L N P+ AS D + PC + PL T W C + G P DV I FK + + QR Y C +G S W R R D L LAQ+ T + G P V P R GRP C + GE +W QV + R Q + R L ++PFFTLD+ K TGMLAQKLAAAEE AKRE+QNASF ASPD+QQDNSDKAEVHLCDYGDDEPGRSVIPTSARRL+TEFFVNDALRSFLAAGFSGDDSLP++AFPLLSGRTRQQTMEDAS ITLGT+V ASTL VARQES L+QKSTSCA+SMAD AQPVSSPSYSTGTDGGP +QPYLI+LR AS EGLSDQARGER ARR+ATNA V T+VGRTS+L HSVAVSIAQEFGLNR+QRLAFFIFANGLLAQSRPNPPEALRIYIGGGAGTGKSHVLKAIKAFIEC AIAA+VPRGRLLTVAYQGKQAASVGGTTVHSVCSTGSRDGGNLSGDHD QSSLP+ KAMHWKGVSVLAIEEVSMVGCNLLVQLHKAACSMFP+HKAKPFGNR
Sbjct: 752 WVFGYNDFASFRDLMDRTPARYTELAQYLDNIIFNQVATLADITRVMHGGVEGISTLPVGDTCQTDPNHRHAKECLPTAPPTNCFPRDGEDRCPVHDQDYARLMYLDLAGITPGANLHKCNATCTKYNHLNSCRFGYGEEGKPLVAETVVKRGRCVFDTKGNMIIDGVVYSVHSTDDAAAAASTPAFQTAFDESIATLIGDDGLPDPLSDRFSADIRR------LHSHI-NSFNPVIQFAIRSNMDLKVLLRDSDAKGILFYILNYSTKTEQTLDVLLPL----------LVPVVERIRDEADRVDDKELAVRLVRSCLCKQLSSLN------IGGPAAASKVLDMPDHKISHHP----VPCPMSPLLT------W---ACSRDGPLDGDTSRPDDXXXXXXXXXXXXDVIITPFKGKLTVA----------QRAYLLYRNRCHPDDTGHVLHG---------MSYVFWHKLVRVIRYDPLDNRQPDLAQSSDASDTDSDCDTVQPGDP-----VSPSGRRASARTGRP-----RACRYDFVGEYKH-----KW---QQVLREKPAMVNIMRDIPRKDTQPVAHCRLL---LCMYIPFFTLDDLKTTGMLAQKLAAAEETAKREAQNASFTASPDKQQDNSDKAEVHLCDYGDDEPGRSVIPTSARRLQTEFFVNDALRSFLAAGFSGDDSLPESAFPLLSGRTRQQTMEDASHITLGTDVAASTLFVARQESSLQQKSTSCAASMADDAQPVSSPSYSTGTDGGPPVQPYLIRLRAASQEGLSDQARGERDARRVATNAAVAQTDVGRTSNLQHSVAVSIAQEFGLNRRQRLAFFIFANGLLAQSRPNPPEALRIYIGGGAGTGKSHVLKAIKAFIECPAIAAEVPRGRLLTVAYQGKQAASVGGTTVHSVCSTGSRDGGNLSGDHDDQSSLPDAKAMHWKGVSVLAIEEVSMVGCNLLVQLHKAACSMFPIHKAKPFGNR 1657
BLAST of mRNA_E-fasciculatus_F_contig14971.3524.1 vs. uniprot
Match: A0A6H5KIB1_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIB1_9PHAE) HSP 1 Score: 481 bits (1238), Expect = 3.670e-143 Identity = 406/1129 (35.96%), Postives = 510/1129 (45.17%), Query Frame = 2
Query: 65 WVFGYNDFASFRDLMDRTPARYTELAQYLDNIIFNQVATLADITRVMHGAVEGTSTLPVG--DTCQK--DPNHRHAKECLPTAPPTDCFQRDGEDRCPIHDQAYARLMYLDLAEITPGANLHKCQATCTKYNHLNS-------------CRFGYGEEGKPLVAETVVKRGRCVFDTKGQ---------HDYRWSRVFRSLNRRCR----------RRCIHSSLPES--FR*VHCNTHRGRRTAGSVVR*VQRR--------------------YSSSAQPHQQLQPCHPVCH---SE*HGPQGFAPGQRRQRNSLLHLKLQHQN*ANFGRFAAPSCASSGTDSGRRRRIGRQRTCRAPCEILPLQTAIQS*HWRAGGC*QSARHAGPQDLPPPRAMPNVTIADVGIF--------------------KRRPSGC*H---QSSG-------R*ER--QRHGRPYGR*CQHHTIQREANG--------------GATCVLAVPQSLPSW*HRPRTSRDVLRLLAQACPRRTV*PAGQQKTGPPPVFRCVRP*LRL*HRAAGRPC*PLRTTCTFPGG----ETPRVSV*LRWGVQAQVATGSAGETGDGQHHARHTAQGHSTRRALPSSS--------------------------------------LQFVPFFTLDNPKAT-----------------------------GMLAQKLAAAEENAKRESQNASFNASPDQQQDNSDKAEVHLCDYG-DDEPGRSVIPTSARRLETEFFVNDALRSFLAAGFSGDDSLPDTAFPLLSGRTRQQTMEDASKITLGTEVPASTLSVARQESLLEQ------------------------------------------KSTSCASSMA--DVAQPVSSPSYSTGTDGGPRIQPYLIQLRDASHEGLSDQARGERGARRLATNATVFNTEVGRTSSLPHSVAVSIAQEFGLNRKQRLAFFIFANGLLAQSRPNPPEALRIYIGGGAGTGKSHVLKAIKAFIECQAIAAKVPRGRLLTVAYQGKQAASVGGTTVHSVCSTGSRDGGNLSGDHDYQSSLPETKAMHWKGVSVLAIEEVSMVGCNLLVQLHKAACSMFPLHKAKPFGNR 2782
W++GYNDF SFR LMD+TP RYTELA+YLDNI+FNQ+ATLADI RVM G VG D+ Q DP R AKEC+P P F GE AYARLMYLDLA +TPGANLHKCQATC KYNH +S CRFG+G++G+PL ETVV+RGRCVFDT G H + N + R+ + S P S F H H + V+ R + + + Q L P+ G AP + + + + G AA S +D + PC + PL T W + + P D D G+ + RP H Q S R E+ HGRP G+ Q A G G C+ P S PS R ++R R +A R + Q K + VR L PL T TF E P +S + V T + A G S+ P S FVPFFTLD+ K GMLAQKLAAAEE AKR ++ + PD DN +V L YG +DEPG SVIP + RR+ T+ FV+DA R+F+AAGF+GD S PD + PLLSGR+ + D S + GT++ A+T ++RQE+ LE KS+S AS++A D + S S G I+PY+I+LR AS +GLS +A R RR TNA V +T++G ++L H A SIAQEFGLNRKQR AF+IFANGLLAQ RP+PP ALR+YIGGGAGTGK+HVL+AI+AF++ + +PR RLL VA+QGKQAA+VGGTTVHSVC G LSG H+ QS+LP +KA HWKG VLAIEE+SM+ CNLLV+LH ACSMFPLHK +PFGNR
Sbjct: 816 WIYGYNDFVSFRALMDKTPRRYTELARYLDNIVFNQIATLADINRVMRGVDPAHLPPEVGNHDSAQPALDPLLRDAKECMPVPPARSTFPPQGEPPDEDLRDAYARLMYLDLACVTPGANLHKCQATCHKYNHKDSTRXXXXXXXXXXXCRFGFGDDGRPLAQETVVQRGRCVFDTSGNMTIDGVVYSHSSADDAAAAAANAAFQEAFDNAVADVRQELARSDPVSGRFSVEHKRLHTHINSFNPVIAFAVRSNMDIKVLLKGSDAKGLLYYILNYATKTEQTLDVLLPLLIPVVERIRADSGDAPEKEMAVRLVRSCLCKQLSSLPIGGPAAASKVLGLSDE-------KLSHSPVPCPMTPLLT------WASKRDKPADADNSPGDDXXXXXXXXXXXDDSGVIITPFQGKLTVAQRTHLLYRSRCRPDDTEHPLHQKSYFAWCREVRIEKCPTLHGRPRGK-------QPSARGNDDDDVDDVDDGHPGDECLDDDPVS-PSG--RTASTRAPRRGRPRAT-RYELVGEYQNKWEQGALHPYVRTRLY-----------PLCTCLTFARTHIVREKPAIS-----NIIKDVPTSDT----------QPVAHGFSSFPLFPCLSSARRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXARLLICMFVPFFTLDDLKRADETWPDALRRADDDNRWDPGTYPFRLNIEGMLAQKLAAAEETAKRRAERQLLSEKPDTLGDNV-AGDVLLDSYGGEDEPGESVIPATVRRMLTDLFVDDAFRTFVAAGFNGDGSSPDGSSPLLSGRSMEDACRDISFVCGGTDLEAATAFISRQENELENIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSSSSASALAGSDSHTTTAGSSNSIGVPKEDPIEPYIIELRKASQDGLSPEACRARDERRDRTNAEVADTDIGAVAALQHVAAFSIAQEFGLNRKQRQAFYIFANGLLAQCRPDPPPALRLYIGGGAGTGKTHVLRAIRAFVDSPPVKRLLPRARLLCVAFQGKQAAAVGGTTVHSVCPNTDDSDGCLSGAHEGQSTLPASKAAHWKGDVVLAIEEISMISCNLLVRLHNTACSMFPLHKGQPFGNR 1893
BLAST of mRNA_E-fasciculatus_F_contig14971.3524.1 vs. uniprot
Match: A0A6H5L0L4_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0L4_9PHAE) HSP 1 Score: 455 bits (1170), Expect = 2.020e-136 Identity = 253/400 (63.25%), Postives = 286/400 (71.50%), Query Frame = 3
Query: 468 LAMGKKGSHLSLKPS*NEDDAFSTRRGNMTIDGVVFSVHSTDDAAAAASTPAFQKVFDESIATLIGDDGLPDPLSDRFSADIRRLHNHINSFNPVIQFAIRSNMDLKVLLRDSDAKGILFYILNYSTKTEQTLDVLLPLLVPVVERIRDDADGSDDKELAVRLVRSCLCKQLSSLNIGGPAAASKVLDMPDHKISHHPVPCPMSPLLTWASSRDGPLDADTSRPDDESDSDTEDPMDGDVSI--TPFKGKLTVAQRAYLLYRNRCRPGDTGHVLHGMSYVFWHKLVRVERYDPLDNKKPDPPQSSDASDPDSDCDTVQPGDPVSPC---------------ARRAPSRAGRRRACRYDFVGEYKHKWQQVLREKPAMVNIMRGIPRKDTQPVAHCRLLLC 1616
G KG L K GNMTI+G+V+S S DAAAAAS AF+ FD SIA L+ D+GLPDPLSDRF+A++RRLH+HINSFNPVIQFAIRSNMDLK+LLRDSDAKG+LFYILNYSTKTEQTLDVLLPLL PV ERIR+ +DG+ +KELAVRLVRSCLCKQLSSL+IGGPAAASKV D+PDH+ISH VPC MSPLLTWA+SRDGPLD + R DD SD + D + SI TPFKGKLTVAQR YLLY RC P DT + +HGMSYV WHKLVR+ER P N P +D SD DS+ GD A R P+R GR RA R FVG++K+KW QV+REK AMVNIMR IPR DTQPVAH RLLLC
Sbjct: 885 FGFGDKGKPLVQKTVVQRGRCVFDTDGNMTINGIVYSWSSAKDAAAAASNEAFRAAFDASIAHLVNDNGLPDPLSDRFTAELRRLHSHINSFNPVIQFAIRSNMDLKILLRDSDAKGLLFYILNYSTKTEQTLDVLLPLLAPVAERIREQSDGAPEKELAVRLVRSCLCKQLSSLSIGGPAAASKVFDLPDHRISHPTVPCSMSPLLTWATSRDGPLDGEVDRVDDSSDXXXXNDSDVEESIIITPFKGKLTVAQRVYLLYLKRCDPNDTTNPVHGMSYVVWHKLVRLERCLPGRNH----PAPTDRSDDDSESS----GDDXPXXXXXIGXXXXXXXDVPATRRPAR-GRPRANRLRFVGDFKNKWHQVMREKTAMVNIMRDIPRADTQPVAHARLLLC 1275
BLAST of mRNA_E-fasciculatus_F_contig14971.3524.1 vs. uniprot
Match: A0A6H5K8N9_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8N9_9PHAE) HSP 1 Score: 404 bits (1037), Expect = 3.030e-120 Identity = 228/372 (61.29%), Postives = 260/372 (69.89%), Query Frame = 3
Query: 468 LAMGKKGSHLSLKPS*NEDDAFSTRRGNMTIDGVVFSVHSTDDAAAAASTPAFQKVFDESIATLIGDDGLPDPLSDRFSADIRRLHNHINSFNPVIQFAIRSNMDLKVLLRDSDAKGILFYILNYSTKTEQTLDVLLPLLVPVVERIRDDADGSDDKELAVRLVRSCLCKQLSSLNIGGPAAASKVLDMPDHKISHHPVPCPMSPLLTWASSRDGPLDADTSRPDDESDSDTEDPMDGDVSI--TPFKGKLTVAQRAYLLYRNRCRPGDTGHVLHGMSYVFWHKLVRVERYDPLDNKKPDPPQSSDASDPDSDCDTVQPGDPVSPC---------------ARRAPSRAGRRRACRYDFVGEYKHKWQQVLR 1532
G KG L K GNMTI+G+V+S S DAAAAAS AF+ FD SIA L+ D+GLPDPLSDRF+A++RRLH+HINSFNPVIQFAIRSNMDLK+LLRDSDAKG+LFYILNYSTKTEQ LDVLLPLL PV ERIR+ +DG+ +KELAVRLVRSCLCKQLSSL+IGGPAAASKV D+PDH+ISH VPC MSPLLTWA+SRDGPLD + R DD SD + D + SI TPFKGKLTVAQR YLLY RC P DT + +HGMSYV WHKLVR+ER P N P +D SD DS+ GD A R P+R GR RA R FVG++K+KW QV R
Sbjct: 805 FGFGDKGKPLVQKTVVQRGRCVFDTDGNMTINGIVYSWSSAKDAAAAASNEAFRAAFDASIAHLVNDNGLPDPLSDRFTAELRRLHSHINSFNPVIQFAIRSNMDLKILLRDSDAKGLLFYILNYSTKTEQNLDVLLPLLAPVAERIREQSDGAPEKELAVRLVRSCLCKQLSSLSIGGPAAASKVFDLPDHRISHPTVPCSMSPLLTWATSRDGPLDGEVDRVDDSSDXXXXNDSDVEESIIITPFKGKLTVAQRVYLLYLKRCDPNDTTNPVHGMSYVVWHKLVRLERCLPGRNH----PAPTDRSDDDSESS----GDDXPXXXXXIGXXXXXXXDVPATRRPAR-GRPRANRLRFVGDFKNKWHQVPR 1167
BLAST of mRNA_E-fasciculatus_F_contig14971.3524.1 vs. uniprot
Match: A0A6H5KXW4_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXW4_9PHAE) HSP 1 Score: 345 bits (885), Expect = 4.800e-102 Identity = 207/421 (49.17%), Postives = 266/421 (63.18%), Query Frame = 2
Query: 1619 FVPFFTLDNPKAT-----------------------------GMLAQKLAAAEENAKRESQNASFNASPDQQQDNSDKAEVHLCDYG-DDEPGRSVIPTSARRLETEFFVNDALRSFLAAGFSGDDSLPDTAFPLLSGRTRQQTMEDASKITLGTEVPASTLSVARQESLLEQKSTSCASSM--ADVAQPVSSPSYSTGTDGGPRIQPYLIQLRDASHEGLSDQARGERGARRLATNATVFNTEVGRTSSLPHSVAVSIAQEFGLNRKQRLAFFIFANGLLAQSRPNPPEALRIYIGGGAGTGKSHVLKAIKAFIECQAIAAKVPRGRLLTVAYQGKQAASVGGTTVHSVCSTGSRDGGNLSGDHDYQSSLPETKAMHWKGVSVLAIEEVSMVGCNLLVQLHKAACSMFPLHKAK-PFGNR 2782
FVPFFTLD+ K GMLAQKLAAAEE AKR ++ + DN +V L YG +DEPG SVIP + RR+ T+ FVNDA R+F+AAGF+GD S D + PLLSGR+ + T D S + GT++ A+T S++RQE+ +D + ++ S S G + P +++LR AS +GLS +A R RR TNA V T++G ++L H A +IAQEFGLNRKQR AF+IFANGLL+Q RP+PP ALR+YIGGGAGTGK+HVL+AI+AF++ + +PR RLL VA+QGKQAA+VGGTTVHSVC G LSG H+ QS+LP ++A HW+ +LAIEE SM+ CNLLV+LH ACSMFPLHK + PFGNR
Sbjct: 26 FVPFFTLDDLKRADETWPDALRRADDKNRWDPGTYPFRLNIQGMLAQKLAAAEETAKRHAERQLLSEKTHALGDNM-AGDVLLDSYGGEDEPGESVIPATVRRMLTDLFVNDAFRTFVAAGFNGDGSTRDASSPLLSGRSMEDTCLDISFVRGGTDLEAATASMSRQENXXXXXXXXXXXXXXGSDSNRTPAASSSSFGVPNEDPLGPCIMELRKASQDGLSPEACRARDERRDRTNAEVAGTDIGAVAALQHVAAFTIAQEFGLNRKQRQAFYIFANGLLSQFRPDPPPALRLYIGGGAGTGKTHVLRAIRAFVDSPPVKRLLPRARLLCVAFQGKQAAAVGGTTVHSVCPNTGDSYGCLSGAHEGQSTLPASEAAHWQRDVILAIEESSMISCNLLVRLHNTACSMFPLHKGQQPFGNR 445
BLAST of mRNA_E-fasciculatus_F_contig14971.3524.1 vs. uniprot
Match: A0A6H5JN07_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN07_9PHAE) HSP 1 Score: 341 bits (874), Expect = 2.730e-95 Identity = 294/941 (31.24%), Postives = 425/941 (45.16%), Query Frame = 2
Query: 65 WVFGYNDFASFRDLMDRTPARYTELAQYLDNIIFNQVATLADITRVMHG--------AVEGTSTLPVGDTCQKDPNHRHAKECLPTAPPTDCFQRDGEDRCPIHDQAYARLMYLDLAEITPGANLHKCQATCTKYNHLNSCRFGYGEEGKPLVAETVVKRGRCVFDTKGQHDYRW--------SRVFRSLNRRCRRRCIHSSLPESFR*VHCNTH--RGRRTAGSVVR*VQRRYSSSAQPHQQLQPCHPVCHSE*HGPQGFAPGQRRQRNSLLHLKLQHQN*ANFG------RFAAPSCASSGTDSGRRR--RIGRQRTCRAPCEILPLQTAIQS*HWRAGGC*QSARHAGPQDLPPPRAMPNVTIADVGIFKRRPSGC*HQSSGR*ERQRHGRPYGR*CQHHTIQREANGGATCVLAVPQSLPSW*HRPRTSRDVLRLLAQACPRRTV*PAGQQKTGPPPVFRCVRP*LRL*HRAAGRPC*PLRTTCTFPGGETPRVSV*LRWGVQAQVATGSAGETGDGQHHARHTAQGHSTRRALPSSSLQFVPFFTLDNPKATGMLAQKLAAAEENAK---RESQNASFNASPDQQQDNSDKA---EVHLCDYGDDE-PGRSVIPTSARRLETEFFVNDALRSFLAAGFSGDDSLPDTAFPLLSGRTRQQTMEDASKITLGTEVPASTLSVARQESLLEQKSTSCASSMADVAQPVSSPSYSTGT-DGGPRI-QPYLIQLRDASHEGLSDQARGERGARRLATNATVFNTEVGRTSSLPHSVAVSIAQEFGLNRKQRLAFFIFANGLLAQSRPNPPEALRIYIGGGAGTGKSHVLKAIKAFIECQAIAAKVPRGRLLTVAYQGKQAASVGGTTVHSVCSTGSRD-GGNLSGDHDYQSSLPETKAMHWKGVSVLAIEEVSMVGCNLLVQLHKAACSMFPLHKAKPFGN 2779
WV+GYNDF+ FR+LMD++P +Y +LA++L+ +IFNQVATL D G A E T T G DP H AKE + PPT CF RDG DRC +HD+A++RL+YLDLAEITP +LHKCQ C K+NH +SCRFGYG++GK ET V RG C F T G S + +S+ E +CN++ R TA V RR + P + P + S + LK+ ++ G +A + S ++ + R+ R C+ + A S + + + + P + A A R + C + E H Y + ++R G + CV +R T D P+ T G+ + P + CV + + R + P +T + + H R F+PFF L N K + + E++ ++ N +A D++ ++ L +YGDD+ SVIP +A L T+ V D +LP ++ SGR+ + D +KIT + T +A+QE LE + S +S+A+ +T + + P++ PYL++LR AS EFGLNRKQRLAFF+F+NG+LA+ ++LR+YIGGGA +GKSHVLKA+KAFIEC A+ ++ R+L VA++G+QAA+VGGTT+HSVC G + G+LS +HD QS + +T+A+HWKGV++LA+EEVSMVGC LLV L+KAACSMFP+HK KPFGN
Sbjct: 760 WVYGYNDFSIFRELMDKSPEKYNKLARFLEQVIFNQVATLTDTNLAFDGHEYEHMSRASEDTGTSEAGP----DPQHVAAKERIARPPPTACFPRDGVDRCRVHDEAFSRLVYLDLAEITPAVSLHKCQLACNKFNHRDSCRFGYGKDGKAFEQETAVLRGPCTFHTNGNMTINGVVYPPGDPSTSSGIAAAAAFQAAFDASISELDDGDNCNSNPKADRFTA------VLRRLGAHINP--------------------YNPFIQFVIRSNMDLKVLLEDIDAKGIMFYILNYATKTANESQGETSKEMVVRLVRSCLCKQLASLSFGGPAAASKVFDLSDA-KISLYTSPCPMGSLIAFGGKLTAKQRSHLRYRNRCDRTDT---EHPLHCVSYVVWHRPVRVERYTPGASNCV-----------NRSDTDNDSSDDDMDE-PQHTPQRRGRASSDP---YDCVGKYRKKWIQVVRRKAVMVNIMRDIPRADTQQ------------------------EDHCRLLL-------------CMFLPFFDLSNLKNSDESWESAMQRVEDSDSWDKQRANKENDAPMSHSLDDAGHGAENDIFLIEYGDDDNDSASVIPETAIGLRTKIVV--------------DTALPVRSWHPRSGRSTEDVETDLTKITSWSGSSDPTY-MAQQEKCLEAMTESEVASLAESTSXXXXXXXTTDSHEYDPKVLDPYLLELRSASQA------------------------------------------EFGLNRKQRLAFFVFSNGMLAKKVSPGSDSLRLYIGGGAKSGKSHVLKAMKAFIECPALVGQIEDSRMLAVAFRGQQAAAVGGTTIHSVCQVGRKTFRGSLSRNHDDQSPMKDTQAIHWKGVNMLAVEEVSMVGCELLVALNKAACSMFPMHKDKPFGN 1557
BLAST of mRNA_E-fasciculatus_F_contig14971.3524.1 vs. uniprot
Match: A0A6H5K882_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K882_9PHAE) HSP 1 Score: 293 bits (750), Expect = 2.100e-79 Identity = 166/332 (50.00%), Postives = 196/332 (59.04%), Query Frame = 3
Query: 681 DPLSDRFSADIRRLHNHINSFNPVIQFAIRSNMDLKVLLRDSDAKGILFYILNYSTKTEQTLDVLLPLLVPVVERIRDDADGSDDKELAVRLVRSCLCKQLSSLNIGGPAAASKVLDMPDHKISHHPVPCPMSPLLTWASSRDGPLDADTSRPDDESDSDTEDPMDGD--------------------VSITPFKGKLTVAQRAYLLYRNRCRPGDTGHVLHGMSYVFWHKLVRVERYDPLDNKKPDPPQSSDASDPDSDCDTVQPGDPVSPCARRAPSRAGRRRACRYDFVGEYKHKWQQVLREKPAMVNIMRGIPRKDTQPVAHCRLLLC 1616
+P SDRF+A +R L HIN +NP+I F IRSNMDL V+LRDSDA+G+L+Y+L+YSTK+EQTLDVLLPLL+PVV+RIRD +G KE AVRLVRSCLCKQL+SLNIGGPAAASKV +PD KISH VPCPM PLL WASSRD P E+P DGD V ++ G+LTV Q A++LY +RC P DT H LHGMSYV W +LVR ERY P F Y + Q+V+R+ P MVNIMR IPR DT+P AHCRLLLC
Sbjct: 627 EPESDRFTATLRLLSTHINPYNPIIHFLIRSNMDLNVMLRDSDARGLLYYVLHYSTKSEQTLDVLLPLLLPVVQRIRDHNEGEPAKETAVRLVRSCLCKQLTSLNIGGPAAASKVFGLPDAKISHTTVPCPMGPLLAWASSRDTP---------------DEEPDDGDSTSGDXXXXXXXXXSDDQHGVVVSVVGGRLTVNQWAHVLYLHRCSPEDTEHALHGMSYVSWTRLVRTERYTP--------------------------------------------------FKKAYNCR-QRVMRQGPVMVNIMRDIPRSDTKPEAHCRLLLC 892
BLAST of mRNA_E-fasciculatus_F_contig14971.3524.1 vs. uniprot
Match: A0A6H5J5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5A5_9PHAE) HSP 1 Score: 242 bits (618), Expect = 7.060e-63 Identity = 154/378 (40.74%), Postives = 191/378 (50.53%), Query Frame = 3
Query: 546 GNMTIDGVVFSVHSTDDAAAAASTPAFQKVFDESIATLIGDDGLPDPLSDRFSADIRRLHNHINSFNPVIQFAIRSNMDLKVLLRDSDAKGILFYILNYSTKTEQTLDVLLPLLVPVVERIRDDADGSDDKELAVRLVRSCLCKQLSSLNIGGPAAASKVLDMPDHKISHHPVPCPMSPLLTWASSRDGPLDADTSRPDDESDSDTEDPMDGD--------------------VSITPFKGKLTVAQRAYLLYRNRCRPGDTGHVLHGMSYVFWHKLVRVERYDPLDNKKPDPPQSSDASDPDSDCDTVQPGDPVSPCARRAPSRAGRRRACRYDFVGEYKHKWQQVLREKPAMVNIMRGIPRKDTQPVAHCRLLLCS 1619
G MTI GVV+ A + + AFQ F+E ++ +P SDRF+A +RRL HIN +NP+I F IRSNMD KV+LRDSDA+G+L+Y+L+YSTK+EQTLDVLLPLL VV+R R + +G KE AVRLVRSCLCKQL+SLNI GPAAASKV +PD KISH PC M P L WA SRD P E+P DGD V ++ G+LTV QRA++LY +RC L+++ PC V+R+ P MVNIMR IPR DT+P AHCRLLLC+
Sbjct: 657 GGMTISGVVYPPGDPSTAESMVAAQAFQNAFNECVSVA------SEPESDRFTATVRRLSTHINPYNPIIHFLIRSNMDSKVMLRDSDARGLLYYVLHYSTKSEQTLDVLLPLLFLVVQRKRCEKEGEPAKETAVRLVRSCLCKQLTSLNIDGPAAASKVFGLPDAKISHTTAPCSMRPSLAWAPSRDAP---------------DEEPDDGDSTSGDXXXXXXXXASDDQHGVVVSVVGGRLTVNQRAHVLYLHRC-------------------LLKIRSM---------------------------------PCT---------------------------VMRQGPVMVNIMRDIPRSDTKPEAHCRLLLCT 934
BLAST of mRNA_E-fasciculatus_F_contig14971.3524.1 vs. uniprot
Match: A0A6H5JT57_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT57_9PHAE) HSP 1 Score: 242 bits (617), Expect = 9.800e-63 Identity = 278/980 (28.37%), Postives = 397/980 (40.51%), Query Frame = 2
Query: 107 MDRTPARYTELAQYLDNIIFNQVATLADITRVMHGAVEGTSTLPVGDTC-QKDPNHRHAKECLPTAPPTDCFQRDGEDRCPIHDQAYARLMYLDLAEITPGANLHKCQATCTKYNHLNSCRFGYGEEGKPLVAETVVKRG-RCVF------------------DTKGQHDYRWSRVFRSLNRRC-------RRRCIHSSLPESFR*VHCNTHRGRRTAGSVVR*VQR----------------------RYSSSAQPHQQ-----LQPCHPVCHSE*HGPQGFAPGQRRQR----NSLLHLKLQHQN*ANFGRFAAPSCASSGTDSGRRRRIGRQRTCRAPCE-ILPLQTAIQS*HWRAGGC*QSARHAGPQDLPPPRA-MPNVTIADVGIFKRRPSGC*HQSSGR*ERQRHGRPYGR*CQHHTIQREANGGATCVLAVPQSLPSW*HRPRTSRDVLRLLAQACPRRTV*PAGQQKTGPPPVFRCVRP*LRL*HRAAGRPC*PLRTTCTFPGGETP-RVSV*LRWGVQAQVATGSAGETGDGQHHARHTA-------QGHSTRRALPSS---SLQFVPFFTLDNPKAT-------GMLAQKLAAAEENA---------KRESQNASFNASPDQQQDNSDKAEVHLCDYGDDEP-GRSVIPTSARRLETEFFVNDALRSFLAAGFS--GDDSLPDTAFPLLSGRTRQQTMEDASKITLGTEVPASTLSVARQESLLEQKSTSCASSMADVAQPVSSPSYSTGTDGGPRIQPYLIQLRDASHEGLSDQARGERGARRLATNATVFNTEVGRTSSLPHSVAVSIAQEFGLNRKQRLAFFIFANGLLAQSRPNPPEALRIYIGGGAGTGKSHVLKAIKAFIECQAIAAKVPRGRLLTVAYQGKQAASVGGTTVHSVCSTGSRDGGNLSGDHDYQSSLPETKAMHWKGVSVLAIEEVSMVGCNLLVQLHKAACSMFPLHKAKPFG 2776
MD+TP Y ELA +L IF+QVA+ D+ M G +E ++ G +DP R A E + PP+ CF G +R D+ Y + +LAEIT AN+H+C TC K+ H NSCRFG+G++GKPL + T V+RG R ++ D D ++ + + R + +++ E F H HR + ++ R YS+ + L P E G + R ++ H+ + AP+ AS + RTC P + +L L +A A G ++A + I + K R S H+ Y R C + + +G V A L + PR + RR ++ R GR PL F G T + V + + + ++HA+ + H R +S +L+ L + ++T GML Q+ AA EEN +R A A D ++ D D +P G +V+P + +VN+A+ L AGFS +D LP A LLSGR+ Q DASK ++LL+ + T A+++ D A V++ T + PYL LR S GLS A+ RR TN V T+VGR+S H IA EFGLNRKQRLAFFIF +A+ P ALR+++ GGAG+GKS+VL+AI A I+C A+ V G LLTVA+QGK AA+VGG TVHSV ++ + Q+ L E KA W + LAIEEVSMV C L LHKAA S+ P + PF
Sbjct: 1 MDKTPDSYQELASFLSRTIFSQVASDEDVQHAMTGGIEPSNAPEDGTPPPSRDPLKRPATETIAMPPPSACFPPPGVERDVAADEQYLGPLRAELAEITKAANMHQCTYTCHKHGHANSCRFGFGKDGKPLESRTCVQRGFRQIYPNGDSVVGGVLYSASQSRDAIAAADAAAAKEEEEIQKFADESDDVSRGKLDFATVAERFTAKHRREHRKVNSYNLIIAFCTRSNMDIKALLRDSDARGALFYILNYSTKTETTMDALLNVLAPVVERIKDEAEGAPAAVTAAQLVRACSCKTVAHMPV-----------GAPAAASKVLGYTDAKSAPDARTC--PMKPLLALASASFDALPPAEGSNENADXXXXXXXXXXXXDYHSGAILNTSGGKIRISISLHEL------------YLRRCLPNDTEHPYHGMCYAVWA---RLVRIENTPRKQKPA---------RRPNDDNDRESGXXXXXXXXXXXXXXAARRKRGR---PLAKRHDFVGLPTVHKQQVTREEPILINIMRDVPKQDTQPENHAQLLLCLYKPFFKIHDLRLPDEASWAVALRRTEESGLWDQRSTSMRINIKGMLRQRHAADEENRASSVLQSLRRRRPLGACGGADID--------GDIFGADVDDTDPAGPNVMPPARNAHRVSAYVNNAVDRCLDAGFSRTDNDRLPQAA--LLSGRSSHQIAADASK-----------------DALLKTRETEAATAVPDDAPDVAA----TKPYNADALSPYLRDLRSKSEAGLSKDAKDRMDRRRKETNEAVAKTDVGRSSPQQHDAVRRIADEFGLNRKQRLAFFIFGAAWIARDGVPTPNALRLHVSGGAGSGKSYVLRAIVALIDCPALKGVVQPGGLLTVAFQGKAAANVGGNTVHSVADVPRKNNDGAMDNTIGQTGLSEAKAARWTHAAALAIEEVSMVSCLQLGSLHKAAVSVRPSSASLPFA 909
BLAST of mRNA_E-fasciculatus_F_contig14971.3524.1 vs. uniprot
Match: A0A6H5KTA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA2_9PHAE) HSP 1 Score: 190 bits (482), Expect = 1.640e-45 Identity = 120/305 (39.34%), Postives = 159/305 (52.13%), Query Frame = 3
Query: 468 LAMGKKGSHLSLKPS*NEDDAFSTRRGNMTIDGVVFSVHSTDDAAAAASTPA------FQKVFDESIATLIGDDGLPDPLSDRFSADIRRLHNHINSFNPVIQFAIRSNMDLKVLLRDSDAKGILFYILNYSTKTEQTLDVLLPLLVPVVERIRDDADGSDDKELAVRLVRSCLCKQLSSLNIGGPAAASKVLDMPDHKISHHPVPCPMSPLLTWASSRDGPLDADTSRPDDESDSDTEDPMD------------GDVSITPFKGKLTVAQRAYLLYRNRCRPGDTGHVLHGMSYVFWHKLVRVE 1328
GK G L + G+ + GV++S + DA AAA A QK DES G +++RF+A RR H +NS+N +I F RSNMD+K LLRDSDA+G LFYILNYSTKTE T+D LL +L PVVERI+D+A+G+ A +LVR+C CK ++ + +G PAAASKVL+ D K + CPM PLL AS+ L P E ++ D + GK+ ++ + LY RC P DT H HGM Y W +LVR+E
Sbjct: 2994 FGFGKDGKPLESRTCVQRGFRQIYPNGDSVVGGVLYSASQSRDAIAAADAAAAKEEEEIQKFADESDDVSRGKLDFA-TVAERFTAKHRREHRKVNSYNLIIAFCTRSNMDIKALLRDSDARGALFYILNYSTKTETTMDALLNVLAPVVERIKDEAEGAPAAVTAAQLVRACSCKTVAHMPVGAPAAASKVLEYTDAKSAPDARTCPMKPLLALASASFDAL------PPAEGSNENADXXXXXXXXXXXXDYHSGAILNTSGGKIRISISLHELYLRRCLPNDTEHPYHGMCYAVWARLVRIE 3291 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14971.3524.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14971.3524.1 >prot_E-fasciculatus_F_contig14971.3524.1 ID=prot_E-fasciculatus_F_contig14971.3524.1|Name=mRNA_E-fasciculatus_F_contig14971.3524.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=374bp MLAQKLAAAEENAKRESQNASFNASPDQQQDNSDKAEVHLCDYGDDEPGRback to top mRNA from alignment at E-fasciculatus_F_contig14971:2..3165- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14971.3524.1 ID=mRNA_E-fasciculatus_F_contig14971.3524.1|Name=mRNA_E-fasciculatus_F_contig14971.3524.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3164bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14971:2..3165- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14971:2..3165- >mRNA_E-fasciculatus_F_contig14971.3524.1 ID=mRNA_E-fasciculatus_F_contig14971.3524.1|Name=mRNA_E-fasciculatus_F_contig14971.3524.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2244bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14971:2..3165- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |