mRNA_E-fasciculatus_F_contig14893.3481.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14893.3481.1 vs. uniprot
Match: A0A6H5JI18_9PHAE (PAO protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI18_9PHAE) HSP 1 Score: 425 bits (1092), Expect = 1.250e-140 Identity = 226/270 (83.70%), Postives = 234/270 (86.67%), Query Frame = 1
Query: 76 NSPRQYPQVNGINLNANNGGSTTNAAISPDGRREDRVGAFLHRRVREILRAGGDGSGGGCGIDEGILGFLVRKQHAVEGCDDLDVVSVAGYGMYEELEGGDVRVPGGFSRVVEALAAKISPERMRLQSPVMRVQWASQGQQEGRQDSPFADSHPCVVEYQYPTRRYSSGGIGVRGEHDHSGRVPTRRIRCRRVLVTVGLGVLK-----DGTALAFSPPLPPAKMSAIRRLGFGTADKFFVRCTRKGSAGSGRVGPDPSLNVGVLRPIDQQ 870
NSPRQ PQVNGI+ N NNGGST NAAIS D RREDRVGAFLHRRVREILRAGG GS GGC IDE ILG+LVRKQ AVEGCDDLDVVSVAGYGMYEELEGGDVRVPGGF RVVEALAAKISP R+RLQSPV RVQWASQGQQE R+DSPFA+SHPCVVEY TRR+SSGGI V GE HS RV T RIRCRRVLVTVGLGVLK DG AL FSPPLP AK++AIRRLGFGTADKFFVRCTRKGSAGSGR GPD SLNVGVLRPI QQ
Sbjct: 296 NSPRQDPQVNGISQNVNNGGSTPNAAISSDSRREDRVGAFLHRRVREILRAGG-GSSGGCVIDEDILGYLVRKQQAVEGCDDLDVVSVAGYGMYEELEGGDVRVPGGFFRVVEALAAKISPGRIRLQSPVSRVQWASQGQQE-RRDSPFAESHPCVVEY--TTRRHSSGGIDVGGEQGHSDRVLTMRIRCRRVLVTVGLGVLKNRDVQDGMALTFSPPLPQAKLAAIRRLGFGTADKFFVRCTRKGSAGSGRAGPDASLNVGVLRPIHQQ 561
BLAST of mRNA_E-fasciculatus_F_contig14893.3481.1 vs. uniprot
Match: D7G835_ECTSI (Similar to peroxisomal n1-acetyl-spermine/spermidine oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G835_ECTSI) HSP 1 Score: 384 bits (986), Expect = 1.400e-128 Identity = 198/239 (82.85%), Postives = 209/239 (87.45%), Query Frame = 1
Query: 67 TATNSPRQYPQVNGINLNANNGGSTTNAAISPDGRREDRVGAFLHRRVREILRAGGDGSGGGCGIDEGILGFLVRKQHAVEGCDDLDVVSVAGYGMYEELEGGDVRVPGGFSRVVEALAAKISPERMRLQSPVMRVQWASQGQQEGRQDSPFADSHPCVVEYQYPTRRYSSGGIGVRGEHDHSGRVPTRRIRCRRVLVTVGLGVLKDGTALAFSPPLPPAKMSAIRRLGFGTADKFFVR 783
T NSPRQ P V GI+ N NNGGST N +S D RREDRVGAFLH RVREILRAGG GS GGCGIDE ILG+LVRKQHAVEGCDDLDVVSVAGYGMYEELEGGDVRVPGGFSRVVEALAAKISPER+RLQSPV RVQWASQGQQE R++SPFA+SHPCVVEY TRR+SSGGI V GE DHS V T RIRCRRVLVTVGLGVLKDGTAL FSPPLP AK++AIRR+GFGTADKFFVR
Sbjct: 254 TVPNSPRQDPHVKGISDNVNNGGSTPNVVMSADSRREDRVGAFLHLRVREILRAGG-GSSGGCGIDEDILGYLVRKQHAVEGCDDLDVVSVAGYGMYEELEGGDVRVPGGFSRVVEALAAKISPERIRLQSPVTRVQWASQGQQEERRESPFAESHPCVVEY--TTRRHSSGGIDVGGEQDHSDLVSTMRIRCRRVLVTVGLGVLKDGTALTFSPPLPQAKLAAIRRVGFGTADKFFVR 489
BLAST of mRNA_E-fasciculatus_F_contig14893.3481.1 vs. uniprot
Match: UPI0018E4EB4E (peroxisomal N(1)-acetyl-spermine/spermidine oxidase n=2 Tax=Coliadinae TaxID=42450 RepID=UPI0018E4EB4E) HSP 1 Score: 96.3 bits (238), Expect = 1.510e-18 Identity = 56/186 (30.11%), Postives = 87/186 (46.77%), Query Frame = 1
Query: 271 ILGFLVRKQHAVEGCDDLDVVSVAGYGMYEELEGGDVRVPGGFSRVVEALAAKISPERMRLQSPVMRVQWASQGQQEGRQDSPFADSHPCVVEYQYPTRRYSSGGI----GVRGEHDHSGRVPTRRIRC--------RRVLVTVGLGVLKDGTALAFSPPLPPAKMSAIRRLGFGTADKFFVRCTR 792
I L++++ + GC+ +D + + G Y EL+GG++ +P G+SR++E L ISP+++ PV ++ W + G + D DS V+E T G V E R + C V+ T+ LGVLKD + F P LP KM +I RL F DK ++ R
Sbjct: 175 IFDCLLKRETCISGCNSMDEIDLLELGSYTELQGGNILIPSGYSRILEPLTKNISPDKIMSNHPVSKIIWNTNGNSDDFGDE-SEDSDQTVIEDISKTSAPDQTGQLNRPSVESEDKPKKRTHLVEVHCDNGESYYANHVICTIPLGVLKDSASTLFEPSLPQYKMESIERLLFSAVDKIYLEYER 359
BLAST of mRNA_E-fasciculatus_F_contig14893.3481.1 vs. uniprot
Match: A0A0L7L6U0_9NEOP (Peroxisomal n1-acetyl-spermine/spermidine oxidase (Fragment) n=1 Tax=Operophtera brumata TaxID=104452 RepID=A0A0L7L6U0_9NEOP) HSP 1 Score: 95.1 bits (235), Expect = 3.660e-18 Identity = 56/187 (29.95%), Postives = 92/187 (49.20%), Query Frame = 1
Query: 271 ILGFLVRKQHAVEGCDDLDVVSVAGYGMYEELEGGDVRVPGGFSRVVEALAAKISPERMRLQSPVMRVQWASQGQQEGRQD--SPFADSHPCVVEYQYPTRRYSSGGIGVR-GEHDHSGRVPT----------RRIRCRRVLVTVGLGVLKDGTALAFSPPLPPAKMSAIRRLGFGTADKFFVRCTR 792
I L++++ + GC+ +D + + G Y EL+GG++ +P G+S ++E L I+P+++ PV ++ W S+G G +D DS V+E T + G G + H + T ++I V+ T+ LGVLK+ A F P LP K+ +I RL F DK F+ R
Sbjct: 175 IFDCLLKRETCISGCNSMDEIDLLELGSYNELQGGNIIIPSGYSSILEPLTKNIAPDKILSNHPVSKIVWDSEGHT-GLEDLGEESEDSDQTVIEDISKTSTLENPGEGTSLTDASHKPKKKTNYVTVLCDNGKKINANHVICTIPLGVLKEQAAKLFEPSLPQYKIESIERLLFSAVDKIFLEYER 360
BLAST of mRNA_E-fasciculatus_F_contig14893.3481.1 vs. uniprot
Match: A0A4X1V609_PIG (Polyamine oxidase n=9 Tax=Suidae TaxID=9821 RepID=A0A4X1V609_PIG) HSP 1 Score: 89.0 bits (219), Expect = 4.700e-16 Identity = 60/199 (30.15%), Postives = 91/199 (45.73%), Query Frame = 1
Query: 184 VGAFLHRRVREILRAGGDGSGGGCGIDEGILGFLVRKQHAVEGCDDLDVVSVAGYGMYEELEGGDVRVPGGFSRVVEALAAKISPERMRLQSPVMRVQWASQGQQEGRQDSPFADSHPCVVEYQYPTRRYSSGGIGVRGEHDHSGRVPTRRIRCRRVLVTVGLGVLKDGTALAFSPPLPPAKMSAIRRLGFGTADKFFV 780
VG +L +++RE + + +G G + IL L + V G +D+V++A +G Y L G D PGG+ + + +AA + + M PV ++W Q+ F P +VE + GG V+VTV LG LK F PPLPP K+ AIR++GFGT +K F+
Sbjct: 156 VGEYLKKQIREHVASWAEGEGTKM-LKLAILNNLFNVECCVSGTHSMDLVALAPFGEYTVLPGLDCTFPGGYQGLTDRMAASLPTDVMVFDKPVKTIRWNGSFQEASAPGEAF----PVLVECE-------DGGC----------------FPAHHVIVTVPLGFLKGHLDTFFEPPLPPEKVEAIRKIGFGTNNKIFL 326
BLAST of mRNA_E-fasciculatus_F_contig14893.3481.1 vs. uniprot
Match: A0A026WZG3_OOCBI (Peroxisomal N(1)-acetyl-spermine/spermidine oxidase n=1 Tax=Ooceraea biroi TaxID=2015173 RepID=A0A026WZG3_OOCBI) HSP 1 Score: 87.4 bits (215), Expect = 1.470e-15 Identity = 61/217 (28.11%), Postives = 98/217 (45.16%), Query Frame = 1
Query: 199 HRRVREILRAGGDGSGGGCGIDEGILGFLVRKQHAVEGCDDLDVVSVAGYGMYEELEGGDVRVPGGFSRVVEALAAKISPERMRLQSPVMRVQWASQGQQEGRQDSPFADSHPCVVEYQYPTRRYSSGGIGVRGEHDHSGRVPTRRIRCRRVLVTVGLGVLKDGTALAFSPPLPPAKMSAIRRLGFGTADKFFVRCTRKGSAGSGRVGPDPSLNVGV 849
HRR+R++ I L++++ V GCD++D V + G Y+EL+GG++ +P G+S ++E ++ I +R+ + V +++W Q++ +P A+S + + G + EH V+ T+ LGVLK F P LP K+ AI RL FGT DK F+ R P LN GV
Sbjct: 165 HRRIRQL-----------------IFDCLLKRETCVTGCDNMDEVDLLEMGSYDELQGGNISLPNGYSAILEPVSKHIPKDRILTKHVVTKIRW----QEQKHPHNPEAESDSTLNSL---LQVQCDNGKTITAEH---------------VICTLPLGVLKRTAQDLFEPSLPAYKLEAIDRLMFGTVDKIFLEYDR------------PFLNPGV 330
BLAST of mRNA_E-fasciculatus_F_contig14893.3481.1 vs. uniprot
Match: A0A0E0N1I5_ORYRU (Amino_oxidase domain-containing protein n=1 Tax=Oryza rufipogon TaxID=4529 RepID=A0A0E0N1I5_ORYRU) HSP 1 Score: 86.3 bits (212), Expect = 1.770e-15 Identity = 63/209 (30.14%), Postives = 90/209 (43.06%), Query Frame = 1
Query: 193 FLHRRVREILRAGGDGSGGGC--GIDEGILGFLVRKQHAVEGCDDLDVVSVAGYGMYEELEGGDVRVPGGFSRVVEALAAKISPERMRLQSPVMRVQWASQGQQEGRQDSPFADSHPCVVEYQYPTRRYSSGGIGVRGEHDHSGRVPTRRIRCRRVLVTVGLGVLK-----------DGTALAFSPPLPPAKMSAIRRLGFGTADKFFV 780
+ ++ R ++ A G GG +DE +L + ++ DDL + + G Y + G V +PGG+SRVVE LAA + P +RL + R++W GG VR H G P + V++TV LGVLK A+AF PPLPP K A+ RLGFG +K F+
Sbjct: 1 MVAKKPRVVVAARSAGGGGKELEEVDEALLAMHINRERTDTSADDLGDLDLTAEGEYRDFPGEHVTIPGGYSRVVERLAAALPPGTVRLGLRLRRLKW---------------------------------GGTPVR-LHFADGAPP---LTADHVILTVSLGVLKASLGNKDTAGVGAAAIAFDPPLPPFKREAVARLGFGVVNKLFM 172
BLAST of mRNA_E-fasciculatus_F_contig14893.3481.1 vs. uniprot
Match: A0A8J5RB65_ZIZPA (Amino_oxidase domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5RB65_ZIZPA) HSP 1 Score: 87.0 bits (214), Expect = 1.880e-15 Identity = 58/186 (31.18%), Postives = 82/186 (44.09%), Query Frame = 1
Query: 259 IDEGILGFLVRKQHAVEGCDDLDVVSVAGYGMYEELEGGDVRVPGGFSRVVEALAAKISPERMRLQSPVMRVQWASQGQQEGRQDSPFADSHPCVVEYQYPTRRYSSGGIGVRGEHDHSGRVPTRRIRCRRVLVTVGLGVLK------------DGTALAFSPPLPPAKMSAIRRLGFGTADKFFV 780
++E +L + ++ DDL +++ G Y + G V +PGG+SRVVE LAA + P +RL + R++W GG VR H G P + V++TV LGVLK G A+AF PPLPP K A+ RLGFG +K F+
Sbjct: 166 VEEALLAMHINRERTDTSADDLGDLNLTAEGEYRDFPGEHVTIPGGYSRVVEQLAAALPPGTVRLGLCLRRLEW---------------------------------GGTPVR-LHFADGAPP---LNADHVILTVSLGVLKASLSMDGSGAGGSGAAIAFEPPLPPFKREAVARLGFGVVNKLFM 314
BLAST of mRNA_E-fasciculatus_F_contig14893.3481.1 vs. uniprot
Match: A0A6P3WZE2_DINQU (spermine oxidase isoform X2 n=3 Tax=Ponerini TaxID=141711 RepID=A0A6P3WZE2_DINQU) HSP 1 Score: 87.0 bits (214), Expect = 2.010e-15 Identity = 60/193 (31.09%), Postives = 90/193 (46.63%), Query Frame = 1
Query: 271 ILGFLVRKQHAVEGCDDLDVVSVAGYGMYEELEGGDVRVPGGFSRVVEALAAKISPERMRLQSPVMRVQWASQGQQEGRQDSPFADSHPCVVEYQYPTRRYSSGGIGVRGEHDHSGRVPTRRIRCRRVLVTVGLGVLKDGTALAFSPPLPPAKMSAIRRLGFGTADKFFVRCTRKGSAGSGRVGPDPSLNVGV 849
I L++++ V GCD +D V + G Y+EL+GG++ +P G+S ++E +A + R+ + V +++W Q ++ S A S T S G+ +GR I + V+ T+ LGVLK F P LP K+ AI RL FGT DK F+ R P LN GV
Sbjct: 172 IFDCLLKRETCVTGCDTMDEVDLLEMGSYDELQGGNISLPDGYSAILEPVAKHVPKNRILTKHAVTKIRWQKQ-----KRSSVSAGS----------TEELESNVDGLVEVQCENGRT----ISAQHVVCTLPLGVLKRTAQDMFEPSLPAHKLEAIDRLMFGTVDKIFLEYDR------------PFLNPGV 333
BLAST of mRNA_E-fasciculatus_F_contig14893.3481.1 vs. uniprot
Match: A0A6P3WYW3_DINQU (peroxisomal N(1)-acetyl-spermine/spermidine oxidase isoform X1 n=1 Tax=Dinoponera quadriceps TaxID=609295 RepID=A0A6P3WYW3_DINQU) HSP 1 Score: 87.0 bits (214), Expect = 2.080e-15 Identity = 60/193 (31.09%), Postives = 90/193 (46.63%), Query Frame = 1
Query: 271 ILGFLVRKQHAVEGCDDLDVVSVAGYGMYEELEGGDVRVPGGFSRVVEALAAKISPERMRLQSPVMRVQWASQGQQEGRQDSPFADSHPCVVEYQYPTRRYSSGGIGVRGEHDHSGRVPTRRIRCRRVLVTVGLGVLKDGTALAFSPPLPPAKMSAIRRLGFGTADKFFVRCTRKGSAGSGRVGPDPSLNVGV 849
I L++++ V GCD +D V + G Y+EL+GG++ +P G+S ++E +A + R+ + V +++W Q ++ S A S T S G+ +GR I + V+ T+ LGVLK F P LP K+ AI RL FGT DK F+ R P LN GV
Sbjct: 192 IFDCLLKRETCVTGCDTMDEVDLLEMGSYDELQGGNISLPDGYSAILEPVAKHVPKNRILTKHAVTKIRWQKQ-----KRSSVSAGS----------TEELESNVDGLVEVQCENGRT----ISAQHVVCTLPLGVLKRTAQDMFEPSLPAHKLEAIDRLMFGTVDKIFLEYDR------------PFLNPGV 353 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14893.3481.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14893.3481.1 >prot_E-fasciculatus_F_contig14893.3481.1 ID=prot_E-fasciculatus_F_contig14893.3481.1|Name=mRNA_E-fasciculatus_F_contig14893.3481.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=307bp QQQQQQQQQHLAPKRLEAAATTTATNSPRQYPQVNGINLNANNGGSTTNAback to top mRNA from alignment at E-fasciculatus_F_contig14893:19..3179+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14893.3481.1 ID=mRNA_E-fasciculatus_F_contig14893.3481.1|Name=mRNA_E-fasciculatus_F_contig14893.3481.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3161bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14893:19..3179+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14893:19..3179+ >mRNA_E-fasciculatus_F_contig14893.3481.1 ID=mRNA_E-fasciculatus_F_contig14893.3481.1|Name=mRNA_E-fasciculatus_F_contig14893.3481.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1842bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14893:19..3179+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |